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Search of human proteins with 222831607
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222831607 interleukin 18 binding protein isoform b precursor
[Homo sapiens]
(115 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222831607 interleukin 18 binding protein isoform b precursor ... 241 1e-64
gi|222831620 interleukin 18 binding protein isoform a precursor ... 166 3e-42
gi|89111129 interleukin 18 binding protein isoform a precursor [... 166 3e-42
gi|89111125 interleukin 18 binding protein isoform a precursor [... 166 3e-42
gi|89111127 interleukin 18 binding protein isoform a precursor [... 166 3e-42
gi|19913396 smoothelin isoform b [Homo sapiens] 40 5e-04
gi|19913394 smoothelin isoform c [Homo sapiens] 40 5e-04
gi|19913398 smoothelin isoform a [Homo sapiens] 40 5e-04
gi|126722969 centromere protein T [Homo sapiens] 37 0.004
gi|239757110 PREDICTED: hypothetical protein [Homo sapiens] 33 0.063
gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens] 32 0.083
gi|75709198 nephronectin [Homo sapiens] 32 0.083
gi|163965366 nascent polypeptide-associated complex alpha subuni... 32 0.083
gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo ... 32 0.11
gi|40353729 Ras and Rab interactor 3 [Homo sapiens] 32 0.14
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 31 0.18
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 31 0.18
gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo... 31 0.18
gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens] 31 0.24
gi|169209613 PREDICTED: hypothetical protein LOC100128785 [Homo ... 31 0.24
gi|169210642 PREDICTED: hypothetical protein LOC100128785 [Homo ... 31 0.24
gi|169210176 PREDICTED: hypothetical protein LOC100128785 [Homo ... 31 0.24
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens] 31 0.24
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 31 0.24
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 30 0.31
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 30 0.31
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 30 0.41
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 30 0.41
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 30 0.41
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 30 0.41
>gi|222831607 interleukin 18 binding protein isoform b precursor
[Homo sapiens]
Length = 115
Score = 241 bits (614), Expect = 1e-64
Identities = 115/115 (100%), Positives = 115/115 (100%)
Query: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
Sbjct: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
Query: 61 AKQCPALEVTWPEVEVPLSWAEGNLAPHPRSPALQPQQSTAAGLRLSTGPAAAQP 115
AKQCPALEVTWPEVEVPLSWAEGNLAPHPRSPALQPQQSTAAGLRLSTGPAAAQP
Sbjct: 61 AKQCPALEVTWPEVEVPLSWAEGNLAPHPRSPALQPQQSTAAGLRLSTGPAAAQP 115
>gi|222831620 interleukin 18 binding protein isoform a precursor
[Homo sapiens]
Length = 194
Score = 166 bits (421), Expect = 3e-42
Identities = 78/79 (98%), Positives = 79/79 (100%)
Query: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
Sbjct: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
Query: 61 AKQCPALEVTWPEVEVPLS 79
AKQCPALEVTWPEVEVPL+
Sbjct: 61 AKQCPALEVTWPEVEVPLN 79
