Search of human proteins with 22027560

Search of human proteins with 22027560

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22027560 voltage-dependent calcium channel gamma-6 subunit
isoform c [Homo sapiens]
         (189 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22027560 voltage-dependent calcium channel gamma-6 subunit is...   393   e-110
gi|22027557 voltage-dependent calcium channel gamma-6 subunit is...   379   e-106
gi|22027554 voltage-dependent calcium channel gamma-6 subunit is...   229   1e-60
gi|4502539 voltage-dependent calcium channel gamma-1 subunit [Ho...    63   1e-10
gi|5031949 natural killer cell group 7 sequence [Homo sapiens]         32   0.33 
gi|149192855 HLA-B associated transcript 2-like [Homo sapiens]         32   0.43 
gi|7656948 voltage-dependent calcium channel gamma-4 subunit [Ho...    31   0.56 
gi|40549411 glial cell derived neurotrophic factor isoform 2 pre...    29   2.1  
gi|4503975 glial cell derived neurotrophic factor isoform 1 prep...    29   2.1  
gi|31377722 PERP, TP53 apoptosis effector [Homo sapiens]               29   2.8  
gi|5174405 voltage-dependent calcium channel gamma-2 subunit [Ho...    29   2.8  
gi|239756061 PREDICTED: hypothetical protein [Homo sapiens]            28   3.6  
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]                    28   3.6  
gi|239750588 PREDICTED: hypothetical protein XP_002347440 [Homo ...    28   3.6  
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]                    28   3.6  
gi|239744885 PREDICTED: hypothetical protein XP_002344275 [Homo ...    28   3.6  
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]                    28   3.6  
gi|74275350 translocator protein isoform PBR [Homo sapiens]            28   4.7  
gi|24497587 adenylate cyclase 4 [Homo sapiens]                         28   4.7  
gi|21361975 voltage-dependent calcium channel gamma-7 subunit [H...    28   4.7  
gi|169216064 PREDICTED: hypothetical protein [Homo sapiens]            28   6.1  
gi|169203189 PREDICTED: hypothetical protein LOC338667 [Homo sap...    28   6.1  
gi|169203683 PREDICTED: hypothetical protein LOC338667 [Homo sap...    28   6.1  
gi|169208488 PREDICTED: hypothetical protein [Homo sapiens]            28   6.1  
gi|169202109 PREDICTED: hypothetical protein LOC338667 [Homo sap...    28   6.1  
gi|20336477 B-cell CLL/lymphoma 7C [Homo sapiens]                      28   6.1  
gi|124107616 claudin 23 [Homo sapiens]                                 28   6.1  
gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens]             28   6.1  
gi|222080107 solute carrier family 23 (nucleobase transporters),...    27   8.0  
gi|222080105 solute carrier family 23 (nucleobase transporters),...    27   8.0  

>gi|22027560 voltage-dependent calcium channel gamma-6 subunit
           isoform c [Homo sapiens]
          Length = 189

 Score =  393 bits (1010), Expect = e-110
 Identities = 189/189 (100%), Positives = 189/189 (100%)

Query: 1   MMWSNFFLQEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTE 60
           MMWSNFFLQEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTE
Sbjct: 1   MMWSNFFLQEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTE 60

Query: 61  FWVELNTYKANGSAVCEAAHLGLWKACTKRLWQADVPVDRDTCGPAELPGGLLLLVSLEV 120
           FWVELNTYKANGSAVCEAAHLGLWKACTKRLWQADVPVDRDTCGPAELPGGLLLLVSLEV
Sbjct: 61  FWVELNTYKANGSAVCEAAHLGLWKACTKRLWQADVPVDRDTCGPAELPGGLLLLVSLEV 120

Query: 121 FRHSVRALLQRVSPEPPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFLLLTLPSWPWGSL 180
           FRHSVRALLQRVSPEPPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFLLLTLPSWPWGSL
Sbjct: 121 FRHSVRALLQRVSPEPPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFLLLTLPSWPWGSL 180

Query: 181 CPKRGHRAT 189
           CPKRGHRAT
Sbjct: 181 CPKRGHRAT 189


>gi|22027557 voltage-dependent calcium channel gamma-6 subunit
           isoform b [Homo sapiens]
          Length = 214

 Score =  379 bits (974), Expect = e-106
 Identities = 189/214 (88%), Positives = 189/214 (88%), Gaps = 25/214 (11%)

Query: 1   MMWSNFFLQEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTE 60
           MMWSNFFLQEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTE
Sbjct: 1   MMWSNFFLQEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTE 60

