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Search of human proteins with 223942035
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223942035 NECAP endocytosis associated 2 isoform 3 [Homo
sapiens]
(237 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223942035 NECAP endocytosis associated 2 isoform 3 [Homo sapi... 490 e-139
gi|8922416 NECAP endocytosis associated 2 isoform 1 [Homo sapiens] 481 e-136
gi|223942032 NECAP endocytosis associated 2 isoform 2 [Homo sapi... 392 e-109
gi|31542528 NECAP endocytosis associated 1 [Homo sapiens] 291 4e-79
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 41 0.001
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 41 0.001
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 41 0.001
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 40 0.002
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 40 0.002
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 40 0.002
gi|91208420 bassoon protein [Homo sapiens] 38 0.007
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 38 0.007
gi|20143482 melanoma antigen family E, 1 [Homo sapiens] 37 0.015
gi|239755652 PREDICTED: hypothetical protein [Homo sapiens] 37 0.019
gi|239750190 PREDICTED: hypothetical protein [Homo sapiens] 37 0.019
gi|239744495 PREDICTED: hypothetical protein XP_002343166 [Homo ... 37 0.019
gi|171543825 gamma-glutamyltransferase 6 isoform a [Homo sapiens] 37 0.019
gi|163965366 nascent polypeptide-associated complex alpha subuni... 37 0.019
gi|157168329 formin 1 [Homo sapiens] 36 0.025
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 36 0.033
gi|27262663 colony stimulating factor 1 isoform b precursor [Hom... 35 0.043
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] 35 0.043
gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens] 35 0.057
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 35 0.074
gi|4505959 POU domain, class 2, transcription factor 2 [Homo sap... 35 0.074
gi|118582284 msh homeobox 1 [Homo sapiens] 34 0.097
gi|239757467 PREDICTED: hypothetical protein [Homo sapiens] 34 0.097
gi|239751993 PREDICTED: hypothetical protein [Homo sapiens] 34 0.097
gi|239746476 PREDICTED: hypothetical protein [Homo sapiens] 34 0.097
gi|116292174 fidgetin-like 2 [Homo sapiens] 34 0.097
>gi|223942035 NECAP endocytosis associated 2 isoform 3 [Homo
sapiens]
Length = 237
Score = 490 bits (1262), Expect = e-139
Identities = 237/237 (100%), Positives = 237/237 (100%)
Query: 1 MEESGAAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTD 60
MEESGAAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTD
Sbjct: 1 MEESGAAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTD 60
Query: 61 SSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGP 120
SSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGP
Sbjct: 61 SSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGP 120
Query: 121 KLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQ 180
KLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQ
Sbjct: 121 KLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQ 180
Query: 181 LAVGGSLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWVQF 237
LAVGGSLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWVQF
Sbjct: 181 LAVGGSLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWVQF 237
>gi|8922416 NECAP endocytosis associated 2 isoform 1 [Homo sapiens]
Length = 263
Score = 481 bits (1237), Expect = e-136
Identities = 232/232 (100%), Positives = 232/232 (100%)
Query: 6 AAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYF 65
AAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYF
