Guide to the Human Genome
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Name: RAB36 Sequence: fasta or formatted (333aa) NCBI GI: 31795535
Description:

RAB36, member RAS oncogene family

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         38           3
 C cysteine            2.7          9           2
 D aspartate           4.2         14           1
 E glutamate           6.3         21           1
 F phenylalanine       3.9         13           2
 G glycine             7.5         25           2
 H histidine           1.5          5           1
 I isoleucine          4.5         15           2
 K lysine              3.9         13           2
 L leucine             8.1         27           2
 M methionine          1.8          6           1
 N asparagine          1.5          5           1
 P proline             4.5         15           2
 Q glutamine           5.7         19           1
 R arginine            7.2         24           2
 S serine              8.4         28           2
 T threonine           5.7         19           2
 V valine              7.5         25           4
 W tryptophan          1.5          5           1
 Y tyrosine            2.1          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB36, member RAS oncogene family 
RAB34                 0.424   Ras-related protein RAB34 isoform 5 
RAB34                 0.424   Ras-related protein RAB34 isoform 1 
RAB34                 0.397   Ras-related protein RAB34 isoform 4 
RAB34                 0.397   Ras-related protein RAB34 isoform 2 
RAB34                 0.332   Ras-related protein RAB34 isoform 3 
LOC100131294          0.158   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.158   PREDICTED: similar to hCG24991 
LOC100131294          0.158   PREDICTED: similar to hCG24991 
RAB13                 0.158   RAB13, member RAS oncogene family 
RAB23                 0.153   Ras-related protein Rab-23 
RAB23                 0.153   Ras-related protein Rab-23 
RAB6A                 0.149   RAB6A, member RAS oncogene family isoform b 
RAB2B                 0.147   RAB2B protein isoform 1 
RAB6A                 0.147   RAB6A, member RAS oncogene family isoform a 
RAB11B                0.144   RAB11B, member RAS oncogene family 
RAB35                 0.142   RAB35, member RAS oncogene family 
RAB6B                 0.142   RAB6B, member RAS oncogene family 
RAB4B                 0.138   ras-related GTP-binding protein 4b 
RAB1B                 0.138   RAB1B, member RAS oncogene family 
RAB14                 0.135   GTPase Rab14 
RAB1A                 0.135   RAB1A, member RAS oncogene family isoform 1 
RAB2A                 0.135   RAB2A, member RAS oncogene family 
RAB30                 0.133   RAB30, member RAS oncogene family 
RAB11A                0.131   Ras-related protein Rab-11A 
RAB4A                 0.130   RAB4A, member RAS oncogene family 
EFCAB4B               0.128   EF-hand calcium binding domain 4B isoform a 
RAB37                 0.128   RAB37, member RAS oncogene family isoform 3 
RAB8B                 0.128   RAB8B, member RAS oncogene family 
RAB8A                 0.127   mel transforming oncogene 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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