Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 222144328
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222144328 myosin regulatory light chain MRCL2 isoform B
[Homo sapiens]
(154 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo... 317 3e-87
gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo... 312 8e-86
gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo... 312 8e-86
gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo ... 312 8e-86
gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric [... 310 3e-85
gi|29568111 myosin regulatory light chain 9 isoform a [Homo sapi... 296 6e-81
gi|88981341 PREDICTED: similar to myosin regulatory light chain ... 284 2e-77
gi|51464364 PREDICTED: similar to myosin regulatory light chain ... 284 2e-77
gi|169167243 PREDICTED: similar to myosin regulatory light chain... 281 2e-76
gi|94981553 slow cardiac myosin regulatory light chain 2 [Homo s... 178 2e-45
gi|28372499 myosin light chain, phosphorylatable, fast skeletal ... 176 9e-45
gi|4505305 myosin regulatory light chain 5 [Homo sapiens] 168 1e-42
gi|34147532 myosin, light chain 10, regulatory [Homo sapiens] 156 8e-39
gi|10864037 myosin light chain 2a [Homo sapiens] 156 8e-39
gi|31563524 myosin regulatory light chain 9 isoform b [Homo sapi... 137 5e-33
gi|58218968 calmodulin 3 [Homo sapiens] 125 2e-29
gi|4502549 calmodulin 2 [Homo sapiens] 125 2e-29
gi|5901912 calmodulin 1 [Homo sapiens] 125 2e-29
gi|4885111 calmodulin-like 3 [Homo sapiens] 115 1e-26
gi|4757974 centrin 1 [Homo sapiens] 84 4e-17
gi|4757902 caltractin [Homo sapiens] 84 5e-17
gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens] 84 5e-17
gi|223278387 calmodulin-like 5 [Homo sapiens] 78 3e-15
gi|4507617 fast skeletal muscle troponin C [Homo sapiens] 74 4e-14
gi|4505303 smooth muscle and non-muscle myosin alkali light chai... 72 2e-13
gi|88999583 myosin, light chain 6, alkali, smooth muscle and non... 71 3e-13
gi|17986275 fast skeletal myosin alkali light chain 1 isoform 3f... 69 1e-12
gi|17986258 myosin, light chain 6, alkali, smooth muscle and non... 69 1e-12
gi|17986273 fast skeletal myosin alkali light chain 1 isoform 1f... 69 2e-12
gi|4507615 troponin C, slow [Homo sapiens] 67 5e-12
>gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo
sapiens]
Length = 154
Score = 317 bits (811), Expect = 3e-87
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MSSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAP 60
MSSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAP
Sbjct: 1 MSSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAP 60
Query: 61 GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEE 120
GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEE
Sbjct: 61 GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEE 120
Query: 121 VDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 154
VDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
Sbjct: 121 VDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 154
>gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 312 bits (799), Expect = 8e-86
Identities = 151/153 (98%), Positives = 153/153 (100%)
Query: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG 61
S++FAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG
Sbjct: 20 SNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG 79
Query: 62 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 121
PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV
Sbjct: 80 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 139
Query: 122 DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 154
DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
Sbjct: 140 DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 172
>gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 312 bits (799), Expect = 8e-86
Identities = 151/153 (98%), Positives = 153/153 (100%)
Query: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG 61
S++FAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG
Sbjct: 20 SNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG 79
Query: 62 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 121
PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV
Sbjct: 80 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 139
Query: 122 DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 154
DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
Sbjct: 140 DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 172
>gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 312 bits (799), Expect = 8e-86
Identities = 151/153 (98%), Positives = 153/153 (100%)
Query: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG 61
S++FAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG
Sbjct: 20 SNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG 79
Query: 62 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 121
PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV
Sbjct: 80 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 139
Query: 122 DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 154
DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
Sbjct: 140 DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 172
>gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric
[Homo sapiens]
Length = 171
Score = 310 bits (794), Expect = 3e-85
Identities = 150/153 (98%), Positives = 152/153 (99%)
Query: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG 61
S++FAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTD YLDAMMNEAPG
Sbjct: 19 SNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLDAMMNEAPG 78
Query: 62 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 121
PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV
Sbjct: 79 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 138
Query: 122 DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 154
DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
Sbjct: 139 DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 171
>gi|29568111 myosin regulatory light chain 9 isoform a [Homo
sapiens]
Length = 172
Score = 296 bits (757), Expect = 6e-81
Identities = 141/153 (92%), Positives = 149/153 (97%)
Query: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG 61
S++FAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTD YL+ MM+EAPG
Sbjct: 20 SNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLEGMMSEAPG 79
Query: 62 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 121
PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEA+G I ED+LRELLTTMGDRFTDEEV
Sbjct: 80 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEV 139
Query: 122 DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 154
DE+YREAPIDKKGNFNY+EFTRILKHGAKDKDD
Sbjct: 140 DEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 172
>gi|88981341 PREDICTED: similar to myosin regulatory light chain
MRCL2 [Homo sapiens]
Length = 377
Score = 284 bits (727), Expect = 2e-77
Identities = 138/153 (90%), Positives = 143/153 (93%)
Query: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG 61
S +FA FDQSQIQEFKEAFNMIDQNRDGFI KEDLH MLASLGKNPTDA LDA+MNEAPG
Sbjct: 225 SKVFATFDQSQIQEFKEAFNMIDQNRDGFISKEDLHGMLASLGKNPTDACLDAVMNEAPG 284
Query: 62 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 121
PINFTM L MFG+KLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTT+GD+FTDEEV
Sbjct: 285 PINFTMLLAMFGKKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTVGDQFTDEEV 344
Query: 122 DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 154
DELY EAPIDKKGNFNYIEFT ILKHG KDKDD
Sbjct: 345 DELYTEAPIDKKGNFNYIEFTSILKHGVKDKDD 377
>gi|51464364 PREDICTED: similar to myosin regulatory light chain
MRCL2 [Homo sapiens]
Length = 377
Score = 284 bits (727), Expect = 2e-77
Identities = 138/153 (90%), Positives = 143/153 (93%)
Query: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG 61
S +FA FDQSQIQEFKEAFNMIDQNRDGFI KEDLH MLASLGKNPTDA LDA+MNEAPG
Sbjct: 225 SKVFATFDQSQIQEFKEAFNMIDQNRDGFISKEDLHGMLASLGKNPTDACLDAVMNEAPG 284
Query: 62 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 121
PINFTM L MFG+KLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTT+GD+FTDEEV
Sbjct: 285 PINFTMLLAMFGKKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTVGDQFTDEEV 344
Query: 122 DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 154
DELY EAPIDKKGNFNYIEFT ILKHG KDKDD
