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Search of human proteins with 224465238
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
(394 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 835 0.0
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ... 54 2e-07
gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ... 54 2e-07
gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo ... 54 2e-07
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 53 5e-07
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 53 5e-07
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 53 5e-07
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 51 2e-06
gi|169214061 PREDICTED: hypothetical protein [Homo sapiens] 50 3e-06
gi|169214437 PREDICTED: hypothetical protein [Homo sapiens] 50 3e-06
gi|169213353 PREDICTED: hypothetical protein [Homo sapiens] 50 3e-06
gi|209954781 neurotrophic factor artemin isoform 1 precursor [Ho... 48 1e-05
gi|209954776 neurotrophic factor artemin isoform 1 precursor [Ho... 48 1e-05
gi|50511941 EMI domain containing 1 [Homo sapiens] 48 1e-05
gi|27735129 hypothetical protein LOC148345 [Homo sapiens] 47 3e-05
gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo ... 47 4e-05
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 47 4e-05
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] 47 4e-05
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] 47 4e-05
gi|19924097 synapsin I isoform Ib [Homo sapiens] 47 4e-05
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 47 4e-05
gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ... 46 5e-05
gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo ... 46 7e-05
gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens] 46 7e-05
gi|209954778 neurotrophic factor artemin isoform 3 precursor [Ho... 46 7e-05
gi|209977029 neurotrophic factor artemin isoform 3 precursor [Ho... 46 7e-05
>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
Length = 394
Score = 835 bits (2156), Expect = 0.0
Identities = 394/394 (100%), Positives = 394/394 (100%)
Query: 1 MPSGWSSGLIQTRTPGPARARLLCFQEHGWVVLLPGRPSSWGRSLADPPSSSQALHSPAR 60
MPSGWSSGLIQTRTPGPARARLLCFQEHGWVVLLPGRPSSWGRSLADPPSSSQALHSPAR
Sbjct: 1 MPSGWSSGLIQTRTPGPARARLLCFQEHGWVVLLPGRPSSWGRSLADPPSSSQALHSPAR 60
Query: 61 QVHLVWLLRSRGFREIKERAQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRG 120
QVHLVWLLRSRGFREIKERAQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRG
Sbjct: 61 QVHLVWLLRSRGFREIKERAQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRG 120
Query: 121 GVDLPATPGGPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPA 180
GVDLPATPGGPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPA
Sbjct: 121 GVDLPATPGGPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPA 180
Query: 181 GRPHGPAGRAAPGRRPGCTAQLRAPGRRGRQRLLVHPGGGGRRQWQRLARARRAALLALG 240
GRPHGPAGRAAPGRRPGCTAQLRAPGRRGRQRLLVHPGGGGRRQWQRLARARRAALLALG
Sbjct: 181 GRPHGPAGRAAPGRRPGCTAQLRAPGRRGRQRLLVHPGGGGRRQWQRLARARRAALLALG 240
Query: 241 ALAHLRRCPDTGGGQHLHQLLAPGLCGDGAAVWPAAHAGRPRQLRLVHGPGLGLLCLGGI 300
ALAHLRRCPDTGGGQHLHQLLAPGLCGDGAAVWPAAHAGRPRQLRLVHGPGLGLLCLGGI
Sbjct: 241 ALAHLRRCPDTGGGQHLHQLLAPGLCGDGAAVWPAAHAGRPRQLRLVHGPGLGLLCLGGI 300
Query: 301 QRNPPALSCLDPQPEPPNLWSSESPAGGRERGRLRPRAAEGPTQIAWRQRDAVSGQGLPG 360
QRNPPALSCLDPQPEPPNLWSSESPAGGRERGRLRPRAAEGPTQIAWRQRDAVSGQGLPG
Sbjct: 301 QRNPPALSCLDPQPEPPNLWSSESPAGGRERGRLRPRAAEGPTQIAWRQRDAVSGQGLPG 360
Query: 361 LCSVHSPRRAGLVEKRLMRGPESPSDLQGWGARS 394
LCSVHSPRRAGLVEKRLMRGPESPSDLQGWGARS
Sbjct: 361 LCSVHSPRRAGLVEKRLMRGPESPSDLQGWGARS 394
>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 53.9 bits (128), Expect = 2e-07
Identities = 44/117 (37%), Positives = 48/117 (41%), Gaps = 13/117 (11%)
Query: 143 LRRAGRRRARPPPVPRLPAPRA------PRRPRGPATPDPSPPAGRPHGPAGRAAP---- 192
L RA R PP R PAP A PRRP+G A +PPA P PA AP
Sbjct: 81 LARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPES 140
Query: 193 --GRRPGCTAQL-RAPGRRGRQRLLVHPGGGGRRQWQRLARARRAALLALGALAHLR 246
RP Q R PGR R P GG Q ++ R R A AL H R
Sbjct: 141 QLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQR 197
>gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 53.9 bits (128), Expect = 2e-07
Identities = 44/117 (37%), Positives = 48/117 (41%), Gaps = 13/117 (11%)
Query: 143 LRRAGRRRARPPPVPRLPAPRA------PRRPRGPATPDPSPPAGRPHGPAGRAAP---- 192
L RA R PP R PAP A PRRP+G A +PPA P PA AP
Sbjct: 81 LARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPES 140
Query: 193 --GRRPGCTAQL-RAPGRRGRQRLLVHPGGGGRRQWQRLARARRAALLALGALAHLR 246
RP Q R PGR R P GG Q ++ R R A AL H R
Sbjct: 141 QLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQR 197
>gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 53.9 bits (128), Expect = 2e-07
Identities = 44/117 (37%), Positives = 48/117 (41%), Gaps = 13/117 (11%)
