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Name: UBE2D3 Sequence: fasta or formatted (147aa) NCBI GI: 33149314
Description:

ubiquitin-conjugating enzyme E2D 3 isoform 1

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt mRNA [147aa] ubiquitin-conjugating enzyme E2D 3 isoform 1
alt mRNA [147aa] ubiquitin-conjugating enzyme E2D 3 isoform 1
alt mRNA [147aa] ubiquitin-conjugating enzyme E2D 3 isoform 1
alt mRNA [147aa] ubiquitin-conjugating enzyme E2D 3 isoform 1
alt mRNA [147aa] ubiquitin-conjugating enzyme E2D 3 isoform 1
alt prot [148aa] ubiquitin-conjugating enzyme E2D 3 isoform 2
alt prot [149aa] ubiquitin-conjugating enzyme E2D 3 isoform 3
alt mRNA [147aa] ubiquitin-conjugating enzyme E2D 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1          9           1
 C cysteine            2.7          4           1
 D aspartate           8.2         12           2
 E glutamate           2.0          3           1
 F phenylalanine       4.1          6           2
 G glycine             4.1          6           2
 H histidine           2.0          3           1
 I isoleucine          8.2         12           1
 K lysine              5.4          8           1
 L leucine             8.2         12           2
 M methionine          2.7          4           1
 N asparagine          4.8          7           1
 P proline            10.2         15           2
 Q glutamine           3.4          5           1
 R arginine            5.4          8           1
 S serine              7.5         11           1
 T threonine           5.4          8           2
 V valine              3.4          5           1
 W tryptophan          2.0          3           1
 Y tyrosine            4.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                1.000   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                1.000   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                1.000   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                1.000   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                1.000   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                1.000   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.990   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D2                0.979   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D3                0.962   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2D4                0.941   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D1                0.906   ubiquitin-conjugating enzyme E2D 1 
UBE2D2                0.788   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2E3                0.611   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.611   ubiquitin-conjugating enzyme E2E 3 
UBE2E2                0.604   ubiquitin-conjugating enzyme E2E 2 
UBE2E1                0.604   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2E1                0.521   ubiquitin-conjugating enzyme E2E 1 isoform 2 
UBE2N                 0.385   ubiquitin-conjugating enzyme E2N 
UBE2A                 0.361   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2T                 0.351   ubiquitin-conjugating enzyme E2T 
UBE2B                 0.351   ubiquitin-conjugating enzyme E2B 
UBE2G2                0.330   ubiquitin-conjugating enzyme E2G 2 isoform 1 
UBE2K                 0.323   ubiquitin-conjugating enzyme E2K isoform 1 
UBE2L3                0.309   ubiquitin-conjugating enzyme E2L 3 isoform 1 
UBE2G1                0.306   ubiquitin-conjugating enzyme E2G 1 
UBE2NL                0.306   ubiquitin-conjugating enzyme E2N-like 
UBE2S                 0.285   ubiquitin-conjugating enzyme E2S 
UBE2K                 0.278   ubiquitin-conjugating enzyme E2K isoform 2 
UBE2G2                0.278   ubiquitin-conjugating enzyme E2G 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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