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Search of human proteins with 218505711
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|218505711 small acidic protein isoform b [Homo sapiens]
(139 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|218505711 small acidic protein isoform b [Homo sapiens] 288 1e-78
gi|7657234 small acidic protein isoform a [Homo sapiens] 288 1e-78
gi|4504487 histidine rich calcium binding protein precursor [Hom... 49 2e-06
gi|16445033 ACRC protein [Homo sapiens] 47 7e-06
gi|55956788 nucleolin [Homo sapiens] 45 2e-05
gi|115529449 upstream binding transcription factor, RNA polymera... 45 2e-05
gi|115529451 upstream binding transcription factor, RNA polymera... 45 2e-05
gi|7657671 upstream binding transcription factor, RNA polymerase... 45 2e-05
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 45 2e-05
gi|42740903 MTERF domain containing 2 [Homo sapiens] 44 4e-05
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 44 4e-05
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 44 4e-05
gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens] 44 6e-05
gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens] 44 6e-05
gi|24429572 TBP-associated factor RNA polymerase 1-like [Homo sa... 44 6e-05
gi|55769587 probable nucleolar complex protein 14 [Homo sapiens] 43 7e-05
gi|40353734 nucleophosmin 1 isoform 2 [Homo sapiens] 42 1e-04
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 42 1e-04
gi|17975763 myelin transcription factor 1 [Homo sapiens] 42 2e-04
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 42 2e-04
gi|215422388 death-domain associated protein isoform a [Homo sap... 42 2e-04
gi|215422366 death-domain associated protein isoform b [Homo sap... 42 2e-04
gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homo... 42 2e-04
gi|4557509 cylicin 2 [Homo sapiens] 41 3e-04
gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens] 41 3e-04
gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens] 41 3e-04
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 41 3e-04
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 41 4e-04
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 41 4e-04
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 41 4e-04
>gi|218505711 small acidic protein isoform b [Homo sapiens]
Length = 139
Score = 288 bits (736), Expect = 1e-78
Identities = 139/139 (100%), Positives = 139/139 (100%)
Query: 1 MGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGF 60
MGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGF
Sbjct: 1 MGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGF 60
Query: 61 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 120
SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK
Sbjct: 61 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 120
Query: 121 NKKDAKSNYKMMFVKSSGS 139
NKKDAKSNYKMMFVKSSGS
Sbjct: 121 NKKDAKSNYKMMFVKSSGS 139
>gi|7657234 small acidic protein isoform a [Homo sapiens]
Length = 183
Score = 288 bits (736), Expect = 1e-78
Identities = 139/139 (100%), Positives = 139/139 (100%)
Query: 1 MGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGF 60
MGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGF
Sbjct: 45 MGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGF 104
Query: 61 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 120
SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK
Sbjct: 105 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 164
Query: 121 NKKDAKSNYKMMFVKSSGS 139
NKKDAKSNYKMMFVKSSGS
Sbjct: 165 NKKDAKSNYKMMFVKSSGS 183
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 48.5 bits (114), Expect = 2e-06
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 7/112 (6%)
Query: 26 GEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVED-------HDGEGDVAGDDDD 78
GE+D+ EE E + ++ ++ + RH G G E ED H G ++D
Sbjct: 187 GEDDEGEEEEEEEEEEEEASTEYGHQAHRHRGHGSEEDEDVSDGHHHHGPSHRHQGHEED 246
Query: 79 DDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYK 130
DDDD D + DD + E + + E ++V D + +D ++
Sbjct: 247 DDDDDDDDDDDDDDDVSIEYRHQAHRHQGHGIEEDEDVSDGHHHRDPSHRHR 298
Score = 37.4 bits (85), Expect = 0.004
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 18 KSTSHFRT--GEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGD 75
K SH R EE+K+ E+ +++ +S G H G E E+ + EG
Sbjct: 472 KDRSHLRKDDSEEEKEKEED-PGSHEEDDESSEQGEKGTHHGSRDQEDEEDEEEGHGLSL 530
Query: 76 DDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 124
+ +++++ E ++ E + + E+ E E+ A PD E+ + +++
Sbjct: 531 NQEEEEE----EDKEEEEEEEDEERREERAEVGAPLSPDHSEEEEEEEE 575
Score = 35.0 bits (79), Expect = 0.020
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 12/116 (10%)
Query: 17 HKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYR--RHCGLGFSEVED-HDG----- 68
H SH G E+ +++ + D + R++ RH G G E ED DG
Sbjct: 233 HHGPSHRHQGHEEDDDDDDDDDDDDDDDDVSIEYRHQAHRHQGHGIEEDEDVSDGHHHRD 292
Query: 69 --EGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNK 122
+ ++DD+DDD E + + KEE E + EH V D +++
Sbjct: 293 PSHRHRSHEEDDNDDDDVSTEYGHQAHRHQDHRKEE--VEAVSGEHHHHVPDHRHQ 346
Score = 29.6 bits (65), Expect = 0.83
Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 13/120 (10%)
Query: 17 HKSTSHFRTGEEDKKINEELESQYQQSMDSK------LSGRYRRHCGLGFSEVEDHDGEG 70
H+ SH +D ++ E Q + D + +SG + H V DH +G
Sbjct: 295 HRHRSHEEDDNDDDDVSTEYGHQAHRHQDHRKEEVEAVSGEHHHH-------VPDHRHQG 347
Query: 71 DVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYK 130
++D+D + P E+EE E H P+ K + +++
Sbjct: 348 HRDEEEDEDVSTERWHQGPQHVHHGLVDEEEEEEEITVQFGHYVASHQPRGHKSDEEDFQ 407
Score = 29.6 bits (65), Expect = 0.83
Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 23/121 (19%)
Query: 27 EEDKKINEELESQ---YQQSMDSKLSGRYRR--------------------HCGLGFSEV 63
EED++++ EL Q ++QS + +G +R H SE
Sbjct: 425 EEDEEVSAELGHQAPSHRQSHQDEETGHGQRGSIKEMSHHPPGHTVVKDRSHLRKDDSEE 484
Query: 64 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 123
E E + ++DD+ + + + S + E EE L + +E ED + ++
Sbjct: 485 EKEKEEDPGSHEEDDESSEQGEKGTHHGSRDQEDEEDEEEGHGLSLNQEEEEEEDKEEEE 544
Query: 124 D 124
+
Sbjct: 545 E 545
>gi|16445033 ACRC protein [Homo sapiens]
Length = 691
Score = 46.6 bits (109), Expect = 7e-06
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 61 SEVEDHDGEGDVAGDDDDDDDDSPDP-----ESPDDSESDSESEKEESAEELQAAEHPDE 115
SE D + A DD DD ++PD E+PDDS DSE+ + S + + + D+
Sbjct: 242 SEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDD 301
Query: 116 VEDPKNKKD 124
E P +K D
Sbjct: 302 SEAPDDKSD 310
Score = 44.7 bits (104), Expect = 2e-05
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 64 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 123
+D D D + D D DD S D E+PDDS DSE+ + S + + D+ E P +
Sbjct: 220 DDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSS 279
Query: 124 D 124
D
Sbjct: 280 D 280
Score = 44.3 bits (103), Expect = 3e-05
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 64 EDHDGEGDVAGDDDDD----DDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDP 119
+D + DV D DD DD S D E+PDDS DSE+ + S + +E PD+ D
Sbjct: 226 DDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDD----SEAPDDSSDD 281
Query: 120 KNKKDAKSN 128
D S+
Sbjct: 282 SEASDDSSD 290
Score = 43.9 bits (102), Expect = 4e-05
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 72 VAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 124
V DDD+DDD+ D E PDD+ DSE+ + S + ++ D+ E P + D
Sbjct: 122 VISDDDNDDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSD 174
Score = 43.9 bits (102), Expect = 4e-05
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 63 VEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNK 122
+ D D + D D + DD+S D E+PDD+ DSE+ + S + ++ D+ E P +
Sbjct: 123 ISDDDNDDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDN 182
Query: 123 KD 124
D
Sbjct: 183 SD 184
Score = 42.7 bits (99), Expect = 9e-05
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 61 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 120
SE D + + A DD+ DD D PD S D S+ +S+ ++++++ ++ PD+ D
Sbjct: 166 SEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDD---SDVPDDKSDDS 222
Query: 121 NKKDAKSN 128
+ D S+
Sbjct: 223 DVPDDSSD 230
Score = 42.4 bits (98), Expect = 1e-04
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 64 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 123
+D D D + D D DD S D + PDDS DSE+ + S + + D+ E P +
Sbjct: 210 DDSDVPDDKSDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSS 269
Query: 124 D 124
D
Sbjct: 270 D 270
Score = 42.4 bits (98), Expect = 1e-04
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 61 SEVEDHDGEGDVAGDDDDDDDDSPDP-----ESPDDSESDSES------EKEESAEELQA 109
S+V D + A DD DD ++PD E+PDDS DSE+ + E S +
Sbjct: 232 SDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDD 291
Query: 110 AEHPDEVEDPKNKKDAKSN 128
+E D+ D D KS+
Sbjct: 292 SEASDDSSDDSEAPDDKSD 310
Score = 42.0 bits (97), Expect = 2e-04
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 64 EDHDGEGDVAGDDDDD----DDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDP 119
+D+ + +V D+ DD DD+S D E+PDD+ DSE+ + S + ++ D+ + P
Sbjct: 130 DDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDVP 189
Query: 120 KNKKDAKSN 128
+ D S+
Sbjct: 190 DDNSDDSSD 198
Score = 42.0 bits (97), Expect = 2e-04
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 61 SEVEDHDGEGDVAGDDDDDDDDSPDP-----ESPDDSESDSESEKEESAEELQAAEHPDE 115
SE D + A DD DD ++PD E+ DDS DSE+ + S + + D+
Sbjct: 252 SEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDDSEAPDDKSDD 311
Query: 116 VEDPKNKKD 124
+ P++K D
Sbjct: 312 SDVPEDKSD 320
Score = 40.8 bits (94), Expect = 4e-04
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDP-----ESPDDSESDSESEKEESAEELQAAEHPDEV 116
EV D + + A DD+ DD ++PD E+PDD+ DSE+ + S + ++ D+
Sbjct: 137 EVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDS 196
Query: 117 EDPKNKKDAKSN 128
D + + N
Sbjct: 197 SDDNSDDSSDDN 208
Score = 40.4 bits (93), Expect = 5e-04
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 64 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 123
+D + D + D + DD S D E+PDD DS+ +++S + ++ D++E P +
Sbjct: 280 DDSEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNSDDLEVPVPAE 339
Query: 124 D 124
D
Sbjct: 340 D 340
Score = 40.0 bits (92), Expect = 6e-04
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 64 EDHDGEGDVAGDDDDDDDDSPDPES-----PDDSESDSESEKEESAEELQAAEHPDEVED 118
