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Search of human proteins with 222136644
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222136644 RAD21-like 1 [Homo sapiens]
(556 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222136644 RAD21-like 1 [Homo sapiens] 1103 0.0
gi|5453994 RAD21 homolog [Homo sapiens] 421 e-117
gi|115430231 REC8 homolog [Homo sapiens] 49 2e-05
gi|115430229 REC8 homolog [Homo sapiens] 49 2e-05
gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo s... 40 0.007
gi|14670350 general transcription factor II, i isoform 1 [Homo s... 33 0.69
gi|110735439 Werner syndrome protein [Homo sapiens] 33 0.90
gi|169218196 PREDICTED: similar to Werner syndrome ATP-dependent... 33 0.90
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 33 0.90
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 33 0.90
gi|217330574 EH domain binding protein 1 isoform 3 [Homo sapiens] 32 1.5
gi|217330572 EH domain binding protein 1 isoform 3 [Homo sapiens] 32 1.5
gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens] 32 1.5
gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens] 32 1.5
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 32 1.5
gi|121114306 neurogenic differentiation 1 [Homo sapiens] 31 2.6
gi|224451082 cytospin A [Homo sapiens] 30 4.4
gi|224451080 cytospin A [Homo sapiens] 30 4.4
gi|239752748 PREDICTED: similar to forkhead box O6 [Homo sapiens] 30 4.4
gi|14670354 general transcription factor II, i isoform 3 [Homo s... 30 4.4
gi|41349446 stromal interaction molecule 2 [Homo sapiens] 30 4.4
gi|33946313 ninein isoform 4 [Homo sapiens] 30 4.4
gi|33946321 ninein isoform 5 [Homo sapiens] 30 4.4
gi|148536871 ninein isoform 1 [Homo sapiens] 30 4.4
gi|148536869 ninein isoform 2 [Homo sapiens] 30 4.4
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi... 30 4.4
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 30 5.8
gi|56550043 sarcolemma associated protein [Homo sapiens] 30 5.8
gi|221219020 NYD-SP11 protein [Homo sapiens] 30 7.6
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 30 7.6
>gi|222136644 RAD21-like 1 [Homo sapiens]
Length = 556
Score = 1103 bits (2852), Expect = 0.0
Identities = 556/556 (100%), Positives = 556/556 (100%)
Query: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSPKVKIALRTSGHLL 60
MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSPKVKIALRTSGHLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSPKVKIALRTSGHLL 60
Query: 61 LGVVRIYNRKAKYLLADCSEAFLKMKMTFCPGLVDLPKENFEASYNAITLPEEFHDFDTQ 120
LGVVRIYNRKAKYLLADCSEAFLKMKMTFCPGLVDLPKENFEASYNAITLPEEFHDFDTQ
Sbjct: 61 LGVVRIYNRKAKYLLADCSEAFLKMKMTFCPGLVDLPKENFEASYNAITLPEEFHDFDTQ 120
Query: 121 NMNAIDVSEHFTQNQSRPEEITLRENFDNDLIFQAESFGEESEILRRHSFFDDNILLNSS 180
NMNAIDVSEHFTQNQSRPEEITLRENFDNDLIFQAESFGEESEILRRHSFFDDNILLNSS
Sbjct: 121 NMNAIDVSEHFTQNQSRPEEITLRENFDNDLIFQAESFGEESEILRRHSFFDDNILLNSS 180
Query: 181 GPLIEHSSGSLTGERSLFYDSGDGFGDEGAAGEMIDNLLQDDQNILLEDMHLNREISLPS 240
GPLIEHSSGSLTGERSLFYDSGDGFGDEGAAGEMIDNLLQDDQNILLEDMHLNREISLPS
Sbjct: 181 GPLIEHSSGSLTGERSLFYDSGDGFGDEGAAGEMIDNLLQDDQNILLEDMHLNREISLPS 240
Query: 241 EPPNSLAVEPDNSECICVPENEKMNETILLSTEEEGFTLDPIDISDIAEKRKGKKRRLLI 300
EPPNSLAVEPDNSECICVPENEKMNETILLSTEEEGFTLDPIDISDIAEKRKGKKRRLLI
Sbjct: 241 EPPNSLAVEPDNSECICVPENEKMNETILLSTEEEGFTLDPIDISDIAEKRKGKKRRLLI 300
Query: 301 DPIKELSSKVIHKQLTSFADTLMVLELAPPTQRLMMWKKRGGVHTLLSTAAQDLIHAELK 360
DPIKELSSKVIHKQLTSFADTLMVLELAPPTQRLMMWKKRGGVHTLLSTAAQDLIHAELK
Sbjct: 301 DPIKELSSKVIHKQLTSFADTLMVLELAPPTQRLMMWKKRGGVHTLLSTAAQDLIHAELK 360
Query: 361 MLFTKCFLSSGFKLGRKMIQKESVREEVGNQNIVETSMMQEPNYQQELSKPQTWKDVIGG 420