Sbjct: 32 AAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYF 91
Query: 66 VIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLG 125
VIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLG
Sbjct: 92 VIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLG 151
Query: 126 FKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGG 185
FKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGG
Sbjct: 152 FKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGG 211
Query: 186 SLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWVQF 237
SLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWVQF
Sbjct: 212 SLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWVQF 263
>gi|223942032 NECAP endocytosis associated 2 isoform 2 [Homo
sapiens]
Length = 273
Score = 392 bits (1007), Expect = e-109
Identities = 201/229 (87%), Positives = 204/229 (89%), Gaps = 4/229 (1%)
Query: 6 AAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYF 65
AAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYF
Sbjct: 32 AAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYF 91
Query: 66 VIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLG 125
VIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLG
Sbjct: 92 VIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLG 151
Query: 126 FKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGG 185
FKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGG
Sbjct: 152 FKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGG 211
Query: 186 SLVQPAVAPSSGGAPVPWPQPNPATADIWGDF-TKSTGSTSSQTQPGTG 233
SLVQPAVAPSS P +P+ A A D T TS + P G
Sbjct: 212 SLVQPAVAPSSDQLPA---RPSQAQAGSSSDLSTVFPHVTSGKALPHLG 257
>gi|31542528 NECAP endocytosis associated 1 [Homo sapiens]
Length = 275
Score = 291 bits (744), Expect = 4e-79
Identities = 146/247 (59%), Positives = 177/247 (71%), Gaps = 19/247 (7%)
Query: 6 AAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYF 65
A++W+LDQP W+GRLRIT+KG+ AYIKLED+ SGELFAQAPV+Q+PG AVE+VTDSSRYF
Sbjct: 33 ASDWKLDQPDWTGRLRITSKGKTAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYF 92
Query: 66 VIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLG 125
VIRI+DG GR AFIGIGF DRGDAFDFNV+LQDHFKWVKQ+ E +K++Q D PKLDLG
Sbjct: 93 VIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDARPKLDLG 152
Query: 126 FKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGG 185
FKEGQTIKL I N+ K+G A PR A GGLSLLPPPPGGK + IPPP +A+
Sbjct: 153 FKEGQTIKLCIGNITNKKGGASKPRT--ARGGGLSLLPPPPGGKVT--IPPPSSSVAISN 208
Query: 186 SLVQPAVAPSSGG-------------APVPWPQPNPATA--DIWGDFTKSTGSTSSQTQP 230
+ P + S+ G APV P P P + D+WGDF+ ++ S +Q
Sbjct: 209 HVTPPPIPKSNHGGSDADILLDLDSPAPVTTPAPTPVSVSNDLWGDFSTASSSVPNQAPQ 268
Query: 231 GTGWVQF 237
+ WVQF
Sbjct: 269 PSNWVQF 275
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 40.8 bits (94), Expect = 0.001
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 153 PASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATAD 212
P+ GG ++ PPPP +T+ PPP L G + P+ P GG +P P P P +A
Sbjct: 622 PSLPGGTAISPPPPLSGDATIPPPP--PLPEGVGIPSPSSLP--GGTAIPPPPPLPGSAR 677
Query: 213 I 213
I
Sbjct: 678 I 678
Score = 35.8 bits (81), Expect = 0.033
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 153 PASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQP 206
P+S G + +PPPP S IPPP L G + + P P G A +P P P
Sbjct: 657 PSSLPGGTAIPPPPPLPGSARIPPPPPPLP-GSAGIPPPPPPLPGEAGMPPPPP 709
Score = 34.3 bits (77), Expect = 0.097
Identities = 20/61 (32%), Positives = 24/61 (39%)
Query: 144 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPW 203
