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Name: UBE2C Sequence: fasta or formatted (150aa) NCBI GI: 32967285
Description:

ubiquitin-conjugating enzyme E2C isoform 3

Referenced in:

Cyclins and Related Functions
Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [161aa] ubiquitin-conjugating enzyme E2C isoform 2
alt prot [140aa] ubiquitin-conjugating enzyme E2C isoform 4
alt prot [140aa] ubiquitin-conjugating enzyme E2C isoform 4
alt prot [50aa] ubiquitin-conjugating enzyme E2C isoform 5
alt prot [179aa] ubiquitin-conjugating enzyme E2C isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         14           3
 C cysteine            1.3          2           1
 D aspartate           4.0          6           1
 E glutamate           6.0          9           1
 F phenylalanine       2.0          3           1
 G glycine             5.3          8           2
 H histidine           1.3          2           1
 I isoleucine          3.3          5           1
 K lysine              6.7         10           2
 L leucine            11.3         17           2
 M methionine          2.0          3           1
 N asparagine          4.7          7           1
 P proline             8.0         12           1
 Q glutamine           5.3          8           2
 R arginine            4.0          6           1
 S serine              7.3         11           1
 T threonine           6.7         10           1
 V valine              4.7          7           1
 W tryptophan          1.3          2           1
 Y tyrosine            5.3          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2C isoform 3 
UBE2C                 0.943   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2C                 0.713   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 0.713   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 0.475   ubiquitin-conjugating enzyme E2C isoform 2 
UBE2N                 0.266   ubiquitin-conjugating enzyme E2N 
UBE2A                 0.262   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2B                 0.262   ubiquitin-conjugating enzyme E2B 
UBE2D1                0.234   ubiquitin-conjugating enzyme E2D 1 
UBE2D4                0.227   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D2                0.227   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D3                0.227   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2D3                0.227   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D3                0.227   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.227   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.227   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.227   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.227   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.227   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.227   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2K                 0.220   ubiquitin-conjugating enzyme E2K isoform 1 
UBE2C                 0.216   ubiquitin-conjugating enzyme E2C isoform 5 
UBE2NL                0.216   ubiquitin-conjugating enzyme E2N-like 
UBE2R2                0.209   ubiquitin-conjugating enzyme UBC3B 
UBE2T                 0.206   ubiquitin-conjugating enzyme E2T 
UBE2D2                0.202   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2M                 0.199   ubiquitin-conjugating enzyme E2M 
UBE2G1                0.199   ubiquitin-conjugating enzyme E2G 1 
UBE2K                 0.195   ubiquitin-conjugating enzyme E2K isoform 2 
CDC34                 0.191   ubiquitin-conjugating enzyme Cdc34 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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