Search of human proteins with 219842250

Search of human proteins with 219842250

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|219842250 periphilin 1 isoform 8 [Homo sapiens]
         (293 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|219842250 periphilin 1 isoform 8 [Homo sapiens]                    593   e-170
gi|41872349 periphilin 1 isoform 4 [Homo sapiens]                     580   e-166
gi|219842247 periphilin 1 isoform 7 [Homo sapiens]                    545   e-155
gi|41872344 periphilin 1 isoform 3 [Homo sapiens]                     531   e-151
gi|41872368 periphilin 1 isoform 2 [Homo sapiens]                     531   e-151
gi|219842244 periphilin 1 isoform 6 [Homo sapiens]                    525   e-149
gi|48255929 periphilin 1 isoform 1 [Homo sapiens]                     476   e-134
gi|41872339 periphilin 1 isoform 5 [Homo sapiens]                     451   e-127
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]          51   1e-06
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi...    47   2e-05
gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]    47   2e-05
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]     45   8e-05
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]     44   1e-04
gi|50083281 KIAA1853 protein [Homo sapiens]                            42   5e-04
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi...    42   6e-04
gi|34996489 pleckstrin homology domain interacting protein [Homo...    40   0.002
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]    40   0.002
gi|52426743 cisplatin resistance-associated overexpressed protei...    40   0.002
gi|19923485 cisplatin resistance-associated overexpressed protei...    40   0.002
gi|4827046 U2 small nuclear RNA auxiliary factor 1-like 2 [Homo ...    40   0.003
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2...    40   0.003
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1...    40   0.003
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]     39   0.004
gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]      39   0.004
gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain c...    39   0.004
gi|62526045 zinc finger protein 638 [Homo sapiens]                     39   0.005
gi|21626468 zinc finger protein 638 [Homo sapiens]                     39   0.005
gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens]     39   0.007
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]           39   0.007
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]           39   0.007

>gi|219842250 periphilin 1 isoform 8 [Homo sapiens]
          Length = 293

 Score =  593 bits (1529), Expect = e-170
 Identities = 293/293 (100%), Positives = 293/293 (100%)

Query: 1   MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH 60
           MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH
Sbjct: 1   MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH 60

Query: 61  YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERP 120
           YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERP
Sbjct: 61  YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERP 120

Query: 121 VQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISE 180
           VQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISE
Sbjct: 121 VQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISE 180

Query: 181 YEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGM 240
           YEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGM
Sbjct: 181 YEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGM 240

Query: 241 VVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF 293
           VVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF
Sbjct: 241 VVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF 293


>gi|41872349 periphilin 1 isoform 4 [Homo sapiens]
          Length = 319

 Score =  580 bits (1494), Expect = e-166
 Identities = 292/312 (93%), Positives = 293/312 (93%), Gaps = 19/312 (6%)

Query: 1   MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH 60
           MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH
Sbjct: 8   MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH 67

Query: 61  YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR----- 115
           YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR     
Sbjct: 68  YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRP 127

Query: 116 --------------NKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK 161
                         +KERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK
Sbjct: 128 GASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK 187

Query: 162 WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIA 221
           WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIA
Sbjct: 188 WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIA 247

Query: 222 SKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAE 281
           SKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAE
Sbjct: 248 SKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAE 307

Query: 282 YDTSTQDFGEPF 293
           YDTSTQDFGEPF
Sbjct: 308 YDTSTQDFGEPF 319


>gi|219842247 periphilin 1 isoform 7 [Homo sapiens]
          Length = 348

 Score =  545 bits (1403), Expect = e-155
 Identities = 273/280 (97%), Positives = 273/280 (97%), Gaps = 2/280 (0%)

Query: 14  RERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 73
           R   PP  H  DESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT
Sbjct: 71  RRSGPP--HRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 128

Query: 74  FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKTSRDTSPS 133
           FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKTSRDTSPS
Sbjct: 129 FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKTSRDTSPS 188

Query: 134 SGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQ 193
           SGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQ
Sbjct: 189 SGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQ 248

Query: 194 PEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLE 253
           PEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLE
Sbjct: 249 PEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLE 308

Query: 254 KSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF 293
           KSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF
Sbjct: 309 KSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF 348


>gi|41872344 periphilin 1 isoform 3 [Homo sapiens]
          Length = 367

 Score =  531 bits (1368), Expect = e-151
 Identities = 272/299 (90%), Positives = 273/299 (91%), Gaps = 21/299 (7%)

Query: 14  RERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 73
           R   PP  H  DESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT
Sbjct: 71  RRSGPP--HRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 128

Query: 74  FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR------------------ 115
           FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR                  
Sbjct: 129 FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPE 188

Query: 116 -NKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN 174
            +KERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN
Sbjct: 189 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN 248

Query: 175 LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD 234
           LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD
Sbjct: 249 LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD 308

Query: 235 CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF 293
           CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF
Sbjct: 309 CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF 367


>gi|41872368 periphilin 1 isoform 2 [Homo sapiens]
          Length = 374

 Score =  531 bits (1368), Expect = e-151
 Identities = 272/299 (90%), Positives = 273/299 (91%), Gaps = 21/299 (7%)

Query: 14  RERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 73
           R   PP  H  DESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT
Sbjct: 78  RRSGPP--HRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 135

Query: 74  FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR------------------ 115
           FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR                  
Sbjct: 136 FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPE 195

Query: 116 -NKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN 174
            +KERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN
Sbjct: 196 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN 255

Query: 175 LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD 234
           LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD
Sbjct: 256 LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD 315

Query: 235 CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF 293
           CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF
Sbjct: 316 CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF 374


>gi|219842244 periphilin 1 isoform 6 [Homo sapiens]
          Length = 434

 Score =  525 bits (1351), Expect = e-149
 Identities = 266/286 (93%), Positives = 267/286 (93%), Gaps = 19/286 (6%)

Query: 1   MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH 60
           MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH
Sbjct: 1   MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH 60

Query: 61  YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR----- 115
           YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR     
Sbjct: 61  YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRP 120

Query: 116 --------------NKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK 161
                         +KERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK
Sbjct: 121 GASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK 180

Query: 162 WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIA 221
           WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIA
Sbjct: 181 WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIA 240

Query: 222 SKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI 267
           SKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI
Sbjct: 241 SKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI 286


