Guide to the Human Genome
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Name: UBE2A Sequence: fasta or formatted (152aa) NCBI GI: 32967280
Description:

ubiquitin-conjugating enzyme E2A isoform 1

Referenced in:

DNases, Recombination, and DNA Repair
Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [122aa] ubiquitin-conjugating enzyme E2A isoform 2
alt prot [77aa] ubiquitin-conjugating enzyme E2A isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9          9           2
 C cysteine            1.3          2           1
 D aspartate           5.3          8           1
 E glutamate           7.9         12           2
 F phenylalanine       4.6          7           1
 G glycine             3.9          6           1
 H histidine           0.7          1           1
 I isoleucine          5.3          8           1
 K lysine              3.9          6           1
 L leucine             5.9          9           2
 M methionine          2.6          4           1
 N asparagine          6.6         10           2
 P proline             9.2         14           2
 Q glutamine           4.6          7           1
 R arginine            6.6         10           3
 S serine              9.2         14           2
 T threonine           5.3          8           1
 V valine              5.9          9           1
 W tryptophan          2.0          3           1
 Y tyrosine            3.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2B                 0.952   ubiquitin-conjugating enzyme E2B 
UBE2A                 0.725   ubiquitin-conjugating enzyme E2A isoform 2 
UBE2A                 0.471   ubiquitin-conjugating enzyme E2A isoform 3 
UBE2D1                0.371   ubiquitin-conjugating enzyme E2D 1 
UBE2D4                0.371   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D2                0.361   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D3                0.357   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D3                0.357   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.357   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.357   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.357   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.357   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.357   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.357   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.354   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2G2                0.347   ubiquitin-conjugating enzyme E2G 2 isoform 1 
UBE2N                 0.344   ubiquitin-conjugating enzyme E2N 
UBE2I                 0.340   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.340   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.340   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.340   ubiquitin-conjugating enzyme E2I 
UBE2C                 0.337   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2C                 0.316   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 0.316   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2E1                0.316   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2E2                0.309   ubiquitin-conjugating enzyme E2E 2 
UBE2E3                0.309   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.309   ubiquitin-conjugating enzyme E2E 3 
UBE2R2                0.309   ubiquitin-conjugating enzyme UBC3B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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