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Search of human proteins with 222144311
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222144311 Ras-related protein RAB34 isoform 1 [Homo sapiens]
(259 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222144319 Ras-related protein RAB34 isoform 5 [Homo sapiens] 521 e-148
gi|222144311 Ras-related protein RAB34 isoform 1 [Homo sapiens] 521 e-148
gi|222144317 Ras-related protein RAB34 isoform 4 [Homo sapiens] 499 e-141
gi|222144313 Ras-related protein RAB34 isoform 2 [Homo sapiens] 499 e-141
gi|222144315 Ras-related protein RAB34 isoform 3 [Homo sapiens] 382 e-106
gi|31795535 RAB36, member RAS oncogene family [Homo sapiens] 296 2e-80
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 129 2e-30
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens] 125 4e-29
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 124 1e-28
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 124 1e-28
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 124 1e-28
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 124 1e-28
gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo sa... 121 7e-28
gi|19923483 GTPase Rab14 [Homo sapiens] 121 7e-28
gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens] 120 9e-28
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 120 1e-27
gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo sa... 119 3e-27
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 117 1e-26
gi|50234889 RAB43 protein [Homo sapiens] 112 2e-25
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens] 112 4e-25
gi|16933567 mel transforming oncogene [Homo sapiens] 111 7e-25
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 109 3e-24
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens] 108 4e-24
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa... 108 4e-24
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens] 108 5e-24
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 106 2e-23
gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s... 106 2e-23
gi|117938299 RAB6C-like [Homo sapiens] 106 2e-23
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 106 2e-23
gi|40255119 RAS and EF-hand domain containing [Homo sapiens] 106 2e-23
>gi|222144319 Ras-related protein RAB34 isoform 5 [Homo sapiens]
Length = 316
Score = 521 bits (1341), Expect = e-148
Identities = 259/259 (100%), Positives = 259/259 (100%)
Query: 1 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD 60
MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD
Sbjct: 58 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD 117
Query: 61 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 120
LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST
Sbjct: 118 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 177
Query: 121 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALME 180
YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALME
Sbjct: 178 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALME 237
Query: 181 KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN 240
KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN
Sbjct: 238 KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN 297
Query: 241 SDDSNLYLTASKKKPTCCP 259
SDDSNLYLTASKKKPTCCP
Sbjct: 298 SDDSNLYLTASKKKPTCCP 316
>gi|222144311 Ras-related protein RAB34 isoform 1 [Homo sapiens]
Length = 259
Score = 521 bits (1341), Expect = e-148
Identities = 259/259 (100%), Positives = 259/259 (100%)
Query: 1 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD 60
MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD
Sbjct: 1 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD 60
Query: 61 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 120
LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST
Sbjct: 61 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 120
Query: 121 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALME 180
YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALME
Sbjct: 121 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALME 180
Query: 181 KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN 240
KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN
Sbjct: 181 KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN 240
Query: 241 SDDSNLYLTASKKKPTCCP 259