+ D D + DD+ DD D PD +S PDDS DS+ + S + + D+ E
Sbjct: 195 DSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEA 254
Query: 119 PKNKKD 124
P + D
Sbjct: 255 PDDSSD 260
Score = 39.3 bits (90), Expect = 0.001
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 61 SEVEDHDGEGDVAGDDDDDDDDSPDPES-----PDDSESDSESEKEESAEELQAAEHPDE 115
SE D + + A DD+ DD ++PD S PDD+ DS + + + + ++ D+
Sbjct: 156 SEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSD----DNSDD 211
Query: 116 VEDPKNKKD 124
+ P +K D
Sbjct: 212 SDVPDDKSD 220
Score = 38.9 bits (89), Expect = 0.001
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 64 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 123
+D + D + D + DD S D E+ DDS DSE+ ++S + + D+ + P +
Sbjct: 270 DDSEAPDDSSDDSEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNS 329
Query: 124 D 124
D
Sbjct: 330 D 330
Score = 38.5 bits (88), Expect = 0.002
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 61 SEVEDHDGEGDVAGDDDDDD-----DDSPDPESPDDSESDSE--SEKEESAEELQAAEHP 113
SE D + + A DD+ DD D+S D E+PDD+ DS+ + + + + + +
Sbjct: 146 SEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSS 205
Query: 114 DEVEDPKNKKDAKSN 128
D+ D + D KS+
Sbjct: 206 DDNSDDSDVPDDKSD 220
Score = 37.4 bits (85), Expect = 0.004
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 61 SEVEDHDGEGDVAGDDDDD--DDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVED 118
S+V D D D + D+ DD DD+S D + PDD DS+ + S + + D+ E
Sbjct: 186 SDVPD-DNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSDDSDVPDDSSDDSEA 244
Query: 119 PKNKKD 124
P + D
Sbjct: 245 PDDSSD 250
Score = 36.6 bits (83), Expect = 0.007
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 64 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 123
+D+ + DV D+ DD D +S DD+ DS+ ++S + ++ PD+ D +
Sbjct: 180 DDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDD----SDVPDDSSDDSDVP 235
Query: 124 DAKSN 128
D S+
Sbjct: 236 DDSSD 240
Score = 29.6 bits (65), Expect = 0.83
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 64 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVED 118
ED + DV DD+ DD + P P +E S++EE E A D +D
Sbjct: 316 EDKSDDSDVP-DDNSDDLEVPVPAEDLCNEGQIASDEEELVEAAAAVSQHDSSDD 369
Score = 28.9 bits (63), Expect = 1.4
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 15/79 (18%)
Query: 64 EDHDGEGDVAGDDDD---------DDDDSPDPESPDDSE------SDSESEKEESAEELQ 108
ED EG +A D+++ D S D D E SD E+ E S +L
Sbjct: 339 EDLCNEGQIASDEEELVEAAAAVSQHDSSDDAGEQDLGENLSKPPSDPEANPEVSERKLP 398
Query: 109 AAEHPDEVEDPKNKKDAKS 127
E P V + K+ +K+
Sbjct: 399 TEEEPAPVVEQSGKRKSKT 417
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 45.1 bits (105), Expect = 2e-05
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 64 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNK 122
ED D E D +DDDDD+D D DD E D E E+EE E ++ A + E K K
Sbjct: 234 EDEDEEEDDEDEDDDDDEDDED----DDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQK 288
Score = 40.4 bits (93), Expect = 5e-04
Identities = 24/98 (24%), Positives = 42/98 (42%)
Query: 27 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDP 86
++D + +EE + + D + SE ED + + D DDDD++DDS +
Sbjct: 150 DDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEE 209
Query: 87 ESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 124
++ K + AE DE ED +++ D
Sbjct: 210 AMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDD 247
Score = 39.7 bits (91), Expect = 8e-04
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 62 EVEDHDGEGDVAGDDDDDDDD-----------SPDPESPD-DSESDSESEKEESAEELQA 109
E ED D E D D+D+D+D+ + P S D D E D + E ++ EE +
Sbjct: 147 EEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDS 206
Query: 110 AEHPDEVEDPKNKKDAK 126
E E K KK AK
Sbjct: 207 EEEAMETTPAKGKKAAK 223
Score = 39.7 bits (91), Expect = 8e-04
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 71 DVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAK 126
+VA D+D+++DD + + D+ + D + E +E EE + E E + K+ AK
Sbjct: 231 NVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAK 286
Score = 35.0 bits (79), Expect = 0.020
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 67 DGEGDVAGDDDDDD-DDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 124
+G+ D D+++ DDS + E D+ E + E E E +A + AA E ED ++ +D
Sbjct: 136 NGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDED 194
Score = 33.5 bits (75), Expect = 0.057
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 8/45 (17%)
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEE 106
E +D D + D DD+DDDD +D E + E E+EE +E
Sbjct: 239 EEDDEDEDDDDDEDDEDDDD--------EDDEEEEEEEEEEPVKE 275
Score = 33.5 bits (75), Expect = 0.057
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAE 111
E ED D + D DDD+DD++ + E + + K+E A++ A E
Sbjct: 243 EDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPE 292
Score = 26.6 bits (57), Expect = 7.0
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 84 PDPESPDDSESDSESEKEESAEELQAAEHPDEVEDP--KNKKDAKSNYKMMFV 134
P +P E + +SE EE +E+ + +EV P K KK A ++ K + V
Sbjct: 14 PKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVV 66