MLFTKCFLSSGFKLGRKMIQKESVREEVGNQNIVETSMMQEPNYQQELSKPQTWKDVIGG
Sbjct: 361 MLFTKCFLSSGFKLGRKMIQKESVREEVGNQNIVETSMMQEPNYQQELSKPQTWKDVIGG 420
Query: 421 SQHSSHEDTNKNINSEQDIVEMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIETE 480
SQHSSHEDTNKNINSEQDIVEMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIETE
Sbjct: 421 SQHSSHEDTNKNINSEQDIVEMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIETE 480
Query: 481 RWNGRILQMLNRLRESNKMGMQSFSLMKLCRNSDRKQAAAKFYSFLVLKKQLAIELSQSA 540
RWNGRILQMLNRLRESNKMGMQSFSLMKLCRNSDRKQAAAKFYSFLVLKKQLAIELSQSA
Sbjct: 481 RWNGRILQMLNRLRESNKMGMQSFSLMKLCRNSDRKQAAAKFYSFLVLKKQLAIELSQSA 540
Query: 541 PYADIIATMGPMFYNI 556
PYADIIATMGPMFYNI
Sbjct: 541 PYADIIATMGPMFYNI 556
>gi|5453994 RAD21 homolog [Homo sapiens]
Length = 631
Score = 421 bits (1081), Expect = e-117
Identities = 271/633 (42%), Positives = 374/633 (59%), Gaps = 79/633 (12%)
Query: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSPKVKIALRTSGHLL 60
MFY H ++SKRGPLAKIWLAAHW+KKLTKAHVFECNLE ++E I+SPKVK+ALRTSGHLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYNRKAKYLLADCSEAFLKMKMTFCPGLVDLPKENFEASYNAITLPEEFHDFD-- 118
LGVVRIY+RKAKYLLADC+EAF+K+KM F PG+VDLP+EN EA+YNAITLPEEFHDFD
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 119 TQNMNAIDVSEHFTQNQSRPEEITLRENFDNDLIFQAESFG----EESEILRRHSFFDDN 174
+++ IDV++ F+ NQSR EEIT+RE N I Q FG ++ EI+R S F+D+
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDREIMREGSAFEDD 180
Query: 175 ILL---NSSGPLI--EHSSGSLTGE-RSLFYD---SGDGFGDEGAAGEMIDNLLQDDQNI 225
+L +S L+ E S+ +L + L Y+ D FG+ G + D L+ ++
Sbjct: 181 DMLVSTTTSNLLLESEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDGG 240
Query: 226 LLEDMHLNRE--ISLPSEPPNSLAVEPDN----------SECICVPENEKMNETILLSTE 273
+ +D E + LP +P + E DN S P ++T L+ E
Sbjct: 241 IFDDPPALSEAGVMLPEQPAHDDMDEDDNVSMGGPDSPDSVDPVEPMPTMTDQTTLVPNE 300
Query: 274 EEGFTLDPIDISDIAEKRKGKKRRLLIDPIKELSSKVIHKQLTSFADTLMVLELAPPTQR 333
EE F L+PIDI+ + E + +KR+L++D +KEL SK I QL+ ++D + L+LAPPT++
Sbjct: 301 EEAFALEPIDIT-VKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK 359
Query: 334 LMMWKKRGGVHTLLSTAAQDLIHAELKMLFTKC---FLSSGFKLGRK------------- 377
LMMWK+ GGV L S AQ L + L LFT+C + + RK
Sbjct: 360 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE 419
Query: 378 ----MIQKESVREEVGNQNIVETSMMQEPNYQQE--LSKPQTWKDVIG-------GSQHS 424
+ +E +++ +++++ +++EP+ QE + +T D G +
Sbjct: 420 FENPEVPREDQQQQHQQRDVIDEPIIEEPSRLQESVMEASRTNIDESAMPPPPPQGVKRK 479
Query: 425 SHEDTNKNINSEQDIVEM----VSLAAEESSLMNDLFAQEIEYSP-----VELESLSNEE 475
+ + + + Q + +M V L EE + L E+E P E E +EE
Sbjct: 480 AGQIDPEPVMPPQQVEQMEIPPVELPPEEPPNICQLI-PELELLPEKEKEKEKEKEDDEE 538
Query: 476 -----------NIETERWNGRILQMLNRL-RESNKMGMQSFSLMKLCRNSDRKQAAAKFY 523
+ E RWN R QML+ L R K G +S SL++LCRN++RKQAAAKFY
Sbjct: 539 EEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAAKFY 598
Query: 524 SFLVLKKQLAIELSQSAPYADIIATMGPMFYNI 556
SFLVLKKQ AIEL+Q PY+DIIAT GP F+ I
Sbjct: 599 SFLVLKKQQAIELTQEEPYSDIIATPGPRFHII 631
>gi|115430231 REC8 homolog [Homo sapiens]
Length = 547
Score = 48.5 bits (114), Expect = 2e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 2 FYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILS-------------PK 48
+Y +VL G A IWLAA +L K N+ T E+IL+ P+
Sbjct: 3 YYPNVLQRHTGCFATIWLAATRGSRLVKREYLRVNVVKTCEEILNYVLVRVQPPQPGLPR 62
Query: 49 VKIALRTSGHLLLGVVRIYNRKAKYLLAD 77
+ +L S L +GV+R+Y+++ +YL+ D
Sbjct: 63 PRFSLYLSAQLQIGVIRVYSQQCQYLVED 91
Score = 36.2 bits (82), Expect = 0.081
Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 20/267 (7%)
Query: 291 RKGKKRRLLI-DPIKELSSKVIHKQLTSFADTLMVLELAPPTQRLMMWKKRGGVHTLLST 349