SDDSNLYLTASKKKPTCCP
Sbjct: 241 SDDSNLYLTASKKKPTCCP 259
>gi|222144317 Ras-related protein RAB34 isoform 4 [Homo sapiens]
Length = 251
Score = 499 bits (1284), Expect = e-141
Identities = 251/259 (96%), Positives = 251/259 (96%), Gaps = 8/259 (3%)
Query: 1 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD 60
MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD
Sbjct: 1 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD 60
Query: 61 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 120
LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST
Sbjct: 61 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 120
Query: 121 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALME 180
YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL TPAQYALME
Sbjct: 121 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL--------TPAQYALME 172
Query: 181 KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN 240
KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN
Sbjct: 173 KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN 232
Query: 241 SDDSNLYLTASKKKPTCCP 259
SDDSNLYLTASKKKPTCCP
Sbjct: 233 SDDSNLYLTASKKKPTCCP 251
>gi|222144313 Ras-related protein RAB34 isoform 2 [Homo sapiens]
Length = 308
Score = 499 bits (1284), Expect = e-141
Identities = 251/259 (96%), Positives = 251/259 (96%), Gaps = 8/259 (3%)
Query: 1 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD 60
MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD
Sbjct: 58 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD 117
Query: 61 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 120
LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST
Sbjct: 118 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 177
Query: 121 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALME 180
YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL TPAQYALME
Sbjct: 178 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL--------TPAQYALME 229
Query: 181 KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN 240
KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN
Sbjct: 230 KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN 289
Query: 241 SDDSNLYLTASKKKPTCCP 259
SDDSNLYLTASKKKPTCCP
Sbjct: 290 SDDSNLYLTASKKKPTCCP 308
>gi|222144315 Ras-related protein RAB34 isoform 3 [Homo sapiens]
Length = 268
Score = 382 bits (981), Expect = e-106
Identities = 191/192 (99%), Positives = 191/192 (99%), Gaps = 1/192 (0%)
Query: 1 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVG-FKISKVIVVG 59
MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVG FKISKVIVVG
Sbjct: 58 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGRFKISKVIVVG 117
Query: 60 DLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAS 119
DLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAS
Sbjct: 118 DLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAS 177
Query: 120 TYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALM 179
TYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALM
Sbjct: 178 TYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALM 237
Query: 180 EKDALQVAQEMK 191
EKDALQVAQEMK
Sbjct: 238 EKDALQVAQEMK 249
>gi|31795535 RAB36, member RAS oncogene family [Homo sapiens]
Length = 333
Score = 296 bits (757), Expect = 2e-80
Identities = 148/260 (56%), Positives = 190/260 (73%), Gaps = 10/260 (3%)
Query: 6 PVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGDLSVGK 65
PV RDRV+A P+ EA L + FH +V+ ACQ TGTVG K+SKV+VVGDL VGK
Sbjct: 77 PVSRDRVIASFPKWYTPEACLQLREHFHGQVSAACQRRNTGTVGLKLSKVVVVGDLYVGK 136
Query: 66 TCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYRGA 125
T LI+RFCK+ FD++YKATIGVDFE+ERFE+ GIP+SLQ+WDTAGQE+FKCIAS YYRGA
Sbjct: 137 TSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGA 196
Query: 126 QAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALMEKDALQ 185
Q II F+L DV +LEHT+QWL DAL+EN+ S +FLVG+KKDL + A E DA+
Sbjct: 197 QVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVH 256
Query: 186 VAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRI----GDVVRINS 241
+A+EM+AEYW+VS+ TGENV+ FF RVAAL FE +VL +LE+ + R+ GD++++
Sbjct: 257 LAREMQAEYWSVSAKTGENVKAFFSRVAALAFEQSVLQDLERQSSARLQVGNGDLIQMEG 316
Query: 242 DDSNLYLTASKKKPT---CC 258
T K+P+ CC
Sbjct: 317 SPPE---TQESKRPSSLGCC 333
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 129 bits (325), Expect = 2e-30