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 45.1 bits (105), Expect = 2e-05
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 28 EDKKINEELESQYQQSMDSKLSG---RYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSP 84
+D+ +E S ++SM +KL G + R SE E+ D E + D+D++++D
Sbjct: 603 QDRAAYKEYISNKRKSM-TKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDE 661
Query: 85 DPESPDD----SESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKSSG 138
+ +S +D SES SE E E+ E + E D+ ED +D +S SSG
Sbjct: 662 NGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSG 719
Score = 38.1 bits (87), Expect = 0.002
Identities = 24/72 (33%), Positives = 32/72 (44%)
Query: 27 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDP 86
+ED + +E E + S+ G SE D + E D DDD+DDD+ D
Sbjct: 647 DEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDN 706
Query: 87 ESPDDSESDSES 98
ES S S S S
Sbjct: 707 ESEGSSSSSSSS 718
Score = 36.6 bits (83), Expect = 0.007
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 18 KSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDD 77
KS S E++ +E+ E + ++ DS G E ED D + D+D
Sbjct: 637 KSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESS-SEDESEDGDENEEDDEDED 695
Query: 78 DDDDDSPDPESPDDSESDSESEKEESAE 105
DD+DD D ++ + S S S +S++
Sbjct: 696 DDEDDDEDEDNESEGSSSSSSSSGDSSD 723
Score = 30.8 bits (68), Expect = 0.37
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 62 EVEDHDGEGDVAGDD------DDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDE 115
E +D +G+ G D +D+ +D + E D+ E D E + E+ E + +
Sbjct: 657 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 716
Query: 116 VEDPKNKKDA 125
+ D+
Sbjct: 717 SSGDSSDSDS 726
Score = 29.6 bits (65), Expect = 0.83
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 27 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDP 86
+E+++ +E +S S+ S G E E+ D + D DDD+D+D+ +
Sbjct: 654 DEEEEDDENGDSSEDGGDSSESSSEDESEDG---DENEEDDEDEDDDEDDDEDEDNESEG 710
Query: 87 ESPDDSESDSESEKEES 103
S S S S+ + +
Sbjct: 711 SSSSSSSSGDSSDSDSN 727
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 45.1 bits (105), Expect = 2e-05
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 28 EDKKINEELESQYQQSMDSKLSG---RYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSP 84
+D+ +E S ++SM +KL G + R SE E+ D E + D+D++++D
Sbjct: 603 QDRAAYKEYISNKRKSM-TKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDE 661
Query: 85 DPESPDD----SESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKSSG 138
+ +S +D SES SE E E+ E + E D+ ED +D +S SSG
Sbjct: 662 NGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSG 719
Score = 38.1 bits (87), Expect = 0.002
Identities = 24/72 (33%), Positives = 32/72 (44%)
Query: 27 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDP 86
+ED + +E E + S+ G SE D + E D DDD+DDD+ D
Sbjct: 647 DEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDN 706
Query: 87 ESPDDSESDSES 98
ES S S S S
Sbjct: 707 ESEGSSSSSSSS 718
Score = 36.6 bits (83), Expect = 0.007
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 18 KSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDD 77
KS S E++ +E+ E + ++ DS G E ED D + D+D
Sbjct: 637 KSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESS-SEDESEDGDENEEDDEDED 695
Query: 78 DDDDDSPDPESPDDSESDSESEKEESAE 105
DD+DD D ++ + S S S +S++
Sbjct: 696 DDEDDDEDEDNESEGSSSSSSSSGDSSD 723
Score = 30.8 bits (68), Expect = 0.37
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 62 EVEDHDGEGDVAGDD------DDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDE 115
E +D +G+ G D +D+ +D + E D+ E D E + E+ E + +
Sbjct: 657 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 716
Query: 116 VEDPKNKKDA 125
+ D+
Sbjct: 717 SSGDSSDSDS 726
Score = 29.6 bits (65), Expect = 0.83
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 27 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDP 86
+E+++ +E +S S+ S G E E+ D + D DDD+D+D+ +
Sbjct: 654 DEEEEDDENGDSSEDGGDSSESSSEDESEDG---DENEEDDEDEDDDEDDDEDEDNESEG 710
Query: 87 ESPDDSESDSESEKEES 103
S S S S+ + +
Sbjct: 711 SSSSSSSSGDSSDSDSN 727
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 45.1 bits (105), Expect = 2e-05
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 28 EDKKINEELESQYQQSMDSKLSG---RYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSP 84
+D+ +E S ++SM +KL G + R SE E+ D E + D+D++++D
Sbjct: 640 QDRAAYKEYISNKRKSM-TKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDE 698
Query: 85 DPESPDD----SESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKSSG 138
+ +S +D SES SE E E+ E + E D+ ED +D +S SSG
Sbjct: 699 NGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSG 756
Score = 38.1 bits (87), Expect = 0.002
Identities = 24/72 (33%), Positives = 32/72 (44%)
Query: 27 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDP 86
+ED + +E E + S+ G SE D + E D DDD+DDD+ D
Sbjct: 684 DEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDN 743
Query: 87 ESPDDSESDSES 98
ES S S S S
Sbjct: 744 ESEGSSSSSSSS 755
Score = 36.6 bits (83), Expect = 0.007
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 18 KSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDD 77
KS S E++ +E+ E + ++ DS G E ED D + D+D