Query: 143 LRRAGRRRARPPPVPRLPAPRA------PRRPRGPATPDPSPPAGRPHGPAGRAAP---- 192
L RA R PP R PAP A PRRP+G A +PPA P PA AP
Sbjct: 81 LARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPES 140
Query: 193 --GRRPGCTAQL-RAPGRRGRQRLLVHPGGGGRRQWQRLARARRAALLALGALAHLR 246
RP Q R PGR R P GG Q ++ R R A AL H R
Sbjct: 141 QLSDRPQSWEQRPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQR 197
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 52.8 bits (125), Expect = 5e-07
Identities = 87/278 (31%), Positives = 101/278 (36%), Gaps = 47/278 (16%)
Query: 68 LRSRGFREIKERAQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRGGVDLPAT 127
LR R + + R+QG GA+ + S AA T + +PQG PQ LPA
Sbjct: 80 LRGRA-KTTRGRSQGAGATETSAGN---SAATAAPHPTPASYPQGTISPPQ-----LPA- 129
Query: 128 PGGPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPA 187
PR + R G R R R V RLP PR + +GP P P+PP R P
Sbjct: 130 ---PRPK---RFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPP-PRPAPPGTRCC-PG 181
Query: 188 GRAAPGRRPGCTAQ--LRAPGRRGRQRLLVHPGGGGRRQWQRLARARRAALLALGALAHL 245
RAA R A LRAP R + PG G AA A AL
Sbjct: 182 ARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLP--------TAAAAAADALWRS 233
Query: 246 RRCPDTGGGQHLHQLLAPGLCGDGAAVWPAAHAGRPRQ--LRLVHGPGLGLLCLGGIQRN 303
RR P L P P H R R+ RL G C G R
Sbjct: 234 RRAP-----------LPPTEFLSPRRTRPRKHPERTRRPAQRLESG------CRGHCSRG 276
Query: 304 PPALSCLDPQPEPPNLWSSESPAGGRERGRLRPRAAEG 341
PAL+ P P L S S A G R R G
Sbjct: 277 APALAPPKLSPPFPCLAQSASRAAGARRALSASRGRRG 314
>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 52.8 bits (125), Expect = 5e-07
Identities = 87/278 (31%), Positives = 101/278 (36%), Gaps = 47/278 (16%)
Query: 68 LRSRGFREIKERAQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRGGVDLPAT 127
LR R + + R+QG GA+ + S AA T + +PQG PQ LPA
Sbjct: 80 LRGRA-KTTRGRSQGAGATETSAGN---SAATAAPHPTPASYPQGTISPPQ-----LPA- 129
Query: 128 PGGPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPA 187
PR + R G R R R V RLP PR + +GP P P+PP R P
Sbjct: 130 ---PRPK---RFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPP-PRPAPPGTRCC-PG 181
Query: 188 GRAAPGRRPGCTAQ--LRAPGRRGRQRLLVHPGGGGRRQWQRLARARRAALLALGALAHL 245
RAA R A LRAP R + PG G AA A AL
Sbjct: 182 ARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLP--------TAAAAAADALWRS 233
Query: 246 RRCPDTGGGQHLHQLLAPGLCGDGAAVWPAAHAGRPRQ--LRLVHGPGLGLLCLGGIQRN 303
RR P L P P H R R+ RL G C G R
Sbjct: 234 RRAP-----------LPPTEFLSPRRTRPRKHPERTRRPAQRLESG------CRGHCSRG 276
Query: 304 PPALSCLDPQPEPPNLWSSESPAGGRERGRLRPRAAEG 341
PAL+ P P L S S A G R R G
Sbjct: 277 APALAPPKLSPPFPCLAQSASRAAGARRALSASRGRRG 314
>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 52.8 bits (125), Expect = 5e-07
Identities = 87/278 (31%), Positives = 101/278 (36%), Gaps = 47/278 (16%)
Query: 68 LRSRGFREIKERAQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRGGVDLPAT 127
LR R + + R+QG GA+ + S AA T + +PQG PQ LPA
Sbjct: 80 LRGRA-KTTRGRSQGAGATETSAGN---SAATAAPHPTPASYPQGTISPPQ-----LPA- 129
Query: 128 PGGPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPA 187
PR + R G R R R V RLP PR + +GP P P+PP R P
Sbjct: 130 ---PRPK---RFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPP-PRPAPPGTRCC-PG 181
Query: 188 GRAAPGRRPGCTAQ--LRAPGRRGRQRLLVHPGGGGRRQWQRLARARRAALLALGALAHL 245
RAA R A LRAP R + PG G AA A AL
Sbjct: 182 ARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLP--------TAAAAAADALWRS 233
Query: 246 RRCPDTGGGQHLHQLLAPGLCGDGAAVWPAAHAGRPRQ--LRLVHGPGLGLLCLGGIQRN 303
RR P L P P H R R+ RL G C G R
Sbjct: 234 RRAP-----------LPPTEFLSPRRTRPRKHPERTRRPAQRLESG------CRGHCSRG 276
Query: 304 PPALSCLDPQPEPPNLWSSESPAGGRERGRLRPRAAEG 341
PAL+ P P L S S A G R R G
Sbjct: 277 APALAPPKLSPPFPCLAQSASRAAGARRALSASRGRRG 314
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 51.2 bits (121), Expect = 2e-06
Identities = 58/161 (36%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 96 SPRFAARLSTSSPFPQGRAQ---RPQRGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRAR 152
+PR AA +T+ P P G AQ R QR L A P P A V AG RRA
Sbjct: 148 APRAAAAAATAPPSP-GPAQPGPRAQRAA-PLAAPPPAPAAPPA-----VAPPAGPRRAP 200
Query: 153 PP-------PVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQLRAP 205
PP P+P P P AP + + P P P PP P G A RA RP ++
Sbjct: 201 PPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPP---PEGGAVRAGGAARPVSLREV--- 254
Query: 206 GRRGRQRLLVHPGGGGRRQWQRLARARRAALLALGALAHLR 246
R L GG G RL R R LL A A R
Sbjct: 255 -----VRYLGGSGGAG----GRLTRGRVQGLLEEEAAARGR 286
Score = 47.4 bits (111), Expect = 2e-05
Identities = 44/131 (33%), Positives = 48/131 (36%), Gaps = 24/131 (18%)
Query: 113 RAQRPQRGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAP------- 165
R Q P+RG PA P PRG A + A PPP P P P AP
Sbjct: 98 RVQPPRRGATP-PAPPRAPRGAPAAAAA----------AAPPPTPAPPPPPAPVAAAAPA 146