R+ ++RRLL D ++S + +QL + A + PP + + RG +
Sbjct: 298 RRRRRRRLLFWDKETQISPEKFQEQLQTRAHCWECPMVQPPERTI-----RGPAELFRTP 352
Query: 350 AAQDLIHAELKMLFTKCFLSSGFKLGRKMIQKESVREEVGNQNIVETSMMQEPNYQQELS 409
+ EL L+T C L R++ ++ + EE + I S ++ P E S
Sbjct: 353 TLSGWLPPELLGLWTHCAQPPPKALRRELPEEAAAEEE--RRKIEVPSEIEVPREALEPS 410
Query: 410 KPQTWKDVIGGSQHSSHEDTNKNINSEQDIVEMVSLAAEESSLMNDLFAQEIEYSPVELE 469
P I + + E + ++ ++ + A E+ + E+ P+E+
Sbjct: 411 VPLMVSLEIS-LEAAEEEKSRISLIPPEERWAWPEVEAPEAPALP--VVPELPEVPMEMP 467
Query: 470 SL--SNEENIETERWNGRILQMLNRLRESNKMGMQSFSLMKLCRNSDRKQAAAKFYSFLV 527
+ E + E + + L RE + + S S R+ AA FY LV
Sbjct: 468 LVLPPELELLSLEAVHRAVALELQANREPDFSSLVS-------PLSPRRMAARVFYLLLV 520
Query: 528 LKKQLAIELSQSAPYADIIATMGPMFY 554
L Q + + Q PY ++ GP F+
Sbjct: 521 LSAQQILHVKQEKPYGRLLIQPGPRFH 547
>gi|115430229 REC8 homolog [Homo sapiens]
Length = 547
Score = 48.5 bits (114), Expect = 2e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 2 FYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILS-------------PK 48
+Y +VL G A IWLAA +L K N+ T E+IL+ P+
Sbjct: 3 YYPNVLQRHTGCFATIWLAATRGSRLVKREYLRVNVVKTCEEILNYVLVRVQPPQPGLPR 62
Query: 49 VKIALRTSGHLLLGVVRIYNRKAKYLLAD 77
+ +L S L +GV+R+Y+++ +YL+ D
Sbjct: 63 PRFSLYLSAQLQIGVIRVYSQQCQYLVED 91
Score = 36.2 bits (82), Expect = 0.081
Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 20/267 (7%)
Query: 291 RKGKKRRLLI-DPIKELSSKVIHKQLTSFADTLMVLELAPPTQRLMMWKKRGGVHTLLST 349
R+ ++RRLL D ++S + +QL + A + PP + + RG +
Sbjct: 298 RRRRRRRLLFWDKETQISPEKFQEQLQTRAHCWECPMVQPPERTI-----RGPAELFRTP 352
Query: 350 AAQDLIHAELKMLFTKCFLSSGFKLGRKMIQKESVREEVGNQNIVETSMMQEPNYQQELS 409
+ EL L+T C L R++ ++ + EE + I S ++ P E S
Sbjct: 353 TLSGWLPPELLGLWTHCAQPPPKALRRELPEEAAAEEE--RRKIEVPSEIEVPREALEPS 410
Query: 410 KPQTWKDVIGGSQHSSHEDTNKNINSEQDIVEMVSLAAEESSLMNDLFAQEIEYSPVELE 469
P I + + E + ++ ++ + A E+ + E+ P+E+
Sbjct: 411 VPLMVSLEIS-LEAAEEEKSRISLIPPEERWAWPEVEAPEAPALP--VVPELPEVPMEMP 467
Query: 470 SL--SNEENIETERWNGRILQMLNRLRESNKMGMQSFSLMKLCRNSDRKQAAAKFYSFLV 527
+ E + E + + L RE + + S S R+ AA FY LV
Sbjct: 468 LVLPPELELLSLEAVHRAVALELQANREPDFSSLVS-------PLSPRRMAARVFYLLLV 520
Query: 528 LKKQLAIELSQSAPYADIIATMGPMFY 554
L Q + + Q PY ++ GP F+
Sbjct: 521 LSAQQILHVKQEKPYGRLLIQPGPRFH 547
>gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo
sapiens]
Length = 551
Score = 39.7 bits (91), Expect = 0.007
Identities = 65/300 (21%), Positives = 113/300 (37%), Gaps = 54/300 (18%)
Query: 221 DDQNILLEDMHLNRE----ISLPSEPPNSLAVEPDNSECICVPENEKMNETILLSTEEEG 276
D +LL D H ++ + L +P + D + VP + E++++S EE
Sbjct: 51 DSPIVLLRDKHTLQKTLTALGLDRKPETIQLITRDMVRELIVPTEDPSGESLIISPEE-- 108
Query: 277 FTLDPIDISDIAEKRKGKKRRLLIDPIKELSSKVIHKQLTSFADTLMVLELAPPTQRLMM 336
E+ K L + + E + K+ + D +M + Q+ M+
Sbjct: 109 -----------FERIKWASHVLTREEL-EARDQAFKKEKEATMDAVMTRKKIMK-QKEMV 155
Query: 337 W---KKRGGVHTLLSTAAQDLIHA----------ELK-----MLFTKCF-LSSGFKLGRK 377
W KK + + AQ+L+ ELK +L KC + L ++
Sbjct: 156 WNNNKKLSDLEEVAKERAQNLLQRANKLRMEQEEELKDMSKIILNAKCHAIRDAQILEKQ 215
Query: 378 MIQKESVREEVGNQNIVETSMMQEPNYQQELSKPQTWKDVIGGSQHSSHEDTNKNINSEQ 437
IQKE EE ++E + Q+EL + + + I +
Sbjct: 216 QIQKELDTEEKRLDQMMEVERQKSIQRQEELERKR----------------REERIRGRR 259
Query: 438 DIVEMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIETERWNGRILQMLNRLRESN 497
IVE + EE SL+ + QE E +E L E+ + ER + L+M ++ N
Sbjct: 260 QIVEQMEKNQEERSLLAEQREQEKEQMLEYMEQLQEEDLKDMERRQQQKLKMQAEIKRIN 319
>gi|14670350 general transcription factor II, i isoform 1 [Homo
sapiens]
Length = 998
Score = 33.1 bits (74), Expect = 0.69
Identities = 26/132 (19%), Positives = 55/132 (41%), Gaps = 21/132 (15%)