Query: 61  FWVELNTYKANGSAVCEAAHLGLWKACTKRLWQADVPVDRDTCGPAELPG---------- 110
           FWVELNTYKANGSAVCEAAHLGLWKACTKRLWQADVPVDRDTCGPAELPG          
Sbjct: 61  FWVELNTYKANGSAVCEAAHLGLWKACTKRLWQADVPVDRDTCGPAELPGEANCTYFKFF 120

Query: 111 ---------------GLLLLVSLEVFRHSVRALLQRVSPEPPPAPRLTYEYSWSLGCGVG 155
                          GLLLLVSLEVFRHSVRALLQRVSPEPPPAPRLTYEYSWSLGCGVG
Sbjct: 121 TTGENARIFQRTTKKGLLLLVSLEVFRHSVRALLQRVSPEPPPAPRLTYEYSWSLGCGVG 180

Query: 156 AGLILLLGAGCFLLLTLPSWPWGSLCPKRGHRAT 189
           AGLILLLGAGCFLLLTLPSWPWGSLCPKRGHRAT
Sbjct: 181 AGLILLLGAGCFLLLTLPSWPWGSLCPKRGHRAT 214


>gi|22027554 voltage-dependent calcium channel gamma-6 subunit
           isoform a [Homo sapiens]
          Length = 260

 Score =  229 bits (584), Expect = 1e-60
 Identities = 110/110 (100%), Positives = 110/110 (100%)

Query: 1   MMWSNFFLQEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTE 60
           MMWSNFFLQEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTE
Sbjct: 1   MMWSNFFLQEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTE 60

Query: 61  FWVELNTYKANGSAVCEAAHLGLWKACTKRLWQADVPVDRDTCGPAELPG 110
           FWVELNTYKANGSAVCEAAHLGLWKACTKRLWQADVPVDRDTCGPAELPG
Sbjct: 61  FWVELNTYKANGSAVCEAAHLGLWKACTKRLWQADVPVDRDTCGPAELPG 110



 Score =  168 bits (426), Expect = 2e-42
 Identities = 79/79 (100%), Positives = 79/79 (100%)

Query: 111 GLLLLVSLEVFRHSVRALLQRVSPEPPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFLLL 170
           GLLLLVSLEVFRHSVRALLQRVSPEPPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFLLL
Sbjct: 182 GLLLLVSLEVFRHSVRALLQRVSPEPPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFLLL 241

Query: 171 TLPSWPWGSLCPKRGHRAT 189
           TLPSWPWGSLCPKRGHRAT
Sbjct: 242 TLPSWPWGSLCPKRGHRAT 260


>gi|4502539 voltage-dependent calcium channel gamma-1 subunit [Homo
           sapiens]
          Length = 222

 Score = 63.2 bits (152), Expect = 1e-10
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 6/74 (8%)

Query: 38  KVKLALLLAAVGATLAVLSVGTEFWVELNTYKANGSAVCEAAHLGLWKACTKRLWQADVP 97
           KV++ L     G  LA+ +V T+ W  L+ +  + +  CEAAH GLW+ CTKR     +P
Sbjct: 8   KVRVTLFCILAGIVLAMTAVVTDHWAVLSPHMEHHNTTCEAAHFGLWRICTKR-----IP 62

Query: 98  V-DRDTCGPAELPG 110
           + D  TCGP  LPG
Sbjct: 63  MDDSKTCGPITLPG 76



 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)

Query: 111 GLLLLVSLEVFRHSVRALLQRVSPEPPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFLLL 170
           GL +LVS+EV R SV+ ++     +      + Y YSWS  C   A ++L LG    LL 
Sbjct: 148 GLCILVSVEVMRQSVKRMI-----DSEDTVWIEYYYSWSFACACAAFILLFLGGLALLLF 202

Query: 171 TLPSWP 176
           +LP  P
Sbjct: 203 SLPRMP 208


>gi|5031949 natural killer cell group 7 sequence [Homo sapiens]
          Length = 165

 Score = 32.0 bits (71), Expect = 0.33
 Identities = 35/156 (22%), Positives = 61/156 (39%), Gaps = 37/156 (23%)

Query: 41  LALLLAAVGATLAVLSVGTEFWVELNTYKANGSAVCEAAHLGLWKACTKRLWQADVPVDR 100
           LALL  ++G    ++++ T+FW E             +AH GLW      +    + V +
Sbjct: 7   LALLGGSLGLMFCLIALSTDFWFE-------AVGPTHSAHSGLWPTGHGDIISGYIHVTQ 59

