Guide to the Human Genome
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Name: UBE2R2 Sequence: fasta or formatted (238aa) NCBI GI: 22212943
Description:

ubiquitin-conjugating enzyme UBC3B

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         12           1
 C cysteine            1.3          3           1
 D aspartate          10.9         26           4
 E glutamate           9.7         23           4
 F phenylalanine       3.4          8           1
 G glycine             3.8          9           2
 H histidine           1.3          3           1
 I isoleucine          5.5         13           2
 K lysine              6.3         15           1
 L leucine             7.6         18           2
 M methionine          2.1          5           1
 N asparagine          5.0         12           1
 P proline             7.1         17           2
 Q glutamine           3.4          8           3
 R arginine            2.9          7           1
 S serine              8.0         19           2
 T threonine           5.0         12           2
 V valine              5.5         13           1
 W tryptophan          1.7          4           1
 Y tyrosine            4.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme UBC3B 
CDC34                 0.800   ubiquitin-conjugating enzyme Cdc34 
UBE2G1                0.337   ubiquitin-conjugating enzyme E2G 1 
UBE2G2                0.271   ubiquitin-conjugating enzyme E2G 2 isoform 1 
UBE2G2                0.249   ubiquitin-conjugating enzyme E2G 2 isoform 2 
UBE2B                 0.192   ubiquitin-conjugating enzyme E2B 
UBE2A                 0.192   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2D1                0.160   ubiquitin-conjugating enzyme E2D 1 
UBE2C                 0.154   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2D3                0.154   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2C                 0.149   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 0.149   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2D4                0.149   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2L3                0.145   ubiquitin-conjugating enzyme E2L 3 isoform 1 
UBE2D3                0.143   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D3                0.143   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.143   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.143   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.143   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.143   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.143   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.143   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2I                 0.141   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.141   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.141   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.141   ubiquitin-conjugating enzyme E2I 
UBE2N                 0.139   ubiquitin-conjugating enzyme E2N 
UBE2D2                0.139   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2T                 0.136   ubiquitin-conjugating enzyme E2T 
UBE2D2                0.132   ubiquitin-conjugating enzyme E2D 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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