>gi|48255929 periphilin 1 isoform 1 [Homo sapiens]
          Length = 458

 Score =  476 bits (1225), Expect = e-134
 Identities = 246/273 (90%), Positives = 247/273 (90%), Gaps = 21/273 (7%)

Query: 14  RERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 73
           R   PP  H  DESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT
Sbjct: 71  RRSGPP--HRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 128

Query: 74  FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR------------------ 115
           FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR                  
Sbjct: 129 FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPE 188

Query: 116 -NKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN 174
            +KERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN
Sbjct: 189 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN 248

Query: 175 LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD 234
           LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD
Sbjct: 249 LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD 308

Query: 235 CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI 267
           CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI
Sbjct: 309 CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI 341


>gi|41872339 periphilin 1 isoform 5 [Homo sapiens]
          Length = 258

 Score =  451 bits (1161), Expect = e-127
 Identities = 229/249 (91%), Positives = 230/249 (92%), Gaps = 19/249 (7%)

Query: 1   MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH 60
           MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH
Sbjct: 8   MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH 67

Query: 61  YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQH------ 114
           YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQH      
Sbjct: 68  YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRP 127

Query: 115 -------------RNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK 161
                        R+KERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK
Sbjct: 128 GASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK 187

Query: 162 WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIA 221
           WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIA
Sbjct: 188 WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIA 247

Query: 222 SKTKEIEQV 230
           SKTKEIEQV
Sbjct: 248 SKTKEIEQV 256


>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
          Length = 715

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 59/228 (25%), Positives = 88/228 (38%), Gaps = 24/228 (10%)

Query: 14  RERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 73
           R R+P +     + G      DH  SR P  ++ +    R S     + R RSP K    
Sbjct: 475 RSRSPSKERDHSQLGSPSKERDHRRSRSPS-KERQCRQSRSSSKERDHRRSRSPSKERQR 533

Query: 74  FFRESPVGRKDSPHSRSGSSV----SSRSYSPER--------SKSYSFHQSQHRNKERPV 121
               SP   +D   SRS S       SRS S ER        SK     QS+  ++ER  
Sbjct: 534 RQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDH 593

Query: 122 QSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEY 181
              ++    S  S    SS +     SR   KE   + S+ ++++ + S +S +P   ++
Sbjct: 594 SRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPS-QSTVPRSPDW 652

Query: 182 EAGSTAPLFTDQPEEPESNTTHGIELF---------EDSQL-TTRSKA 219
           +   T      Q   P   ++H    F         +DSQ   T SKA
Sbjct: 653 KRSPTRTSSLSQNRTPSKTSSHSPSTFPSGGQTLSQDDSQADATTSKA 700



 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 50/186 (26%), Positives = 72/186 (38%), Gaps = 16/186 (8%)

Query: 10  ERIPRERAPPRSHPS-DESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH-------- 60
           ER  R  + PR      +SG    + DHS SR P     RD  R +S Y +         
Sbjct: 374 ERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPN--KARDRSRSRSPYKARDRSRSRSP 431

Query: 61  -----YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR 115
                 +R RSPYK  +     SP   +D   SRS +    RS S   SK     Q    
Sbjct: 432 NKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSP 491

Query: 116 NKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNL 175
           +KER  +  ++         S  SS +   + SR   KE     S+   ++ ++S   + 
Sbjct: 492 SKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSP 551

Query: 176 PEISEY 181
            E  E+
Sbjct: 552 SEEREH 557



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 3/153 (1%)

Query: 3   SEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH-Y 61
           S   Y+     R R+P ++     S   +   D S SR P     RD  R +S   +   
Sbjct: 416 SRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPN--KARDHSRSRSPNKARDR 473

Query: 62  ARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERPV 121
           +R RSP K  +     SP   +D   SRS S       S   SK     +S+  +KER  
Sbjct: 474 SRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQR 533

Query: 122 QSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKE 154
           +  ++       S S   S +   + SR   KE
Sbjct: 534 RQSRSPNKERDRSQSRSPSEEREHRQSRSPSKE 566



 Score = 32.3 bits (72), Expect = 0.51
 Identities = 36/160 (22%), Positives = 64/160 (40%), Gaps = 32/160 (20%)

Query: 14  RERAPPRSHPSDES-------GYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYA---- 62
           + R+P RS    +         + W R+ HS +R    + +     R S   SH      
Sbjct: 283 QSRSPRRSRSGSQKRTHSRVRSHSWKRN-HSRARSRTRKGILSQMGRHSQSRSHSKGKSQ 341

Query: 63  -RERSPYKRDNTFFRESPVGRKDSPHSRSGS--------------SVSSRSYSPERSKSY 107
            + R+P +  +  +  +P   +   HSRS S              S  S+S SP + + +
Sbjct: 342 NQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDH 401

Query: 108 SFHQSQHRNKER-----PVQSLKTSRDTSPSSGSAVSSSK 142
           S  +S ++ ++R     P ++   SR  SP+     S S+
Sbjct: 402 SRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSR 441


>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
           sapiens]
          Length = 674

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 60/196 (30%), Positives = 72/196 (36%), Gaps = 46/196 (23%)

Query: 2   WSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHY 61
           WS  R    R  R R+  R H    S     RD H  SR P  R    G RR+S   SH 
Sbjct: 422 WSRSRSRSRRYSRSRSRGRRHSGGGS-----RDGHRYSRSPARRGGY-GPRRRSRSRSHS 475

Query: 62  ARERSPYKRDNTFFRESPVGRKDSPHS----RSGSSVSSRSYSPERSKSYSFHQSQHRNK 117
                 Y+R     R     R  S  S    RS S   SRS+SP  S+S           
Sbjct: 476 GDR---YRRGGRGLRHHSSSRSRSSWSLSPSRSRSLTRSRSHSPSPSQS----------- 521

Query: 118 ERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPE 177
               +S   SR  SPS             PS   EK    AAS    EKL+K++ +    
Sbjct: 522 ----RSRSRSRSQSPS-------------PSPAREKLTRPAASPAVGEKLKKTEPA---- 560