Query: 101 D------------------TCGPAELPGGLLLLVSLEVFRHSVRALLQRVSP------EP 136
                              +C P+  P G   LVS      +  +++  ++       + 
Sbjct: 60  TFSIMAVLWALVSVSFLVLSCFPSLFPPGHGPLVSTTAAFAAAISMVVAMAVYTSERWDQ 119

Query: 137 PPAPRLTYEYSWSLGCGVGAGLILL------LGAGC 166
           PP P++   +SWS   G  + ++LL      LGA C
Sbjct: 120 PPHPQIQTFFSWSFYLGWVSAILLLCTGALSLGAHC 155


>gi|149192855 HLA-B associated transcript 2-like [Homo sapiens]
          Length = 2229

 Score = 31.6 bits (70), Expect = 0.43
 Identities = 19/55 (34%), Positives = 27/55 (49%)

Query: 8    LQEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTEFW 62
            L+EE R++  A +    G+G S   P R  K +  L L     T+   S+GTE W
Sbjct: 1574 LEEERRKKEQAVQVPVKGRGLSSRIPPRFAKKQNNLCLEQGDVTVPGSSLGTEIW 1628


>gi|7656948 voltage-dependent calcium channel gamma-4 subunit
          [Homo sapiens]
          Length = 327

 Score = 31.2 bits (69), Expect = 0.56
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 16/63 (25%)

Query: 41 LALLLAAVGA----TLAVLSVGTEFWVELNTYKANGS------------AVCEAAHLGLW 84
          L +LL   GA    +L  +++GT++W+  + +  NG+            A  +  H GLW
Sbjct: 8  LQMLLTTAGAFAAFSLMAIAIGTDYWLYSSAHICNGTNLTMDDGPPPRRARGDLTHSGLW 67

Query: 85 KAC 87
          + C
Sbjct: 68 RVC 70


>gi|40549411 glial cell derived neurotrophic factor isoform 2
           precursor [Homo sapiens]
          Length = 185

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 9   QEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTEFWVELNTY 68
           +E NR+  AA    + G+GR G   +  G V     L A+   +  L +G E   EL   
Sbjct: 63  RERNRQAAAANPENSRGKGRRGQRGKNRGCV-----LTAIHLNVTDLGLGYETKEELIFR 117

Query: 69  KANGSAVCEAA 79
             +GS  C+AA
Sbjct: 118 YCSGS--CDAA 126


>gi|4503975 glial cell derived neurotrophic factor isoform 1
           preproprotein [Homo sapiens]
          Length = 211

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 9   QEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTEFWVELNTY 68
           +E NR+  AA    + G+GR G   +  G V     L A+   +  L +G E   EL   
Sbjct: 89  RERNRQAAAANPENSRGKGRRGQRGKNRGCV-----LTAIHLNVTDLGLGYETKEELIFR 143

Query: 69  KANGSAVCEAA 79
             +GS  C+AA
Sbjct: 144 YCSGS--CDAA 152


>gi|31377722 PERP, TP53 apoptosis effector [Homo sapiens]
          Length = 193

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%)

Query: 140 PRLTYEYSWSLGCGVGAGLILLLGAGC-FLLLTLPSW 175
           P +TY Y+W+ G G  A +IL+   GC F    LP++
Sbjct: 143 PAVTYIYNWAYGFGWAATIILI---GCAFFFCCLPNY 176


>gi|5174405 voltage-dependent calcium channel gamma-2 subunit
          [Homo sapiens]
          Length = 323

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 19/61 (31%)

Query: 43 LLLAAVGA----TLAVLSVGTEFWV------------ELNTYKANGSAVCEAAHLGLWKA 86
          +LL  VGA    +L  ++VGT++W+            E  T K N   +    H GLW+ 
Sbjct: 10 MLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVM---THSGLWRT 66

Query: 87 C 87
          C
Sbjct: 67 C 67


>gi|239756061 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 332

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 16  GAAGRRRAHGQGRSGLTPEREGKVKLALLL 45
           G AGRR  H +G  GL PE  G V++  LL
Sbjct: 134 GEAGRRHVHAEGDGGLEPE-HGDVEVIGLL 162


>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 3874

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 2/87 (2%)

Query: 57   VGTEFWVEL-NTYKANGSAVCEAAHLGLWKACTKRL-WQADVPVDRDTCGPAELPGGLLL 114
            VG E  ++L N  ++      +AAH G +    + L  +A+   +     P EL G L  
Sbjct: 1108 VGAELGLQLQNQGQSLHVERAQAAHTGRYSCVAENLAGRAERKFELSVLVPPELIGDLDP 1167