>gi|89111129 interleukin 18 binding protein isoform a precursor
[Homo sapiens]
Length = 194
Score = 166 bits (421), Expect = 3e-42
Identities = 78/79 (98%), Positives = 79/79 (100%)
Query: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
Sbjct: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
Query: 61 AKQCPALEVTWPEVEVPLS 79
AKQCPALEVTWPEVEVPL+
Sbjct: 61 AKQCPALEVTWPEVEVPLN 79
>gi|89111125 interleukin 18 binding protein isoform a precursor
[Homo sapiens]
Length = 194
Score = 166 bits (421), Expect = 3e-42
Identities = 78/79 (98%), Positives = 79/79 (100%)
Query: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
Sbjct: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
Query: 61 AKQCPALEVTWPEVEVPLS 79
AKQCPALEVTWPEVEVPL+
Sbjct: 61 AKQCPALEVTWPEVEVPLN 79
>gi|89111127 interleukin 18 binding protein isoform a precursor
[Homo sapiens]
Length = 194
Score = 166 bits (421), Expect = 3e-42
Identities = 78/79 (98%), Positives = 79/79 (100%)
Query: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
Sbjct: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
Query: 61 AKQCPALEVTWPEVEVPLS 79
AKQCPALEVTWPEVEVPL+
Sbjct: 61 AKQCPALEVTWPEVEVPLN 79
>gi|19913396 smoothelin isoform b [Homo sapiens]
Length = 915
Score = 39.7 bits (91), Expect = 5e-04
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 24 VTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVPLSWAEG 83
VTLL+RA P S T+++ AS S+ P +PP+ PA QC EV P P
Sbjct: 187 VTLLLRAPPGS--TSSSPASPSSSPTPASPEPPLEPAEAQCLTAEV--PGSPEPPPSPPK 242
Query: 84 NLAPHPRSPALQPQQSTAAGLRLSTGP 110
+P P+ P +L +GP
Sbjct: 243 TTSPEPQESPTLPSTEGQVVNKLLSGP 269
>gi|19913394 smoothelin isoform c [Homo sapiens]
Length = 917
Score = 39.7 bits (91), Expect = 5e-04
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 24 VTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVPLSWAEG 83
VTLL+RA P S T+++ AS S+ P +PP+ PA QC EV P P
Sbjct: 187 VTLLLRAPPGS--TSSSPASPSSSPTPASPEPPLEPAEAQCLTAEV--PGSPEPPPSPPK 242
Query: 84 NLAPHPRSPALQPQQSTAAGLRLSTGP 110
+P P+ P +L +GP
Sbjct: 243 TTSPEPQESPTLPSTEGQVVNKLLSGP 269
>gi|19913398 smoothelin isoform a [Homo sapiens]
Length = 940
Score = 39.7 bits (91), Expect = 5e-04
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 24 VTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVPLSWAEG 83
VTLL+RA P S T+++ AS S+ P +PP+ PA QC EV P P
Sbjct: 187 VTLLLRAPPGS--TSSSPASPSSSPTPASPEPPLEPAEAQCLTAEV--PGSPEPPPSPPK 242
Query: 84 NLAPHPRSPALQPQQSTAAGLRLSTGP 110
+P P+ P +L +GP
Sbjct: 243 TTSPEPQESPTLPSTEGQVVNKLLSGP 269
>gi|126722969 centromere protein T [Homo sapiens]
Length = 561
Score = 36.6 bits (83), Expect = 0.004
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 38 TAATASV---RSTKDPCPSQPPVFPAAKQ--CPALEVTWPEVEVPLSWAEGNLAPHPRSP 92
TA +S+ S P P+ V P+ ++ C +LE+ PE+E P + A G LAP R
Sbjct: 96 TAPESSILMPESVVKPVPAPQAVQPSRQESSCGSLELQLPELEPPTTLAPGLLAPGRRKQ 155
Query: 93 ALQP---QQSTAAGLRLSTGP 110
L+ QQ GL LS P
Sbjct: 156 RLRLSVFQQGVDQGLSLSQEP 176
>gi|239757110 PREDICTED: hypothetical protein [Homo sapiens]
Length = 192
Score = 32.7 bits (73), Expect = 0.063
Identities = 24/89 (26%), Positives = 31/89 (34%)
Query: 27 LVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVPLSWAEGNLA 86
