Guide to the Human Genome
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Name: SH2D4B Sequence: fasta or formatted (309aa) NCBI GI: 224591408
Description:

SH2 domain containing 4B isoform 2

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [357aa] SH2 domain containing 4B isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         28           3
 C cysteine            0.6          2           1
 D aspartate           3.6         11           1
 E glutamate          15.2         47           4
 F phenylalanine       2.6          8           1
 G glycine             5.5         17           2
 H histidine           3.2         10           2
 I isoleucine          3.6         11           1
 K lysine              6.5         20           2
 L leucine             8.4         26           2
 M methionine          1.3          4           1
 N asparagine          1.0          3           1
 P proline             4.9         15           1
 Q glutamine           5.8         18           1
 R arginine           12.3         38           3
 S serine              4.9         15           2
 T threonine           2.9          9           1
 V valine              3.9         12           2
 W tryptophan          3.2         10           1
 Y tyrosine            1.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH2 domain containing 4B isoform 2 
SH2D4B                0.951   SH2 domain containing 4B isoform 1 
SH2D4A                0.214   SH2 domain containing 4A 
CALD1                 0.074   caldesmon 1 isoform 1 
LOC440243             0.064   PREDICTED: Putative golgin subfamily A member 6-lik...
INCENP                0.061   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.061   inner centromere protein antigens 135/155kDa isofor...
TCHH                  0.061   trichohyalin 
GIGYF2                0.059   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.059   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.059   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.059   GRB10 interacting GYF protein 2 isoform b 
LOC727832             0.058   golgi autoantigen, golgin subfamily a-like 
LOC283767             0.058   golgi autoantigen, golgin subfamily a-like 
LOC645202             0.056   PREDICTED: hypothetical protein LOC645202 
TNIK                  0.056   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.056   TRAF2 and NCK interacting kinase isoform 1 
LOC100133758          0.054   PREDICTED: hypothetical protein, partial 
TNIK                  0.051   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.051   TRAF2 and NCK interacting kinase isoform 5 
LOC400352             0.051   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.051   PREDICTED: similar to Putative golgin subfamily A m...
MAP7D2                0.049   MAP7 domain containing 2 
ENAH                  0.048   enabled homolog isoform a 
ENAH                  0.048   enabled homolog isoform b 
MAP7                  0.048   microtubule-associated protein 7 
WDR87                 0.048   NYD-SP11 protein 
CHAF1A                0.046   chromatin assembly factor 1, subunit A (p150) 
C2orf77               0.046   hypothetical protein LOC129881 
LOC283685             0.046   PREDICTED: golgi autoantigen, golgin subfamily a-li...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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