Query: 166 RRPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQLRAPGRRGRQRLLVHPGGGGRRQW 225
R PR A +PP+ P A PG R A L AP V P G RR
Sbjct: 147 RAPRAAAAAATAPPSPGP------AQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAP 200
Query: 226 QRLARARRAAL 236
AR L
Sbjct: 201 PPAVAAREPPL 211
Score = 38.9 bits (89), Expect = 0.008
Identities = 36/94 (38%), Positives = 37/94 (39%), Gaps = 21/94 (22%)
Query: 148 RRRARPPPVPRLP--APRAPRRPRGPATPDPSPPAGRPHGPAGRAAPGRRP-GCTAQLRA 204
RR A PP PR P AP A P TP P PP P AAP R P A A
Sbjct: 103 RRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPA----PVAAAAPARAPRAAAAAATA 158
Query: 205 PGRRGRQRLLVHPGGGGRRQWQRLARARRAALLA 238
P G PG RA+RAA LA
Sbjct: 159 PPSPGP----AQPG----------PRAQRAAPLA 178
>gi|169214061 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 50.4 bits (119), Expect = 3e-06
Identities = 63/190 (33%), Positives = 71/190 (37%), Gaps = 29/190 (15%)
Query: 65 VWLLRSRGFREIKERAQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRGGVDL 124
VWLL SR E++ R+ G+S G D P R AA F Q R R +R
Sbjct: 118 VWLL-SRA--EVRPRS-ALGSSRRGLGDKGPRSRRAAE------FTQARPTRKRR----- 162
Query: 125 PATPGGPRGQCA---GRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAG 181
TPGG R + R+AG RA P P P P PA P
Sbjct: 163 --TPGGGRPEAGCWLENRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQ 220
Query: 182 RPHGPAG--RAAPGRRPGCTAQLRAPGRRG--RQRLLVHPGGGGRRQWQRLARARRAALL 237
RPH G R P RRP RA G G R + G G A R A
Sbjct: 221 RPHLSRGQWRLLPRRRPE-----RAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWA 275
Query: 238 ALGALAHLRR 247
LG HLRR
Sbjct: 276 GLGPFWHLRR 285
>gi|169214437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 50.4 bits (119), Expect = 3e-06
Identities = 63/190 (33%), Positives = 71/190 (37%), Gaps = 29/190 (15%)
Query: 65 VWLLRSRGFREIKERAQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRGGVDL 124
VWLL SR E++ R+ G+S G D P R AA F Q R R +R
Sbjct: 118 VWLL-SRA--EVRPRS-ALGSSRRGLGDKGPRSRRAAE------FTQARPTRKRR----- 162
Query: 125 PATPGGPRGQCA---GRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAG 181
TPGG R + R+AG RA P P P P PA P
Sbjct: 163 --TPGGGRPEAGCWLENRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQ 220
Query: 182 RPHGPAG--RAAPGRRPGCTAQLRAPGRRG--RQRLLVHPGGGGRRQWQRLARARRAALL 237
RPH G R P RRP RA G G R + G G A R A
Sbjct: 221 RPHLSRGQWRLLPRRRPE-----RAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWA 275
Query: 238 ALGALAHLRR 247
LG HLRR
Sbjct: 276 GLGPFWHLRR 285
>gi|169213353 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 50.4 bits (119), Expect = 3e-06
Identities = 63/190 (33%), Positives = 71/190 (37%), Gaps = 29/190 (15%)
Query: 65 VWLLRSRGFREIKERAQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRGGVDL 124
VWLL SR E++ R+ G+S G D P R AA F Q R R +R
Sbjct: 118 VWLL-SRA--EVRPRS-ALGSSRRGLGDKGPRSRRAAE------FTQARPTRKRR----- 162
Query: 125 PATPGGPRGQCA---GRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAG 181
TPGG R + R+AG RA P P P P PA P
Sbjct: 163 --TPGGGRPEAGCWLENRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQ 220
Query: 182 RPHGPAG--RAAPGRRPGCTAQLRAPGRRG--RQRLLVHPGGGGRRQWQRLARARRAALL 237
RPH G R P RRP RA G G R + G G A R A
Sbjct: 221 RPHLSRGQWRLLPRRRPE-----RAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWA 275
Query: 238 ALGALAHLRR 247
LG HLRR
Sbjct: 276 GLGPFWHLRR 285
>gi|209954781 neurotrophic factor artemin isoform 1 precursor [Homo
sapiens]
Length = 220
Score = 48.1 bits (113), Expect = 1e-05
Identities = 44/125 (35%), Positives = 49/125 (39%), Gaps = 19/125 (15%)
Query: 87 PWGRWDWSPSPRFAAR--LSTSSPFPQGRAQRPQRGGVDLPATPGGPRGQCAGRSGDVLR 144
PW R + P AA LS+ + G A R P P G G G R
Sbjct: 15 PWPRQQPALWPTLAALALLSSVAEASLGSAPRSPAPREGPPPVLASPAGHLPG--GRTAR 72
Query: 145 RAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQLRA 204
R RPPP P PAP P P+PP+ P G GRAA PG A RA
Sbjct: 73 WCSGRARRPPPQPSRPAP-----------PPPAPPSALPRG--GRAARAGGPGSRA--RA 117
Query: 205 PGRRG 209
G RG
Sbjct: 118 AGARG 122
>gi|209954776 neurotrophic factor artemin isoform 1 precursor [Homo
sapiens]
Length = 220
Score = 48.1 bits (113), Expect = 1e-05
Identities = 44/125 (35%), Positives = 49/125 (39%), Gaps = 19/125 (15%)
Query: 87 PWGRWDWSPSPRFAAR--LSTSSPFPQGRAQRPQRGGVDLPATPGGPRGQCAGRSGDVLR 144
PW R + P AA LS+ + G A R P P G G G R
Sbjct: 15 PWPRQQPALWPTLAALALLSSVAEASLGSAPRSPAPREGPPPVLASPAGHLPG--GRTAR 72
Query: 145 RAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQLRA 204
R RPPP P PAP P P+PP+ P G GRAA PG A RA
Sbjct: 73 WCSGRARRPPPQPSRPAP-----------PPPAPPSALPRG--GRAARAGGPGSRA--RA 117
Query: 205 PGRRG 209
G RG
Sbjct: 118 AGARG 122
>gi|50511941 EMI domain containing 1 [Homo sapiens]
Length = 443
Score = 48.1 bits (113), Expect = 1e-05
Identities = 43/139 (30%), Positives = 50/139 (35%), Gaps = 29/139 (20%)
Query: 110 PQGRAQRPQRGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAP---- 165