L + T AS R P Q PAA P + P SWA G+
Sbjct: 3 LAEESAAGHPTPGGPASARRAHSGRPHQARRHPAAWGLPVRRPSHPPRPTTSSWANGSNR 62
Query: 87 PHPRSPALQPQQSTAAGLRLSTGPAAAQP 115
HP ++Q + GL AA+ P
Sbjct: 63 QHPAELSVQLPANPPPGLNQGCIRAASAP 91
>gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens]
Length = 1597
Score = 32.3 bits (72), Expect = 0.083
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 34 SQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVT-W-PEVEVPLSWAEGNLAPHPRS 91
+++T + T++ RS + P CP+ T W PE++ P S E ++ HP +
Sbjct: 903 ARSTESFTSTSRSKSEVSPGMAFSNMTNFLCPSSPTTPWTPELQGPTSKDEAGVSEHPEA 962
Query: 92 PALQPQQST 100
PA +P + T
Sbjct: 963 PAREPLRRT 971
>gi|75709198 nephronectin [Homo sapiens]
Length = 565
Score = 32.3 bits (72), Expect = 0.083
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 2 TMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAA 61
T +NW PD+ W ++ ++ P S+ TT T + T P P PP P
Sbjct: 281 TGNNNWIPDVGSTWWPPKTPYIPPIITN-RPTSKPTTRPTP--KPTPIPTPPPPPPLPTE 337
Query: 62 KQCPALEVTWPE 73
+ P L T PE
Sbjct: 338 LRTP-LPPTTPE 348
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 32.3 bits (72), Expect = 0.083
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 8/99 (8%)
Query: 21 AHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPAL----EVTWPEVEV 76
A TLL + TP + A T P P + P P K+ PA E + P
Sbjct: 1528 APTATLLSKKTPATLAPKEALIPPAMTV-PSPKKTPAIPTPKEAPATPSSKEASSPPAVT 1586
Query: 77 PLSWAEGNLAPHPRSPALQPQQSTAAGLRLSTGPAAAQP 115
P ++ AP P+ + P ++ + T PA P
Sbjct: 1587 PSTYKG---APSPKELLIPPAVTSPSPKEAPTPPAVTPP 1622
Score = 30.4 bits (67), Expect = 0.31
Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 5/84 (5%)
Query: 32 PVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVPLSWAEGNLAPHPRS 91
P +T T + ++ P P + P PA KQ PAL +T + + P S
Sbjct: 881 PPKETPTPSVVNL-----PFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPS 935
Query: 92 PALQPQQSTAAGLRLSTGPAAAQP 115
P P A GPA P
Sbjct: 936 PKGAPTPPAATPPSPKGGPATPSP 959
Score = 26.9 bits (58), Expect = 3.5
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Query: 30 ATPVSQTTTAATASVRSTKD--PCPSQPPVFPAAKQCPALEVTWPEVEVPLSWAEGNLAP 87
ATP S+ ++ A ST P P + + PA E P P S +G P
Sbjct: 1572 ATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATP 1631
Query: 88 HPRSPALQPQQSTAAGLRLSTGPAA 112
P+ P + ++ T PA+
Sbjct: 1632 APKGTPTSPPVTPSSLKDSPTSPAS 1656
>gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo
sapiens]
Length = 907
Score = 32.0 bits (71), Expect = 0.11
Identities = 23/84 (27%), Positives = 31/84 (36%)
Query: 30 ATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVPLSWAEGNLAPHP 89
A P + T AA S DP AA + + PE VP+ + AP
Sbjct: 459 AAPATPTPVAAALDACSGNDPFAPSEGSAEAAPELDLFAMKPPETSVPVVTPTASTAPPV 518
Query: 90 RSPALQPQQSTAAGLRLSTGPAAA 113
+ A P + AA +T AA
Sbjct: 519 PATAPSPAPAVAAAAAATTAATAA 542
Score = 26.2 bits (56), Expect = 5.9
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 21 AHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVPLSW 80
A + T A+ + T TA TA V D + P PAA + A T V L
Sbjct: 415 AEIATASASASTTT-TVTAVTAEVDLFGDAFAASPGEAPAASEGAAAPATPTPVAAALDA 473
Query: 81 AEGN--LAPHPRSPALQPQ 97
GN AP S P+
Sbjct: 474 CSGNDPFAPSEGSAEAAPE 492
