Guide to the Human Genome
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Name: UBE2E3 Sequence: fasta or formatted (207aa) NCBI GI: 33359694
Description:

ubiquitin-conjugating enzyme E2E 3

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt mRNA [207aa] ubiquitin-conjugating enzyme E2E 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         14           2
 C cysteine            2.4          5           1
 D aspartate           7.2         15           2
 E glutamate           5.3         11           2
 F phenylalanine       2.4          5           2
 G glycine             4.3          9           2
 H histidine           1.0          2           1
 I isoleucine          6.3         13           1
 K lysine              6.8         14           2
 L leucine             7.2         15           2
 M methionine          0.5          1           1
 N asparagine          3.9          8           1
 P proline             8.2         17           3
 Q glutamine           4.3          9           2
 R arginine            5.8         12           1
 S serine             12.1         25           2
 T threonine           8.2         17           2
 V valine              2.9          6           1
 W tryptophan          1.4          3           1
 Y tyrosine            2.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                1.000   ubiquitin-conjugating enzyme E2E 3 
UBE2E2                0.830   ubiquitin-conjugating enzyme E2E 2 
UBE2E1                0.744   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2E1                0.632   ubiquitin-conjugating enzyme E2E 1 isoform 2 
UBE2D2                0.441   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D1                0.441   ubiquitin-conjugating enzyme E2D 1 
UBE2D3                0.441   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D3                0.441   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.441   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.441   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.441   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.441   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.441   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.441   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D4                0.439   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D3                0.431   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2D2                0.356   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2N                 0.263   ubiquitin-conjugating enzyme E2N 
UBE2T                 0.233   ubiquitin-conjugating enzyme E2T 
UBE2B                 0.231   ubiquitin-conjugating enzyme E2B 
UBE2A                 0.226   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2NL                0.218   ubiquitin-conjugating enzyme E2N-like 
UBE2K                 0.208   ubiquitin-conjugating enzyme E2K isoform 1 
UBE2L3                0.193   ubiquitin-conjugating enzyme E2L 3 isoform 1 
UBE2C                 0.190   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2G1                0.188   ubiquitin-conjugating enzyme E2G 1 
UBE2K                 0.183   ubiquitin-conjugating enzyme E2K isoform 2 
UBE2G2                0.180   ubiquitin-conjugating enzyme E2G 2 isoform 1 
UBE2I                 0.178   ubiquitin-conjugating enzyme E2I 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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