Sbjct: 345 DELYTEAPIDKKGNFNYIEFTSILKHGVKDKDD 377
>gi|169167243 PREDICTED: similar to myosin regulatory light chain
MRCL2 [Homo sapiens]
Length = 377
Score = 281 bits (719), Expect = 2e-76
Identities = 137/153 (89%), Positives = 142/153 (92%)
Query: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG 61
S +FA FDQSQIQEFKEAFNMIDQNRDGFI KEDLH MLASLGKNPTDA LDA+MNEAPG
Sbjct: 225 SKVFATFDQSQIQEFKEAFNMIDQNRDGFISKEDLHGMLASLGKNPTDACLDAVMNEAPG 284
Query: 62 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 121
PINFTM L MFG+KLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTT+GD+FTDEEV
Sbjct: 285 PINFTMLLAMFGKKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTVGDQFTDEEV 344
Query: 122 DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 154
DELY EA IDKKGNFNYIEFT ILKHG KDKDD
Sbjct: 345 DELYTEASIDKKGNFNYIEFTSILKHGVKDKDD 377
>gi|94981553 slow cardiac myosin regulatory light chain 2 [Homo
sapiens]
Length = 166
Score = 178 bits (451), Expect = 2e-45
Identities = 86/153 (56%), Positives = 113/153 (73%), Gaps = 2/153 (1%)
Query: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGK-NPTDAYLDAMMNEAP 60
S++F+MF+Q+QIQEFKEAF ++DQNRDGFIDK DL D A+LG+ N + +D M+ EAP
Sbjct: 15 SNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMIKEAP 74
Query: 61 GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEE 120
GPINFT+FLTMFGEKL G DPE+ I NAF FD E G ++ DY+RE+LTT +RF+ EE
Sbjct: 75 GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVREMLTTQAERFSKEE 134
Query: 121 VDELYREAPIDKKGNFNYIEFTRILKHGAKDKD 153
VD+++ P D GN +Y I+ HG ++KD
Sbjct: 135 VDQMFAAFPPDVTGNLDYKNLVHIITHG-EEKD 166
>gi|28372499 myosin light chain, phosphorylatable, fast skeletal
muscle [Homo sapiens]
Length = 169
Score = 176 bits (445), Expect = 9e-45
Identities = 90/154 (58%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Query: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGK-NPTDAYLDAMMNEAP 60
SS+F+MFDQ+QIQEFKEAF +IDQNRDG IDKEDL D A++G+ N + LDAMM EA
Sbjct: 16 SSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEAS 75
Query: 61 GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEE 120
GPINFT+FLTMFGEKL G DPEDVI AF D E GTI++ +L ELLTT DRF+ EE
Sbjct: 76 GPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEE 135
Query: 121 VDELYREAPIDKKGNFNYIEFTRILKHG-AKDKD 153
+ ++ P D GN +Y ++ HG AKD++
Sbjct: 136 IKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169
>gi|4505305 myosin regulatory light chain 5 [Homo sapiens]
Length = 173
Score = 168 bits (426), Expect = 1e-42
Identities = 82/153 (53%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGK-NPTDAYLDAMMNEAP 60
S++F+ F+Q+QIQEFKEAF ++DQNRDGFIDKEDL D ASLGK N D LDAM+ EA
Sbjct: 21 SNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDTYASLGKTNVKDDELDAMLKEAS 80
Query: 61 GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEE 120
GPINFTMFL +FGEKL+GTD E+ I NAF D + G I ++Y++ LL + D+ T EE
Sbjct: 81 GPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKGKINKEYIKRLLMSQADKMTAEE 140
Query: 121 VDELYREAPIDKKGNFNYIEFTRILKHGAKDKD 153
VD++++ A ID GN +Y + ++ HG + ++
Sbjct: 141 VDQMFQFASIDVAGNLDYKALSYVITHGEEKEE 173
>gi|34147532 myosin, light chain 10, regulatory [Homo sapiens]
Length = 226
Score = 156 bits (394), Expect = 8e-39
Identities = 86/187 (45%), Positives = 113/187 (60%), Gaps = 36/187 (19%)
Query: 2 SSMFAMFDQSQIQEFKE----------------------------------AFNMIDQNR 27
S++F+MFDQSQIQEFKE AF ++DQNR
Sbjct: 41 SNVFSMFDQSQIQEFKESLALSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNR 100
Query: 28 DGFIDKEDLHDMLASLGK-NPTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIR 86
DGFIDKEDL D A+LG+ N + L+AM+ EAPGPINFT+FLTMFGEKL GTDPE+ I
Sbjct: 101 DGFIDKEDLRDTFAALGRINVKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETIL 160
Query: 87 NAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILK 146
+AF FD E G ++ D ++E L T DRF++EEV +++ P D GN +Y ++
Sbjct: 161 HAFKVFDTEGKGFVKADVIKEKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVIT 220
Query: 147 HGAKDKD 153
HG ++KD
Sbjct: 221 HG-EEKD 226
>gi|10864037 myosin light chain 2a [Homo sapiens]
Length = 175
Score = 156 bits (394), Expect = 8e-39