P+G A G+ P P GP G GR+G V R PP P P P AP
Sbjct: 209 PKGDAGSRGPMGMRGPPGPQGPPGS-PGRAGAVGTPGERGPPGPPGPPGPPGPPAPVGPP 267
Query: 166 ---------------------RRPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQLRA 204
P+GP P P PP P GP G P PG +
Sbjct: 268 HARISQHGDPLLSNTFTETNNHWPQGPTGP-PGPPG--PMGPPGPPGPTGVPGSPGHIGP 324
Query: 205 PGRRGRQRLLVHPGGGGRR 223
PG G + + HPG G R
Sbjct: 325 PGPTGPKGISGHPGEKGER 343
Score = 31.6 bits (70), Expect = 1.3
Identities = 33/126 (26%), Positives = 39/126 (30%), Gaps = 12/126 (9%)
Query: 104 STSSPFPQGRAQRPQRGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRAR------PPPVP 157
+ +P +G P G P P GP + GD L P P
Sbjct: 239 AVGTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPP 298
Query: 158 RLPAPRAPRRPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQLRAPGRRGRQRLLVHP 217
P P P P GP SP P GP G PG + G G Q
Sbjct: 299 GPPGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQ------ 352
Query: 218 GGGGRR 223
G G+R
Sbjct: 353 GSAGQR 358
>gi|27735129 hypothetical protein LOC148345 [Homo sapiens]
Length = 656
Score = 47.0 bits (110), Expect = 3e-05
Identities = 92/355 (25%), Positives = 121/355 (34%), Gaps = 56/355 (15%)
Query: 80 AQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGR--AQRPQRGGVDLPAT------PGGP 131
A GP A W D P A PF Q A+R Q LP P P
Sbjct: 240 AAGPAAQEWLSRDLLHRPSDALAKKGLGPFLQTAKPARRGQTSASILPRVVQAQRGPQPP 299
Query: 132 RGQCAGRSGDVLRRA--------GRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGRP 183
G+ AG G A G + + P P LP A P PSPPA RP
Sbjct: 300 PGE-AGIPGHPTPPATLPSEPVEGVQASPWRPRPVLPTHPALTLPVSSDASSPSPPAPRP 358
Query: 184 HGPAG-------------------RAAPGRRPGCTAQLR--APGRRGRQRLLVHPGGGGR 222
P P + PG LR + G ++ G
Sbjct: 359 ERPESLLVSGPSVTLTEGLGTVRPEQDPAKSPGSPLLLRGLSSGDVAAPEPIMGEPGQAS 418
Query: 223 RQWQRLARARRAALLALGALAHLRRCP----DTGGGQHLH--QLLAPGLCGDGAAVWPAA 276
++Q LAR RA L A ++H R P +T G + + PGL +GA
Sbjct: 419 EEFQPLARPWRATLAAEELVSH--RSPGEPQETCSGTEVERPRQTGPGLPREGARGHMDL 476
Query: 277 HAGRPRQLRLVHGPGLGLLCLGGIQRNPPALSCLDPQPEPPNLWSSESPAGGRERGRLRP 336
+ P Q + GPGL +L + P++ QP+P SS G R RL
Sbjct: 477 SSSEPSQ--DIEGPGLSILPARDATFSTPSVR----QPDPSAWLSSGPELTGMPRVRLAA 530
Query: 337 RAAEGPTQIAWRQRDAVSGQGLPGLCSVHSPRRAGLVEKRLMRGPESPSDLQGWG 391
A P + + + P SV P +A +E P P + WG
Sbjct: 531 PLAVLPMEPLPPEPVRPAALLTPEASSVGGPDQARYLES----APGWPVGQEEWG 581
Score = 32.0 bits (71), Expect = 1.00
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 15/103 (14%)
Query: 296 CLGGIQRNPPALSCLDPQPEPPNLWSSESPAGGRERGRLRPRAAEGPTQIAW-------R 348
C+G P + + L P PP+ PAG + AA GP W R
Sbjct: 198 CVGSGTEPPASTAALRTTPSPPSPGPETPPAGVPPAASSQVWAA-GPAAQEWLSRDLLHR 256
Query: 349 QRDAVSGQGLPGLCSVHSPRRAGLVEKRLM-------RGPESP 384
DA++ +GL P R G ++ RGP+ P
Sbjct: 257 PSDALAKKGLGPFLQTAKPARRGQTSASILPRVVQAQRGPQPP 299
>gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo
sapiens]
Length = 271
Score = 46.6 bits (109), Expect = 4e-05
Identities = 58/190 (30%), Positives = 72/190 (37%), Gaps = 41/190 (21%)
Query: 83 PGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRGG-----VDLPATPGG------- 130
P +P+G + R +R + P+GRA+ + G V A PGG
Sbjct: 2 PATAPFGGAQEAGGRRLTSRRENARAQPRGRAEEDKLGSAAAWKVAELALPGGSGSRGEG 61
Query: 131 ------PRGQCAGRSGDVLRRAGRRRARPPP-------VPRLPAPRAPR-----RPRGPA 172
P QC RS V R G P P VP PA R P+ RPR
Sbjct: 62 PTPSLKPSAQCV-RSPGVPRSLGGLCRAPDPALPVSVAVPPCPACRGPQSISRSRPRRAV 120
Query: 173 TPDPSP-PAGRPHGPAGRAAPGRRPGCTAQLRAPGRRGRQRLLVHPGGGGRRQWQRLARA 231
P P P PA GP R+ G RPG RA G L++ G G Q L
Sbjct: 121 RPRPGPWPAAPSRGPV-RSCRGPRPG-----RA---LGSLPLVLPAGSCGSCQEDSLGNQ 171
Query: 232 RRAALLALGA 241
R + L +GA
Sbjct: 172 ARPSALEIGA 181
>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 46.6 bits (109), Expect = 4e-05
Identities = 74/242 (30%), Positives = 94/242 (38%), Gaps = 48/242 (19%)
Query: 27 EHGWVVLLPGRPSSWGRSLADPPSSSQALHSPARQVHLVWLLR----SRGFREIKERA-Q 81
E G + GRP++ R P ++AL P + H LR SRG +++K R +
Sbjct: 5 ESGEIRSEEGRPTTESRIR---PRLAEALSQPTLR-HSASALRPPRLSRG-KDLKPRCGR 59
Query: 82 GPGASP--------WGRWD---W----SPSPRFA-ARLSTSSPFPQGRAQRPQ------- 118
GP SP W R W S SPR A A P P +AQ P+
Sbjct: 60 GPAHSPDPGEGCEAWRRLSADRWPRPASLSPRAALASAPGQKPQPARQAQLPRPVSGVRP 119
Query: 119 --RGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRARPP-PVPRLPAPRAPRRPRGPAT-P 174
RG V L PG P G CA G +R RPP P+P A + RGP T
Sbjct: 120 PPRGRVGLSQAPGRPLGACARAKG--IRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSA 177
Query: 175 DPSPPAGRPHGPAGRAAPGRR-----PGCTAQLRAPGRRGRQRLLV----HPGGGGRRQW 225
P P GR P + P + R P RG L V GG R+++
Sbjct: 178 TPGPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKF 237
Query: 226 QR 227
R
Sbjct: 238 TR 239
Score = 28.9 bits (63), Expect = 8.4
Identities = 37/137 (27%), Positives = 48/137 (35%), Gaps = 20/137 (14%)
Query: 94 SPSPRFAARLSTSSPFPQGRAQRPQRGGVDLPA--TPGGPRGQCAGRSGDVLRRAGRRRA 151