Sbjct: 674 KSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESS-SEDESEDGDENEEDDEDED 732
Query: 78 DDDDDSPDPESPDDSESDSESEKEESAE 105
DD+DD D ++ + S S S +S++
Sbjct: 733 DDEDDDEDEDNESEGSSSSSSSSGDSSD 760
Score = 30.8 bits (68), Expect = 0.37
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 62 EVEDHDGEGDVAGDD------DDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDE 115
E +D +G+ G D +D+ +D + E D+ E D E + E+ E + +
Sbjct: 694 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 753
Query: 116 VEDPKNKKDA 125
+ D+
Sbjct: 754 SSGDSSDSDS 763
Score = 29.6 bits (65), Expect = 0.83
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 27 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDP 86
+E+++ +E +S S+ S G E E+ D + D DDD+D+D+ +
Sbjct: 691 DEEEEDDENGDSSEDGGDSSESSSEDESEDG---DENEEDDEDEDDDEDDDEDEDNESEG 747
Query: 87 ESPDDSESDSESEKEES 103
S S S S+ + +
Sbjct: 748 SSSSSSSSGDSSDSDSN 764
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 44.7 bits (104), Expect = 2e-05
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 30 KKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESP 89
++ +EE + S++S G + H ED + D DDDDDDDD D +
Sbjct: 228 QRTDEETTDNQEGSVESSEEGEDQEH--------EDDGEDEDDEDDDDDDDDDDDDDDED 279
Query: 90 DDSESDSESEKEE 102
D+ E D E E ++
Sbjct: 280 DEDEEDGEEENQK 292
Score = 41.6 bits (96), Expect = 2e-04
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQ 108
E ED + E D G+D+DD+DD D + DD + + + ++E+ EE Q
Sbjct: 247 EGEDQEHEDD--GEDEDDEDDDDDDDDDDDDDDEDDEDEEDGEEENQ 291
Score = 30.8 bits (68), Expect = 0.37
Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 69 EGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 123
E G+D + +DD D + DD + D + + ++ ++ E ++ E+ K+
Sbjct: 243 ESSEEGEDQEHEDDGEDEDDEDDDDDDDDDDDDDDEDD----EDEEDGEEENQKR 293
Score = 30.4 bits (67), Expect = 0.48
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 29 DKKINEELESQYQQSMDSKLSGRYRRHC--GLG-FSEVEDHDGEGDVAGDDDDDDDDSPD 85
DK I E+ Q+ D K R R LG F+E E+ + G D
Sbjct: 174 DKLITNTAEAVLQKMDDMKKMRRQRMRELEDLGVFNETEESNLNMYTRGKQKDI------ 227
Query: 86 PESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 124
+ D+ +D++ ES+EE + EH D+ ED ++ D
Sbjct: 228 -QRTDEETTDNQEGSVESSEEGEDQEHEDDGEDEDDEDD 265
>gi|42740903 MTERF domain containing 2 [Homo sapiens]
Length = 381
Score = 43.9 bits (102), Expect = 4e-05
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 25 TGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSP 84
T E+ ++ ++L ++ ++ +S S R E ED D E D DD+D+DDD
Sbjct: 308 TSVEEFQVFKKLLAREEEESESSTSDDKRA----SLDEDEDDDDEEDNDEDDNDEDDDDE 363
Query: 85 DPESPDDSESDSESEKEE 102
D + +D++ D + ++EE
Sbjct: 364 DDDEAEDNDEDEDDDEEE 381
Score = 39.3 bits (90), Expect = 0.001
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 64 EDHDGEGDVAGD-----DDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVE 117
E+ + E + D D+D+DDD + DD++ D + E ++ AE+ E DE E
Sbjct: 323 EEEESESSTSDDKRASLDEDEDDDDEEDNDEDDNDEDDDDEDDDEAEDNDEDEDDDEEE 381
Score = 33.1 bits (74), Expect = 0.075
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 61 SEVEDHDGEGDVAGDDDDDDD-DSPDPESPDDSESDSESEKEESAEE 106
S +D D DDDD++D D D + DD E D E+E + E+
Sbjct: 330 STSDDKRASLDEDEDDDDEEDNDEDDNDEDDDDEDDDEAEDNDEDED 376
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 43.9 bits (102), Expect = 4e-05
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 21/121 (17%)
Query: 26 GEEDKKINEELESQ-YQQSMDSKLSGRYRRHCGLGFSEVEDHDG----EGDVAGDDDDDD 80
G ED EE E + Y + D G + ED +G E ++ +D+DDD
Sbjct: 95 GTEDMDEKEEDEGEEYSEDNDEP-----------GDEDEEDEEGDREEEEEIEEEDEDDD 143
Query: 81 DDSPDPESPDDSESDSESEKEESAEE-----LQAAEHPDEVEDPKNKKDAKSNYKMMFVK 135
+D D E ++ E + E E+EE E + E N D NY + K
Sbjct: 144 EDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNNDEYDNYDELVAK 203
Query: 136 S 136
S
Sbjct: 204 S 204
Score = 27.7 bits (60), Expect = 3.1
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 78 DDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 124
D+ DDS E D+ E D E E +E + DE D + +++
Sbjct: 88 DECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEE 134
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 43.9 bits (102), Expect = 4e-05
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 61 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 120
+E E+ D E + DD+DD+ D ES +SESD+E +EE ++ E + E
Sbjct: 608 NEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKDQDESDSDTEG-- 665
Query: 121 NKKDAKSNYKMMFVKS 136
K K N VKS
Sbjct: 666 EKTSMKLNKTTSSVKS 681
Score = 41.2 bits (95), Expect = 3e-04
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 61 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 120
S + D D DD+++D++ + + DDS+S+S+S E E + + D+ +D
Sbjct: 600 SSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKDQDES 659
Query: 121 NKKDAKSNYKMMFVKSSGS 139
+ M K++ S
Sbjct: 660 DSDTEGEKTSMKLNKTTSS 678
Score = 40.8 bits (94), Expect = 4e-04
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 24 RTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDS 83
+TG+ D +L + Q + + GR RR G +D D + D GD+DD+D++
Sbjct: 1262 KTGKRDTSGGIDLGEE-QHPLGTPTPGRKRRRKGGDSDYDDDDDDDSDDQGDEDDEDEED 1320
Query: 84 PDP---ESPDDSESDSESEKEESAEELQ 108
+ + D E + E ++ S EEL+