Identities = 75/153 (49%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGK-NPTDAYLDAMMNEAP 60
S++F+MF+Q+QIQEFKEAF+ IDQNRDG I K DL + + LGK + + LDAM+ E
Sbjct: 23 SNVFSMFEQAQIQEFKEAFSCIDQNRDGIICKADLRETYSQLGKVSVPEEELDAMLQEGK 82
Query: 61 GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEE 120
GPINFT+FLT+FGEKLNGTDPE+ I +AF FD G + +D ++LL T D+F+ E
Sbjct: 83 GPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKGVVNKDEFKQLLLTQADKFSPAE 142
Query: 121 VDELYREAPIDKKGNFNYIEFTRILKHGAKDKD 153
V++++ P+D GN +Y I+ HG + ++
Sbjct: 143 VEQMFALTPMDLAGNIDYKSLCYIITHGDEKEE 175
>gi|31563524 myosin regulatory light chain 9 isoform b [Homo
sapiens]
Length = 118
Score = 137 bits (344), Expect = 5e-33
Identities = 80/153 (52%), Positives = 90/153 (58%), Gaps = 54/153 (35%)
Query: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG 61
S++FAMFDQSQIQEFKEAFNMIDQNR D ++D
Sbjct: 20 SNVFAMFDQSQIQEFKEAFNMIDQNR---------------------DGFIDK------- 51
Query: 62 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 121
D D++ + G I ED+LRELLTTMGDRFTDEEV
Sbjct: 52 -----------------EDLHDMLASL---------GFIHEDHLRELLTTMGDRFTDEEV 85
Query: 122 DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 154
DE+YREAPIDKKGNFNY+EFTRILKHGAKDKDD
Sbjct: 86 DEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 118
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 125 bits (313), Expect = 2e-29
Identities = 64/140 (45%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
Query: 10 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAP----GPINF 65
+ QI EFKEAF++ D++ DG I ++L ++ SLG+NPT+A L M+NE G I+F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 66 TMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELY 125
FLTM K+ TD E+ IR AF FD++ G I LR ++T +G++ TDEEVDE+
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 126 REAPIDKKGNFNYIEFTRIL 145
REA ID G NY EF +++
Sbjct: 127 READIDGDGQVNYEEFVQMM 146
Score = 44.7 bits (104), Expect = 3e-05
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 7 MFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEA----PGP 62
M D +E +EAF + D++ +G+I +L ++ +LG+ TD +D M+ EA G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 63 INFTMFLTMFGEK 75
+N+ F+ M K
Sbjct: 137 VNYEEFVQMMTAK 149
Score = 42.0 bits (97), Expect = 2e-04
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 86 RNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRIL 145
+ AF+ FD++ GTI L ++ ++G T+ E+ ++ E D G ++ EF ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 146 KHGAKDKD 153
KD D
Sbjct: 74 ARKMKDTD 81
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 125 bits (313), Expect = 2e-29
Identities = 64/140 (45%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
Query: 10 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAP----GPINF 65
+ QI EFKEAF++ D++ DG I ++L ++ SLG+NPT+A L M+NE G I+F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 66 TMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELY 125
FLTM K+ TD E+ IR AF FD++ G I LR ++T +G++ TDEEVDE+
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 126 REAPIDKKGNFNYIEFTRIL 145
REA ID G NY EF +++
Sbjct: 127 READIDGDGQVNYEEFVQMM 146
Score = 44.7 bits (104), Expect = 3e-05
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 7 MFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEA----PGP 62
M D +E +EAF + D++ +G+I +L ++ +LG+ TD +D M+ EA G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 63 INFTMFLTMFGEK 75
+N+ F+ M K
Sbjct: 137 VNYEEFVQMMTAK 149
Score = 42.0 bits (97), Expect = 2e-04
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 86 RNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRIL 145
+ AF+ FD++ GTI L ++ ++G T+ E+ ++ E D G ++ EF ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 146 KHGAKDKD 153
KD D
Sbjct: 74 ARKMKDTD 81
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 125 bits (313), Expect = 2e-29
Identities = 64/140 (45%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
Query: 10 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAP----GPINF 65
+ QI EFKEAF++ D++ DG I ++L ++ SLG+NPT+A L M+NE G I+F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 66 TMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELY 125