Query: 178 ISEYEAGSTAPLFTDQ 193
            +  E G+  P  T Q
Sbjct: 561 -AGKETGAAKPKLTPQ 575



 Score = 32.3 bits (72), Expect = 0.51
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 52  RRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQ 111
           RR S  SS  +  R+   R ++  R S   R+   + RSG    SRS S  RS+S S   
Sbjct: 375 RRSSSSSSSSSASRTSSSRSSS--RSSSRSRRGGGYYRSGRHARSRSRSWSRSRSRSRRY 432

Query: 112 SQHRNKER 119
           S+ R++ R
Sbjct: 433 SRSRSRGR 440


>gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]
          Length = 282

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 49/162 (30%), Positives = 67/162 (41%), Gaps = 29/162 (17%)

Query: 14  RERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 73
           R R+P R H S   G   +R   S SR    R  R  + R  +  S Y+R  SPY R   
Sbjct: 124 RSRSPRRRHRSRSRGPSCSRS-RSRSRYRGSRYSRSPYSRSPYSRSRYSR--SPYSRSR- 179

Query: 74  FFRESPVG-----------------RKDSPHSRSGSSVSSRSYSPERS----KSYSFHQS 112
            +RES  G                      HS+SGSS SSRS S  +S    +S S   S
Sbjct: 180 -YRESRYGGSHYSSSGYSNSRYSRYHSSRSHSKSGSSTSSRSASTSKSSSARRSKSSSVS 238

Query: 113 QHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKE 154
           + R++ R     ++    S     + S SK   +P +  E+E
Sbjct: 239 RSRSRSRSSSMTRSPPRVSKRKSKSRSRSK---RPPKSPEEE 277



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 51/194 (26%), Positives = 68/194 (35%), Gaps = 21/194 (10%)

Query: 6   RYEYERIPRERAPPRSHPSDESGY-RWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARE 64
           RY    +PR R       S   GY R +R     SR P  R       R    S   +R 
Sbjct: 91  RYGRRDLPRSRQGEPRGRSRGGGYGRRSRSYGRRSRSPRRRHRS----RSRGPSCSRSRS 146

Query: 65  RSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRS-YSPER-------SKSYS------FH 110
           RS Y+     +  SP  R     SR   S  SRS Y   R       S  YS      +H
Sbjct: 147 RSRYRGSR--YSRSPYSRSPYSRSRYSRSPYSRSRYRESRYGGSHYSSSGYSNSRYSRYH 204

Query: 111 QSQHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKS 170
            S+  +K     S +++  +  SS     SS V    SR     +  +  + +  K +  
Sbjct: 205 SSRSHSKSGSSTSSRSASTSKSSSARRSKSSSVSRSRSRSRSSSMTRSPPRVSKRKSKSR 264

Query: 171 DESNLPEISEYEAG 184
             S  P  S  E G
Sbjct: 265 SRSKRPPKSPEEEG 278



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 41/144 (28%), Positives = 57/144 (39%), Gaps = 13/144 (9%)

Query: 3   SEGRYE---YERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSS 59
           S  RY    Y R P  R+P        S  R++R  +S SR  E R     +    + +S
Sbjct: 146 SRSRYRGSRYSRSPYSRSP-------YSRSRYSRSPYSRSRYRESRYGGSHYSSSGYSNS 198

Query: 60  HYAR---ERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRN 116
            Y+R    RS  K  ++    S    K S   RS SS  SRS S  RS S +    +   
Sbjct: 199 RYSRYHSSRSHSKSGSSTSSRSASTSKSSSARRSKSSSVSRSRSRSRSSSMTRSPPRVSK 258

Query: 117 KERPVQSLKTSRDTSPSSGSAVSS 140
           ++   +S       SP     +SS
Sbjct: 259 RKSKSRSRSKRPPKSPEEEGQMSS 282


>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
          Length = 951

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 46/172 (26%), Positives = 68/172 (39%), Gaps = 11/172 (6%)

Query: 6   RYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKS-FYSSHYARE 64
           +Y      R R+  ++  S  S YR  R   S SR P  R      RR+     + Y   
Sbjct: 773 KYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRRRAHSPERRREERSVPTAYRVS 832

Query: 65  RSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSK----------SYSFHQSQH 114
           RSP          SP  +K    SRS +   +RS S   SK          ++S H +  
Sbjct: 833 RSPGASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAAPAAHSAHSASV 892

Query: 115 RNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEK 166
              E    S + SR  S    + +SS+ V    S++T+  +A+  +  AA K
Sbjct: 893 SPVESRGSSQERSRGVSQEKEAQISSAIVSSVQSKITQDLMAKVRAMLAASK 944



 Score = 37.0 bits (84), Expect = 0.021
 Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 25/222 (11%)

Query: 14  RERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 73
           + + PPR    ++   +  +   + SR P+Y            +SS  +R RS  K  ++
Sbjct: 744 KSKDPPREEEKEKKKKKHKKRSRTRSRSPKY------------HSSSKSRSRSHSKAKHS 791

Query: 74  FFRESPVGRKDSPHSRSGS-SVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKTSRDTSP 132
                P   +    SRS S S   R++SPER +      + +R    P  S K +R  SP
Sbjct: 792 L----PSAYRTVRRSRSRSRSPRRRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRSP 847

Query: 133 --SSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLF 190
                   S S+   K    +     +AA + AA     +  +++  +     GS+    
Sbjct: 848 HEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAAPAAHSAHSASVSPVE--SRGSSQERS 905

Query: 191 TDQPEEPESNTTHGIELFEDSQLT----TRSKAIASKTKEIE 228
               +E E+  +  I     S++T     + +A+ + +K ++
Sbjct: 906 RGVSQEKEAQISSAIVSSVQSKITQDLMAKVRAMLAASKNLQ 947


>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
          Length = 494

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 18/130 (13%)

Query: 48  RDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSY 107
           + G RR+  YS    R RS + R  +  R S   R     SRSGSS SS S S  RS+S 
Sbjct: 176 KPGSRRRRSYS----RSRS-HSRSRSRSRHSRKSR-----SRSGSSKSSHSKSRSRSRSG 225

Query: 108 SFHQSQHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKL 167
           S  +S+ R++ +     K  +  SPS   + S S    K SR   K+ AE       EK+
Sbjct: 226 SRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGK-SRSKSKDQAE-------EKI 277

Query: 168 EKSDESNLPE 177
           + +D    P+
Sbjct: 278 QNNDNVGKPK 287



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 76/300 (25%), Positives = 115/300 (38%), Gaps = 66/300 (22%)

