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Search of human proteins with 223555979
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223555979 probable ubiquitin-conjugating enzyme E2 FLJ25076
[Homo sapiens]
(161 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223555979 probable ubiquitin-conjugating enzyme E2 FLJ25076 [... 328 9e-91
gi|31543906 ubiquitin-conjugating enzyme E2Q [Homo sapiens] 178 2e-45
gi|223890185 ubiquitin-conjugating enzyme E2Q 2 isoform 2 [Homo ... 168 2e-42
gi|29789401 ubiquitin-conjugating enzyme E2Q 2 isoform 1 [Homo s... 168 2e-42
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa... 43 1e-04
gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo s... 43 1e-04
gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo s... 43 1e-04
gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 43 1e-04
gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 43 1e-04
gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 43 1e-04
gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 43 1e-04
gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 43 1e-04
gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 43 1e-04
gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sa... 43 1e-04
gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo sapi... 40 7e-04
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens] 40 7e-04
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s... 40 7e-04
gi|4507789 ubiquitin-conjugating enzyme E2L 3 isoform 1 [Homo sa... 38 0.003
gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 38 0.004
gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 38 0.004
gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo sa... 37 0.007
gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo sapi... 37 0.007
gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo s... 37 0.010
gi|4759282 ubiquitin-conjugating enzyme E2L 6 isoform 1 [Homo sa... 36 0.013
gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens] 36 0.016
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap... 35 0.028
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens] 35 0.028
gi|32967285 ubiquitin-conjugating enzyme E2C isoform 3 [Homo sap... 34 0.048
gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 34 0.048
gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 34 0.048
>gi|223555979 probable ubiquitin-conjugating enzyme E2 FLJ25076
[Homo sapiens]
Length = 161
Score = 328 bits (842), Expect = 9e-91
Identities = 161/161 (100%), Positives = 161/161 (100%)
Query: 1 MKELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPD 60
MKELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPD
Sbjct: 1 MKELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPD 60
Query: 61 NFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVKGQGR 120
NFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVKGQGR
Sbjct: 61 NFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVKGQGR 120
Query: 121 ICRKAGKSKKSFSRKEAEATFKSLVKTHEKYGWVTPPVSDG 161
ICRKAGKSKKSFSRKEAEATFKSLVKTHEKYGWVTPPVSDG
Sbjct: 121 ICRKAGKSKKSFSRKEAEATFKSLVKTHEKYGWVTPPVSDG 161
>gi|31543906 ubiquitin-conjugating enzyme E2Q [Homo sapiens]
Length = 422
Score = 178 bits (452), Expect = 2e-45
Identities = 93/169 (55%), Positives = 123/169 (72%), Gaps = 11/169 (6%)
Query: 1 MKELQDIARLSDRF----ISVELVDESLFDWNVKLHQVDKDSVLWQDMK----ETNTEFI 52
MKEL+DI R S F +VELV++SL+DWNVKL +VD+DS L D++ + +FI
Sbjct: 257 MKELRDIYR-SQSFKGGNYAVELVNDSLYDWNVKLLKVDQDSALHNDLQILKEKEGADFI 315
Query: 53 LLNLTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAA 112
LLN +F DNFPF PPF+RV+SP L GYVL GGAICMELLT +GWSSAY++E+V+ Q +A
Sbjct: 316 LLNFSFKDNFPFDPPFVRVVSPVLSGGYVLGGGAICMELLTKQGWSSAYSIESVIMQISA 375