FLTM K+ TD E+ IR AF FD++ G I LR ++T +G++ TDEEVDE+
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 126 REAPIDKKGNFNYIEFTRIL 145
REA ID G NY EF +++
Sbjct: 127 READIDGDGQVNYEEFVQMM 146
Score = 44.7 bits (104), Expect = 3e-05
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 7 MFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEA----PGP 62
M D +E +EAF + D++ +G+I +L ++ +LG+ TD +D M+ EA G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 63 INFTMFLTMFGEK 75
+N+ F+ M K
Sbjct: 137 VNYEEFVQMMTAK 149
Score = 42.0 bits (97), Expect = 2e-04
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 86 RNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRIL 145
+ AF+ FD++ GTI L ++ ++G T+ E+ ++ E D G ++ EF ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 146 KHGAKDKD 153
KD D
Sbjct: 74 ARKMKDTD 81
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 115 bits (289), Expect = 1e-26
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
Query: 10 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAP----GPINF 65
+ Q+ EFKEAF++ D++ DG I +L ++ SLG+NPT+A L MM+E G ++F
Sbjct: 7 EEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDF 66
Query: 66 TMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELY 125
FL M K+ TD E+ IR AF FD++ G + LR ++T +G++ +DEEVDE+
Sbjct: 67 PEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMI 126
Query: 126 REAPIDKKGNFNYIEFTRIL 145
R A D G NY EF R+L
Sbjct: 127 RAADTDGDGQVNYEEFVRVL 146
Score = 39.3 bits (90), Expect = 0.001
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 7 MFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEA----PGP 62
M D +E +EAF + D++ +GF+ +L ++ LG+ +D +D M+ A G
Sbjct: 77 MKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQ 136
Query: 63 INFTMFLTMFGEK 75
+N+ F+ + K
Sbjct: 137 VNYEEFVRVLVSK 149
Score = 36.6 bits (83), Expect = 0.009
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 86 RNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRIL 145
+ AF+ FD++ G I L ++ ++G T+ E+ ++ E D G ++ EF ++
Sbjct: 14 KEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMM 73
Query: 146 KHGAKDKDD 154
KD D+
Sbjct: 74 ARKMKDTDN 82
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 84.3 bits (207), Expect = 4e-17
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
Query: 10 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAP----GPINF 65
+ Q QE +EAF++ D + G ID ++L + +LG P + M++E G I+F
Sbjct: 27 EDQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGKISF 86
Query: 66 TMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELY 125
FL + +K++ D ++ I AF FD++ TG I L+ + +G+ TDEE+ E+
Sbjct: 87 NDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGENLTDEELQEMI 146
Query: 126 REAPIDKKGNFNYIEFTRILK 146
EA D G N EF RI+K
Sbjct: 147 DEADRDGDGEVNEEEFLRIMK 167
Score = 37.0 bits (84), Expect = 0.007
Identities = 18/74 (24%), Positives = 35/74 (47%)
Query: 80 DPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYI 139
D + +R AF FD + +GTI L+ + +G EE+ ++ E + G ++
Sbjct: 28 DQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGKISFN 87
Query: 140 EFTRILKHGAKDKD 153
+F ++ +KD
Sbjct: 88 DFLAVMTQKMSEKD 101
Score = 33.1 bits (74), Expect = 0.097
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 7 MFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEA----PGP 62
M ++ +E +AF + D + G I ++L + LG+N TD L M++EA G
Sbjct: 97 MSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGENLTDEELQEMIDEADRDGDGE 156
Query: 63 INFTMFL 69
+N FL
Sbjct: 157 VNEEEFL 163
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 84.0 bits (206), Expect = 5e-17
Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 10 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNE----APGPINF 65
+ Q QE +EAF++ D + G ID ++L + +LG P + M++E G +NF
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 86
Query: 66 TMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELY 125
FLT+ +K++ D ++ I AF FD++ TG I L+ + +G+ TDEE+ E+
Sbjct: 87 GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMI 146
Query: 126 REAPIDKKGNFNYIEFTRILK 146
EA D G + EF RI+K
Sbjct: 147 DEADRDGDGEVSEQEFLRIMK 167
Score = 39.3 bits (90), Expect = 0.001