Query: 383 SVREEVGNQNIVETSMMQEPNYQQELSKPQTWKDVIGGSQHSS--HEDTNKNINSEQDIV 440
+V+EE + + + ++ P+ ++ + Q + GS HSS +E T + +E
Sbjct: 238 TVKEESEDPDYYQYNIQAGPSETDDVDEKQPLSKPLQGSHHSSEGNEGTEMEVPAEDSTQ 297
Query: 441 EMVSLAAEESSLMNDLFAQEIEYSPVELESLSNE-----------------ENIETERWN 483
+ S +E+ + ++ ++ +YSP +NE E+WN
Sbjct: 298 HVPSETSEDPEV--EVTIEDDDYSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWN 355
Query: 484 GRILQMLNRLRE 495
RI + ++ E
Sbjct: 356 ARITDLRKQVEE 367
>gi|110735439 Werner syndrome protein [Homo sapiens]
Length = 1432
Score = 32.7 bits (73), Expect = 0.90
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 19/143 (13%)
Query: 139 EEITLRENFDNDLIFQAESFGEESEILRRHSFFDDNILLNSSGPLIEH-SSGSLTGERSL 197
E+ L+EN + + + E +IL + S + L + + EH S + S
Sbjct: 379 EDNKLKENMERACLMSLDITEHELQILEQQS--QEEYLSDIAYKSTEHLSPNDNENDTSY 436
Query: 198 FYDSGDGFGDEGAAGEMIDNLLQDDQN-----ILLEDMHLNREISLPSEPPNSLAVEPDN 252
+S DE EM+ +L +D ++ D L E+ E NS VEP +
Sbjct: 437 VIES-----DEDLEMEMLKHLSPNDNENDTSYVIESDEDLEMEMLKSLENLNSGTVEPTH 491
Query: 253 SECICVPENEKMNETILLSTEEE 275
S+C+ KM + L T+EE
Sbjct: 492 SKCL------KMERNLGLPTKEE 508
>gi|169218196 PREDICTED: similar to Werner syndrome ATP-dependent
helicase, partial [Homo sapiens]
Length = 1140
Score = 32.7 bits (73), Expect = 0.90
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 19/143 (13%)
Query: 139 EEITLRENFDNDLIFQAESFGEESEILRRHSFFDDNILLNSSGPLIEH-SSGSLTGERSL 197
E+ L+EN + + + E +IL + S + L + + EH S + S
Sbjct: 87 EDNKLKENMERACLMSLDITEHELQILEQQS--QEEYLSDIAYKSTEHLSPNDNENDTSY 144
Query: 198 FYDSGDGFGDEGAAGEMIDNLLQDDQN-----ILLEDMHLNREISLPSEPPNSLAVEPDN 252
+S DE EM+ +L +D ++ D L E+ E NS VEP +
Sbjct: 145 VIES-----DEDLEMEMLKHLSPNDNENDTSYVIESDEDLEMEMLKSLENLNSGTVEPTH 199
Query: 253 SECICVPENEKMNETILLSTEEE 275
S+C+ KM + L T+EE
Sbjct: 200 SKCL------KMERNLGLPTKEE 216
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 32.7 bits (73), Expect = 0.90
Identities = 62/296 (20%), Positives = 122/296 (41%), Gaps = 42/296 (14%)
Query: 212 GEMIDNLLQDDQNILLEDMHLNREISLPSEPPNSLAVEPDNSECI-----CVPENEKMNE 266
GE+ + ++Q +Q I ++M L E NS E +SE I V E +K N
Sbjct: 360 GELQEQIVQKNQEI--KNMKL--------ELTNSKQKERQSSEEIKQLMGTVEELQKRNH 409
Query: 267 TILLSTEEEGFTLDPIDISDIAEKRKGKKRRLLIDPIKELSSKVIHKQLTSFADTLMVLE 326
++ F D + + +RK ++ R +D ++ +Q+ L+
Sbjct: 410 ------KDSQFETDIVQRMEQETQRKLEQLRAELD-------EMYGQQIVQMKQELIRQH 456
Query: 327 LAPPTQRLMMWKKRGGVHTLLSTAAQDLIHAELKMLFTKCFLSSGFKLGRKMIQKESVRE 386
+A + M + +G + L + + ++ + L KL QKE ++E
Sbjct: 457 MAQMEE--MKTRHKGEMENALRSYSNITVNEDQIKLMNVAINELNIKLQDTNSQKEKLKE 514
Query: 387 EVGN--------QNIVETSMMQEPNYQQELSKPQTWKDVIGGSQHSSHEDTNKNINSEQD 438
E+G Q +E +++E ++ +E + Q + I Q S + +K++++ +D
Sbjct: 515 ELGLILEEKCALQRQLE-DLVEELSFSRE--QIQRARQTIA-EQESKLNEAHKSLSTVED 570
Query: 439 IVEMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIETERWNGRILQMLNRLR 494
+ + A+E + E+ ++LE L E+N +R L RLR
Sbjct: 571 LKAEIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRMAESQEAELERLR 626
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 32.7 bits (73), Expect = 0.90
Identities = 62/296 (20%), Positives = 122/296 (41%), Gaps = 42/296 (14%)
Query: 212 GEMIDNLLQDDQNILLEDMHLNREISLPSEPPNSLAVEPDNSECI-----CVPENEKMNE 266
GE+ + ++Q +Q I ++M L E NS E +SE I V E +K N
Sbjct: 360 GELQEQIVQKNQEI--KNMKL--------ELTNSKQKERQSSEEIKQLMGTVEELQKRNH 409
Query: 267 TILLSTEEEGFTLDPIDISDIAEKRKGKKRRLLIDPIKELSSKVIHKQLTSFADTLMVLE 326
++ F D + + +RK ++ R +D ++ +Q+ L+
Sbjct: 410 ------KDSQFETDIVQRMEQETQRKLEQLRAELD-------EMYGQQIVQMKQELIRQH 456
Query: 327 LAPPTQRLMMWKKRGGVHTLLSTAAQDLIHAELKMLFTKCFLSSGFKLGRKMIQKESVRE 386