Query: 115  LVSLEVFRHSVRALLQRVSPEPPPAPR 141
            L ++    HS   LL      PPPA R
Sbjct: 1168 LTNITAALHSPLTLLCEAMGIPPPAIR 1194


>gi|239750588 PREDICTED: hypothetical protein XP_002347440 [Homo
           sapiens]
          Length = 510

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 16  GAAGRRRAHGQGRSGLTPEREGKVKLALLL 45
           G AGRR  H +G  GL PE  G V++  LL
Sbjct: 134 GEAGRRHVHAEGDGGLEPE-HGDVEVIGLL 162


>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 5065

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 2/87 (2%)

Query: 57   VGTEFWVEL-NTYKANGSAVCEAAHLGLWKACTKRL-WQADVPVDRDTCGPAELPGGLLL 114
            VG E  ++L N  ++      +AAH G +    + L  +A+   +     P EL G L  
Sbjct: 2299 VGAELGLQLQNQGQSLHVERAQAAHTGRYSCVAENLAGRAERKFELSVLVPPELIGDLDP 2358

Query: 115  LVSLEVFRHSVRALLQRVSPEPPPAPR 141
            L ++    HS   LL      PPPA R
Sbjct: 2359 LTNITAALHSPLTLLCEAMGIPPPAIR 2385


>gi|239744885 PREDICTED: hypothetical protein XP_002344275 [Homo
           sapiens]
          Length = 510

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 16  GAAGRRRAHGQGRSGLTPEREGKVKLALLL 45
           G AGRR  H +G  GL PE  G V++  LL
Sbjct: 134 GEAGRRHVHAEGDGGLEPE-HGDVEVIGLL 162


>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 3783

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 2/87 (2%)

Query: 57   VGTEFWVEL-NTYKANGSAVCEAAHLGLWKACTKRL-WQADVPVDRDTCGPAELPGGLLL 114
            VG E  ++L N  ++      +AAH G +    + L  +A+   +     P EL G L  
Sbjct: 1017 VGAELGLQLQNQGQSLHVERAQAAHTGRYSCVAENLAGRAERKFELSVLVPPELIGDLDP 1076

Query: 115  LVSLEVFRHSVRALLQRVSPEPPPAPR 141
            L ++    HS   LL      PPPA R
Sbjct: 1077 LTNITAALHSPLTLLCEAMGIPPPAIR 1103


>gi|74275350 translocator protein isoform PBR [Homo sapiens]
          Length = 169

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 9/60 (15%)

Query: 136 PPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFLLLTLPSW---------PWGSLCPKRGH 186
           PP  P + +  + SLGC VG+  +   G   +  L  PSW          WG+L    G+
Sbjct: 3   PPWVPAMGFTLAPSLGCFVGSRFVHGEGLRWYAGLQKPSWHPPHWVLGPVWGTLYSAMGY 62


>gi|24497587 adenylate cyclase 4 [Homo sapiens]
          Length = 1077

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 133 SPEPPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFLLLTLPSWPWGS 179
           SP PPP+  L YE  +SL       L+LLLG     L  L +  W S
Sbjct: 6   SPRPPPSEDLFYETYYSLSQQYPL-LLLLLGIVLCALAALLAVAWAS 51


>gi|21361975 voltage-dependent calcium channel gamma-7 subunit
          [Homo sapiens]
          Length = 275

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 12/55 (21%)

Query: 41 LALLLAAVGATLAVLSVGTEFWVELNTYKANGSAVCE--------AAHLGLWKAC 87
          L+ +  A G  L  ++V T++W+    Y   G+ + +        A H GLW+ C
Sbjct: 12 LSSVFGACGLLLVGIAVSTDYWL----YMEEGTVLPQNQTTEVKMALHAGLWRVC 62


>gi|169216064 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 129

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 15 RGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTE 60
          RG +GRRR+ G+  +  TP   G V L++LL+       V+SVG +
Sbjct: 25 RGRSGRRRSLGRELAPGTPSDCG-VSLSVLLSGCPPRSLVVSVGAQ 69


>gi|169203189 PREDICTED: hypothetical protein LOC338667 [Homo
           sapiens]
          Length = 859

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 109 PGGLLLLVSLEVFRHSVRALLQRVSPEPPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFL 168
           P  LLLL+ L +       L  R S +P P P    E   S+    G  + L  G+G   
Sbjct: 10  PVSLLLLIHLCL-------LHLRASGQPHPTPEAPVEEVVSVQGVRGGSVELACGSGPAP 62