+P P F + L SP P + G + P T G G C+G + R
Sbjct: 268 APLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDS-------KHRT 320
Query: 152 RPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPA-GRAAPGRRPGCTAQLRAPGRRGR 210
LPAP AP P PA GP + P RR + A GR
Sbjct: 321 -------LPAPPAPTAWPAAGAPGAPNPAESRRGPGPAQGPPSRRDEPRRVVIAARECGR 373
Query: 211 QRLLVHPGG---GGRRQ 224
+ + P G GRR+
Sbjct: 374 EGSELPPSGEETPGRRK 390
>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 46.6 bits (109), Expect = 4e-05
Identities = 74/242 (30%), Positives = 94/242 (38%), Gaps = 48/242 (19%)
Query: 27 EHGWVVLLPGRPSSWGRSLADPPSSSQALHSPARQVHLVWLLR----SRGFREIKERA-Q 81
E G + GRP++ R P ++AL P + H LR SRG +++K R +
Sbjct: 5 ESGEIRSEEGRPTTESRIR---PRLAEALSQPTLR-HSASALRPPRLSRG-KDLKPRCGR 59
Query: 82 GPGASP--------WGRWD---W----SPSPRFA-ARLSTSSPFPQGRAQRPQ------- 118
GP SP W R W S SPR A A P P +AQ P+
Sbjct: 60 GPAHSPDPGEGCEAWRRLSADRWPRPASLSPRAALASAPGQKPQPARQAQLPRPVSGVRP 119
Query: 119 --RGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRARPP-PVPRLPAPRAPRRPRGPAT-P 174
RG V L PG P G CA G +R RPP P+P A + RGP T
Sbjct: 120 PPRGRVGLSQAPGRPLGACARAKG--IRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSA 177
Query: 175 DPSPPAGRPHGPAGRAAPGRR-----PGCTAQLRAPGRRGRQRLLV----HPGGGGRRQW 225
P P GR P + P + R P RG L V GG R+++
Sbjct: 178 TPGPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKF 237
Query: 226 QR 227
R
Sbjct: 238 TR 239
Score = 28.9 bits (63), Expect = 8.4
Identities = 37/137 (27%), Positives = 48/137 (35%), Gaps = 20/137 (14%)
Query: 94 SPSPRFAARLSTSSPFPQGRAQRPQRGGVDLPA--TPGGPRGQCAGRSGDVLRRAGRRRA 151
+P P F + L SP P + G + P T G G C+G + R
Sbjct: 268 APLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDS-------KHRT 320
Query: 152 RPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPA-GRAAPGRRPGCTAQLRAPGRRGR 210
LPAP AP P PA GP + P RR + A GR
Sbjct: 321 -------LPAPPAPTAWPAAGAPGAPNPAESRRGPGPAQGPPSRRDEPRRVVIAARECGR 373
Query: 211 QRLLVHPGG---GGRRQ 224
+ + P G GRR+
Sbjct: 374 EGSELPPSGEETPGRRK 390
>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 46.6 bits (109), Expect = 4e-05
Identities = 74/242 (30%), Positives = 94/242 (38%), Gaps = 48/242 (19%)
Query: 27 EHGWVVLLPGRPSSWGRSLADPPSSSQALHSPARQVHLVWLLR----SRGFREIKERA-Q 81
E G + GRP++ R P ++AL P + H LR SRG +++K R +
Sbjct: 5 ESGEIRSEEGRPTTESRIR---PRLAEALSQPTLR-HSASALRPPRLSRG-KDLKPRCGR 59
Query: 82 GPGASP--------WGRWD---W----SPSPRFA-ARLSTSSPFPQGRAQRPQ------- 118
GP SP W R W S SPR A A P P +AQ P+
Sbjct: 60 GPAHSPDPGEGCEAWRRLSADRWPRPASLSPRAALASAPGQKPQPARQAQLPRPVSGVRP 119
Query: 119 --RGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRARPP-PVPRLPAPRAPRRPRGPAT-P 174
RG V L PG P G CA G +R RPP P+P A + RGP T
Sbjct: 120 PPRGRVGLSQAPGRPLGACARAKG--IRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSA 177
Query: 175 DPSPPAGRPHGPAGRAAPGRR-----PGCTAQLRAPGRRGRQRLLV----HPGGGGRRQW 225
P P GR P + P + R P RG L V GG R+++
Sbjct: 178 TPGPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKF 237
Query: 226 QR 227
R
Sbjct: 238 TR 239
Score = 28.9 bits (63), Expect = 8.4
Identities = 37/137 (27%), Positives = 48/137 (35%), Gaps = 20/137 (14%)
Query: 94 SPSPRFAARLSTSSPFPQGRAQRPQRGGVDLPA--TPGGPRGQCAGRSGDVLRRAGRRRA 151
+P P F + L SP P + G + P T G G C+G + R
Sbjct: 268 APLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDS-------KHRT 320
Query: 152 RPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPA-GRAAPGRRPGCTAQLRAPGRRGR 210
LPAP AP P PA GP + P RR + A GR
Sbjct: 321 -------LPAPPAPTAWPAAGAPGAPNPAESRRGPGPAQGPPSRRDEPRRVVIAARECGR 373
Query: 211 QRLLVHPGG---GGRRQ 224
+ + P G GRR+
Sbjct: 374 EGSELPPSGEETPGRRK 390
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 46.6 bits (109), Expect = 4e-05
Identities = 48/162 (29%), Positives = 66/162 (40%), Gaps = 20/162 (12%)
Query: 49 PSSSQALHSPARQVHLVWLLRSRGFREIKERAQGPGASPWGRWDWSPSPRFAA------- 101
PS + A PA Q + R R + A GPGA P R SPSP+ A
Sbjct: 509 PSPTSAPQQPASQAAPPTQGQGRQSRPV---AGGPGAPPAARPPASPSPQRQAGPPQATR 565
Query: 102 RLSTSSPFPQGRAQRP-----QRGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRARPPPV 156
+ S S P P + P ++G P P GP Q A ++G V R +P P
Sbjct: 566 QTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQ-ASQAGPVPRTGPPTTQQPRPS 624
Query: 157 PRLPA----PRAPRRPRGPATPDPSPPAGRPHGPAGRAAPGR 194
PA P+ ++P P + AG P P +A+P +
Sbjct: 625 GPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLKASPAQ 666
Score = 38.1 bits (87), Expect = 0.014
Identities = 46/144 (31%), Positives = 53/144 (36%), Gaps = 45/144 (31%)
Query: 95 PSPRFAARLSTSSPFP----QGRAQRPQRGGVDLPATPGGPRGQCAGRSGDVLRRAGRRR 150
PSP A + S P QGR RP GG PG P A R
Sbjct: 509 PSPTSAPQQPASQAAPPTQGQGRQSRPVAGG------PGAPP-------------AARPP 549
Query: 151 ARPPPVPRLPAPRAPRRP--RGPATPDPS--PPAGR-----PHGPAGRAAPGRR------ 195
A P P + P+A R+ GPA P S PP G+ P P G A P R+