Query: 12  IPRERAPPR--SHPSDESGY---RWTRDDHSASRQPEYR-------------DMRDGFRR 53
           +   R P R  S+ S  SGY   R  RD +    + EYR             D++D  R+
Sbjct: 67  VEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQ 126

Query: 54  K---SFYSSHYARER---------SPYKRDNTFFRESPV-GRK-----DSPHSRSGSSVS 95
               ++  +H  R+          S  KR       + V GRK     D P SR      
Sbjct: 127 AGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRR----- 181

Query: 96  SRSYSPERSKSYSFHQSQHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKEL 155
            RSYS  RS S S  +S+H  K R              SGS+ SS       SR   +  
Sbjct: 182 RRSYSRSRSHSRSRSRSRHSRKSR------------SRSGSSKSSHSKSRSRSRSGSRSR 229

Query: 156 AEAASKWAAEKLEKSDESNLPEISE-----YEAGSTAPLFTDQPEEPESNTTHGIELFED 210
           +++ S+  +    K ++S  P   +     + AG +     DQ EE   N  +  +    
Sbjct: 230 SKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSR 289

Query: 211 SQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGER 270
           S    +SK   SK++   Q  R + E  G V      +  S EKS++ +  ++  + G R
Sbjct: 290 SPSRHKSK---SKSRSRSQERRVEEEKRGSV-----SRGRSQEKSLRQSRSRSRSKGGSR 341



 Score = 32.0 bits (71), Expect = 0.66
 Identities = 42/166 (25%), Positives = 64/166 (38%), Gaps = 8/166 (4%)

Query: 4   EGRYEYER---IPRERAPPRSHPSDESGYRWTRDDHSASR-QPEYRDMRDGFRRKSFYSS 59
           E R E E+   + R R+  +S     S  R      S SR + + +D R G +R    S 
Sbjct: 306 ERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESR 365

Query: 60  HYARERSPYKRDNT--FFRESPVGRKDSPHSRSGSSVSSRSYSPERSK--SYSFHQSQHR 115
             +R RS  +R       R+S  G              SRS S   SK   ++  +S  R
Sbjct: 366 SRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQR 425

Query: 116 NKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK 161
                 ++  T+++T   S S   S   L   SR   K  ++  S+
Sbjct: 426 EGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSR 471



 Score = 31.6 bits (70), Expect = 0.87
 Identities = 52/238 (21%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 3   SEGRYEYERIP-RERAPPRSHPS--------DESGYRWTRDDHSA---SRQPEYRDMRDG 50
           S  + E  R P +E++  RSH +        D++  +   +D+     SR P     +  
Sbjct: 240 SRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSK 299

Query: 51  FRRKSFYSSHYARERSPYKRDNT---FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSY 107
            R +S        +R    R  +     R+S    +    SRS S   S+S    + +  
Sbjct: 300 SRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKR 359

Query: 108 SFHQSQHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKL 167
           S  +S+ R++ R        R +   S +  S  K  +   R   +  + + SK   E+ 
Sbjct: 360 SREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSK---ERE 416

Query: 168 EKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTK 225
               ES+  E      G +    T+Q     S +    +    S+  +RSK+ ASKT+
Sbjct: 417 HAKSESSQRE----GRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKS-ASKTR 469



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 9/123 (7%)

Query: 3   SEGRYEYERIPRERAPPRSHPSDESGYRWTRD-DHSASRQPEYRDMRDGFRRKSFYSSHY 61
           S  R + ER  R+R   R   +  S  +   D D S SR P     ++    KS  S   
Sbjct: 368 SRSRSKSER-SRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQRE 426

Query: 62  ARERSPYKRDNTFFRE-SPVGRKDSPH------SRSGSSVSSRSYSPERSKSYSFHQSQH 114
            R  S     N   R  S    K  P+      SRS S+  +RS S  RS+S S   S+ 
Sbjct: 427 GRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRS 486

Query: 115 RNK 117
           R++
Sbjct: 487 RSR 489


>gi|50083281 KIAA1853 protein [Homo sapiens]
          Length = 611

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 44/148 (29%), Positives = 57/148 (38%), Gaps = 16/148 (10%)

Query: 16  RAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFF 75
           R+ P    S  S Y  TR    +SR P  R      + +S  S   +  RSP     +  
Sbjct: 382 RSSPMKGCSRSSSYASTRSSSHSSRSPNPRASPRYTQSRSTSSEKRSYSRSPSYSSKSGK 441

Query: 76  RESPVGRKDSPHSRSGSSVSSRSYSP--ERSKSYSFHQSQHRNKERPVQSLKTSRDTSPS 133
           R  P     S  SRS  S S   YSP  ER   YS   SQ R +ER   + +  R  SP 
Sbjct: 442 RSPP-----SRSSRSRRSPSYSRYSPSRERDPKYSEKDSQQRERER---ARRRRRSYSP- 492

Query: 134 SGSAVSSSKVLDKPSRLTEKELAEAASK 161
                   +  D PS L  + +  A  +
Sbjct: 493 -----MRKRRRDSPSHLEARRITSARKR 515



 Score = 35.0 bits (79), Expect = 0.078
 Identities = 51/192 (26%), Positives = 67/192 (34%), Gaps = 43/192 (22%)

Query: 3   SEGRYEYERIPR------ERAPPRSHPSDESGYRWTRDDHSASRQPEY-------RDMRD 49
           S  +  Y R P       +R+PP           ++R   S  R P+Y       R+   
Sbjct: 423 SSEKRSYSRSPSYSSKSGKRSPPSRSSRSRRSPSYSRYSPSRERDPKYSEKDSQQRERER 482

Query: 50  GFRRKSFYSSHYARER------------SPYKRDNTFFRESPVGRKD---------SPHS 88
             RR+  YS    R R            S  KR   ++R SP              S  S
Sbjct: 483 ARRRRRSYSPMRKRRRDSPSHLEARRITSARKRPIPYYRPSPSSSGSLSSTSSWYSSSSS 542

Query: 89  RSGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPS 148
           RS S     SYS  RS+S S  +S+ R       S  +SR  SP S S   S       S
Sbjct: 543 RSASR----SYSRSRSRSRSRRRSRTR-----TSSSSSSRSPSPGSRSRSRSRSRSRSRS 593