Query: 169 LLTLPSW-PWGSLCPK 183
           LL L S+ P GSL P+
Sbjct: 63  LLVLWSFTPLGSLVPR 78


>gi|169203683 PREDICTED: hypothetical protein LOC338667 [Homo
           sapiens]
          Length = 859

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 109 PGGLLLLVSLEVFRHSVRALLQRVSPEPPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFL 168
           P  LLLL+ L +       L  R S +P P P    E   S+    G  + L  G+G   
Sbjct: 10  PVSLLLLIHLCL-------LHLRASGQPHPTPEAPVEEVVSVQGVRGGSVELACGSGPAP 62

Query: 169 LLTLPSW-PWGSLCPK 183
           LL L S+ P GSL P+
Sbjct: 63  LLVLWSFTPLGSLVPR 78


>gi|169208488 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 150

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 17/52 (32%), Positives = 21/52 (40%)

Query: 122 RHSVRALLQRVSPEPPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFLLLTLP 173
           R S R L     P      RLT    WS+ CG G+  +  + A  F L   P
Sbjct: 79  RDSGRLLSALALPREAATGRLTVMLQWSVSCGGGSWFLWKIEANNFSLALNP 130


>gi|169202109 PREDICTED: hypothetical protein LOC338667 [Homo
           sapiens]
          Length = 859

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 109 PGGLLLLVSLEVFRHSVRALLQRVSPEPPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFL 168
           P  LLLL+ L +       L  R S +P P P    E   S+    G  + L  G+G   
Sbjct: 10  PVSLLLLIHLCL-------LHLRASGQPHPTPEAPVEEVVSVQGVRGGSVELACGSGPAP 62

Query: 169 LLTLPSW-PWGSLCPK 183
           LL L S+ P GSL P+
Sbjct: 63  LLVLWSFTPLGSLVPR 78


>gi|20336477 B-cell CLL/lymphoma 7C [Homo sapiens]
          Length = 217

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 15/36 (41%), Positives = 17/36 (47%)

Query: 9  QEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALL 44
          QEE RRR   G  R+ G+ R G      G   L LL
Sbjct: 55 QEEERRRAGGGAERSRGRERRGRGASPRGGGPLILL 90


>gi|124107616 claudin 23 [Homo sapiens]
          Length = 292

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 12/90 (13%)

Query: 90  RLWQADVP--VDRDTCGPAELPGGLLLLVSLEVFRHSV--RALLQRVSPEPPPAPRLTYE 145
           R WQ D P  V     G      GLL L+ +  + H +  R +L      P PA  +T +
Sbjct: 103 RCWQ-DEPNFVLAGLSGVVLFVAGLLGLIPVSWYNHFLGDRDVL------PAPASPVTVQ 155

Query: 146 YSWSLGCGVGAGLILLLGAGCFLLLTLPSW 175
            S+SL  G     +LLLG G  L L+   W
Sbjct: 156 VSYSLVLGYLGSCLLLLG-GFSLALSFAPW 184


>gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens]
          Length = 580

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 9/40 (22%)

Query: 149 SLGCGVGAGLIL---------LLGAGCFLLLTLPSWPWGS 179
           +L CG+   L+L         LLG GC     LP WP GS
Sbjct: 411 TLWCGLNHSLVLSQSSEFSKELLGCGCGAGGRLPGWPKGS 450


>gi|222080107 solute carrier family 23 (nucleobase transporters),
           member 3 isoform 3 [Homo sapiens]
          Length = 618

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 5/39 (12%)

Query: 132 VSPEPPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFLLL 170
           ++P PPPAP+    +SW   CG      L  G  C L L
Sbjct: 20  LAPLPPPAPQNPSTHSWDPLCG-----SLPWGLSCLLAL 53


>gi|222080105 solute carrier family 23 (nucleobase transporters),
           member 3 isoform 2 [Homo sapiens]
          Length = 610

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 5/39 (12%)

Query: 132 VSPEPPPAPRLTYEYSWSLGCGVGAGLILLLGAGCFLLL 170
           ++P PPPAP+    +SW   CG      L  G  C L L
Sbjct: 20  LAPLPPPAPQNPSTHSWDPLCG-----SLPWGLSCLLAL 53


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.453 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,882,225
Number of Sequences: 37866
Number of extensions: 438417
Number of successful extensions: 1601
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1575
Number of HSP's gapped (non-prelim): 43
length of query: 189
length of database: 18,247,518
effective HSP length: 96
effective length of query: 93
effective length of database: 14,612,382
effective search space: 1358951526
effective search space used: 1358951526
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.