Identities = 77/205 (37%), Positives = 117/205 (57%), Gaps = 14/205 (6%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++++GD VGKTCLI RF +D F+ Y +TIG+DF++ ++ G LQ+WDTAGQER
Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 69
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
FK I + YYRGA II+V+++ D S E+ + W+ ++KEN + V L+G+K D+
Sbjct: 70 FKTITTAYYRGAMGIILVYDITDEKSFENIQNWM-KSIKENASAGVERLLLGNKCDME-- 126
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRI 233
A+ + ++ A ++A+E ++ S+ + NV E F +A L KSG RR
Sbjct: 127 AKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR--------DILLKSGGRRS 178
Query: 234 GDVVRINSDDSNLYLTASKKKPTCC 258
G+ N S T KK C
Sbjct: 179 GNG---NKPPSTDLKTCDKKNTNKC 200
>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 125 bits (314), Expect = 4e-29
Identities = 73/205 (35%), Positives = 111/205 (54%), Gaps = 13/205 (6%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++++GD VGK+ L+ RF +TF +Y TIGVDF++ E+ G LQ+WDTAGQER
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
F+ I STYYRG +I+V+++ S + K+WL + + D V LVG+K D P
Sbjct: 70 FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD--DVCRILVGNKND--DP 125
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRI 233
+ + +DA + A +M + + S+ NV E F + L A L K ++
Sbjct: 126 ERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAK-KDNLAKQQQQQQ 184
Query: 234 GDVVRINSDDSNLYLTASKKKPTCC 258
DVV++ + SK+K CC
Sbjct: 185 NDVVKLTKN--------SKRKKRCC 201
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 124 bits (310), Expect = 1e-28
Identities = 69/182 (37%), Positives = 109/182 (59%), Gaps = 11/182 (6%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++++GD VGKTCLI RF +D F+ Y +TIG+DF++ ++ G LQ+WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
FK I + YYRGA II+ +++ D S E+ + W+ ++ EN + V L+G+K D+
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWM-KSIMENASAGVEHLLLGNKCDME-- 250
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRI 233
A+ + ++ A ++A+E ++ S+ + NV E F +A L KSG RR
Sbjct: 251 AKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR--------DILLKSGGRRS 302
Query: 234 GD 235
G+
Sbjct: 303 GN 304
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 124 bits (310), Expect = 1e-28
Identities = 69/182 (37%), Positives = 109/182 (59%), Gaps = 11/182 (6%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++++GD VGKTCLI RF +D F+ Y +TIG+DF++ ++ G LQ+WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
FK I + YYRGA II+ +++ D S E+ + W+ ++ EN + V L+G+K D+
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWM-KSIMENASAGVEHLLLGNKCDME-- 250
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRI 233
A+ + ++ A ++A+E ++ S+ + NV E F +A L KSG RR
Sbjct: 251 AKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR--------DILLKSGGRRS 302
Query: 234 GD 235
G+
Sbjct: 303 GN 304
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 124 bits (310), Expect = 1e-28
Identities = 69/182 (37%), Positives = 109/182 (59%), Gaps = 11/182 (6%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++++GD VGKTCLI RF +D F+ Y +TIG+DF++ ++ G LQ+WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
FK I + YYRGA II+ +++ D S E+ + W+ ++ EN + V L+G+K D+
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWM-KSIMENASAGVEHLLLGNKCDME-- 250
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRI 233
A+ + ++ A ++A+E ++ S+ + NV E F +A L KSG RR
Sbjct: 251 AKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR--------DILLKSGGRRS 302
Query: 234 GD 235
G+
Sbjct: 303 GN 304
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 124 bits (310), Expect = 1e-28
Identities = 74/208 (35%), Positives = 115/208 (55%), Gaps = 19/208 (9%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++++GD VGK+CL+ RF DT+ ++Y +TIGVDF++ E+ G LQ+WDTAGQER
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
F+ I S+YYRGA II+V+++ D S + KQWL + + +V LVG+K DL+T
Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQE-IDRYASENVNKLLVGNKSDLTT- 127
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRI 233
+ + A + A + + S+ NV + F +A AE++K R+
Sbjct: 128 -KKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA---------AEIKK----RM 173
Query: 234 GDVVRINSDDSNLYLTASKKKPT---CC 258
G + NL + ++ KP CC
Sbjct: 174 GPGAASGGERPNLKIDSTPVKPAGGGCC 201
>gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo
sapiens]