Sbjct: 1321 KEDKKGKKTDICEDEDEGDQAASVEELE 1348
Score = 37.4 bits (85), Expect = 0.004
Identities = 15/66 (22%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 61 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAE-ELQAAEHPDEVEDP 119
S++ D D+++DD++ + + DD DS+SE + ++E + + +E D+ +
Sbjct: 596 SDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKD 655
Query: 120 KNKKDA 125
+++ D+
Sbjct: 656 QDESDS 661
Score = 33.1 bits (74), Expect = 0.075
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 80 DDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKS 127
D D P S DSE +E E+E+ EE + + DE +D +++ D+ S
Sbjct: 595 DSDIP---SSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNS 639
Score = 32.3 bits (72), Expect = 0.13
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 14 IGDHKSTSHFRTGEEDKKINEEL-ESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDG---- 68
+G KSTS +G ++K N+E ++Q + K+ + R + S D D
Sbjct: 197 MGQTKSTS---SGGGNRKCNQEQSKNQPLDARVDKIKDKKPRKKAMESSSNSDSDSGTSS 253
Query: 69 ----------EGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVED 118
+ D +D++++D S + DDS+S+SE++ + + + L + D
Sbjct: 254 DTSSEGISSSDSDDLEEDEEEEDQSIEESEDDDSDSESEAQHKSNNQVLLHG-----ISD 308
Query: 119 PK 120
PK
Sbjct: 309 PK 310
Score = 31.6 bits (70), Expect = 0.22
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 37 ESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDS-------PDPESP 89
+S S DS+ S E +D D E D + + D + +S D +
Sbjct: 595 DSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDK 654
Query: 90 DDSESDSESEKEESAEEL 107
D ESDS++E E+++ +L
Sbjct: 655 DQDESDSDTEGEKTSMKL 672
Score = 31.6 bits (70), Expect = 0.22
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 65 DHDGEGDVAGDDDDDD----DDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 120
D D +D ++D D+ D E +D ESD + +S E +E +D K
Sbjct: 595 DSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDK 654
Query: 121 NKKDAKSN 128
++ ++ S+
Sbjct: 655 DQDESDSD 662
>gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens]
Length = 259
Score = 43.5 bits (101), Expect = 6e-05
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 25 TGEEDKKINEELESQYQQSMDSKL-SGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDS 83
+G+ + E+ ES+ ++ D KL S +R G S+V + +A D+DDDDDD
Sbjct: 112 SGQHLVAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVK--LAADEDDDDDDE 169
Query: 84 PDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKSSG 138
D + DD + + E EE A ++ K+ ++ K + +S G
Sbjct: 170 EDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKG 224
>gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens]
Length = 294
Score = 43.5 bits (101), Expect = 6e-05
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 25 TGEEDKKINEELESQYQQSMDSKL-SGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDS 83
+G+ + E+ ES+ ++ D KL S +R G S+V + +A D+DDDDDD
Sbjct: 112 SGQHLVAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVK--LAADEDDDDDDE 169
Query: 84 PDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKSSG 138
D + DD + + E EE A ++ K+ ++ K + +S G
Sbjct: 170 EDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKG 224
>gi|24429572 TBP-associated factor RNA polymerase 1-like [Homo
sapiens]
Length = 1826
Score = 43.5 bits (101), Expect = 6e-05
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 59 GFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESA---------EELQA 109
G + + D + DV G DD+++D P P +P+ + D E+E + E+L
Sbjct: 1707 GQGRLGEEDSDVDVEGYDDEEEDGKPKPPAPEGGDGDLADEEEGTVQQPEASVLYEDLLI 1766
Query: 110 AEHPDEVEDPKNKKDAKSNYKMMFVKSSGS 139
+E D+ ED + ++ + + + + SGS
Sbjct: 1767 SEGEDDEEDAGSDEEGDNPFSAIQLSESGS 1796
>gi|55769587 probable nucleolar complex protein 14 [Homo sapiens]
Length = 857
Score = 43.1 bits (100), Expect = 7e-05
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 14/79 (17%)
Query: 28 EDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPE 87
+D K+N E + Q +QS ++ S+ E ++ EGD +G +D ++ DSPD
Sbjct: 334 KDGKMNVEEDVQEEQSKEA--------------SDPESNEEEGDSSGGEDTEESDSPDSH 379
Query: 88 SPDDSESDSESEKEESAEE 106
+S +SE E E+ A+E
Sbjct: 380 LDLESNVESEEENEKPAKE 398
>gi|40353734 nucleophosmin 1 isoform 2 [Homo sapiens]
Length = 265
Score = 42.4 bits (98), Expect = 1e-04
Identities = 26/103 (25%), Positives = 43/103 (41%)
Query: 25 TGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSP 84
+G+ + E+ ES+ ++ D KL + G A +DDDDDD+
Sbjct: 112 SGQHLVAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEED 171
Query: 85 DPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKS 127
D E DD + D E +E++ + + + PK K S
Sbjct: 172 DDEDDDDDDFDDEEAEEKAPVKKGQESFKKQEKTPKTPKGPSS 214
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 42.4 bits (98), Expect = 1e-04
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 5 KKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVE 64
+KE G + G+ + R EE++ EE E + ++ G G G E E
Sbjct: 807 EKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEE-----EGEGEEEEGEGKGEEE 861
Query: 65 DHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEE---SAEELQAAEHPDEVEDPKN 121
+GEG+ G++ + + + + E + E + E E+EE EE E +E + K
Sbjct: 862 GEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKG 921