Query: 113 SLVKGQGRICRKAGKSKKSFSRKEAEATFKSLVKTHEKYGWVTPPVSDG 161
+LVKG+ R+ + G +K +S A+ ++KSLV+ HEK GW TPP DG
Sbjct: 376 TLVKGKARV--QFGANKSQYSLTRAQQSYKSLVQIHEKNGWYTPPKEDG 422
>gi|223890185 ubiquitin-conjugating enzyme E2Q 2 isoform 2 [Homo
sapiens]
Length = 359
Score = 168 bits (426), Expect = 2e-42
Identities = 85/168 (50%), Positives = 117/168 (69%), Gaps = 9/168 (5%)
Query: 1 MKELQDIARLSDR---FISVELVDESLFDWNVKLHQVDKDSVLWQDMK----ETNTEFIL 53
MKEL+DI R SVEL+++SL+DW+VKL +VD DS L D++ + E+IL
Sbjct: 194 MKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYIL 253
Query: 54 LNLTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAAS 113
LN +F DNFPF PPF+RV+ P L GYVL GGA+CMELLT +GWSSAY++E+V+ Q A+
Sbjct: 254 LNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINAT 313
Query: 114 LVKGQGRICRKAGKSKKSFSRKEAEATFKSLVKTHEKYGWVTPPVSDG 161
LVKG+ R+ + G +K ++ A+ ++ S+V+ HEK GW TPP DG
Sbjct: 314 LVKGKARV--QFGANKNQYNLARAQQSYNSIVQIHEKNGWYTPPKEDG 359
>gi|29789401 ubiquitin-conjugating enzyme E2Q 2 isoform 1 [Homo
sapiens]
Length = 375
Score = 168 bits (426), Expect = 2e-42
Identities = 85/168 (50%), Positives = 117/168 (69%), Gaps = 9/168 (5%)
Query: 1 MKELQDIARLSDR---FISVELVDESLFDWNVKLHQVDKDSVLWQDMK----ETNTEFIL 53
MKEL+DI R SVEL+++SL+DW+VKL +VD DS L D++ + E+IL
Sbjct: 210 MKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYIL 269
Query: 54 LNLTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAAS 113
LN +F DNFPF PPF+RV+ P L GYVL GGA+CMELLT +GWSSAY++E+V+ Q A+
Sbjct: 270 LNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINAT 329
Query: 114 LVKGQGRICRKAGKSKKSFSRKEAEATFKSLVKTHEKYGWVTPPVSDG 161
LVKG+ R+ + G +K ++ A+ ++ S+V+ HEK GW TPP DG
Sbjct: 330 LVKGKARV--QFGANKNQYNLARAQQSYNSIVQIHEKNGWYTPPKEDG 375
>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
sapiens]
Length = 147
Score = 42.7 bits (99), Expect = 1e-04
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 2 KELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN 61
KEL D+AR S V + +F W +++ + L + FP +
Sbjct: 8 KELNDLARDPPAQCSAGPVGDDMFHWQA--------TIMGPNDSPYQGGVFFLTIHFPTD 59
Query: 62 FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASL 114
+PF PP + + R+ + + G+IC+++L + WS A T+ V+ + L
Sbjct: 60 YPFKPPKV-AFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLL 110
>gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo
sapiens]
Length = 149
Score = 42.7 bits (99), Expect = 1e-04
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 2 KELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN 61
KEL D+AR S V + +F W +++ + L + FP +
Sbjct: 10 KELSDLARDPPAQCSAGPVGDDMFHWQA--------TIMGPNDSPYQGGVFFLTIHFPTD 61
Query: 62 FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASL 114
+PF PP + + R+ + + G+IC+++L + WS A T+ V+ + L
Sbjct: 62 YPFKPPKV-AFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLL 112
>gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo
sapiens]
Length = 148
Score = 42.7 bits (99), Expect = 1e-04
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 2 KELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN 61
KEL D+AR S V + +F W +++ + L + FP +
Sbjct: 8 KELSDLARDPPAQCSAGPVGDDMFHWQA--------TIMGPNDSPYQGGVFFLTIHFPTD 59
Query: 62 FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASL 114
+PF PP + + R+ + + G+IC+++L + WS A T+ V+ + L
Sbjct: 60 YPFKPPKV-AFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLL 110
>gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 42.7 bits (99), Expect = 1e-04
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 2 KELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN 61
KEL D+AR S V + +F W +++ + L + FP +
Sbjct: 8 KELSDLARDPPAQCSAGPVGDDMFHWQA--------TIMGPNDSPYQGGVFFLTIHFPTD 59
Query: 62 FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASL 114