Query: 149 RLTEKELAEAAS 160
           R   +  + A S
Sbjct: 594 RSQSRSYSSADS 605



 Score = 34.7 bits (78), Expect = 0.10
 Identities = 36/110 (32%), Positives = 43/110 (39%), Gaps = 18/110 (16%)

Query: 12  IPRERAPPRSHPSDESGYRW--TRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYK 69
           IP  R  P S  S  S   W  +    SASR                YS   +R RS  +
Sbjct: 517 IPYYRPSPSSSGSLSSTSSWYSSSSSRSASRS---------------YSRSRSRSRSR-R 560

Query: 70  RDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKER 119
           R  T    S   R  SP SRS S   SRS S  RS+S S+  +   +  R
Sbjct: 561 RSRTRTSSSSSSRSPSPGSRSRSRSRSRSRSRSRSQSRSYSSADSYSSTR 610



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 3/128 (2%)

Query: 7   YEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERS 66
           +E ++  RE    R H +       T    S  ++ + +  R   RR S YS    +++ 
Sbjct: 77  WERDKTCRELGATRGHSASHDK-DLTPPPSSRGKKKKKKSTRKKRRRSSSYSPSPVKKKK 135

Query: 67  PYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKT 126
             K+ +   +      K   HS S      R     + +S S  +  HR++     S   
Sbjct: 136 --KKSSKKHKRRRSFSKKRRHSSSSPKSKRRDEKRHKKQSRSRPRKSHRHRHHRCPSRSQ 193

Query: 127 SRDTSPSS 134
           S ++ PSS
Sbjct: 194 SSESRPSS 201


>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
           sapiens]
          Length = 1031

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 61/228 (26%), Positives = 77/228 (33%), Gaps = 37/228 (16%)

Query: 7   YEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERS 66
           Y      R R+  RS     S  R  R D   SR  + RD R    R+   S    R RS
Sbjct: 8   YRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRD-RDRR----RERSRSRDKRRSRS 62

Query: 67  PYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKT 126
              RD    R S    +D    R  S    R  S  RS+      S   NK +  ++   
Sbjct: 63  ---RDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTEN--R 117

Query: 127 SRDTSPSSGSAVSSSKVLDKPSRLTEKE-----------------LAEAASKWAAEKLEK 169
           SR    + G   S  K  DK  +  EKE                   E   KW  E+ +K
Sbjct: 118 SRSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKK 177

Query: 170 SDES---NLPEISEYEAGSTAPLFTDQPE-------EPESNTTHGIEL 207
           + E+      EI E + G    L  D  +       E E N   G EL
Sbjct: 178 AMENIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEEL 225


>gi|34996489 pleckstrin homology domain interacting protein [Homo
            sapiens]
          Length = 1821

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 7/132 (5%)

Query: 52   RRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQ 111
            R  +F+  H +   S YK    F + + + ++    +RS S  SS + SPER K     Q
Sbjct: 1409 RLSAFFEEHISSVLSDYKSALRFHKRNTITKRRKKRNRSSSVSSSAASSPERKKRILKPQ 1468

Query: 112  SQHRNK----ERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSR-LTEKELAEAASKWAAEK 166
             +  +       P +S+    + +  +G   SSS V  + +R + +  + E  S  +A K
Sbjct: 1469 LKSESSTSAFSTPTRSIPPRHNAAQINGKTESSSVVRTRSNRVVVDPVVTEQPSTSSAAK 1528

Query: 167  --LEKSDESNLP 176
              + K++ S +P
Sbjct: 1529 TFITKANASAIP 1540


>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
          Length = 1462

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 8/174 (4%)

Query: 37  SASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRD----NTFFRESPVGRKDSPHSRSGS 92
           S++R+ +    R+   R S  SSH++ +R   K D    ++    S    +   HS+S S
Sbjct: 470 SSTRRMKSSCDRERSSRSSSLSSHHSSKRDWSKSDKDVQSSLTHSSRDSYRSKSHSQSYS 529

Query: 93  SVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTE 152
             SSRS +  +S S+S  +S+ R+  +     + S+    ++     +  V  +P R T 
Sbjct: 530 RGSSRSRTASKSSSHSRSRSKSRSSSKSGHRKRASKSPRKTASQLSENKPVKTEPLRATM 589

Query: 153 KELAE-AASKWAAEKLEKSDESNLPEISEYEAGST--APLFTDQPEEPESNTTH 203
            +          AE +     S+ P  S ++ G     P + ++ +E ++ TTH
Sbjct: 590 AQNENVVVQPVVAENIPVIPLSDSPPPSRWKPGQKPWKPSY-ERIQEMKAKTTH 642



 Score = 38.1 bits (87), Expect = 0.009
 Identities = 39/135 (28%), Positives = 50/135 (37%), Gaps = 23/135 (17%)

Query: 8    EYERIPRERAPPRSHPSDESGYRWTRDDHSASRQP------------------EYRDMRD 49
            E  +  R    PR+  S       +RDD S SR P                   Y   R 
Sbjct: 1280 EVRKTARLNRRPRNQESSSDEQTPSRDDDSQSRSPSRSRSKSETKSRHRTRSVSYSHSRS 1339

Query: 50   GFR--RKSFYSSHYARERSP--YKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSP-ERS 104
              R    S+ S  Y+R RS   Y R  T  R S      S  + S S   S SY P  RS
Sbjct: 1340 RSRSSTSSYRSRSYSRSRSRGWYSRGRTRSRSSSYRSYKSHRTSSRSRSRSSSYDPHSRS 1399

Query: 105  KSYSFHQSQHRNKER 119
            +SY++     R++ R
Sbjct: 1400 RSYTYDSYYSRSRSR 1414



 Score = 35.0 bits (79), Expect = 0.078
 Identities = 39/121 (32%), Positives = 47/121 (38%), Gaps = 20/121 (16%)

Query: 14   RERAPPRSHPSDESGYRW-TRD---DHSASRQPEYRDMRDGFRRKSF--------YSSHY 61
            + R+P RS    E+  R  TR     HS SR    R     +R +S+        YS   
Sbjct: 1310 QSRSPSRSRSKSETKSRHRTRSVSYSHSRSRS---RSSTSSYRSRSYSRSRSRGWYSRGR 1366