Sbjct: 550 ASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGP 609
Query: 196 -----PGCTAQLR--APGRRGRQR 212
P T Q R PG GR +
Sbjct: 610 VPRTGPPTTQQPRPSGPGPAGRPK 633
Score = 37.0 bits (84), Expect = 0.031
Identities = 45/149 (30%), Positives = 53/149 (35%), Gaps = 38/149 (25%)
Query: 83 PGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRP----QRGGVDLPATPGGPRGQ--CA 136
PGA P GR S + A + P PQG +P QR G L P P+GQ +
Sbjct: 439 PGALPLGR---QTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPP-PQGQQHLS 494
Query: 137 GRSGDVLRRAGRRRARPPPVPRLPA--------------------PRAPRRPRGPATPDP 176
G +R P P+ PA P AP R PA+P P
Sbjct: 495 GLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSP 554
Query: 177 SPPAGRPH--------GPAGRAAPGRRPG 197
AG P GPA A G PG
Sbjct: 555 QRQAGPPQATRQTSVSGPAPPKASGAPPG 583
Score = 34.3 bits (77), Expect = 0.20
Identities = 58/232 (25%), Positives = 79/232 (34%), Gaps = 28/232 (12%)
Query: 126 ATPG-GPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPR-APRRP------RGPATPDPS 177
A+PG G GQ L R ++ PP + P P+ P +P +GP
Sbjct: 426 ASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRP 485
Query: 178 PPAGRPH-----GPAGRAAPGRRPGCTAQLRAPGRRGRQRLLVHPGGGGRRQWQRLARAR 232
PP G+ H PAG P R P T+ + P + P G+ + R
Sbjct: 486 PPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAA------PPTQGQGRQSRPVAGG 539
Query: 233 RAALLALGALAHLRRCPDTGGGQHLHQLLAPGLCGDGAAVWPAAHAGRPRQLRLVHGPGL 292
A A A G Q Q G A+ P G+ RQ PG
Sbjct: 540 PGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPP--GGQQRQGPPQKPPGP 597
Query: 293 GLLCLGGIQRNPPALSCLDPQPEPPNLWSSESPAGGRERGRLRPRAAEGPTQ 344
Q P P+ PP P+G GR +P+ A+ P+Q
Sbjct: 598 AGPTRQASQAGPV------PRTGPPTT-QQPRPSGPGPAGRPKPQLAQKPSQ 642
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 46.6 bits (109), Expect = 4e-05
Identities = 85/318 (26%), Positives = 114/318 (35%), Gaps = 47/318 (14%)
Query: 74 REIKERAQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRG-GVDLPATPGGPR 132
R + G SP +S S R +RLS +GR QR G P+ GG
Sbjct: 250 RRSHRHSSGSSHSPSLSSHYSDS-RSPSRLSPKHR-DEGRKTGSQRSSGSRSPSPSGGSG 307
Query: 133 GQCAGRSGDVLRRAGRRRARP------PPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGP 186
R+G +R+G RP P P P+PR + A P+PPA P
Sbjct: 308 WGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAA---PTPPARGKESP 364
Query: 187 AGRAAPGRRPGCTAQLRAPGRRGRQRLLVHPGGGGRRQWQRLARARRAALLALGALAHLR 246
+ R+AP + GR GR GG GRR+ +R R R + + R
Sbjct: 365 SPRSAPS----------SQGRGGRA-----AGGAGRRRRRRRRRRRSRSSASAPRRRGRR 409
Query: 247 R---CPDTGGGQHLHQLLAPGLCGDG-AAVWPAAHAGRPRQLRLVHGPGLGLLCLGGIQR 302
R P G + L + + G G A P G R HG G G +
Sbjct: 410 RPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERG----HG-GHGKRA----KE 460
Query: 303 NPPALSCLDPQPEPPNLWSSESPAGGRERGRLRPRAAEGPTQIAW-RQRDAVSGQGLPGL 361
PP P P + GG E G+ R + GP +W R +
Sbjct: 461 RPPRARPASTSPSP----GAHGRRGGPE-GKSSSR-SPGPHPRSWSSSRSPSKSRSRSAE 514
Query: 362 CSVHSPRRAGLVEKRLMR 379
HSP R+ +K L R
Sbjct: 515 KRPHSPSRSPSPKKPLSR 532
Score = 29.6 bits (65), Expect = 4.9
Identities = 50/204 (24%), Positives = 66/204 (32%), Gaps = 35/204 (17%)
Query: 43 RSLADPPSSSQALHSPARQVHLVWLLRSRGFREIKERAQGPGASPWGRWDWSPSPRFAAR 102
R+ PP + A SP+ H RG E K ++ PG P W S SP +
Sbjct: 457 RAKERPPRARPASTSPSPGAH-----GRRGGPEGKSSSRSPGPHPRS-WSSSRSPSKSRS 510
Query: 103 LSTS--------SPFPQGRAQRPQRG-GVDLPATPGGPRGQCAGRSGDVLRRAGRRRARP 153
S SP P+ R + G G + R + RS +R+ RRR P
Sbjct: 511 RSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPIRK--RRRDSP 568
Query: 154 PPVPRLPAPRAPRRPRGPATPDPS------------------PPAGRPHGPAGRAAPGRR 195
+ A +RP P PS P G HG + G R
Sbjct: 569 SFMEPRRITSARKRPIPYYRPSPSSSSSCLSSDYSTRSHSRSPSPGHSHGSYSSRSHGTR 628
Query: 196 PGCTAQLRAPGRRGRQRLLVHPGG 219
+ R P R GG
Sbjct: 629 SRTRSPSRTPSPSYHSRSSSESGG 652
>gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 46.2 bits (108), Expect = 5e-05
Identities = 48/138 (34%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query: 81 QGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRA---------QRPQRGGVDLPATPGGP 131
Q G GR S + F+ R S + P+P GR+ +R +RG A G
Sbjct: 179 QERGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGL 238
Query: 132 RGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPAGRAA 191
G+ V + A + RARP + R APRA RPR PA +PP RPH PA A
Sbjct: 239 GGRTC-----VWQGAAQHRARPAGLAR--APRA--RPRDPAGVSRAPPRPRPH-PAS-PA 287
Query: 192 PGRRPGCTAQLRAPGRRG 209
PG A+ AP G
Sbjct: 288 PGDGALRGAEATAPAALG 305
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 46.2 bits (108), Expect = 5e-05
Identities = 53/177 (29%), Positives = 69/177 (38%), Gaps = 49/177 (27%)
Query: 74 REIKERAQGPGASPWGR--------WDWSPSPRFAARLSTSSPFPQ----GRAQRPQRG- 120
R +E A G G+ W R SP R +A P P R++RP+ G
Sbjct: 31 RADEEGAAGAGSKLWRRPRGAVSAGAPGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGL 90
Query: 121 --GVDLPATPGGPRGQCAGRSGDVLR------------RAGRRRARPPPVPRLPAPRAPR 166