+PF PP + + R+ + + G+IC+++L + WS A T+ V+ + L
Sbjct: 60 YPFKPPKV-AFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLL 110
>gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 42.7 bits (99), Expect = 1e-04
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 2 KELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN 61
KEL D+AR S V + +F W +++ + L + FP +
Sbjct: 8 KELSDLARDPPAQCSAGPVGDDMFHWQA--------TIMGPNDSPYQGGVFFLTIHFPTD 59
Query: 62 FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASL 114
+PF PP + + R+ + + G+IC+++L + WS A T+ V+ + L
Sbjct: 60 YPFKPPKV-AFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLL 110
>gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 42.7 bits (99), Expect = 1e-04
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 2 KELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN 61
KEL D+AR S V + +F W +++ + L + FP +
Sbjct: 8 KELSDLARDPPAQCSAGPVGDDMFHWQA--------TIMGPNDSPYQGGVFFLTIHFPTD 59
Query: 62 FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASL 114
+PF PP + + R+ + + G+IC+++L + WS A T+ V+ + L
Sbjct: 60 YPFKPPKV-AFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLL 110
>gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 42.7 bits (99), Expect = 1e-04
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 2 KELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN 61
KEL D+AR S V + +F W +++ + L + FP +
Sbjct: 8 KELSDLARDPPAQCSAGPVGDDMFHWQA--------TIMGPNDSPYQGGVFFLTIHFPTD 59
Query: 62 FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASL 114
+PF PP + + R+ + + G+IC+++L + WS A T+ V+ + L
Sbjct: 60 YPFKPPKV-AFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLL 110
>gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 42.7 bits (99), Expect = 1e-04
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 2 KELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN 61
KEL D+AR S V + +F W +++ + L + FP +
Sbjct: 8 KELSDLARDPPAQCSAGPVGDDMFHWQA--------TIMGPNDSPYQGGVFFLTIHFPTD 59
Query: 62 FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASL 114
+PF PP + + R+ + + G+IC+++L + WS A T+ V+ + L
Sbjct: 60 YPFKPPKV-AFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLL 110
>gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 42.7 bits (99), Expect = 1e-04
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 2 KELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN 61
KEL D+AR S V + +F W +++ + L + FP +
Sbjct: 8 KELSDLARDPPAQCSAGPVGDDMFHWQA--------TIMGPNDSPYQGGVFFLTIHFPTD 59
Query: 62 FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASL 114
+PF PP + + R+ + + G+IC+++L + WS A T+ V+ + L
Sbjct: 60 YPFKPPKV-AFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLL 110
>gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 42.7 bits (99), Expect = 1e-04
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 2 KELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN 61
KEL D+AR S V + +F W +++ + L + FP +
Sbjct: 8 KELSDLARDPPAQCSAGPVGDDMFHWQA--------TIMGPNDSPYQGGVFFLTIHFPTD 59
Query: 62 FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASL 114
+PF PP + + R+ + + G+IC+++L + WS A T+ V+ + L
Sbjct: 60 YPFKPPKV-AFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLL 110
>gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo
sapiens]
Length = 179
Score = 40.4 bits (93), Expect = 7e-04
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 2 KELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN 61
+EL + D+ IS ++LF W +H +++D++ L+L FP
Sbjct: 37 QELMTLMMSGDKGISAFPESDNLFKWVGTIHGAA--GTVYEDLRYK------LSLEFPSG 88
Query: 62 FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVM 107
+P++ P ++ L+P + V G IC+++L + WS+ Y V ++
Sbjct: 89 YPYNAPTVKFLTP-CYHPNVDTQGNICLDILKEK-WSALYDVRTIL 132