Length = 208
Score = 121 bits (303), Expect = 7e-28
Identities = 64/161 (39%), Positives = 100/161 (62%), Gaps = 3/161 (1%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++ +G+ SVGKT LI RF D+FD Y+ATIG+DF + + LQLWDTAGQER
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 74
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
F+ + +Y R + A ++V+++ +V S + T +W+ D E S V++ LVG+K DL+
Sbjct: 75 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERG-SDVIIMLVGNKTDLADK 133
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAA 214
Q ++ E + + A+E+ + S+ G NV++ F RVAA
Sbjct: 134 RQVSIEEGE--RKAKELNVMFIETSAKAGYNVKQLFRRVAA 172
>gi|19923483 GTPase Rab14 [Homo sapiens]
Length = 215
Score = 121 bits (303), Expect = 7e-28
Identities = 63/167 (37%), Positives = 100/167 (59%), Gaps = 3/167 (1%)
Query: 52 ISKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQ 111
I K I++GD+ VGK+CL+++F + F + TIGV+F EV G LQ+WDTAGQ
Sbjct: 11 IFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQ 70
Query: 112 ERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLS 171
ERF+ + +YYRGA ++V+++ ++ H WL DA +P++V++ L+G+K DL
Sbjct: 71 ERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII-LIGNKADLE 129
Query: 172 TPAQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFE 218
AQ + ++A Q A+E + S+ TGENV + F A ++
Sbjct: 130 --AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQ 174
>gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]
Length = 208
Score = 120 bits (302), Expect = 9e-28
Identities = 66/176 (37%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++ +G+ SVGKT LI RF D+FD Y+ATIG+DF + + LQLWDTAGQER
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
F+ + +Y R + ++V+++ ++ S + T +W+ D E S V++ LVG+K DL+
Sbjct: 75 FRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERG-SDVIIMLVGNKTDLADK 133
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSG 229
Q + E + Q A+E+ + S+ TG NV++ F RVA+ + E K G
Sbjct: 134 RQITIEEGE--QRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEG 187
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 120 bits (301), Expect = 1e-27
Identities = 64/161 (39%), Positives = 98/161 (60%), Gaps = 3/161 (1%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++++GD VGK+CL+ RF DT+ ++Y +TIGVDF++ E+ G LQ+WDTAGQER
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
F+ I S+YYRGA II+V+++ D S + KQWL + + +V LVG+K DL+T
Sbjct: 73 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQE-IDRYASENVNKLLVGNKCDLTT- 130
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAA 214
+ + A + A + + S+ NV + F +AA
Sbjct: 131 -KKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAA 170
>gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo
sapiens]
Length = 208
Score = 119 bits (298), Expect = 3e-27
Identities = 63/161 (39%), Positives = 99/161 (61%), Gaps = 3/161 (1%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++ +G+ SVGKT LI RF D+FD Y+ATIG+DF + + LQLWDTAGQER
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
F+ + +Y R + ++V+++ +V S + T +W+ D E S V++ LVG+K DL+
Sbjct: 75 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERG-SDVIIMLVGNKTDLADK 133
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAA 214
Q ++ E + + A+E+ + S+ G NV++ F RVAA
Sbjct: 134 RQVSIEEGE--RKAKELNVMFIETSAKAGYNVKQLFRRVAA 172
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 117 bits (292), Expect = 1e-26
Identities = 58/160 (36%), Positives = 100/160 (62%), Gaps = 3/160 (1%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++++GD VGKTCL+ RF +D F+ + +TIG+DF++ E+ G LQ+WDTAGQER
Sbjct: 10 KLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
F+ I + YYRGA I++V+++ + S ++ K W+ + ++E+ S V ++G+K D++
Sbjct: 70 FRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRN-IEEHASSDVERMILGNKCDMNDK 128
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVA 213
Q + + L + +K + S+ + NV E FF +A
Sbjct: 129 RQVSKERGEKLAIDYGIK--FLETSAKSSANVEEAFFTLA 166
>gi|50234889 RAB43 protein [Homo sapiens]
Length = 212
Score = 112 bits (281), Expect = 2e-25
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K+++VGD SVGKTC++ RF F + +TIGVDF M+ E+ G LQ+WDTAGQER
Sbjct: 20 KLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 79
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
F+ I +YYR A I+ +++ +S W+ D +++ S+++ L+G+K DLS
Sbjct: 80 FRTITQSYYRSANGAILAYDITKRSSFLSVPHWIED-VRKYAGSNIVQLLIGNKSDLSEL 138