G+A P P G + PPPP +PPP L G + P P G P P
Sbjct: 674 GSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPP 733
Query: 204 P 204
P
Sbjct: 734 P 734
Score = 32.3 bits (72), Expect = 0.37
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 157 GGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNP 208
GG ++ PPPP ++ + PPP G P P G P P P P P
Sbjct: 662 GGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPP-PPPLP 712
Score = 30.8 bits (68), Expect = 1.1
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 20/73 (27%)
Query: 153 PASTGGLSLLPPPPGGKTSTLIPPP-----------------GEQLAVGGSLVQPAVAPS 195
P +G +++PPPP ST PPP GG+ + P P
Sbjct: 580 PGDSG--TIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPP-PPL 636
Query: 196 SGGAPVPWPQPNP 208
SG A +P P P P
Sbjct: 637 SGDATIPPPPPLP 649
Score = 30.8 bits (68), Expect = 1.1
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 153 PASTGGLSLLPPPPGG-KTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNP 208
P G + +PPPP S IPPP L G + + P P GG +P P P P
Sbjct: 669 PPPLPGSARIPPPPPPLPGSAGIPPPPPPLP-GEAGMPPPPPPLPGGPGIPPPPPFP 724
Score = 28.9 bits (63), Expect = 4.1
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 153 PASTGGLSLLPPPPG--GKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPAT 210
P S + +PP P G + T+IPPP A G S P P P P P P P
Sbjct: 564 PPSVPSRAPVPPAPPLPGDSGTIIPPPP---APGDSTTPPPPPP-----PPPPPPPLPGG 615
Query: 211 ADIWGDFTKSTGSTSSQTQPGTG 233
I + G+ S P +G
Sbjct: 616 VCISSPPSLPGGTAISPPPPLSG 638
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 40.8 bits (94), Expect = 0.001
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 153 PASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATAD 212
P+ GG ++ PPPP +T+ PPP L G + P+ P GG +P P P P +A
Sbjct: 631 PSLPGGTAISPPPPLSGDATIPPPP--PLPEGVGIPSPSSLP--GGTAIPPPPPLPGSAR 686
Query: 213 I 213
I
Sbjct: 687 I 687
Score = 35.8 bits (81), Expect = 0.033
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 153 PASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQP 206
P+S G + +PPPP S IPPP L G + + P P G A +P P P
Sbjct: 666 PSSLPGGTAIPPPPPLPGSARIPPPPPPLP-GSAGIPPPPPPLPGEAGMPPPPP 718
Score = 34.3 bits (77), Expect = 0.097
Identities = 20/61 (32%), Positives = 24/61 (39%)
Query: 144 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPW 203
G+A P P G + PPPP +PPP L G + P P G P P
Sbjct: 683 GSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPP 742
Query: 204 P 204
P
Sbjct: 743 P 743
Score = 32.3 bits (72), Expect = 0.37
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 157 GGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNP 208
GG ++ PPPP ++ + PPP G P P G P P P P P
Sbjct: 671 GGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPP-PPPLP 721
Score = 30.8 bits (68), Expect = 1.1
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 20/73 (27%)
Query: 153 PASTGGLSLLPPPPGGKTSTLIPPP-----------------GEQLAVGGSLVQPAVAPS 195
P +G +++PPPP ST PPP GG+ + P P
Sbjct: 589 PGDSG--TIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPP-PPL 645
Query: 196 SGGAPVPWPQPNP 208
SG A +P P P P
Sbjct: 646 SGDATIPPPPPLP 658
Score = 30.8 bits (68), Expect = 1.1
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 153 PASTGGLSLLPPPPGG-KTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNP 208
P G + +PPPP S IPPP L G + + P P GG +P P P P
Sbjct: 678 PPPLPGSARIPPPPPPLPGSAGIPPPPPPLP-GEAGMPPPPPPLPGGPGIPPPPPFP 733
Score = 28.9 bits (63), Expect = 4.1
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 153 PASTGGLSLLPPPPG--GKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPAT 210
P S + +PP P G + T+IPPP A G S P P P P P P P
