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Name: UBE2C Sequence: fasta or formatted (140aa) NCBI GI: 32967287
Description:

ubiquitin-conjugating enzyme E2C isoform 4

Referenced in:

Cyclins and Related Functions
Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [161aa] ubiquitin-conjugating enzyme E2C isoform 2
alt prot [150aa] ubiquitin-conjugating enzyme E2C isoform 3
alt mRNA [140aa] ubiquitin-conjugating enzyme E2C isoform 4
alt prot [50aa] ubiquitin-conjugating enzyme E2C isoform 5
alt prot [179aa] ubiquitin-conjugating enzyme E2C isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7          8           2
 C cysteine            1.4          2           1
 D aspartate           5.0          7           1
 E glutamate           5.7          8           1
 F phenylalanine       3.6          5           1
 G glycine             5.7          8           1
 H histidine           2.1          3           1
 I isoleucine          5.0          7           1
 K lysine              7.1         10           2
 L leucine            11.4         16           2
 M methionine          2.1          3           2
 N asparagine          5.0          7           1
 P proline             7.1         10           1
 Q glutamine           3.6          5           1
 R arginine            1.4          2           1
 S serine              7.9         11           1
 T threonine           7.9         11           1
 V valine              4.3          6           1
 W tryptophan          2.1          3           1
 Y tyrosine            5.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 1.000   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2C                 1.000   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 0.750   ubiquitin-conjugating enzyme E2C isoform 3 
UBE2C                 0.448   ubiquitin-conjugating enzyme E2C isoform 2 
UBE2B                 0.347   ubiquitin-conjugating enzyme E2B 
UBE2A                 0.343   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2N                 0.306   ubiquitin-conjugating enzyme E2N 
UBE2D1                0.280   ubiquitin-conjugating enzyme E2D 1 
UBE2D4                0.272   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D2                0.272   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D3                0.272   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2D3                0.272   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D3                0.272   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.272   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.272   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.272   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.272   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.272   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.272   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2R2                0.261   ubiquitin-conjugating enzyme UBC3B 
UBE2T                 0.254   ubiquitin-conjugating enzyme E2T 
UBE2K                 0.250   ubiquitin-conjugating enzyme E2K isoform 1 
UBE2G1                0.250   ubiquitin-conjugating enzyme E2G 1 
UBE2E3                0.250   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.250   ubiquitin-conjugating enzyme E2E 3 
UBE2D2                0.246   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2E2                0.243   ubiquitin-conjugating enzyme E2E 2 
CDC34                 0.239   ubiquitin-conjugating enzyme Cdc34 
UBE2E1                0.239   ubiquitin-conjugating enzyme E2E 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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