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 85 IRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRI 144
IR AF FD + TGTI L+ + +G EE+ ++ E + G N+ +F +
Sbjct: 33 IREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTV 92
Query: 145 LKHGAKDKD 153
+ +KD
Sbjct: 93 MTQKMSEKD 101
Score = 32.7 bits (73), Expect = 0.13
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 7 MFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEA 59
M ++ +E +AF + D + G I ++L + LG+N TD L M++EA
Sbjct: 97 MSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA 149
>gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens]
Length = 196
Score = 84.0 bits (206), Expect = 5e-17
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 4 MFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMN----EA 59
M Q QI E+KE F++ D+ + G I DL + LG +PT + + +
Sbjct: 44 MAKFLSQDQINEYKECFSLYDKQQRGKIKATDLMVAMRCLGASPTPGEVQRHLQTHGIDG 103
Query: 60 PGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDE 119
G ++F+ FLT+ ++ DP+ I A D+E G + LR LT++G++ T +
Sbjct: 104 NGELDFSTFLTIMHMQIKQEDPKKEILLAMLMVDKEKKGYVMASDLRSKLTSLGEKLTHK 163
Query: 120 EVDELYREAPIDKKGNFNYIEF 141
EVD+L+REA I+ G Y EF
Sbjct: 164 EVDDLFREADIEPNGKVKYDEF 185
>gi|223278387 calmodulin-like 5 [Homo sapiens]
Length = 146
Score = 77.8 bits (190), Expect = 3e-15
Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
Query: 15 EFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAP----GPINFTMFLT 70
++K+AF+ +D + +G I+ ++L L + GKN ++A L +++E G I+F FLT
Sbjct: 12 QYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDGDGEISFQEFLT 71
Query: 71 MFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPI 130
+ G + V AF FD++ G I D LR + +G EE+D + REA +
Sbjct: 72 AAKKARAGLEDLQV---AFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADV 128
Query: 131 DKKGNFNYIEFTRIL 145
D+ G NY EF R+L
Sbjct: 129 DQDGRVNYEEFARML 143
Score = 38.1 bits (87), Expect = 0.003
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 13 IQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEA----PGPINFTMF 68
+++ + AF DQ+ DG I ++L +A LG+ LDAM+ EA G +N+ F
Sbjct: 80 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 139
Query: 69 LTMFGEK 75
M ++
Sbjct: 140 ARMLAQE 146
Score = 32.0 bits (71), Expect = 0.22
Identities = 18/75 (24%), Positives = 30/75 (40%)
Query: 80 DPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYI 139
+ E + AF+ D + GTI L L G ++ ++ +L E D G ++
Sbjct: 8 EEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDGDGEISFQ 67
Query: 140 EFTRILKHGAKDKDD 154
EF K +D
Sbjct: 68 EFLTAAKKARAGLED 82
>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
Length = 160
Score = 74.3 bits (181), Expect = 4e-14
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 10 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAP----GPINF 65
+ I EFK AF+M D + G I ++L ++ LG+ PT LDA++ E G I+F
Sbjct: 14 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDF 73
Query: 66 TMFLTMFGEKLNGT---DPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVD 122
FL M ++ E+ + F FD A G I + L E+ G+ TDEE++
Sbjct: 74 EEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDEEIE 133
Query: 123 ELYREAPIDKKGNFNYIEFTRILK 146
L ++ + G ++ EF ++++
Sbjct: 134 SLMKDGDKNNDGRIDFDEFLKMME 157
Score = 35.0 bits (79), Expect = 0.025
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 88 AFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEF----TR 143
AF FD + G I L ++ +G T EE+D + E D G ++ EF R
Sbjct: 23 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 82
Query: 144 ILKHGAKDKDD 154
+K AK K +
Sbjct: 83 QMKEDAKGKSE 93
>gi|4505303 smooth muscle and non-muscle myosin alkali light chain
6B [Homo sapiens]
Length = 208
Score = 72.0 bits (175), Expect = 2e-13
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 1 MSSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAP 60
+S + F++ Q++EFKEAF + D+ DG I D++ +LG+NPT+A + ++
Sbjct: 54 LSKVVIEFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPK 113
Query: 61 GP------INFTMFLTMFG--EKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTM 112
++F FL M K G + F FD+E G + LR +LTT+
Sbjct: 114 SDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTL 173