Query: 122 KKDAK 126
+++ +
Sbjct: 922 EEEGE 926
Score = 41.2 bits (95), Expect = 3e-04
Identities = 25/112 (22%), Positives = 56/112 (50%), Gaps = 16/112 (14%)
Query: 26 GEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPD 85
GEE+ + EE E + ++ + ++ G EVE +GEG+ G++++ +++ +
Sbjct: 999 GEEEGEGEEEGEGEGEEEEEGEVEG-----------EVEGEEGEGE--GEEEEGEEEGEE 1045
Query: 86 PESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKSS 137
E + E + + +EE EE ++ + E+ ++D + K+ +K S
Sbjct: 1046 REKEGEGEENRRNREEEEEEE---GKYQETGEEENERQDGEEYKKVSKIKGS 1094
Score = 39.7 bits (91), Expect = 8e-04
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 2 GAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFS 61
G GK E G G+ + GE+ + EE E +++ G G G
Sbjct: 917 GEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWE--------GEEEEGEGEGEE 968
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEK--EESAEELQAAEHPDEVEDP 119
E E EG+ G++++ + + + E ++ E + E E+ E EE + E EVE
Sbjct: 969 EGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGE 1028
Query: 120 KNKKDAK 126
+ + + +
Sbjct: 1029 EGEGEGE 1035
Score = 37.7 bits (86), Expect = 0.003
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 18/117 (15%)
Query: 2 GAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFS 61
G GK E G G+ + GEE + EE E + + + G G
Sbjct: 854 GEGKGEEEGEEGEGEEE-------GEEGEGEGEEEEGEGEGEEE-----------GEGEG 895
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVED 118
E E+ +GEG+ G+ + ++++ + E + E E+EE E + E E E+
Sbjct: 896 EEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEE 952
Score = 30.4 bits (67), Expect = 0.48
Identities = 23/115 (20%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 24 RTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDS 83
R GEE ++ E Q +++ + + G E E +GE + +++++ +
Sbjct: 705 RDGEEQEQKEREQGHQKERNQEMEEGG-----------EEEHGEGEEEEGDREEEEEKEG 753
Query: 84 PDPESPDDSESDSESEKEE--------SAEELQAAEHPDEVEDPKNKKDAKSNYK 130
E + E + E EKEE + +E + E D+ E + + + + K
Sbjct: 754 EGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEK 808
Score = 29.3 bits (64), Expect = 1.1
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 23/123 (18%)
Query: 2 GAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFS 61
G GK+E G V G+ + R EE E+ E + Q G
Sbjct: 753 GEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQ----------------GEG 796
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN 121
E E+ +G G+ + ++ + E + E E E+EE E + E E E+ +
Sbjct: 797 EEEETEGRGE-------EKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEG 849
Query: 122 KKD 124
+++
Sbjct: 850 EEE 852
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 42.0 bits (97), Expect = 2e-04
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 42 QSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKE 101
QS++ S + G+ E ED + E + +++D++++ + E ++ E + E E+E
Sbjct: 238 QSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 297
Query: 102 ESAEELQAAEHPDEV 116
E EE + PD +
Sbjct: 298 EEEEEEEEEAAPDVI 312
Score = 39.7 bits (91), Expect = 8e-04
Identities = 16/62 (25%), Positives = 36/62 (58%)
Query: 64 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 123
E +G ++ +++D++++ + E +D E + E E+EE EE + E +E E+ + ++
Sbjct: 247 ESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 306
Query: 124 DA 125
A
Sbjct: 307 AA 308
Score = 26.9 bits (58), Expect = 5.4
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 75 DDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 124
+D ++ S E D E E+EE EE E +E E+ + +++
Sbjct: 241 EDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEE 290
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 41.6 bits (96), Expect = 2e-04
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 73 AGDDDDDDDDSPDPESPDDSESDSE---SEKEESAEELQAAEHPDEVEDPKNKKDA 125
A DD+DD++S + E ++ E + E SE+EE E++Q + DE ED + + A
Sbjct: 433 AETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAA 488
Score = 29.3 bits (64), Expect = 1.1
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 85 DPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSN 128
+ + DD ESD E E+EE EE + A +E ED + ++ + +
Sbjct: 434 ETDDEDDEESDEE-EEEEEEEEEEEATDSEEEEDLEQMQEGQED 476
Score = 27.3 bits (59), Expect = 4.1
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN 121
E E+ + E + A D ++++D E +D E E E+EE+A + P N
Sbjct: 447 EEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEE--EDEEEEAAAGKDGDKSPMSSLQISN 504
Query: 122 KKDAKSNYKMMFVKSSG 138
+K+ + ++ +SSG
Sbjct: 505 EKNLEPGKQIS--RSSG 519
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 41.6 bits (96), Expect = 2e-04
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 73 AGDDDDDDDDSPDPESPDDSESDSE---SEKEESAEELQAAEHPDEVEDPKNKKDA 125
A DD+DD++S + E ++ E + E SE+EE E++Q + DE ED + + A
Sbjct: 433 AETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAA 488
Score = 29.3 bits (64), Expect = 1.1
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 85 DPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSN 128
+ + DD ESD E E+EE EE + A +E ED + ++ + +
Sbjct: 434 ETDDEDDEESDEE-EEEEEEEEEEEATDSEEEEDLEQMQEGQED 476
Score = 27.3 bits (59), Expect = 4.1