+A + M + +G + L + + ++ + L KL QKE ++E
Sbjct: 457 MAQMEE--MKTRHKGEMENALRSYSNITVNEDQIKLMNVAINELNIKLQDTNSQKEKLKE 514
Query: 387 EVGN--------QNIVETSMMQEPNYQQELSKPQTWKDVIGGSQHSSHEDTNKNINSEQD 438
E+G Q +E +++E ++ +E + Q + I Q S + +K++++ +D
Sbjct: 515 ELGLILEEKCALQRQLE-DLVEELSFSRE--QIQRARQTIA-EQESKLNEAHKSLSTVED 570
Query: 439 IVEMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIETERWNGRILQMLNRLR 494
+ + A+E + E+ ++LE L E+N +R L RLR
Sbjct: 571 LKAEIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRMAESQEAELERLR 626
>gi|217330574 EH domain binding protein 1 isoform 3 [Homo sapiens]
Length = 1160
Score = 32.0 bits (71), Expect = 1.5
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 15/113 (13%)
Query: 422 QHSSHEDTNKNINSEQDIVEMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIETER 481
Q S EDT K N E+ + E ++N F +Y EL +L NE+ ++
Sbjct: 962 QRSIQEDTKKG-NEEKAAITETQRKPSEDEVLNKGFKDTSQYVVGELAALENEQ----KQ 1016
Query: 482 WNGRILQMLNRLRESNKMGMQSFSLMKLCRNSDRKQAAAKFYSFLVLKKQLAI 534
+ R + RLR LM RN++ ++A + + LV KK I
Sbjct: 1017 IDTRAALVEKRLR----------YLMDTGRNTEEEEAMMQEWFMLVNKKNALI 1059
>gi|217330572 EH domain binding protein 1 isoform 3 [Homo sapiens]
Length = 1160
Score = 32.0 bits (71), Expect = 1.5
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 15/113 (13%)
Query: 422 QHSSHEDTNKNINSEQDIVEMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIETER 481
Q S EDT K N E+ + E ++N F +Y EL +L NE+ ++
Sbjct: 962 QRSIQEDTKKG-NEEKAAITETQRKPSEDEVLNKGFKDTSQYVVGELAALENEQ----KQ 1016
Query: 482 WNGRILQMLNRLRESNKMGMQSFSLMKLCRNSDRKQAAAKFYSFLVLKKQLAI 534
+ R + RLR LM RN++ ++A + + LV KK I
Sbjct: 1017 IDTRAALVEKRLR----------YLMDTGRNTEEEEAMMQEWFMLVNKKNALI 1059
>gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens]
Length = 1196
Score = 32.0 bits (71), Expect = 1.5
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 15/113 (13%)
Query: 422 QHSSHEDTNKNINSEQDIVEMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIETER 481
Q S EDT K N E+ + E ++N F +Y EL +L NE+ ++
Sbjct: 998 QRSIQEDTKKG-NEEKAAITETQRKPSEDEVLNKGFKDTSQYVVGELAALENEQ----KQ 1052
Query: 482 WNGRILQMLNRLRESNKMGMQSFSLMKLCRNSDRKQAAAKFYSFLVLKKQLAI 534
+ R + RLR LM RN++ ++A + + LV KK I
Sbjct: 1053 IDTRAALVEKRLR----------YLMDTGRNTEEEEAMMQEWFMLVNKKNALI 1095
>gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens]
Length = 1231
Score = 32.0 bits (71), Expect = 1.5
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 15/113 (13%)
Query: 422 QHSSHEDTNKNINSEQDIVEMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIETER 481
Q S EDT K N E+ + E ++N F +Y EL +L NE+ ++
Sbjct: 1033 QRSIQEDTKKG-NEEKAAITETQRKPSEDEVLNKGFKDTSQYVVGELAALENEQ----KQ 1087
Query: 482 WNGRILQMLNRLRESNKMGMQSFSLMKLCRNSDRKQAAAKFYSFLVLKKQLAI 534
+ R + RLR LM RN++ ++A + + LV KK I
Sbjct: 1088 IDTRAALVEKRLR----------YLMDTGRNTEEEEAMMQEWFMLVNKKNALI 1130
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 32.0 bits (71), Expect = 1.5
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 7/140 (5%)
Query: 380 QKESVREEVGNQNIVETSMMQEPNYQQELSKPQTWKDVIGGSQHSSHEDTNKNINSEQDI 439
Q E + EE ++ ET +M N Q +P+ ++ GS SH + + + E+
Sbjct: 207 QVEVMVEEKTTESQEETVVMSLKNGQISSEEPKQEEEREQGSDEISHHEKMEEEDKERAE 266
Query: 440 VEMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIETERWNGRILQMLNRLRESNKM 499
E L AEE + A++ + E + EE + R + R+RE K
Sbjct: 267 AERARLEAEERERIK---AEQDKKIADERARIEAEEKAAAQERERREAEERERMREEEKR 323
Query: 500 GMQSFSLMKLCRNSDRKQAA 519
+ +K + K+AA
Sbjct: 324 AAEERQRIK----EEEKRAA 339
>gi|121114306 neurogenic differentiation 1 [Homo sapiens]
Length = 356
Score = 31.2 bits (69), Expect = 2.6
