Guide to the Human Genome
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Name: RECQL4 Sequence: fasta or formatted (1208aa) NCBI GI: 116812616
Description:

RecQ protein-like 4

Referenced in:

Replication Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7        117           3
 C cysteine            2.9         35           1
 D aspartate           3.7         45           2
 E glutamate           7.4         89           4
 F phenylalanine       2.7         33           1
 G glycine             8.0         97           4
 H histidine           3.1         37           2
 I isoleucine          1.5         18           3
 K lysine              2.6         32           2
 L leucine            10.8        130           2
 M methionine          1.3         16           1
 N asparagine          1.0         12           1
 P proline             9.3        112           2
 Q glutamine           7.0         84           2
 R arginine            9.3        112           3
 S serine              6.8         82           3
 T threonine           4.0         48           2
 V valine              6.0         72           3
 W tryptophan          1.3         16           1
 Y tyrosine            1.7         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RecQ protein-like 4 
RECQL5                0.064   RecQ protein-like 5 isoform 1 
RECQL5                0.064   RecQ protein-like 5 isoform 3 
RECQL5                0.064   RecQ protein-like 5 isoform 2 
BLM                   0.060   Bloom syndrome protein 
RECQL                 0.059   RecQ protein-like 
RECQL                 0.059   RecQ protein-like 
WRN                   0.058   Werner syndrome protein 
LOC652522             0.058   PREDICTED: similar to Werner syndrome ATP-dependent...
DDX43                 0.022   DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 
DDX46                 0.019   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
DDX17                 0.018   DEAD box polypeptide 17 isoform 3 
DDX17                 0.018   DEAD box polypeptide 17 isoform 1 
DDX5                  0.017   DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 
DDX41                 0.016   DEAD-box protein abstrakt 
DDX49                 0.014   DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 
EIF4A2                0.014   eukaryotic translation initiation factor 4A2 
DDX27                 0.013   DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 
DDX50                 0.013   nucleolar protein GU2 
EIF4A3                0.013   eukaryotic translation initiation factor 4A, isoform ...
DDX59                 0.013   DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 
EIF4A1                0.012   eukaryotic translation initiation factor 4A isoform 1...
DDX21                 0.012   DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 
SYN1                  0.012   synapsin I isoform Ia 
SYN1                  0.012   synapsin I isoform Ib 
DDX4                  0.011   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...
DDX4                  0.011   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [...
DDX4                  0.011   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ...
DDX6                  0.011   DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 
DDX47                 0.011   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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