Guide to the Human Genome
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Name: UBE2D2 Sequence: fasta or formatted (118aa) NCBI GI: 33188456
Description:

ubiquitin-conjugating enzyme E2D 2 isoform 2

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [147aa] ubiquitin-conjugating enzyme E2D 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1          6           1
 C cysteine            2.5          3           1
 D aspartate           5.9          7           2
 E glutamate           2.5          3           1
 F phenylalanine       5.1          6           2
 G glycine             3.4          4           2
 H histidine           2.5          3           1
 I isoleucine          9.3         11           1
 K lysine              5.1          6           1
 L leucine             7.6          9           2
 M methionine          2.5          3           1
 N asparagine          5.1          6           1
 P proline            10.2         12           2
 Q glutamine           3.4          4           1
 R arginine            5.1          6           1
 S serine              6.8          8           1
 T threonine           6.8          8           2
 V valine              3.4          4           1
 W tryptophan          2.5          3           1
 Y tyrosine            5.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2D2                1.000   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D3                0.991   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2D3                0.991   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.991   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.991   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.991   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.991   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.991   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.991   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.987   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D4                0.961   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D1                0.926   ubiquitin-conjugating enzyme E2D 1 
UBE2E3                0.620   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.620   ubiquitin-conjugating enzyme E2E 3 
UBE2E2                0.616   ubiquitin-conjugating enzyme E2E 2 
UBE2E1                0.607   ubiquitin-conjugating enzyme E2E 1 isoform 2 
UBE2E1                0.607   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2N                 0.459   ubiquitin-conjugating enzyme E2N 
UBE2T                 0.393   ubiquitin-conjugating enzyme E2T 
UBE2K                 0.393   ubiquitin-conjugating enzyme E2K isoform 1 
UBE2L3                0.389   ubiquitin-conjugating enzyme E2L 3 isoform 1 
UBE2A                 0.389   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2B                 0.380   ubiquitin-conjugating enzyme E2B 
UBE2NL                0.358   ubiquitin-conjugating enzyme E2N-like 
UBE2G2                0.354   ubiquitin-conjugating enzyme E2G 2 isoform 2 
UBE2G2                0.354   ubiquitin-conjugating enzyme E2G 2 isoform 1 
UBE2G1                0.332   ubiquitin-conjugating enzyme E2G 1 
UBE2K                 0.328   ubiquitin-conjugating enzyme E2K isoform 2 
UBE2I                 0.319   ubiquitin-conjugating enzyme E2I 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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