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 395 ETSMMQEPNYQQELSKPQTWKDVIGGSQHSSHEDTNKNINSEQDIVEMVSLAAEESSLMN 454
E+ +M EP Q P +W D SQ HE K + E ++ AEE SL N
Sbjct: 7 ESGLMGEPQPQG----PPSWTDECLSSQDEEHEADKKEDDLE-------AMNAEEDSLRN 55
Query: 455 DLFAQEIEYSPVELESLSNEENIETERWNGRILQMLNRLRESNKMGMQSFSLMKLCRNS 513
++ E E L EE E E + + + + ++ K ++ F L ++ N+
Sbjct: 56 GGEEED------EDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANA 108
>gi|224451082 cytospin A [Homo sapiens]
Length = 1117
Score = 30.4 bits (67), Expect = 4.4
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 110 LPEEFHDFDTQNMNAIDVSEHFTQNQSRPEEITLRENFDNDLIFQAESFGEESEILRR-- 167
L E D Q + ++E ++ + E+ T+ + D+ E++ +R
Sbjct: 202 LRNELRDMRAQ----LGINEDHSEGDEKSEKETIMAHQPTDVESTLLQLQEQNTAIREEL 257
Query: 168 HSFFDDNILL----NSSGPLIEH---SSGSLTGERSLFYD-----SGDGFGD-----EGA 210
+ ++N +L N+ G +E +S L G +SL + DG G EG+
Sbjct: 258 NQLKNENRMLKDRLNALGFSLEQRLDNSEKLFGYQSLSPEITPDNQSDGGGTLTSSVEGS 317
Query: 211 AGEMIDNLLQDDQNILLEDMHLNREISLPSE 241
A +++LL D+N L++ H N +L SE
Sbjct: 318 APGSVEDLLSQDENTLMDHQHSNSMDNLDSE 348
>gi|224451080 cytospin A [Homo sapiens]
Length = 1117
Score = 30.4 bits (67), Expect = 4.4
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 110 LPEEFHDFDTQNMNAIDVSEHFTQNQSRPEEITLRENFDNDLIFQAESFGEESEILRR-- 167
L E D Q + ++E ++ + E+ T+ + D+ E++ +R
Sbjct: 202 LRNELRDMRAQ----LGINEDHSEGDEKSEKETIMAHQPTDVESTLLQLQEQNTAIREEL 257
Query: 168 HSFFDDNILL----NSSGPLIEH---SSGSLTGERSLFYD-----SGDGFGD-----EGA 210
+ ++N +L N+ G +E +S L G +SL + DG G EG+
Sbjct: 258 NQLKNENRMLKDRLNALGFSLEQRLDNSEKLFGYQSLSPEITPDNQSDGGGTLTSSVEGS 317
Query: 211 AGEMIDNLLQDDQNILLEDMHLNREISLPSE 241
A +++LL D+N L++ H N +L SE
Sbjct: 318 APGSVEDLLSQDENTLMDHQHSNSMDNLDSE 348
>gi|239752748 PREDICTED: similar to forkhead box O6 [Homo sapiens]
Length = 562
Score = 30.4 bits (67), Expect = 4.4
Identities = 24/87 (27%), Positives = 32/87 (36%), Gaps = 10/87 (11%)
Query: 176 LLNSSGPLIEHSSGSLTGERSLFYDSGDGFGDEGAAGEMIDNLLQDDQNILLED------ 229
L GPL H G L + D +G AG L D ++I+L D
Sbjct: 478 LAELGGPLGLHGGGGAGLPEGLLDGAQDAYGPRARAG----TLECDVESIILNDFMDSDE 533
Query: 230 MHLNREISLPSEPPNSLAVEPDNSECI 256
M N + +LP PP P N +
Sbjct: 534 MDFNFDSALPPPPPGLAGAPPPNQSWV 560
>gi|14670354 general transcription factor II, i isoform 3 [Homo
sapiens]
Length = 977
Score = 30.4 bits (67), Expect = 4.4
Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 14/118 (11%)
Query: 383 SVREEVGNQNIVETSMMQEPNYQQELSKPQTWKDVIGGSQHSS--HEDTNKNINSEQDIV 440
+V+EE + + + ++ P+ ++ + Q + GS HSS +E T + +E D
Sbjct: 238 TVKEESEDPDYYQYNIQAGPSETDDVDEKQPLSKPLQGSHHSSEGNEGTEMEVPAEDDDY 297
Query: 441 EMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIET---ERWNGRILQMLNRLRE 495
S + A E+ PV + + + + E+WN RI + ++ E
Sbjct: 298 SPPSKRPK---------ANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEE 346
>gi|41349446 stromal interaction molecule 2 [Homo sapiens]
Length = 833
Score = 30.4 bits (67), Expect = 4.4
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 237 SLPSEPPNSLAVEPDNSECICVPENEKMNETILLSTEEEGFTLDPIDISDIAEKRKGKKR 296
SLPS P+ L+V S C + NE+ E I S E++ D D G+K+
Sbjct: 640 SLPSPDPDILSV----SSCPALYRNEEEEEAIYFSAEKQWEVPDTASECDSLNSSIGRKQ 695
Query: 297 R--LLIDPIKELSSKVIHKQLTSFADT 321
L ++ + LS + I + S D+
Sbjct: 696 SPPLSLEIYQTLSPRKISRDEVSLEDS 722
>gi|33946313 ninein isoform 4 [Homo sapiens]
Length = 2096
Score = 30.4 bits (67), Expect = 4.4
Identities = 44/197 (22%), Positives = 70/197 (35%), Gaps = 24/197 (12%)
Query: 338 KKRGGVHTLLSTAAQDLIHAELKMLFTKCFLSSGFKLGRKMIQKESVREEVGNQNIVETS 397
++ G V L A + + +KM L + + S +E + T+