>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
Length = 147
Score = 40.4 bits (93), Expect = 7e-04
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 2 KELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN 61
KEL D+ R S V + LF W +++ L + FP +
Sbjct: 8 KELSDLQRDPPAHCSAGPVGDDLFHWQA--------TIMGPPDSAYQGGVFFLTVHFPTD 59
Query: 62 FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASL 114
+PF PP + + ++ + + G+IC+++L + WS A TV V+ + L
Sbjct: 60 YPFKPPKI-AFTTKIYHPNINSNGSICLDILRSQ-WSPALTVSKVLLSICSLL 110
>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
sapiens]
Length = 147
Score = 40.4 bits (93), Expect = 7e-04
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 2 KELQDIARLSDRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN 61
KEL D+ R S V + LF W +++ + L + FP +
Sbjct: 8 KELTDLQRDPPAQCSAGPVGDDLFHWQA--------TIMGPNDSPYQGGVFFLTIHFPTD 59
Query: 62 FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASL 114
+PF PP + + ++ + + G+IC+++L + WS A TV V+ + L
Sbjct: 60 YPFKPPKV-AFTTKIYHPNINSNGSICLDILRSQ-WSPALTVSKVLLSICSLL 110
>gi|4507789 ubiquitin-conjugating enzyme E2L 3 isoform 1 [Homo
sapiens]
Length = 154
Score = 38.1 bits (87), Expect = 0.003
Identities = 28/149 (18%), Positives = 63/149 (42%), Gaps = 17/149 (11%)
Query: 1 MKELQDIARLSDR-FISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFP 59
MKEL++I + + F ++++ + +L W ++ D + + + FP
Sbjct: 8 MKELEEIRKCGMKNFRNIQVDEANLLTWQ---------GLIVPDNPPYDKGAFRIEINFP 58
Query: 60 DNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVKGQ- 118
+PF PP + ++ + + + G +C+ +++ W A + V++ A + Q
Sbjct: 59 AEYPFKPPKI-TFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQP 117
Query: 119 -----GRICRKAGKSKKSFSRKEAEATFK 142
+ + K +K F + E T K
Sbjct: 118 EHPLRADLAEEYSKDRKKFCKNAEEFTKK 146
>gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 37.7 bits (86), Expect = 0.004
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 12 DRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDNFPFSPPFMRV 71
D+ IS ++LF W +H +++D++ L+L FP +P++ P ++
Sbjct: 8 DKGISAFPESDNLFKWVGTIHGAA--GTVYEDLRYK------LSLEFPSGYPYNAPTVKF 59
Query: 72 LSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVM 107
L+P + V G IC+++L + WS+ Y V ++
Sbjct: 60 LTP-CYHPNVDTQGNICLDILKEK-WSALYDVRTIL 93
>gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 37.7 bits (86), Expect = 0.004
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 12 DRFISVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDNFPFSPPFMRV 71
D+ IS ++LF W +H +++D++ L+L FP +P++ P ++
Sbjct: 8 DKGISAFPESDNLFKWVGTIHGAA--GTVYEDLRYK------LSLEFPSGYPYNAPTVKF 59
Query: 72 LSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVM 107
L+P + V G IC+++L + WS+ Y V ++
Sbjct: 60 LTP-CYHPNVDTQGNICLDILKEK-WSALYDVRTIL 93
>gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo
sapiens]
Length = 157
Score = 37.0 bits (84), Expect = 0.007
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 54 LNLTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAAS 113
L + P+ +PF+PP +R ++ GAIC+++L + W++A T+ V+ A
Sbjct: 58 LEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQ-WAAAMTLRTVLLSLQAL 116
Query: 114 LVKGQ 118
L +
Sbjct: 117 LAAAE 121
>gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo
sapiens]
Length = 200
Score = 37.0 bits (84), Expect = 0.007
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 54 LNLTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAAS 113
L + P+ +PF+PP +R ++ GAIC+++L + W++A T+ V+ A
Sbjct: 58 LEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQ-WAAAMTLRTVLLSLQAL 116
Query: 114 LVKGQ 118
L +
Sbjct: 117 LAAAE 121
>gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo
sapiens]
Length = 118
Score = 36.6 bits (83), Expect = 0.010
