Guide to the Human Genome
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Name: PFTK1 Sequence: fasta or formatted (451aa) NCBI GI: 6912584
Description:

PFTAIRE protein kinase 1

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         25           3
 C cysteine            1.8          8           1
 D aspartate           4.4         20           1
 E glutamate           5.8         26           3
 F phenylalanine       4.2         19           1
 G glycine             6.2         28           2
 H histidine           3.8         17           1
 I isoleucine          3.8         17           2
 K lysine              7.8         35           2
 L leucine            10.6         48           2
 M methionine          2.0          9           1
 N asparagine          4.4         20           2
 P proline             6.0         27           2
 Q glutamine           3.8         17           1
 R arginine            4.4         20           2
 S serine              8.9         40           2
 T threonine           5.8         26           1
 V valine              6.2         28           2
 W tryptophan          1.1          5           1
 Y tyrosine            3.5         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PFTAIRE protein kinase 1 
PFTK2                 0.488   PFTAIRE protein kinase 2 
PCTK1                 0.390   PCTAIRE protein kinase 1 isoform 2 
PCTK1                 0.390   PCTAIRE protein kinase 1 isoform 1 
PCTK2                 0.388   PCTAIRE protein kinase 2 
PCTK3                 0.385   PCTAIRE protein kinase 3 isoform a 
PCTK3                 0.385   PCTAIRE protein kinase 3 isoform b 
PCTK3                 0.385   PCTAIRE protein kinase 3 isoform b 
CDK5                  0.312   cyclin-dependent kinase 5 
CDK3                  0.305   cyclin-dependent kinase 3 
CDK2                  0.292   cyclin-dependent kinase 2 isoform 1 
CDC2                  0.279   cell division cycle 2 isoform 1 
CDC2                  0.276   cell division cycle 2 isoform 3 
CDC2L1                0.229   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.229   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.229   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.229   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.229   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.229   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.226   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.226   cell division cycle 2-like 2 isoform 1 
CDK7                  0.223   cyclin-dependent kinase 7 
CDK2                  0.217   cyclin-dependent kinase 2 isoform 2 
CDK6                  0.215   cyclin-dependent kinase 6 
CDK6                  0.215   cyclin-dependent kinase 6 
CDK10                 0.207   cyclin-dependent kinase 10 isoform a 
CRKRS                 0.200   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.200   Cdc2-related kinase, arginine/serine-rich isoform 1...
CDC2L5                0.195   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.195   cell division cycle 2-like 5 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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