>gi|40353729 Ras and Rab interactor 3 [Homo sapiens]
Length = 985
Score = 31.6 bits (70), Expect = 0.14
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 50 PC-PSQPPVFPAAKQCPALEV-TWPEVEVPLSWAEGNLAPHPRSPALQPQQ 98
PC P+QPPV PA PA + T P V P ++ PH P P Q
Sbjct: 291 PCSPAQPPVLPALAPAPACPLPTSPPVPAP------HVTPHAPGPPDHPNQ 335
Score = 26.2 bits (56), Expect = 5.9
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 30 ATPVSQTTTAATASVRSTKDPCPSQPPVFP----AAKQCPALEVTWPEVEVPLSWAEGNL 85
A P+ T+ A + + R P PPV P + Q P L P PL +
Sbjct: 259 ARPLPPTSDATSPTSRWAPRRPPPPPPVLPLQPCSPAQPPVLPALAPAPACPLPTSPPVP 318
Query: 86 APH--PRSP 92
APH P +P
Sbjct: 319 APHVTPHAP 327
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 31.2 bits (69), Expect = 0.18
Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 15/101 (14%)
Query: 30 ATPVSQTTTAATASVRSTKDPCPSQPPVFPAAK---------QCPALEVTWPEVEVPLSW 80
ATP SQ + A P+ PP+ P+A P L++ P + P +
Sbjct: 464 ATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPAL 523
Query: 81 AEGNLAPHPRSPALQPQQ---STAAGLRLS---TGPAAAQP 115
A L P PA P Q S +A L +S T P A P
Sbjct: 524 ATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPP 564
Score = 27.3 bits (59), Expect = 2.7
Identities = 24/89 (26%), Positives = 28/89 (31%), Gaps = 3/89 (3%)
Query: 30 ATPVSQTTTAATASVRSTKDPCPSQPP---VFPAAKQCPALEVTWPEVEVPLSWAEGNLA 86
ATP S + T A+ P PS PP P+ P + T L L
Sbjct: 323 ATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLP 382
Query: 87 PHPRSPALQPQQSTAAGLRLSTGPAAAQP 115
P SP P L L A P
Sbjct: 383 SPPLSPLATPPPQAPPALALPPLQAPPSP 411
Score = 26.2 bits (56), Expect = 5.9
Identities = 25/101 (24%), Positives = 34/101 (33%), Gaps = 15/101 (14%)
Query: 30 ATPVSQTTTAATASVRSTKDPCPSQPPVFPAAK--------------QCPALEVTWPEVE 75
ATP Q A P+ PP+ P A Q P P V+
Sbjct: 390 ATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQ 449
Query: 76 VPLS-WAEGNLAPHPRSPALQPQQSTAAGLRLSTGPAAAQP 115
P S A ++P P+ P A L++ P A+ P
Sbjct: 450 APFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPP 490
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 31.2 bits (69), Expect = 0.18
Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 15/101 (14%)
Query: 30 ATPVSQTTTAATASVRSTKDPCPSQPPVFPAAK---------QCPALEVTWPEVEVPLSW 80
ATP SQ + A P+ PP+ P+A P L++ P + P +
Sbjct: 425 ATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPAL 484
Query: 81 AEGNLAPHPRSPALQPQQ---STAAGLRLS---TGPAAAQP 115
A L P PA P Q S +A L +S T P A P
Sbjct: 485 ATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPP 525
Score = 26.6 bits (57), Expect = 4.5
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 18/95 (18%)
Query: 30 ATPVSQTTTA-ATASVRSTKDPCPSQPPVFPAAKQCPAL--EVTWPEVEVPLSWAEGNLA 86
ATP SQ TT+ + ++++T PS PP+ P A P + P ++ P S
Sbjct: 320 ATPPSQATTSLGSPTLQATHSFLPS-PPLSPLATPPPQAPPALALPPLQAPPS------- 371
Query: 87 PHPRSPAL------QPQQSTAAGLRLSTGPAAAQP 115
P SP L PQ A + L P + P
Sbjct: 372 -PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP 405
>gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo
sapiens]
Length = 1905
Score = 31.2 bits (69), Expect = 0.18
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 12/75 (16%)
Query: 49 DPCPSQPPVFP---AAKQCPALEVTWPEVEVPLSWAEGNLAPHPRSPALQPQQSTAAGLR 105