Sbjct: 573 PPSVPSRAPVPPAPPLPGDSGTIIPPPP---APGDSTTPPPPPP-----PPPPPPPLPGG 624
Query: 211 ADIWGDFTKSTGSTSSQTQPGTG 233
I + G+ S P +G
Sbjct: 625 VCISSPPSLPGGTAISPPPPLSG 647
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 40.8 bits (94), Expect = 0.001
Identities = 24/63 (38%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 144 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPW 203
G G P P +TG LPPPP G +PPP P PSSG P P
Sbjct: 363 GRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPP---------PPPPPPSSGNGPAPP 413
Query: 204 PQP 206
P P
Sbjct: 414 PLP 416
Score = 36.2 bits (82), Expect = 0.025
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 163 PPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNP 208
PPPPG PPP A G S P P +GG P+P P P P
Sbjct: 359 PPPPGRGG----PPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 400
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 39.7 bits (91), Expect = 0.002
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 144 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLV-----QPAVAPSSGG 198
GAAG P V + S++P P G P EQ+ GS QPA AP G
Sbjct: 1007 GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGA 1066
Query: 199 APVPWPQPNP 208
P P P P
Sbjct: 1067 VPPGVPPPGP 1076
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 39.7 bits (91), Expect = 0.002
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 144 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLV-----QPAVAPSSGG 198
GAAG P V + S++P P G P EQ+ GS QPA AP G
Sbjct: 976 GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGA 1035
Query: 199 APVPWPQPNP 208
P P P P
Sbjct: 1036 VPPGVPPPGP 1045
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 39.7 bits (91), Expect = 0.002
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 144 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLV-----QPAVAPSSGG 198
GAAG P V + S++P P G P EQ+ GS QPA AP G
Sbjct: 1007 GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGA 1066
Query: 199 APVPWPQPNP 208
P P P P
Sbjct: 1067 VPPGVPPPGP 1076
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 38.1 bits (87), Expect = 0.007
Identities = 24/75 (32%), Positives = 29/75 (38%)
Query: 136 IANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPS 195
+ N EG AG+ + P G P PG P G QL G+ AV P
Sbjct: 1 MGNEVSLEGGAGDGPLPPGGAGPGPGPGPGPGAGKPPSAPAGGGQLPAAGAARSTAVPPV 60
Query: 196 SGGAPVPWPQPNPAT 210
G P P P P P +
Sbjct: 61 PGPGPGPGPGPGPGS 75
Score = 28.9 bits (63), Expect = 4.1
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 14/68 (20%)
Query: 146 AGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQ 205
AG P+ P++ G P P G PP EQ GS A AP G AP P
Sbjct: 3818 AGKPQPGPSTATG-----PQPAG------PPRAEQ--TNGSK-GTAKAPQQGRAPQAQPA 3863
Query: 206 PNPATADI 213
P P A +
Sbjct: 3864 PGPGPAGV 3871
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 38.1 bits (87), Expect = 0.007
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 16/107 (14%)
Query: 117 DQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPP 176
D L L + + L A +EGAAG+ A+ GG GG +PP
Sbjct: 54 DAAAALRLALDQLSALGLGGAGDTDEEGAAGD---GAAAAGGAD------GGAAPEPVPP 104
Query: 177 PGEQLAVGGSLVQPAVAPSS------GGAPVPWPQPNPATADIWGDF 217
G + +L PAVAP S +P P P P P+ D++ F
Sbjct: 105 DGPEAGAPPTLA-PAVAPGSLPLLDPNASPPPPPPPRPSPPDVFAGF 150
>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
Length = 957
Score = 37.0 bits (84), Expect = 0.015
Identities = 37/134 (27%), Positives = 50/134 (37%), Gaps = 26/134 (19%)
Query: 116 PDQGPKLDL--GFKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSL------------ 161
P +GP + +GQ+I L G + V P +T GLS