G + P G R C+GR+G R R G RA+ PP R +P
Sbjct: 91 RPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSP---- 146
Query: 167 RPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQLRAPGRRGRQRLLVH--PGGGG 221
GPA+P RA+PG RPG A+ R+ R+ L H PG G
Sbjct: 147 ---GPASPP-------------RASPGGRPGSEARGRSGAECARRVPLHHGPPGASG 187
Score = 33.5 bits (75), Expect = 0.34
Identities = 36/130 (27%), Positives = 44/130 (33%), Gaps = 5/130 (3%)
Query: 93 WSPSPRFAARLSTSS-PFPQGRAQRPQRGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRA 151
+SP P R S P + R + +P G P G D + + A
Sbjct: 144 FSPGPASPPRASPGGRPGSEARGRSGAECARRVPLHHGPPGASGVGSERDRKFQLHQTPA 203
Query: 152 RPPPVPRLPA-PRAPRRPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQLRAPGRRGR 210
R PP P + R P G PP P G A R + RAPGR G
Sbjct: 204 RGPPFPGISGMTRGPVVLSGVNRQHRWPPGASPSRSLGEAGGERPARALRRPRAPGRAGG 263
Query: 211 QRLLVHPGGG 220
PGGG
Sbjct: 264 GG---PPGGG 270
Score = 32.7 bits (73), Expect = 0.58
Identities = 71/235 (30%), Positives = 84/235 (35%), Gaps = 52/235 (22%)
Query: 131 PRGQC-AGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPD-----------PSP 178
PRG AG G L R + PPP AP P P GP+ + SP
Sbjct: 48 PRGAVSAGAPGSPLYRV----SAPPP-----APPPPPPPGGPSRSERPRAGLRPGAFVSP 98
Query: 179 -PAGRPHGPAGRAAPGRRPGCT-AQLRAPGRRGRQRLLVHPG----GGGRRQWQRLARAR 232
P GR +GRA R C+ A L A R G R V P G R +
Sbjct: 99 GPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPPRASPGG 158
Query: 233 RAALLALG--ALAHLRRCPDTGGGQHLHQLLAPGLCGDGAAVWPAAHAGRPRQLRLVHGP 290
R A G RR P G PG G G+ R R+ +L P
Sbjct: 159 RPGSEARGRSGAECARRVPLHHG--------PPGASGVGSE--------RDRKFQLHQTP 202
Query: 291 GLG--LLCLGGIQRNPPALSCLDPQPE-PPNLWSSES--PAGGRERGRL--RPRA 338
G + G+ R P LS ++ Q PP S S AGG R RPRA
Sbjct: 203 ARGPPFPGISGMTRGPVVLSGVNRQHRWPPGASPSRSLGEAGGERPARALRRPRA 257
>gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 46.2 bits (108), Expect = 5e-05
Identities = 48/138 (34%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query: 81 QGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRA---------QRPQRGGVDLPATPGGP 131
Q G GR S + F+ R S + P+P GR+ +R +RG A G
Sbjct: 179 QERGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGL 238
Query: 132 RGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPAGRAA 191
G+ V + A + RARP + R APRA RPR PA +PP RPH PA A
Sbjct: 239 GGRTC-----VWQGAAQHRARPAGLAR--APRA--RPRDPAGVSRAPPRPRPH-PAS-PA 287
Query: 192 PGRRPGCTAQLRAPGRRG 209
PG A+ AP G
Sbjct: 288 PGDGALRGAEATAPAALG 305
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 46.2 bits (108), Expect = 5e-05
Identities = 53/177 (29%), Positives = 69/177 (38%), Gaps = 49/177 (27%)
Query: 74 REIKERAQGPGASPWGR--------WDWSPSPRFAARLSTSSPFPQ----GRAQRPQRG- 120
R +E A G G+ W R SP R +A P P R++RP+ G
Sbjct: 31 RADEEGAAGAGSKLWRRPRGAVSAGAPGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGL 90
Query: 121 --GVDLPATPGGPRGQCAGRSGDVLR------------RAGRRRARPPPVPRLPAPRAPR 166
G + P G R C+GR+G R R G RA+ PP R +P
Sbjct: 91 RPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSP---- 146
Query: 167 RPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQLRAPGRRGRQRLLVH--PGGGG 221
GPA+P RA+PG RPG A+ R+ R+ L H PG G
Sbjct: 147 ---GPASPP-------------RASPGGRPGSEARGRSGAECARRVPLHHGPPGASG 187
Score = 33.5 bits (75), Expect = 0.34
Identities = 36/130 (27%), Positives = 44/130 (33%), Gaps = 5/130 (3%)
Query: 93 WSPSPRFAARLSTSS-PFPQGRAQRPQRGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRA 151
+SP P R S P + R + +P G P G D + + A
Sbjct: 144 FSPGPASPPRASPGGRPGSEARGRSGAECARRVPLHHGPPGASGVGSERDRKFQLHQTPA 203
Query: 152 RPPPVPRLPA-PRAPRRPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQLRAPGRRGR 210
R PP P + R P G PP P G A R + RAPGR G
Sbjct: 204 RGPPFPGISGMTRGPVVLSGVNRQHRWPPGASPSRSLGEAGGERPARALRRPRAPGRAGG 263
Query: 211 QRLLVHPGGG 220
PGGG
Sbjct: 264 GG---PPGGG 270
Score = 32.7 bits (73), Expect = 0.58
Identities = 71/235 (30%), Positives = 84/235 (35%), Gaps = 52/235 (22%)
Query: 131 PRGQC-AGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPD-----------PSP 178
PRG AG G L R + PPP AP P P GP+ + SP
Sbjct: 48 PRGAVSAGAPGSPLYRV----SAPPP-----APPPPPPPGGPSRSERPRAGLRPGAFVSP 98
Query: 179 -PAGRPHGPAGRAAPGRRPGCT-AQLRAPGRRGRQRLLVHPG----GGGRRQWQRLARAR 232
P GR +GRA R C+ A L A R G R V P G R +
Sbjct: 99 GPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPPRASPGG 158
Query: 233 RAALLALG--ALAHLRRCPDTGGGQHLHQLLAPGLCGDGAAVWPAAHAGRPRQLRLVHGP 290
R A G RR P G PG G G+ R R+ +L P
Sbjct: 159 RPGSEARGRSGAECARRVPLHHG--------PPGASGVGSE--------RDRKFQLHQTP 202
Query: 291 GLG--LLCLGGIQRNPPALSCLDPQPE-PPNLWSSES--PAGGRERGRL--RPRA 338
G + G+ R P LS ++ Q PP S S AGG R RPRA
Sbjct: 203 ARGPPFPGISGMTRGPVVLSGVNRQHRWPPGASPSRSLGEAGGERPARALRRPRA 257
>gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo
sapiens]
Length = 344