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVA 213
+ +L E +L ++ S+ NV E F RVA
Sbjct: 139 REVSLAEAQSLAEHYDILCAI-ETSAKDSSNVEEAFLRVA 177
>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
Length = 213
Score = 112 bits (279), Expect = 4e-25
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K +V+G GK+CL+++F ++ F ++ TIGV+F V G LQ+WDTAGQER
Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQER 69
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
F+ + +YYRGA ++V+++ + WL DA P ++++ L G+KKDL
Sbjct: 70 FRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASP-NIVVILCGNKKDLDPE 128
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVA 213
+ +E A + AQE + + S+LTGENV E F + A
Sbjct: 129 REVTFLE--ASRFAQENELMFLETSALTGENVEEAFLKCA 166
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 111 bits (277), Expect = 7e-25
Identities = 59/189 (31%), Positives = 112/189 (59%), Gaps = 4/189 (2%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++++GD VGKTC++ RF +D F+ + +TIG+DF++ E+ G LQ+WDTAGQER
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 69
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
F+ I + YYRGA I++V+++ + S ++ + W+ + ++E+ + V ++G+K D++
Sbjct: 70 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRN-IEEHASADVEKMILGNKCDVNDK 128
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRI 233
Q + ++ ++A + ++ S+ NV FF +A +A + +LE + +
Sbjct: 129 RQ--VSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR-DIKAKMDKKLEGNSPQGS 185
Query: 234 GDVVRINSD 242
V+I D
Sbjct: 186 NQGVKITPD 194
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 109 bits (272), Expect = 3e-24
Identities = 57/160 (35%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++++G+ VGKTCL+ RF + F ATIGVDF ++ E+ G LQ+WDTAGQER
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 70
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
F+ I +YYR A A+I+ +++ S +WL + +++ + V+ LVG+K DL+
Sbjct: 71 FRSITQSYYRSANALILTYDITCEESFRCLPEWLRE-IEQYASNKVITVLVGNKIDLAER 129
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVA 213
+ + + AQ+M Y S+ +NV + F +A
Sbjct: 130 REVSQQRAEEFSEAQDM--YYLETSAKESDNVEKLFLDLA 167
>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 108 bits (271), Expect = 4e-24
Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K +V+G+ GK+CL+++F + F + TIGV+F + V G LQ+WDTAGQER
Sbjct: 15 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 74
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
F+ + +YYRGA ++V+++ + WL DA + ++++ L G+KKDL
Sbjct: 75 FRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDA-RMLASQNIVIILCGNKKDLDAD 133
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVA 213
+ +E A + AQE + + S+LTGENV E F + A
Sbjct: 134 REVTFLE--ASRFAQENELMFLETSALTGENVEEAFVQCA 171
>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
sapiens]
Length = 223
Score = 108 bits (271), Expect = 4e-24
Identities = 64/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTF-DKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQE 112
KV+++GD VGKTC + +F F + AT+G+DF + V G+ LQ+WDTAGQE
Sbjct: 31 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 90
Query: 113 RFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLST 172
RF+ + YYR AQA+++++++ + +S ++ + WL + + E V++ L+G+K D+S
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTE-IHEYAQRDVVIMLLGNKADMS- 148
Query: 173 PAQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARR 232
++ + +D +A+E + S+ TG NV F +A K R
Sbjct: 149 -SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------------KELKYR 194
Query: 233 IGDVVRINSDDSNLYLTASKKKPTCC 258
G S Y+ + KK+ +CC
Sbjct: 195 AGHQADEPSFQIRDYVESQKKRSSCC 220
>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
Length = 200
Score = 108 bits (270), Expect = 5e-24
Identities = 55/160 (34%), Positives = 97/160 (60%), Gaps = 3/160 (1%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++++GD VGKTC++ RF D F+ + +TIG+DF+++ E+ G LQ+WDTAGQER
Sbjct: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
F I ++YYRGA I++V+++ + S E+ +WL + + E+ V L+G+K D+
Sbjct: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRN-IDEHANEDVERMLLGNKCDMDD- 128
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVA 213
+ + + Q+A+E ++ S+ N+ + F +A
Sbjct: 129 -KRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLA 167
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 106 bits (265), Expect = 2e-23