Sbjct: 264 PGEGPSTSVLPAASDGQSISL-----VPTRGKGSSTSVPPTATEGLSTSVQPTAGEGSST 318
Query: 162 -LPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKS 220
+PP PGG ST +PP + P PS+ P+P + + T S
Sbjct: 319 SVPPTPGGGLSTSVPPTATEELSTSVPPTPGEGPSTSVLPIPGEGLSTSVPP-----TAS 373
Query: 221 TGS-TSSQTQPGTG 233
GS TS PG G
Sbjct: 374 DGSDTSVPPTPGEG 387
Score = 32.0 bits (71), Expect = 0.48
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 144 GAAGNPRVRPASTGGLSLLPPPPG--GKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPV 201
G + V P GLS PP G +++ P PGE + +LVQP G + +
Sbjct: 349 GEGPSTSVLPIPGEGLSTSVPPTASDGSDTSVPPTPGEGAS---TLVQPTAPDGPGSSVL 405
Query: 202 PWPQPNPAT 210
P P P+T
Sbjct: 406 PNPGEGPST 414
Score = 31.6 bits (70), Expect = 0.63
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 162 LPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKST 221
LPP PG TST +PP + + P PS+ P P P + +
Sbjct: 164 LPPTPGEGTSTSVPPTAYEGPSTSVVPTPDEGPSTSVLPTPGEGPGTSV-----PLAATE 218
Query: 222 G-STSSQTQPGTG 233
G STS Q P G
Sbjct: 219 GLSTSVQATPDEG 231
>gi|239755652 PREDICTED: hypothetical protein [Homo sapiens]
Length = 158
Score = 36.6 bits (83), Expect = 0.019
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 143 EGAAGNPRVRPASTGGL--SLLPPPPG--GKTSTLIPPPGEQLAVGGSLVQPAVAPSSGG 198
EG + R P GG S L PG ++ L PPPG +A G+L P P GG
Sbjct: 51 EGGSRRHRALPGRPGGPRGSRLSSRPGVPSRSRQLTPPPGSPMASFGALATP--DPPVGG 108
Query: 199 APVPWPQPNPA 209
AP P P A
Sbjct: 109 APAPALLPGQA 119
>gi|239750190 PREDICTED: hypothetical protein [Homo sapiens]
Length = 158
Score = 36.6 bits (83), Expect = 0.019
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 143 EGAAGNPRVRPASTGGL--SLLPPPPG--GKTSTLIPPPGEQLAVGGSLVQPAVAPSSGG 198
EG + R P GG S L PG ++ L PPPG +A G+L P P GG
Sbjct: 51 EGGSRRHRALPGRPGGPRGSRLSSRPGVPSRSRQLTPPPGSPMASFGALATP--DPPVGG 108
Query: 199 APVPWPQPNPA 209
AP P P A
Sbjct: 109 APAPALLPGQA 119
>gi|239744495 PREDICTED: hypothetical protein XP_002343166 [Homo
sapiens]
Length = 158
Score = 36.6 bits (83), Expect = 0.019
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 143 EGAAGNPRVRPASTGGL--SLLPPPPG--GKTSTLIPPPGEQLAVGGSLVQPAVAPSSGG 198
EG + R P GG S L PG ++ L PPPG +A G+L P P GG
Sbjct: 51 EGGSRRHRALPGRPGGPRGSRLSSRPGVPSRSRQLTPPPGSPMASFGALATP--DPPVGG 108
Query: 199 APVPWPQPNPA 209
AP P P A
Sbjct: 109 APAPALLPGQA 119
>gi|171543825 gamma-glutamyltransferase 6 isoform a [Homo sapiens]
Length = 493
Score = 36.6 bits (83), Expect = 0.019
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 155 STGGLSLLPPPPGGKT--------STLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQP 206
STG L + PPPGG + +I P G +L V G V A ++ V P
Sbjct: 84 STGSLGSVAPPPGGHSHGPGVYHHGAIISPAGRELLVAGGNVVDAGVGAALCLAVVHPHA 143
Query: 207 NPATADIWGDFTKSTGSTSSQTQPG 231
A WG F S+ S+ G
Sbjct: 144 TGLGAMFWGLFHDSSSGNSTALTSG 168
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 36.6 bits (83), Expect = 0.019
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 143 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAP 200
+GA P P S G PPP G T + PP + G+ PA PSS G P
Sbjct: 1307 KGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPK----GTPTLPATTPSSKGGP 1360
Score = 35.8 bits (81), Expect = 0.033
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Query: 143 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVG-----GSLVQPAVAPSS- 196
+GA P P S G PPP G T+ PP + + G+ PA P S
Sbjct: 1123 KGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSP 1182
Query: 197 -GGAPVPWPQPNPAT 210
GG P P+ P T
Sbjct: 1183 KGGLATPSPKGAPTT 1197
Score = 34.7 bits (78), Expect = 0.074
Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 143 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQP--AVAPSSGGAP 200
+GA P P S G PPP G T PP ++ G L P AP+
Sbjct: 1238 KGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPP----SLKGGLATPPHKGAPNPAVVT 1293
Query: 201 VPWPQPNPATADIWGDFTKSTGS-TSSQTQPGT 232
P P+ PAT+ G T + S + PGT
Sbjct: 1294 PPSPKGGPATSPPKGAPTPPAATPPSPKGSPGT 1326
Score = 32.7 bits (73), Expect = 0.28
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 143 EGAAGNPRVRPASTGGLSLLPP-PPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPV 201
+GA P V P S G P P G T PP + + + + P AP++ A +
Sbjct: 1006 KGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPL-PKGAPTTPAATL 1064
Query: 202 PWPQPNPATADIWG 215
P P+ PAT + G
Sbjct: 1065 PSPKGGPATPSLKG 1078
Score = 32.7 bits (73), Expect = 0.28
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Query: 143 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVG-----GSLVQPAVAPSS- 196
+GA P P S G P P G T+ PP + + G+ PA P S
Sbjct: 1169 KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSP 1228
Query: 197 -GGAPVPWPQPNPAT 210
GG P P+ P T
Sbjct: 1229 KGGLATPSPKGAPTT 1243
Score = 32.3 bits (72), Expect = 0.37
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Query: 143 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQ-------LAVGGSLVQPAVAPS 195
+GA P P S G P P G T + PP + G S A PS
Sbjct: 983 KGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPS 1042
Query: 196 SGGAPVPWPQPNPA 209
G+P P P A
Sbjct: 1043 PKGSPAATPLPKGA 1056
Score = 30.8 bits (68), Expect = 1.1
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Query: 143 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVG-----GSLVQPAVAPSS- 196
+GA P P S G PP G T+ PP + + G+ PA P S
Sbjct: 1100 KGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSP 1159
Query: 197 -GGAPVPWPQPNPAT 210
GG P P+ P T
Sbjct: 1160 KGGLATPPPKGAPTT 1174
Score = 29.6 bits (65), Expect = 2.4
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 143 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVP 202
+GA P P S G P P T PP + G + P AP+ A P
Sbjct: 937 KGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPK--GGPATPSPKGAPTPPAATPP 994
Query: 203 WPQPNPAT 210
P+ PAT
Sbjct: 995 SPKGGPAT 1002
Score = 28.9 bits (63), Expect = 4.1
Identities = 26/84 (30%), Positives = 31/84 (36%), Gaps = 10/84 (11%)
Query: 149 PRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVP--WPQP 206
P P S G P P G T PP + GG PA PS GAP P P
Sbjct: 966 PAATPPSPKGGPATPSPKGAPTPPAATPPSPK---GG----PA-TPSPKGAPTPPAVTPP 1017
Query: 207 NPATADIWGDFTKSTGSTSSQTQP 230
+P + F K + + T P
Sbjct: 1018 SPKGSPAATPFPKGASTPPAATPP 1041
Score = 28.9 bits (63), Expect = 4.1
Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 7/75 (9%)
Query: 143 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVG-----GSLVQPAVAPSS- 196
+GA P P S G P P G PP + + G+ PA P S
Sbjct: 1077 KGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSP 1136
Query: 197 -GGAPVPWPQPNPAT 210
GG P P+ P T
Sbjct: 1137 KGGLATPPPKGAPTT 1151
Score = 28.9 bits (63), Expect = 4.1
Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 143 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVG-----GSLVQPAVAPSS- 196
+GA P P S G P P G T+ PP + G+ PA P S
Sbjct: 1215 KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSL 1274
Query: 197 -GGAPVPWPQ--PNPA 209
GG P + PNPA
Sbjct: 1275 KGGLATPPHKGAPNPA 1290
Score = 28.1 bits (61), Expect = 6.9
Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 5/73 (6%)
Query: 143 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVG-----GSLVQPAVAPSSG 197
+GA V P S G PP G T PP + + G G+ PAV P S
