Guide to the Human Genome
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Name: UBE2L3 Sequence: fasta or formatted (154aa) NCBI GI: 4507789
Description:

ubiquitin-conjugating enzyme E2L 3 isoform 1

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [121aa] ubiquitin-conjugating enzyme E2L 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         11           2
 C cysteine            1.9          3           1
 D aspartate           5.8          9           1
 E glutamate           9.1         14           2
 F phenylalanine       4.5          7           1
 G glycine             3.2          5           1
 H histidine           1.3          2           1
 I isoleucine          7.1         11           1
 K lysine             11.7         18           2
 L leucine             6.5         10           2
 M methionine          1.9          3           1
 N asparagine          5.8          9           1
 P proline             9.1         14           2
 Q glutamine           3.9          6           1
 R arginine            5.2          8           2
 S serine              2.6          4           1
 T threonine           3.9          6           1
 V valine              4.5          7           1
 W tryptophan          1.3          2           1
 Y tyrosine            3.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2L 3 isoform 1 
UBE2L3                0.653   ubiquitin-conjugating enzyme E2L 3 isoform 2 
UBE2L6                0.529   ubiquitin-conjugating enzyme E2L 6 isoform 1 
UBE2D4                0.320   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D1                0.316   ubiquitin-conjugating enzyme E2D 1 
UBE2D2                0.303   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D3                0.303   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D2                0.300   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2D3                0.300   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.300   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.300   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.300   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.300   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.300   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.300   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.293   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2L6                0.279   ubiquitin-conjugating enzyme E2L 6 isoform 2 
UBE2T                 0.276   ubiquitin-conjugating enzyme E2T 
UBE2E2                0.259   ubiquitin-conjugating enzyme E2E 2 
UBE2E1                0.259   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2E3                0.259   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.259   ubiquitin-conjugating enzyme E2E 3 
UBE2E1                0.256   ubiquitin-conjugating enzyme E2E 1 isoform 2 
UBE2N                 0.249   ubiquitin-conjugating enzyme E2N 
UBE2G1                0.232   ubiquitin-conjugating enzyme E2G 1 
UBE2R2                0.229   ubiquitin-conjugating enzyme UBC3B 
CDC34                 0.222   ubiquitin-conjugating enzyme Cdc34 
UBE2A                 0.215   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2B                 0.212   ubiquitin-conjugating enzyme E2B 
UBE2G2                0.212   ubiquitin-conjugating enzyme E2G 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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