Query: 62   ARERSP----YKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFH-QSQHRN 116
             R RS     YK   T  R         PHSRS S      YS  RS+S S    S HR 
Sbjct: 1367 TRSRSSSYRSYKSHRTSSRSRSRSSSYDPHSRSRSYTYDSYYSRSRSRSRSQRSDSYHRG 1426

Query: 117  K 117
            +
Sbjct: 1427 R 1427



 Score = 31.6 bits (70), Expect = 0.87
 Identities = 49/225 (21%), Positives = 83/225 (36%), Gaps = 17/225 (7%)

Query: 9   YERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPY 68
           YERI   +A        +S Y       + S    ++  ++    +S YS +  R     
Sbjct: 630 YERIQEMKAKTTHLLPIQSTYSLANIKETGSSSSYHKREKNSESDQSTYSKYSDRSSESS 689

Query: 69  KRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKTSR 128
            R  +    S    +    SRS +S  SRS SP  S+S+S      RNK           
Sbjct: 690 PRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPS-SRSHS------RNK---------YS 733

Query: 129 DTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAP 188
           D S  S S+ S + +     R  ++ L  +  K +    + S  S     S+Y  G    
Sbjct: 734 DHSQCSRSS-SYTSISSDDGRRAKRRLRSSGKKNSVSHKKHSSSSEKTLHSKYVKGRDRS 792

Query: 189 LFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQ 233
               +  E  S+  +  +  + S   T+S     K  ++E+ + +
Sbjct: 793 SCVRKYSESRSSLDYSSDSEQSSVQATQSAQEKEKQGQMERTHNK 837



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 5/98 (5%)

Query: 96   SRSYSPERSKSYSFHQSQHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSR--LTEK 153
            S+S SP RS+S S  +S+HR +     S   SR  S SS S+  S       SR   +  
Sbjct: 1309 SQSRSPSRSRSKSETKSRHRTRS---VSYSHSRSRSRSSTSSYRSRSYSRSRSRGWYSRG 1365

Query: 154  ELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFT 191
                 +S + + K  ++   +    S Y+  S +  +T
Sbjct: 1366 RTRSRSSSYRSYKSHRTSSRSRSRSSSYDPHSRSRSYT 1403


>gi|52426743 cisplatin resistance-associated overexpressed protein
           [Homo sapiens]
          Length = 432

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 48/162 (29%), Positives = 64/162 (39%), Gaps = 10/162 (6%)

Query: 4   EGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYAR 63
           E   E ER  RER   R     E      R+    SR       R   RR S    H  R
Sbjct: 258 EKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDH-KR 316

Query: 64  ERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYS----FHQSQHRNKER 119
            RS  +R +     S   R+   H RS     SRS    RSKS       H+S+ R++E+
Sbjct: 317 SRSRERRRS----RSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQ 372

Query: 120 PVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK 161
             +S +  +  S    S+V S    +K S  T  E  E+ +K
Sbjct: 373 DRKSKEKEKRGSDDKKSSVKSGS-REKQSEDTNTESKESDTK 413


>gi|19923485 cisplatin resistance-associated overexpressed protein
           [Homo sapiens]
          Length = 432

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 48/162 (29%), Positives = 64/162 (39%), Gaps = 10/162 (6%)

Query: 4   EGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYAR 63
           E   E ER  RER   R     E      R+    SR       R   RR S    H  R
Sbjct: 258 EKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDH-KR 316

Query: 64  ERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYS----FHQSQHRNKER 119
            RS  +R +     S   R+   H RS     SRS    RSKS       H+S+ R++E+
Sbjct: 317 SRSRERRRS----RSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQ 372

Query: 120 PVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK 161
             +S +  +  S    S+V S    +K S  T  E  E+ +K
Sbjct: 373 DRKSKEKEKRGSDDKKSSVKSGS-REKQSEDTNTESKESDTK 413


>gi|4827046 U2 small nuclear RNA auxiliary factor 1-like 2 [Homo
           sapiens]
          Length = 482

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 5/107 (4%)

Query: 20  RSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESP 79
           R +PS +  Y+  R+  S  +   +R  +   R       H +R R    R+    R+  
Sbjct: 380 RRNPSPDHSYK--RNGESERKSSRHRGKKSHKRTSKSRERHNSRSRG---RNRDRSRDRS 434

Query: 80  VGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKT 126
            GR     SRS S  S RS S   S+S S  + +  N++R VQS K+
Sbjct: 435 RGRGSRSRSRSRSRRSRRSRSQSSSRSRSRGRRRSGNRDRTVQSPKS 481


>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
           [Homo sapiens]
          Length = 1481

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 60/185 (32%), Positives = 83/185 (44%), Gaps = 34/185 (18%)

Query: 17  APPRSHPSDESGY-RWTRDDHSASRQ----PEYRD---MRDGFRRKSFYS------SHYA 62
           +P RSH S  S Y  + +   S SR+    P Y++    +   R  S YS      S Y+
Sbjct: 249 SPSRSHTS--SNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSRRQRSVSPYS 306

Query: 63  RERSP-YKRDNTFFRESP--VGRKDSP------HSRSGSSVSSRSYSPERSKS--YSFHQ 111
           R RS  Y+R  ++   SP   GR+ S        S S S + SR     RS+S  YS H 
Sbjct: 307 RRRSSSYERSGSYSGRSPSPYGRRRSSSPFLSKRSLSRSPLPSRKSMKSRSRSPAYSRHS 366

Query: 112 SQHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSD 171
           S H  K+R   S   SR +S S      +S +  + SR  +KE A AA   AA K++  +
Sbjct: 367 SSHSKKKR---SSSRSRHSSISPVRLPLNSSLGAELSR-KKKERAAAA---AAAKMDGKE 419

Query: 172 ESNLP 176
               P
Sbjct: 420 SKGSP 424


>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
           [Homo sapiens]
          Length = 1490

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 60/185 (32%), Positives = 83/185 (44%), Gaps = 34/185 (18%)

Query: 17  APPRSHPSDESGY-RWTRDDHSASRQ----PEYRD---MRDGFRRKSFYS------SHYA 62
           +P RSH S  S Y  + +   S SR+    P Y++    +   R  S YS      S Y+
Sbjct: 249 SPSRSHTS--SNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSRRQRSVSPYS 306