DP PSQPP P A+ P + W + + N AP P PA+ Q T + +
Sbjct: 1298 DPAPSQPPEEPEPDEAESSPDPQALWFNISAQMPC---NAAPTP-PPAVSEDQPTPSPQQ 1353
Query: 106 LSTG-----PAAAQP 115
L++ P+AA P
Sbjct: 1354 LASSKPMNRPSAANP 1368
>gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens]
Length = 694
Score = 30.8 bits (68), Expect = 0.24
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 15/107 (14%)
Query: 23 VVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA--------------AKQCPALE 68
++ ++A V Q T AA + + KD P +PP+ A AK PA+E
Sbjct: 386 IIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVE 445
Query: 69 VTWPEVEVPLSWAEGNLAPHPRSPALQPQQSTAAGLRLSTGPAAAQP 115
+P P AP P + P Q T ++ T ++P
Sbjct: 446 -NYPPPPAPAPTDGSEPAPAPVADGDIPSQFTRVMGKVCTQLLVSRP 491
>gi|169209613 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 30.8 bits (68), Expect = 0.24
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 15/67 (22%)
Query: 31 TPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVE---------VPLSWA 81
TP + T A TK P P PV P + C TWPE + VP S A
Sbjct: 265 TPPALVDTMAQMDTLLTKQPAPQTIPVVP--QSC----ATWPETQLCHASDTMTVPFSIA 318
Query: 82 EGNLAPH 88
NL H
Sbjct: 319 TNNLQYH 325
>gi|169210642 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 30.8 bits (68), Expect = 0.24
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 15/67 (22%)
Query: 31 TPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVE---------VPLSWA 81
TP + T A TK P P PV P + C TWPE + VP S A
Sbjct: 265 TPPALVDTMAQMDTLLTKQPAPQTIPVVP--QSC----ATWPETQLCHASDTMTVPFSIA 318
Query: 82 EGNLAPH 88
NL H
Sbjct: 319 TNNLQYH 325
>gi|169210176 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 30.8 bits (68), Expect = 0.24
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 15/67 (22%)
Query: 31 TPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVE---------VPLSWA 81
TP + T A TK P P PV P + C TWPE + VP S A
Sbjct: 265 TPPALVDTMAQMDTLLTKQPAPQTIPVVP--QSC----ATWPETQLCHASDTMTVPFSIA 318
Query: 82 EGNLAPH 88
NL H
Sbjct: 319 TNNLQYH 325
>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
Length = 1337
Score = 30.8 bits (68), Expect = 0.24
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 10/49 (20%)
Query: 50 PCPSQPPVFPAAKQCPALEVTWPEVEVPLSWAEGNLAPHPRSPALQPQQ 98
PCP+ PPV P A P + T+P + P S PHP P + PQQ
Sbjct: 125 PCPNNPPV-PGA---PPGQGTFPFMMPPPSM------PHPPPPPVMPQQ 163
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 30.8 bits (68), Expect = 0.24
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 10/49 (20%)
Query: 50 PCPSQPPVFPAAKQCPALEVTWPEVEVPLSWAEGNLAPHPRSPALQPQQ 98
PCP+ PPV P A P + T+P + P S PHP P + PQQ
Sbjct: 125 PCPNNPPV-PGA---PPGQGTFPFMMPPPSM------PHPPPPPVMPQQ 163
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 30.4 bits (67), Expect = 0.31
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 30 ATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPAL--EVTWPEVEVPLS-WAEGNLA 86
ATP SQ + A P+ PP+ P+A P + P ++VP S A ++
Sbjct: 689 ATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMS 748
Query: 87 PHPRSPALQPQQSTAAGLRLSTGPAAAQP 115
P P P A L++ P A+ P
Sbjct: 749 PSATPPPRVPPLLAAPPLQVPPSPPASLP 777
Score = 28.9 bits (63), Expect = 0.92