Identities = 56/156 (35%), Positives = 95/156 (60%), Gaps = 3/156 (1%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
KV+++GD VGK+ L++RF ++ F+ K+TIGV+F +V G Q+WDTAGQER
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
++ I S YYRGA ++V+++ + E+ ++WL + L+++ S++++ LVG+K DL
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKE-LRDHADSNIVIMLVGNKSDLR-- 129
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFF 209
A+ +A A++ + S+L NV E F
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
>gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo
sapiens]
Length = 731
Score = 106 bits (264), Expect = 2e-23
Identities = 65/219 (29%), Positives = 113/219 (51%), Gaps = 21/219 (9%)
Query: 40 CQEHRTGTVGFKISKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGI 99
C+E + + ++ K++ VG+ +VGKT + RFC+D F AT+G+D+ ++ V
Sbjct: 533 CKEESSPSAPDRLFKIVFVGNSAVGKTSFLRRFCEDRFSPGMAATVGIDYRVKTLNVDNS 592
Query: 100 PFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSV 159
+LQLWDTAGQER++CI ++R A +I++++L D S ++WL+ +++E V
Sbjct: 593 QVALQLWDTAGQERYRCITQQFFRKADGVIVMYDLTDKQSFLSVRRWLS-SVEEAVGDRV 651
Query: 160 LLFLVGSKKDLSTPAQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEA 219
+ L+G+K L + + Q+A E ++ S+ +G N +E +L A
Sbjct: 652 PVLLLGNK--LDNEKEREVPRGLGEQLATENNLIFYECSAYSGHNTKE------SLLHLA 703
Query: 220 NVLAELEKSGARRIGDVVRINSDDSNLYLTASKKKPTCC 258
L E E D VR + + + KK +CC
Sbjct: 704 RFLKEQE--------DTVR----EDTIQVGHPAKKKSCC 730
>gi|117938299 RAB6C-like [Homo sapiens]
Length = 254
Score = 106 bits (264), Expect = 2e-23
Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 3/161 (1%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K++ +G+ SV KT LI RF D+FD Y+A IG+DF + + L+LWDTAGQER
Sbjct: 15 KLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQER 74
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
+ + Y R + A ++V+++ +V S + T +W+ D E S V++ LVG+K DL+
Sbjct: 75 LRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTEGG-SDVIITLVGNKTDLADK 133
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAA 214
Q ++ E + + A+ + + + G NV++ F RVAA
Sbjct: 134 RQVSIEEGE--RKAKGLNVTFIETRAKAGYNVKQLFRRVAA 172
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 106 bits (264), Expect = 2e-23
Identities = 57/165 (34%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
Query: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 113
K I++GD VGK+CL+ +F F + TIGV+F + G LQ+WDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 114 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 173
F+ I +YYRGA ++V+++ + H WL DA +++ S++++ L+G+K DL +
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDA-RQHSNSNMVIMLIGNKSDLESR 126
Query: 174 AQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFE 218
+ E +A A+E + S+ T NV E F A +E
Sbjct: 127 REVKKEEGEAF--AREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|40255119 RAS and EF-hand domain containing [Homo sapiens]
Length = 740
Score = 106 bits (264), Expect = 2e-23
Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 23/215 (10%)
Query: 51 KISKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAG 110
K K+++ GD +VGK+ + R CK+ F +N AT+GVDF+M+ V G LQLWDTAG
Sbjct: 540 KAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAG 599
Query: 111 QERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDL 170
QERF+ IA +Y+R A +++++++ S + ++W+ D +++ +V + LVG+K D+
Sbjct: 600 QERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWV-DMIEDAAHETVPIMLVGNKADI 658
Query: 171 ----STPAQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELE 226
+T Q + ++A A + S+ G N+ E A L V +
Sbjct: 659 RDTAATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVE-----AVLHLAREVKKRTD 713
Query: 227 KSGARRIGDVVRINSDDSNLYLTASKKKP---TCC 258
K +R I +NL T SKK P CC
Sbjct: 714 KDDSRSI----------TNLTGTNSKKSPQMKNCC 738
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,830,425
Number of Sequences: 37866
Number of extensions: 332067
Number of successful extensions: 1140
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 810
Number of HSP's gapped (non-prelim): 239
length of query: 259
length of database: 18,247,518
effective HSP length: 100
effective length of query: 159
effective length of database: 14,460,918
effective search space: 2299285962
effective search space used: 2299285962
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.