Query: 63  RERSP-YKRDNTFFRESP--VGRKDSP------HSRSGSSVSSRSYSPERSKS--YSFHQ 111
           R RS  Y+R  ++   SP   GR+ S        S S S + SR     RS+S  YS H 
Sbjct: 307 RRRSSSYERSGSYSGRSPSPYGRRRSSSPFLSKRSLSRSPLPSRKSMKSRSRSPAYSRHS 366

Query: 112 SQHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSD 171
           S H  K+R   S   SR +S S      +S +  + SR  +KE A AA   AA K++  +
Sbjct: 367 SSHSKKKR---SSSRSRHSSISPVRLPLNSSLGAELSR-KKKERAAAA---AAAKMDGKE 419

Query: 172 ESNLP 176
               P
Sbjct: 420 SKGSP 424


>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
          Length = 484

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 51/200 (25%), Positives = 74/200 (37%), Gaps = 12/200 (6%)

Query: 11  RIPRERAPPRSHPSDESGYRWT----RDDHSASRQPEYRDMRDGFRRKSFYSSHYARERS 66
           R  R R+  RSH    S  R      R  HS  R    R      R K        R ++
Sbjct: 267 RRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKT-RDKKKEDKEKKRSKT 325

Query: 67  PYKRDNTFFRESPVGR-KDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLK 125
           P K  +T  R     R +    SRSG+    +  SP+R  S S    +H+ +++  +  +
Sbjct: 326 PPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKE 385

Query: 126 TSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYE-AG 184
            SRD    S S    SK  +K     ++E    + K   +     DE      SE E   
Sbjct: 386 RSRDERERSTSKKKKSKDKEK-----DRERKSESDKDVKQVTRDYDEEEQGYDSEKEKKE 440

Query: 185 STAPLFTDQPEEPESNTTHG 204
              P+ T  P+  E +   G
Sbjct: 441 EKKPIETGSPKTKECSVEKG 460


>gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]
          Length = 344

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 45/157 (28%), Positives = 61/157 (38%), Gaps = 13/157 (8%)

Query: 15  ERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYK---RD 71
           E  P  SH    SG   +R    + R+   R  R    R    S   +R RS  K   R 
Sbjct: 180 EDKPRTSHRRSYSG---SRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRS 236

Query: 72  NTFFRESPVGRKDSPHSRSGSSVSSRSYSP---ERSKSYSFHQSQHRNKERPVQSLKTS- 127
            +  R+S    K  P S  GS   SRS S    E+S+S S  +S   N +  ++S   S 
Sbjct: 237 RSKGRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSR 296

Query: 128 ---RDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK 161
              R  SP       +  V   P R T +  + + SK
Sbjct: 297 SQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSK 333



 Score = 31.6 bits (70), Expect = 0.87
 Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 3/127 (2%)

Query: 63  RERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQ 122
           + R+ ++R  +  R     R+    SRS S  SSRS S   SKS S  +S+ + + R   
Sbjct: 182 KPRTSHRRSYSGSRSRSRSRR---RSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRS 238

Query: 123 SLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYE 182
             + SR  S S   +   S    +     E E + + S+  + K     +      S  +
Sbjct: 239 KGRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQ 298

Query: 183 AGSTAPL 189
           + S +PL
Sbjct: 299 SRSNSPL 305



 Score = 28.1 bits (61), Expect = 9.6
 Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 25/122 (20%)

Query: 14  RERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDN- 72
           + R+  +S P  + G       HS SR           R K  Y    +R RS   ++N 
Sbjct: 242 KSRSKSKSKPKSDRG------SHSHSRS----------RSKDEYEKSRSRSRSRSPKENG 285

Query: 73  -----TFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKTS 127
                +  R     R +SP     S   S S  P+R+ S S  +S+ +++ R   S  +S
Sbjct: 286 KGDIKSKSRSRSQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSR---SRSSS 342

Query: 128 RD 129
           RD
Sbjct: 343 RD 344


>gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain
           containing A [Homo sapiens]
          Length = 312

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 8/111 (7%)

Query: 25  DESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKD 84
           DE   R    DH   R+  YRD+ D  RR        +R RSP +R  +  R SP  R++
Sbjct: 201 DEKLERVPSPDH---RRRSYRDL-DKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRE 256

Query: 85  SPHSRSGSSVSSRSYS---PERSKSYSFHQS-QHRNKERPVQSLKTSRDTS 131
              S+S     SRS       RSKS   H+S +HR+  +  +  K S   S
Sbjct: 257 RHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKS 307


>gi|62526045 zinc finger protein 638 [Homo sapiens]
          Length = 1978

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 63/219 (28%), Positives = 86/219 (39%), Gaps = 31/219 (14%)

Query: 3   SEGRYEYERIPRERA----PPRSHPSDESG-YRWTRDDHSASRQPEYRDMRDGFRRKSFY 57
           +EG  +    PR R+    P RS  S  S  +R +R       +P  R  R   R  S Y
Sbjct: 474 NEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRY 533

Query: 58  SSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSV--SSRSYSPERSKSYSFHQSQHR 115
            S  +R RSPY+  N F       R  SP   S  SV  S R  + E     S H ++  
Sbjct: 534 RSR-SRSRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEF- 591

Query: 116 NKER----------PVQSLKTSRDTSPS--------SGSAVSSSKVLDKPSRLTEKELAE 157
           NK++          P Q  KTS  T PS        S S +    +  K   L +  L+E
Sbjct: 592 NKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSE 651

Query: 158 AASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEE 196
              K  ++K   S +  L +      GS   L T+ PE+
Sbjct: 652 C--KQVSDK-AVSLQRKLRKEQSLHYGSVL-LITELPED 686


>gi|21626468 zinc finger protein 638 [Homo sapiens]
          Length = 1978

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 63/219 (28%), Positives = 86/219 (39%), Gaps = 31/219 (14%)

Query: 3   SEGRYEYERIPRERA----PPRSHPSDESG-YRWTRDDHSASRQPEYRDMRDGFRRKSFY 57
           +EG  +    PR R+    P RS  S  S  +R +R       +P  R  R   R  S Y
Sbjct: 474 NEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRY 533

Query: 58  SSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSV--SSRSYSPERSKSYSFHQSQHR 115
            S  +R RSPY+  N F       R  SP   S  SV  S R  + E     S H ++  
Sbjct: 534 RSR-SRSRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEF- 591

Query: 116 NKER----------PVQSLKTSRDTSPS--------SGSAVSSSKVLDKPSRLTEKELAE 157
           NK++          P Q  KTS  T PS        S S +    +  K   L +  L+E
Sbjct: 592 NKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSE 651