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 30 ATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVPLSWAEGNLAPHP 89
A P QT + A+ S P + PP+ Q P T P ++VP S +L P
Sbjct: 350 APPSLQTLPSPPATPPSQAPPSMTTPPM-----QAPPSLQTIPPIQVPHSLTSPSLQAPP 404
Query: 90 RSPALQPQQSTAA 102
AL Q+T +
Sbjct: 405 SPLALSSLQATTS 417
Score = 28.9 bits (63), Expect = 0.92
Identities = 28/88 (31%), Positives = 34/88 (38%), Gaps = 8/88 (9%)
Query: 30 ATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVPLSWA--EGNLAP 87
A P QT +A + PCP+ P+ Q P +T P E P S A P
Sbjct: 542 APPPLQTASAPLTTPHLETPPCPAPCPL-----QAPPSPLTTPPPETPSSIATPPPQAPP 596
Query: 88 HPRSPALQPQQSTAAGLRLSTGPAAAQP 115
SP LQ S L+T P A P
Sbjct: 597 ALASPPLQGLPSPPLS-PLATPPPQAPP 623
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 30.4 bits (67), Expect = 0.31
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 28 VRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCP 65
V T + TTT TA+ K P P+ PP P AK P
Sbjct: 749 VAVTTTTTTTTTTTATQEEEKKPPPALPPPPPLAKFPP 786
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 30.0 bits (66), Expect = 0.41
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 32 PVSQTTTAATASVRSTKDPCPSQPPVFP--AAKQCPALEVTWPEVEVPLSWAEGNLAPHP 89
P + +T++ AS+ ST P P PP P A Q PA+ P PL A G L P P
Sbjct: 332 PSALSTSSLRASMTSTPPP-PVPPPPPPPATALQAPAV----PPPPAPLQIAPGVLHPAP 386
Query: 90 ---RSPALQPQQSTA 101
P +QP A
Sbjct: 387 PPIAPPLVQPSPPVA 401
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 30.0 bits (66), Expect = 0.41
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 32 PVSQTTTAATASVRSTKDPCPSQPPVFP--AAKQCPALEVTWPEVEVPLSWAEGNLAPHP 89
P + +T++ AS+ ST P P PP P A Q PA+ P PL A G L P P
Sbjct: 332 PSALSTSSLRASMTSTPPP-PVPPPPPPPATALQAPAV----PPPPAPLQIAPGVLHPAP 386
Query: 90 ---RSPALQPQQSTA 101
P +QP A
Sbjct: 387 PPIAPPLVQPSPPVA 401
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 30.0 bits (66), Expect = 0.41
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 32 PVSQTTTAATASVRSTKDPCPSQPPVFP--AAKQCPALEVTWPEVEVPLSWAEGNLAPHP 89
P + +T++ AS+ ST P P PP P A Q PA+ P PL A G L P P
Sbjct: 332 PSALSTSSLRASMTSTPPP-PVPPPPPPPATALQAPAV----PPPPAPLQIAPGVLHPAP 386
Query: 90 ---RSPALQPQQSTA 101
P +QP A
Sbjct: 387 PPIAPPLVQPSPPVA 401
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 30.0 bits (66), Expect = 0.41
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 32 PVSQTTTAATASVRSTKDPCPSQPPVFP--AAKQCPALEVTWPEVEVPLSWAEGNLAPHP 89
P + +T++ AS+ ST P P PP P A Q PA+ P PL A G L P P
Sbjct: 332 PSALSTSSLRASMTSTPPP-PVPPPPPPPATALQAPAV----PPPPAPLQIAPGVLHPAP 386
Query: 90 ---RSPALQPQQSTA 101
P +QP A
Sbjct: 387 PPIAPPLVQPSPPVA 401
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.126 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,272,011
Number of Sequences: 37866
Number of extensions: 253696
Number of successful extensions: 1731
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 1626
Number of HSP's gapped (non-prelim): 236
length of query: 115
length of database: 18,247,518
effective HSP length: 85
effective length of query: 30
effective length of database: 15,028,908
effective search space: 450867240
effective search space used: 450867240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.