Sbjct: 1067 EENGDVLLSLQRAHEQAVKENVKMATEISRLQQRLQKLEPGLVMSSCLDEPATEFFGNTA 1126
Query: 398 MMQEPNYQQELSKPQTWKDVIGGSQHSSHEDTNKNINSEQDIVEMVSLAAEESSLMNDLF 457
EP QQ +K V G ++ D E D V + S ++
Sbjct: 1127 EQTEPFLQQNRTK-----QVEGVTRRHVLSDL------EDDEVRDLGSTGTSSVQRQEVK 1175
Query: 458 AQEIEYSPVELESLSNEENIETERWNGRILQMLNRLRESNKMGMQSFSLMKLCRNSDRKQ 517
+E E S L N E TE W + +++L+E LM LC + DR
Sbjct: 1176 IEESEASVEGFSELENSEETRTESW--ELKNQISQLQE---------QLMMLCADCDRAS 1224
Query: 518 AAAK--FYSFLVLKKQL 532
+ + VLKK+L
Sbjct: 1225 EKKQDLLFDVSVLKKKL 1241
>gi|33946321 ninein isoform 5 [Homo sapiens]
Length = 2090
Score = 30.4 bits (67), Expect = 4.4
Identities = 44/197 (22%), Positives = 70/197 (35%), Gaps = 24/197 (12%)
Query: 338 KKRGGVHTLLSTAAQDLIHAELKMLFTKCFLSSGFKLGRKMIQKESVREEVGNQNIVETS 397
++ G V L A + + +KM L + + S +E + T+
Sbjct: 1061 EENGDVLLSLQRAHEQAVKENVKMATEISRLQQRLQKLEPGLVMSSCLDEPATEFFGNTA 1120
Query: 398 MMQEPNYQQELSKPQTWKDVIGGSQHSSHEDTNKNINSEQDIVEMVSLAAEESSLMNDLF 457
EP QQ +K V G ++ D E D V + S ++
Sbjct: 1121 EQTEPFLQQNRTK-----QVEGVTRRHVLSDL------EDDEVRDLGSTGTSSVQRQEVK 1169
Query: 458 AQEIEYSPVELESLSNEENIETERWNGRILQMLNRLRESNKMGMQSFSLMKLCRNSDRKQ 517
+E E S L N E TE W + +++L+E LM LC + DR
Sbjct: 1170 IEESEASVEGFSELENSEETRTESW--ELKNQISQLQE---------QLMMLCADCDRAS 1218
Query: 518 AAAK--FYSFLVLKKQL 532
+ + VLKK+L
Sbjct: 1219 EKKQDLLFDVSVLKKKL 1235
>gi|148536871 ninein isoform 1 [Homo sapiens]
Length = 2046
Score = 30.4 bits (67), Expect = 4.4
Identities = 44/197 (22%), Positives = 70/197 (35%), Gaps = 24/197 (12%)
Query: 338 KKRGGVHTLLSTAAQDLIHAELKMLFTKCFLSSGFKLGRKMIQKESVREEVGNQNIVETS 397
++ G V L A + + +KM L + + S +E + T+
Sbjct: 1061 EENGDVLLSLQRAHEQAVKENVKMATEISRLQQRLQKLEPGLVMSSCLDEPATEFFGNTA 1120
Query: 398 MMQEPNYQQELSKPQTWKDVIGGSQHSSHEDTNKNINSEQDIVEMVSLAAEESSLMNDLF 457
EP QQ +K V G ++ D E D V + S ++
Sbjct: 1121 EQTEPFLQQNRTK-----QVEGVTRRHVLSDL------EDDEVRDLGSTGTSSVQRQEVK 1169
Query: 458 AQEIEYSPVELESLSNEENIETERWNGRILQMLNRLRESNKMGMQSFSLMKLCRNSDRKQ 517
+E E S L N E TE W + +++L+E LM LC + DR
Sbjct: 1170 IEESEASVEGFSELENSEETRTESW--ELKNQISQLQE---------QLMMLCADCDRAS 1218
Query: 518 AAAK--FYSFLVLKKQL 532
+ + VLKK+L
Sbjct: 1219 EKKQDLLFDVSVLKKKL 1235
>gi|148536869 ninein isoform 2 [Homo sapiens]
Length = 2133
Score = 30.4 bits (67), Expect = 4.4
Identities = 44/197 (22%), Positives = 70/197 (35%), Gaps = 24/197 (12%)
Query: 338 KKRGGVHTLLSTAAQDLIHAELKMLFTKCFLSSGFKLGRKMIQKESVREEVGNQNIVETS 397
++ G V L A + + +KM L + + S +E + T+
Sbjct: 1061 EENGDVLLSLQRAHEQAVKENVKMATEISRLQQRLQKLEPGLVMSSCLDEPATEFFGNTA 1120
Query: 398 MMQEPNYQQELSKPQTWKDVIGGSQHSSHEDTNKNINSEQDIVEMVSLAAEESSLMNDLF 457
EP QQ +K V G ++ D E D V + S ++
Sbjct: 1121 EQTEPFLQQNRTK-----QVEGVTRRHVLSDL------EDDEVRDLGSTGTSSVQRQEVK 1169
Query: 458 AQEIEYSPVELESLSNEENIETERWNGRILQMLNRLRESNKMGMQSFSLMKLCRNSDRKQ 517
+E E S L N E TE W + +++L+E LM LC + DR
Sbjct: 1170 IEESEASVEGFSELENSEETRTESW--ELKNQISQLQE---------QLMMLCADCDRAS 1218
Query: 518 AAAK--FYSFLVLKKQL 532
+ + VLKK+L
Sbjct: 1219 EKKQDLLFDVSVLKKKL 1235
>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
sapiens]
Length = 693
Score = 30.4 bits (67), Expect = 4.4
Identities = 28/137 (20%), Positives = 58/137 (42%), Gaps = 3/137 (2%)
Query: 381 KESVREEVGNQNIVETSMMQEPNYQQELSKPQTWKDVIGGSQHSSHEDTNKNINSEQDIV 440
KE + ++ +E S+ + N +++KP + S +D K++ E + +
Sbjct: 258 KEEKKRDIHRIQELERSLSELKN---QMAKPPSLAPPAVTSVVEQLQDEAKHLRQEVEGL 314
Query: 441 EMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIETERWNGRILQMLNRLRESNKMG 500
E + E++ L ++E + E E + E+ ++ R R+ + RLRE K
Sbjct: 315 EGKLQSQVENNQALSLLSKEQKQRLQEQEEMLREQEVQRVREQERLCEQNERLREQQKTL 374