Query: 158 AASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEE 196
              K  ++K   S +  L +      GS   L T+ PE+
Sbjct: 652 C--KQVSDK-AVSLQRKLRKEQSLHYGSVL-LITELPED 686


>gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens]
          Length = 221

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 45/145 (31%), Positives = 58/145 (40%), Gaps = 12/145 (8%)

Query: 4   EGRYEYERIPRERAPPRSH-------PSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSF 56
           +GR    ++ R   PP SH       P    G  + R   S  R+   R  R   R +S 
Sbjct: 81  DGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRSPRRRRRSRS-RSRSRSRSR 139

Query: 57  YSSHYARERSPYKRDNTFFRESPVGRKDSPH-SRSGSSVSSRSYSPERSKSYSFHQSQHR 115
             S Y+R +S   R  T  R     +  S   S+S SS  SRS S  RS+S S       
Sbjct: 140 SRSRYSRSKS---RSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVS 196

Query: 116 NKERPVQSLKTSRDTSPSSGSAVSS 140
            +E   +S   S   SP    AVSS
Sbjct: 197 KRESKSRSRSKSPPKSPEEEGAVSS 221



 Score = 35.0 bits (79), Expect = 0.078
 Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 12/132 (9%)

Query: 59  SHYARERSPYKRDNTFFRESPVGRKD-SPHSRSGSSVSSRSYSPERSKS-YSFHQSQHRN 116
           SH++R   P +R    +     GR+  SP  R  S   SRS S  RS+S YS  +S+ R 
Sbjct: 98  SHHSRRGPPPRR----YGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRT 153

Query: 117 KERPVQSLKT-SRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNL 175
           + R   + K+ S   S S  S+VS S+     SR   +  + +    +  + +    S  
Sbjct: 154 RSRSRSTSKSRSARRSKSKSSSVSRSR-----SRSRSRSRSRSPPPVSKRESKSRSRSKS 208

Query: 176 PEISEYEAGSTA 187
           P  S  E G+ +
Sbjct: 209 PPKSPEEEGAVS 220


>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
          Length = 2426

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 50/176 (28%), Positives = 68/176 (38%), Gaps = 24/176 (13%)

Query: 3    SEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSA-SRQPEYRDM----------RDGF 51
            S  + + +R P+ R+  R      S  R  R    A SR P  R            R   
Sbjct: 1885 SVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVG 1944

Query: 52   RRKSFYSSHYARERSPYKRDNTFFRES--PVGRKDSPHSRSGS--------SVSSRSYSP 101
            RR+SF  S   R R+P +R  T  R S  P  R  +P  RS +        S   RS S 
Sbjct: 1945 RRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSV 2004

Query: 102  ERSKSYSFHQSQHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAE 157
             R +S+S    + R    P   L+     SP       SS+    P RLT+ + A+
Sbjct: 2005 VRRRSFSISPVRLRRSRTP---LRRRFSRSPIRRKRSRSSERGRSPKRLTDLDKAQ 2057



 Score = 36.6 bits (83), Expect = 0.027
 Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 33   RDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYK---RDNTFFRESPVGRKDSPHSR 89
            RD    SR    +      R+++  S   AR+RS      R  T  R     R+ S  SR
Sbjct: 1818 RDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSR 1877

Query: 90   SGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSR 149
            S S    RS S E+ K    H+S+ R ++R   S + +R T  +     S       PSR
Sbjct: 1878 SKSR-GRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSR 1936



 Score = 35.0 bits (79), Expect = 0.078
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 5/97 (5%)

Query: 69   KRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKTSR 128
            KRD++  R      K S H     +  SRS + +RS     H+SQ R++ R  +  ++SR
Sbjct: 1817 KRDSSL-RSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSR 1875

Query: 129  DTSPSSG-SAVSSSKVLDKP---SRLTEKELAEAASK 161
              S S G  +VS  K    P   S+  E++   ++S+
Sbjct: 1876 SRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSR 1912


>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
          Length = 2303

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 50/176 (28%), Positives = 68/176 (38%), Gaps = 24/176 (13%)

Query: 3    SEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSA-SRQPEYRDM----------RDGF 51
            S  + + +R P+ R+  R      S  R  R    A SR P  R            R   
Sbjct: 1885 SVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVG 1944

Query: 52   RRKSFYSSHYARERSPYKRDNTFFRES--PVGRKDSPHSRSGS--------SVSSRSYSP 101
            RR+SF  S   R R+P +R  T  R S  P  R  +P  RS +        S   RS S 
Sbjct: 1945 RRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSV 2004

Query: 102  ERSKSYSFHQSQHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAE 157
             R +S+S    + R    P   L+     SP       SS+    P RLT+ + A+
Sbjct: 2005 VRRRSFSISPVRLRRSRTP---LRRRFSRSPIRRKRSRSSERGRSPKRLTDLDKAQ 2057



 Score = 36.6 bits (83), Expect = 0.027
 Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 33   RDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYK---RDNTFFRESPVGRKDSPHSR 89
            RD    SR    +      R+++  S   AR+RS      R  T  R     R+ S  SR
Sbjct: 1818 RDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSR 1877

Query: 90   SGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSR 149
            S S    RS S E+ K    H+S+ R ++R   S + +R T  +     S       PSR
Sbjct: 1878 SKSR-GRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSR 1936



 Score = 35.0 bits (79), Expect = 0.078
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 5/97 (5%)

Query: 69   KRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKTSR 128
            KRD++  R      K S H     +  SRS + +RS     H+SQ R++ R  +  ++SR
Sbjct: 1817 KRDSSL-RSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSR 1875

Query: 129  DTSPSSG-SAVSSSKVLDKP---SRLTEKELAEAASK 161
              S S G  +VS  K    P   S+  E++   ++S+
Sbjct: 1876 SRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSR 1912


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.125    0.353 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,931,025
Number of Sequences: 37866
Number of extensions: 548121
Number of successful extensions: 3109
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 233
Number of HSP's that attempted gapping in prelim test: 2303
Number of HSP's gapped (non-prelim): 753
length of query: 293
length of database: 18,247,518
effective HSP length: 101
effective length of query: 192
effective length of database: 14,423,052
effective search space: 2769225984
effective search space used: 2769225984
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.