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 54 LNLTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAAS 113
L + FP ++PF PP + + R+ + + G+IC+++L + WS A T+ V+ +
Sbjct: 23 LTIHFPTDYPFKPPKV-AFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSL 80
Query: 114 L 114
L
Sbjct: 81 L 81
>gi|4759282 ubiquitin-conjugating enzyme E2L 6 isoform 1 [Homo
sapiens]
Length = 153
Score = 36.2 bits (82), Expect = 0.013
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 1 MKELQDIARLSDRFI-SVELVDESLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFP 59
+KEL+D+ + ++ ++ D ++ W+ ++L D + + L ++FP
Sbjct: 8 VKELEDLQKKPPPYLRNLSSDDANVLVWH---------ALLLPDQPPYHLKAFNLRISFP 58
Query: 60 DNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGW 97
+PF PP ++ + ++ + V + G IC+ +++ W
Sbjct: 59 PEYPFKPPMIK-FTTKIYHPNVDENGQICLPIISSENW 95
>gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens]
Length = 238
Score = 35.8 bits (81), Expect = 0.016
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 1 MKELQDIARLSDRFISVELVDES-LFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFP 59
M EL+ + + LVDES L++W V + + L++ + ++ FP
Sbjct: 14 MLELKSLQEEPVEGFRITLVDESDLYNWEVAIF--GPPNTLYEG------GYFKAHIKFP 65
Query: 60 DNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTP 94
++P+SPP R L+ ++ + + + G +C+ +L P
Sbjct: 66 IDYPYSPPTFRFLT-KMWHPNIYENGDVCISILHP 99
>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
sapiens]
Length = 152
Score = 35.0 bits (79), Expect = 0.028
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 54 LNLTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAAS 113
L + F + +P PP +R +S D G+IC+++L R WS Y V +++ +
Sbjct: 55 LTIEFTEEYPNKPPTVRFVSKMFHPNVYAD-GSICLDILQNR-WSPTYDVSSILTSIQSL 112
Query: 114 L 114
L
Sbjct: 113 L 113
>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
Length = 152
Score = 35.0 bits (79), Expect = 0.028
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 54 LNLTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAAS 113
L + F + +P PP +R LS D G+IC+++L R WS Y V +++ +
Sbjct: 55 LVIEFSEEYPNKPPTVRFLSKMFHPNVYAD-GSICLDILQNR-WSPTYDVSSILTSIQSL 112
Query: 114 L 114
L
Sbjct: 113 L 113
>gi|32967285 ubiquitin-conjugating enzyme E2C isoform 3 [Homo
sapiens]
Length = 150
Score = 34.3 bits (77), Expect = 0.048
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 54 LNLTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVM 107
L+L FP +P++ P ++ L+P + V G IC+++L + WS+ Y V ++
Sbjct: 52 LSLEFPSGYPYNAPTVKFLTP-CYHPNVDTQGNICLDILKEK-WSALYDVRTIL 103
>gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 34.3 bits (77), Expect = 0.048
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 54 LNLTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAAS 113
L++TF ++PF PP + R+ + + G IC+++L WS A T+ V+ +
Sbjct: 112 LDITFSSDYPFKPPKV-TFRTRIYHCNINSQGVICLDILKD-NWSPALTISKVLLSICSL 169
Query: 114 L 114
L
Sbjct: 170 L 170
>gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 34.3 bits (77), Expect = 0.048
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 54 LNLTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAAS 113
L++TF ++PF PP + R+ + + G IC+++L WS A T+ V+ +
Sbjct: 112 LDITFSSDYPFKPPKV-TFRTRIYHCNINSQGVICLDILKD-NWSPALTISKVLLSICSL 169
Query: 114 L 114
L
Sbjct: 170 L 170
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,164,161
Number of Sequences: 37866
Number of extensions: 247602
Number of successful extensions: 611
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 579
Number of HSP's gapped (non-prelim): 55
length of query: 161
length of database: 18,247,518
effective HSP length: 94
effective length of query: 67
effective length of database: 14,688,114
effective search space: 984103638
effective search space used: 984103638
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.