Sbjct: 1284 KGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSP 1343
Query: 198 GAPVPWPQPNPAT 210
P P++
Sbjct: 1344 KGTPTLPATTPSS 1356
Score = 28.1 bits (61), Expect = 6.9
Identities = 27/99 (27%), Positives = 33/99 (33%), Gaps = 15/99 (15%)
Query: 147 GNPRVRPASTGGLSLLPPPPGGKTSTLIPP-------------PGEQLAVGGSLVQPAVA 193
G P + P S +P P G TS + P G G L PAV
Sbjct: 1380 GGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVT 1439
Query: 194 PSS--GGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQP 230
P S P+ PAT GD T + S +P
Sbjct: 1440 PVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEP 1478
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 36.2 bits (82), Expect = 0.025
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 13/72 (18%)
Query: 137 ANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSS 196
A ++ EG A N + LPPPP +++ PPP +G P + P S
Sbjct: 629 AALQPMEGMASNQQ---------KALPPPP----ASIPPPPPLPSGLGSLSPAPPMPPVS 675
Query: 197 GGAPVPWPQPNP 208
G P+P P P P
Sbjct: 676 AGPPLPPPPPPP 687
Score = 33.1 bits (74), Expect = 0.22
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 153 PASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQ----PAVAPSSGGAPVPW 203
P + GG PPPPG PPPG +G S Q PA+ PS P+ W
Sbjct: 713 PPNPGGPPPAPPPPGLAPP---PPPGLFFGLGSSSSQCPRKPAIEPSCPMKPLYW 764
Score = 31.2 bits (69), Expect = 0.82
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 8/60 (13%)
Query: 149 PRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNP 208
P P+ G LS PP P +PPP P + P S P P P P P
Sbjct: 655 PPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPP--------PPPLPPPSSAGPPPPPPPPP 706
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 35.8 bits (81), Expect = 0.033
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 144 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVP 202
GA G P P+S G L PPPP ++PPP L GG P P P P
Sbjct: 534 GAPGGPF--PSSVPGSLLPPPPPPPLPGGMLPPPPPPLPPGGPPPPPGPPPLGAIMPPP 590
>gi|27262663 colony stimulating factor 1 isoform b precursor [Homo
sapiens]
Length = 438
Score = 35.4 bits (80), Expect = 0.043
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 20/109 (18%)
Query: 141 KKEGAAGNPRVRPA-------------STGGLSLLPPPPGGKTSTLIPPPGEQLAV---- 183
K G+P+ RP+ S G + +P G+ S + P G +L+
Sbjct: 270 KDSTIGGSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIPVPQGTELSPSRPG 329
Query: 184 GGSLVQPAVAPS---SGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQ 229
GGS+ PS S +P+P AD+ G +S GS+S Q Q
Sbjct: 330 GGSMQTEPARPSNFLSASSPLPASAKGQQPADVTGHERQSEGSSSPQLQ 378
>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
Length = 778
Score = 35.4 bits (80), Expect = 0.043
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 157 GGLSLLPPPPGGKTSTLIPPPGEQLAVGGS-LVQPAVAP--SSGGAPVPWPQPNP 208
GG PPPP +++ L PPG + GG+ L P P S G P P P+P
Sbjct: 486 GGAGEQPPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPSP 540
>gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]
Length = 365
Score = 35.0 bits (79), Expect = 0.057
Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 10/87 (11%)
Query: 146 AGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQ 205
A PR P S LS PPG + L P P + G + P G PWP
Sbjct: 270 AAPPRRPPQSASSLSASLRPPGAPATFLRPSPIPCSSPGPWQSLCGLGPPCAGC--PWPT 327
Query: 206 PNPATADIWGDFTKSTGSTSSQTQPGT 232
P +S G TS + PGT
Sbjct: 328 AGPG--------RRSPGGTSPERSPGT 346
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 34.7 bits (78), Expect = 0.074
Identities = 32/116 (27%), Positives = 41/116 (35%), Gaps = 7/116 (6%)
Query: 116 PDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGL----SLLPPPPG---G 168
P + L LG E + A AA P+ P S + PP G G