Query: 501 MQSFSLMKLCRNSDRKQ 517
+ ++ RKQ
Sbjct: 375 QEQGERLRKQEQRLRKQ 391
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 30.0 bits (66), Expect = 5.8
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 33/224 (14%)
Query: 303 IKELSSKVIHKQLTSFADTLMVLELAPPTQRL----MMWKKRGGVHTLLSTAAQDLIHAE 358
+KE + V+ QL + + + EL RL +W+ + L D + E
Sbjct: 2228 LKEDNCSVLKDQLRQMS--IHMEELKINISRLEHDKQIWESKAQTEVQLQQKVCDTLQGE 2285
Query: 359 LKMLFTKC------FLSSGFKLGRKMIQKESVREEVGN-QNIVETSMMQEPNY-----QQ 406
K L ++ + SS +L + + +S+++++ + N +E Q+ N QQ
Sbjct: 2286 NKELLSQLEETRHLYHSSQNELAKLESELKSLKDQLTDLSNSLEKCKEQKGNLEGIIRQQ 2345
Query: 407 E-------LSKPQTWKDVIGGSQHSS--HEDTNKNINSEQDIVEMVSLAAEESSLMNDLF 457
E S Q D+ + +S HE+ N EQ I+ ++S E +
Sbjct: 2346 EADIQNSKFSYEQLETDLQASRELTSRLHEEINMK---EQKIISLLSGKEEAIQVAIAEL 2402
Query: 458 AQEIEYSPVELESL---SNEENIETERWNGRILQMLNRLRESNK 498
Q+ + ELE+L EENI E N + + N+L E+ K
Sbjct: 2403 RQQHDKEIKELENLLSQEEEENIVLEEENKKAVDKTNQLMETLK 2446
>gi|56550043 sarcolemma associated protein [Homo sapiens]
Length = 811
Score = 30.0 bits (66), Expect = 5.8
Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 16/153 (10%)
Query: 380 QKESVREEVGNQNIVETSMMQEPNYQQELSKPQTWKDVIGGSQHSSHEDTNKNINSEQDI 439
QK+ + E + + ET + +E Q +K + D + S+ S +DT EQD+
Sbjct: 399 QKKLIVEGHLTKAVEETKLSKE---NQTRAKESDFSDTLSPSKEKSSDDTTDAQMDEQDL 455
Query: 440 VEMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIETERWNGRILQMLNRLRESNKM 499
E ++ + SL+ D +++ + E+E+ +++ E +++ R S +
Sbjct: 456 NEPLA----KVSLLKD----DLQGAQSEIEAKQEIQHLRKE-----LIEAQELARTSKQK 502
Query: 500 GMQSFSLMKLCRNSDRKQAAAKFYSFLVLKKQL 532
+ +L++ R + R Q VL+ QL
Sbjct: 503 CFELQALLEEERKAYRNQVEESTKQIQVLQAQL 535
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 29.6 bits (65), Expect = 7.6
Identities = 33/188 (17%), Positives = 75/188 (39%), Gaps = 22/188 (11%)
Query: 259 PENEKMNETILLSTEEEGFTLDPIDISDIAEKRK--GKKRRLLIDPIKELSSKV-----I 311
P N M + I E++ F P +K + GK +R + +++S +V +
Sbjct: 1378 PGNVTMGKEISKKEEKKTFQKSPKQGRKAVQKERKVGKIKREMTKEERDMSEEVEEMATL 1437
Query: 312 HKQLTSFADTLMVLELAPPTQRLMMWKKRGGVHTLLSTAAQDLIHAELKMLFTKCFLSSG 371
+++ L+++E P Q WKK + +H E + K + +
Sbjct: 1438 EEKVVKQEGKLVMIERTPSWQD---WKK--------AWDEWKQVHGETR----KSWKAWK 1482
Query: 372 FKLGRKMIQKESVREEVGNQNIVETSMMQEPNYQQELSKPQTWKDVIGGSQHSSHEDTNK 431
+ ++++Q+E + G + E M+QE + Q W++++ +
Sbjct: 1483 EEWEKRLLQEEEKLHQAGEKLSPEEEMLQEDKKLKWEEWKQVWENMLSSKSKEQQYKDEE 1542
Query: 432 NINSEQDI 439
+ E+++
Sbjct: 1543 EVTLEEEV 1550
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 29.6 bits (65), Expect = 7.6
Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 2/121 (1%)
Query: 380 QKESVREEVGNQNIVETSMMQEPNYQQELSKPQTWKDVIGGSQHSSHEDTNKNINSEQDI 439
Q+E +RE+ E M ++ QE K + ++ I + E K E+ I
Sbjct: 535 QEEKIREQEEMMQEQEEKMGEQEEKMQEQEKMRRQEEKIREQEEKIREQKEKIREQEEKI 594
Query: 440 VEMVSLAAEESSLMNDLFAQ--EIEYSPVELESLSNEENIETERWNGRILQMLNRLRESN 497
E E+ +M + + E E E E E+ + R ++ + RLR+
Sbjct: 595 WEQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMWEQEVRLRQQE 654
Query: 498 K 498
+
Sbjct: 655 E 655
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,994,874
Number of Sequences: 37866
Number of extensions: 865724
Number of successful extensions: 2601
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 2564
Number of HSP's gapped (non-prelim): 62
length of query: 556
length of database: 18,247,518
effective HSP length: 107
effective length of query: 449
effective length of database: 14,195,856
effective search space: 6373939344
effective search space used: 6373939344
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.