Score = 46.2 bits (108), Expect = 5e-05
Identities = 48/138 (34%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query: 81 QGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRA---------QRPQRGGVDLPATPGGP 131
Q G GR S + F+ R S + P+P GR+ +R +RG A G
Sbjct: 179 QERGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGL 238
Query: 132 RGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPAGRAA 191
G+ V + A + RARP + R APRA RPR PA +PP RPH PA A
Sbjct: 239 GGRTC-----VWQGAAQHRARPAGLAR--APRA--RPRDPAGVSRAPPRPRPH-PAS-PA 287
Query: 192 PGRRPGCTAQLRAPGRRG 209
PG A+ AP G
Sbjct: 288 PGDGALRGAEATAPAALG 305
>gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo
sapiens]
Length = 800
Score = 45.8 bits (107), Expect = 7e-05
Identities = 84/269 (31%), Positives = 103/269 (38%), Gaps = 48/269 (17%)
Query: 82 GPGASPW-GRWDWSPSPRFAARLS--TSSPFPQGR---AQRPQR-GGVDLPATPGGP--- 131
GP A P GR SP P + L S P+GR A+ +R GG LP G P
Sbjct: 312 GPPAHPGPGRPSTSPCPLPPSLLCLWVESGTPRGRQSLAEGVKRDGGQGLPDVEGAPDMG 371
Query: 132 -RGQCAG-RSGDVLRRAGRRRARPPPVPRLPAP---------RAPRRPRGPATPDPSPPA 180
G+ AG G LR R RA PPP R P P ++ RGP+ P
Sbjct: 372 SSGEGAGLEEGSPLR---RERAWPPPSLRTPTPGLTEGGGTGLPSKQRRGPS---PKTEL 425
Query: 181 GRPHGPAGRAA------PGRRPGCTAQLRAPGRRGRQRLLVHPGGGGRRQWQRLARARRA 234
G P G GRA+ PG + G P R R+ L V G L R+
Sbjct: 426 GGPQGSLGRASLSGPFGPGPQGG-------PPSRDRRHLGVQIGRVRVPLGSALPYPARS 478
Query: 235 ALLALGALAHL-----RRCPDTGGGQHLHQ-LLAPGLCGDGAAVWPAAHAGRPRQLRLVH 288
L GA L R CP T G + + LL+P P A R++R
Sbjct: 479 ELAPPGARDALSPDPERPCPGTRGVRSGREGLLSPAPRSALGETAPTAQF-TFRKVRNPP 537
Query: 289 GPGLGLLCLGGIQRNP-PALSCLDPQPEP 316
GP G + G + P PA S P P
Sbjct: 538 GPRGGAMSAAGTRSPPGPAESARSRGPRP 566
Score = 29.6 bits (65), Expect = 4.9
Identities = 45/163 (27%), Positives = 51/163 (31%), Gaps = 26/163 (15%)
Query: 67 LLRSRGFREIKERAQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRGGVDLPA 126
L R R + R PG + G R T PQG R G P
Sbjct: 385 LRRERAWPPPSLRTPTPGLTEGGGTGLPSKQRRGPSPKTELGGPQGSLGRASLSGPFGPG 444
Query: 127 TPGGPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPR----APRRPRGPATPDPSPPAGR 182
GGP + G + R R P LP P AP R +PDP P
Sbjct: 445 PQGGPPSRDRRHLGVQI-----GRVRVPLGSALPYPARSELAPPGARDALSPDPERPCPG 499
Query: 183 PHG----------PAGRAAPGRRPGCTAQL------RAPGRRG 209
G PA R+A G TAQ PG RG
Sbjct: 500 TRGVRSGREGLLSPAPRSALG-ETAPTAQFTFRKVRNPPGPRG 541
>gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]
Length = 237
Score = 45.8 bits (107), Expect = 7e-05
Identities = 40/115 (34%), Positives = 45/115 (39%), Gaps = 17/115 (14%)
Query: 95 PSPRFAARLSTSSPFPQGRAQRPQRGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRARPP 154
P+ A LS+ + G A R P P G G G R R RPP
Sbjct: 42 PTLAALALLSSVAEASLGSAPRSPAPREGPPPVLASPAGHLPG--GRTARWCSGRARRPP 99
Query: 155 PVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQLRAPGRRG 209
P P PAP P P+PP+ P G GRAA PG A RA G RG
Sbjct: 100 PQPSRPAP-----------PPPAPPSALPRG--GRAARAGGPGSRA--RAAGARG 139
>gi|209954778 neurotrophic factor artemin isoform 3 precursor [Homo
sapiens]
Length = 228
Score = 45.8 bits (107), Expect = 7e-05
Identities = 40/115 (34%), Positives = 45/115 (39%), Gaps = 17/115 (14%)
Query: 95 PSPRFAARLSTSSPFPQGRAQRPQRGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRARPP 154
P+ A LS+ + G A R P P G G G R R RPP
Sbjct: 33 PTLAALALLSSVAEASLGSAPRSPAPREGPPPVLASPAGHLPG--GRTARWCSGRARRPP 90
Query: 155 PVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQLRAPGRRG 209
P P PAP P P+PP+ P G GRAA PG A RA G RG
Sbjct: 91 PQPSRPAP-----------PPPAPPSALPRG--GRAARAGGPGSRA--RAAGARG 130
>gi|209977029 neurotrophic factor artemin isoform 3 precursor [Homo
sapiens]
Length = 228
Score = 45.8 bits (107), Expect = 7e-05
Identities = 40/115 (34%), Positives = 45/115 (39%), Gaps = 17/115 (14%)
Query: 95 PSPRFAARLSTSSPFPQGRAQRPQRGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRARPP 154
P+ A LS+ + G A R P P G G G R R RPP
Sbjct: 33 PTLAALALLSSVAEASLGSAPRSPAPREGPPPVLASPAGHLPG--GRTARWCSGRARRPP 90
Query: 155 PVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQLRAPGRRG 209
P P PAP P P+PP+ P G GRAA PG A RA G RG
Sbjct: 91 PQPSRPAP-----------PPPAPPSALPRG--GRAARAGGPGSRA--RAAGARG 130
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.139 0.466
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,909,984
Number of Sequences: 37866
Number of extensions: 1734794
Number of successful extensions: 21837
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 1425
Number of HSP's that attempted gapping in prelim test: 11092
Number of HSP's gapped (non-prelim): 7322
length of query: 394
length of database: 18,247,518
effective HSP length: 104
effective length of query: 290
effective length of database: 14,309,454
effective search space: 4149741660
effective search space used: 4149741660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.