Sbjct: 967 PIEPQGLGLGLGEARAAPRGAAGRPLSPPAAQPPQKPPPSYFAIVRDKEPAEPPAGAFPG 1026
Query: 169 KTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKSTGST 224
S PP AVG L + A S AP WP+ +P + + G G T
Sbjct: 1027 FPSPPAPPAAAATAVGPPLCRLAFEDESPPAPARWPRSDPESQPLLGPGAGGAGGT 1082
>gi|4505959 POU domain, class 2, transcription factor 2 [Homo
sapiens]
Length = 463
Score = 34.7 bits (78), Expect = 0.074
Identities = 19/60 (31%), Positives = 24/60 (40%)
Query: 144 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPW 203
G G P S+ PPPP ST P G A+G S + P+ P P P+
Sbjct: 402 GGGGGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPY 461
>gi|118582284 msh homeobox 1 [Homo sapiens]
Length = 303
Score = 34.3 bits (77), Expect = 0.097
Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 148 NPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPN 207
+P + P S L PG K S L P G Q A GGS V P S GAP P
Sbjct: 55 SPSLLPFSVEALMADHRKPGAKESALAPSEGVQ-AAGGSAQPLGVPPGSLGAPDAPSSPR 113
Query: 208 P 208
P
Sbjct: 114 P 114
>gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 34.3 bits (77), Expect = 0.097
Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 24/105 (22%)
Query: 150 RVRPASTGGLSLLPPP--------PGGKTSTLI-----------PPPGEQLAVGGSLVQP 190
RVR GG++ PP P G + P P L + P
Sbjct: 73 RVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSP 132
Query: 191 AVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWV 235
+ PS +P P P P+PA W +T ++SS PGT V
Sbjct: 133 GIRPSPSPSPSPSPSPSPARGGRW-----TTCASSSPALPGTDGV 172
>gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 34.3 bits (77), Expect = 0.097
Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 24/105 (22%)
Query: 150 RVRPASTGGLSLLPPP--------PGGKTSTLI-----------PPPGEQLAVGGSLVQP 190
RVR GG++ PP P G + P P L + P
Sbjct: 73 RVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSP 132
Query: 191 AVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWV 235
+ PS +P P P P+PA W +T ++SS PGT V
Sbjct: 133 GIRPSPSPSPSPSPSPSPARGGRW-----TTCASSSPALPGTDGV 172
>gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 34.3 bits (77), Expect = 0.097
Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 24/105 (22%)
Query: 150 RVRPASTGGLSLLPPP--------PGGKTSTLI-----------PPPGEQLAVGGSLVQP 190
RVR GG++ PP P G + P P L + P
Sbjct: 73 RVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSP 132
Query: 191 AVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWV 235
+ PS +P P P P+PA W +T ++SS PGT V
Sbjct: 133 GIRPSPSPSPSPSPSPSPARGGRW-----TTCASSSPALPGTDGV 172
>gi|116292174 fidgetin-like 2 [Homo sapiens]
Length = 653
Score = 34.3 bits (77), Expect = 0.097
Identities = 30/91 (32%), Positives = 35/91 (38%), Gaps = 21/91 (23%)
Query: 154 ASTGGLSLLPPPPGGKTSTLIPPPGE-------QLAVGGSLVQP---AVAPSSG------ 197
A TG + LPPPP PPPG GG QP A+ P G
Sbjct: 173 AQTG--AALPPPPPAALLQPPPPPGYGPSAPLYNYPAGGYAAQPGYGALPPPPGPPPAPY 230
Query: 198 ---GAPVPWPQPNPATADIWGDFTKSTGSTS 225
G P P P P PA +G T + G+ S
Sbjct: 231 LTPGLPAPTPLPAPAPPTAYGFPTAAPGAES 261
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,776,715
Number of Sequences: 37866
Number of extensions: 728354
Number of successful extensions: 4052
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 300
Number of HSP's that attempted gapping in prelim test: 3141
Number of HSP's gapped (non-prelim): 996
length of query: 237
length of database: 18,247,518
effective HSP length: 99
effective length of query: 138
effective length of database: 14,498,784
effective search space: 2000832192
effective search space used: 2000832192
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.