Query: 113 GDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKH 147
G++ T+EEV E D G NY F LKH
Sbjct: 174 GEKMTEEEV-ETVLAGHEDSNGCINYEAF---LKH 204
>gi|88999583 myosin, light chain 6, alkali, smooth muscle and
non-muscle isoform 2 [Homo sapiens]
Length = 151
Score = 71.2 bits (173), Expect = 3e-13
Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 8 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDA-YLDAMMNEAPGPIN-- 64
F + Q EFKEAF + D+ DG I D++ +LG+NPT+A L + N +N
Sbjct: 4 FTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEMNVK 63
Query: 65 ---FTMFLTMFGEKLNGTDP---EDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTD 118
F FL M D ED + FD+E GT+ +R +L T+G++ T+
Sbjct: 64 VLDFEHFLPMLQTVAKNKDQGTYEDYV-EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 122
Query: 119 EEVDELYREAPIDKKGNFNYIEFTRILKHG 148
EEV E+ D G NY E R++ +G
Sbjct: 123 EEV-EMLVAGHEDSNGCINYEELVRMVLNG 151
>gi|17986275 fast skeletal myosin alkali light chain 1 isoform 3f
[Homo sapiens]
Length = 150
Score = 69.3 bits (168), Expect = 1e-12
Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 8 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG------ 61
F QI EFKEAF + D+ D I + D+L +LG NPT+A + ++
Sbjct: 3 FSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAK 62
Query: 62 PINFTMFLTMFGEKLNGTDP---EDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTD 118
I F FL M N D ED + FD+E GT+ LR +L T+G++ +
Sbjct: 63 KIEFEQFLPMMQAISNNKDQATYEDFV-EGLRVFDKEGNGTVMGAELRHVLATLGEKMKE 121
Query: 119 EEVDELYREAPIDKKGNFNYIEFTR 143
EEV+ L D G NY F +
Sbjct: 122 EEVEAL-MAGQEDSNGCINYEAFVK 145
>gi|17986258 myosin, light chain 6, alkali, smooth muscle and
non-muscle isoform 1 [Homo sapiens]
Length = 151
Score = 69.3 bits (168), Expect = 1e-12
Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDA-YLDAMMNEAPGPIN-- 64
F + Q EFKEAF + D+ DG I D++ +LG+NPT+A L + N +N
Sbjct: 4 FTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEMNVK 63
Query: 65 ---FTMFLTMFGEKLNGTDP---EDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTD 118
F FL M D ED + FD+E GT+ +R +L T+G++ T+
Sbjct: 64 VLDFEHFLPMLQTVAKNKDQGTYEDYV-EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 122
Query: 119 EEVDELYREAPIDKKGNFNYIEFTRILKHG 148
EEV E+ D G NY F R + G
Sbjct: 123 EEV-EMLVAGHEDSNGCINYEAFVRHILSG 151
>gi|17986273 fast skeletal myosin alkali light chain 1 isoform 1f
[Homo sapiens]
Length = 194
Score = 68.6 bits (166), Expect = 2e-12
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 1 MSSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAP 60
+S++ F + Q EFKEAF + D+ D I + D+L +LG NPT+A + ++
Sbjct: 40 LSAIKIEFSKEQQDEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPS 99
Query: 61 G------PINFTMFLTMFGEKLNGTDP---EDVIRNAFACFDEEATGTIQEDYLRELLTT 111
I F FL M N D ED + FD+E GT+ LR +L T
Sbjct: 100 NEELNAKKIEFEQFLPMMQAISNNKDQATYEDFV-EGLRVFDKEGNGTVMGAELRHVLAT 158
Query: 112 MGDRFTDEEVDELYREAPIDKKGNFNYIEFTR 143
+G++ +EEV+ L D G NY F +
Sbjct: 159 LGEKMKEEEVEAL-MAGQEDSNGCINYEAFVK 189
>gi|4507615 troponin C, slow [Homo sapiens]
Length = 161
Score = 67.4 bits (163), Expect = 5e-12
Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 10 QSQIQEFKEAFNMIDQN-RDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAP----GPIN 64
+ Q EFK AF++ DG I ++L ++ LG+NPT L M++E G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 65 FTMFLTMFGEKLNGTDP---EDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 121
F FL M + E+ + + F FD+ A G I D L+ +L G+ T++++
Sbjct: 74 FDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDI 133
Query: 122 DELYREAPIDKKGNFNYIEFTRILK 146
+EL ++ + G +Y EF +K
Sbjct: 134 EELMKDGDKNNDGRIDYDEFLEFMK 158
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,666,362
Number of Sequences: 37866
Number of extensions: 250609
Number of successful extensions: 816
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 567
Number of HSP's gapped (non-prelim): 196
length of query: 154
length of database: 18,247,518
effective HSP length: 93
effective length of query: 61
effective length of database: 14,725,980
effective search space: 898284780
effective search space used: 898284780
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.