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN 121
E E+ + E + A D ++++D E +D E E E+EE+A + P N
Sbjct: 447 EEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEE--EDEEEEAAAGKDGDKSPMSSLQISN 504
Query: 122 KKDAKSNYKMMFVKSSG 138
+K+ + ++ +SSG
Sbjct: 505 EKNLEPGKQIS--RSSG 519
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 41.6 bits (96), Expect = 2e-04
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 73 AGDDDDDDDDSPDPESPDDSESDSE---SEKEESAEELQAAEHPDEVEDPKNKKDA 125
A DD+DD++S + E ++ E + E SE+EE E++Q + DE ED + + A
Sbjct: 445 AETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAA 500
Score = 29.3 bits (64), Expect = 1.1
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 85 DPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSN 128
+ + DD ESD E E+EE EE + A +E ED + ++ + +
Sbjct: 446 ETDDEDDEESDEE-EEEEEEEEEEEATDSEEEEDLEQMQEGQED 488
Score = 27.3 bits (59), Expect = 4.1
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN 121
E E+ + E + A D ++++D E +D E E E+EE+A + P N
Sbjct: 459 EEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEE--EDEEEEAAAGKDGDKSPMSSLQISN 516
Query: 122 KKDAKSNYKMMFVKSSG 138
+K+ + ++ +SSG
Sbjct: 517 EKNLEPGKQIS--RSSG 531
>gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homolog
[Homo sapiens]
Length = 666
Score = 41.6 bits (96), Expect = 2e-04
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 27 EEDKKINEELESQYQQSMDSK---LSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDS 83
+EDK N + + + Q + D + LS R+ L E + D E VA D+DD+ +S
Sbjct: 172 DEDKLQNSDDDEKMQNTDDEERPQLSDDERQQ--LSEEEKANSDDERPVASDNDDEKQNS 229
Query: 84 PDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKS 127
D E P SD E + E QA++ D + ++D KS
Sbjct: 230 DDEEQP--QLSDEEKMQNSDDERPQASDEEHRHSDDEEEQDHKS 271
Score = 31.6 bits (70), Expect = 0.22
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 13/114 (11%)
Query: 26 GEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPD 85
G+ + N+EL DS+ G SE D+ E D +D+D D
Sbjct: 51 GDSGQPSNKELFGD-----DSEDEGASHHSGSDNHSERSDNRSEASERSDHEDNDPSDVD 105
Query: 86 PESPDDSESDSESEKEES--------AEELQAAEHPDEVEDPKNKKDAKSNYKM 131
S ++ +D E E S AE + A DE ++K D + K+
Sbjct: 106 QHSGSEAPNDDEDEGHRSDGGSHHSEAEGSEKAHSDDEKWGREDKSDQSDDEKI 159
Score = 28.9 bits (63), Expect = 1.4
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 71 DVAGDDDDDDDDSPDPESPDDSESDSE---SEKEESAEELQAAEHPDEVEDPKNKK 123
D+ G D D + + D +S DS+SD E S S E E D + P NK+
Sbjct: 6 DLFGSDADSEAERKDSDSGSDSDSDQENAASGSNASGSESDQDERGDSGQ-PSNKE 60
Score = 27.7 bits (60), Expect = 3.1
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 18/100 (18%)
Query: 28 EDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDD---DDDDDSP 84
+D+K N + E Q Q S + K+ ++ D E A D++ DD++
Sbjct: 223 DDEKQNSDDEEQPQLSDEEKM---------------QNSDDERPQASDEEHRHSDDEEEQ 267
Query: 85 DPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 124
D +S SDSE E + A + D + KD
Sbjct: 268 DHKSESARGSDSEDEVLRMKRKNAIASDSEADSDTEVPKD 307
Score = 27.7 bits (60), Expect = 3.1
Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 10/120 (8%)
Query: 16 DHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGD 75
DHKS S + ED E L + + ++ S S D G D
Sbjct: 268 DHKSESARGSDSED----EVLRMKRKNAIASDSEADSDTEVPKDNSGTMDLFGGADDISS 323
Query: 76 DDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVK 135
D +D P P P D + ++EE E EVE PK D ++ + FVK
Sbjct: 324 GSDGEDKPPTPGQPVDENGLPQDQQEEE----PIPETRIEVEIPKVNTDLGND--LYFVK 377
Score = 27.3 bits (59), Expect = 4.1
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 65 DHDGEGDVAGDDDDD--DDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNK 122
D D GD + + DDS D + S SD+ SE+ ++ E A+E D ++ +
Sbjct: 46 DQDERGDSGQPSNKELFGDDSEDEGASHHSGSDNHSERSDNRSE--ASERSDHEDNDPSD 103
Query: 123 KDAKS 127
D S
Sbjct: 104 VDQHS 108
Score = 27.3 bits (59), Expect = 4.1
Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Query: 3 AGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSE 62
+G H+ R D++S + R+ ED ++ + ++ + +R G SE
Sbjct: 75 SGSDNHSER---SDNRSEASERSDHEDNDPSDVDQHSGSEAPNDDEDEGHRSDGGSHHSE 131
Query: 63 VEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAE--ELQAAEHPDEVEDPK 120
E G DD+ D D E S+ EE A+ + ++ D+ E +
Sbjct: 132 AE-----GSEKAHSDDEKWGREDKSDQSDDEKIQNSDDEERAQGSDEDKLQNSDDDEKMQ 186
Query: 121 NKKD 124
N D
Sbjct: 187 NTDD 190
>gi|4557509 cylicin 2 [Homo sapiens]
Length = 348
Score = 41.2 bits (95), Expect = 3e-04
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 23/126 (18%)
Query: 19 STSHFRTGEEDKKINEELESQYQQSMDSKL-SGRYRRHCGLG-FSEVEDHDGEGDVAGDD 76
S S + G++D K +++E ++ +D+K S + ++ G S E D +G G
Sbjct: 130 SESELKQGKKDSKKGKDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATESEDEKG---GAK 186
Query: 77 DDDDDDSPDPESPDDSESDSESEK-----------------EESAEELQAAEHPDEVEDP 119
D+ D D DS ++SE EK ++SA ELQA + DE +D
Sbjct: 187 KDNKKDKKDSNKGKDSATESEGEKGGTEKDSKKGKKDSKKGKDSAIELQAVK-ADEKKDE 245
Query: 120 KNKKDA 125
KKDA
Sbjct: 246 DGKKDA 251
Score = 37.0 bits (84), Expect = 0.005
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 15/84 (17%)
Query: 62 EVEDHDGEGDVAGDDDDDD---------DDSPDPESPDDSESDS------ESEKEESAEE 106
E +D DG+ D D+ D D + P ++SDS ES+K+ + +
Sbjct: 241 EKKDEDGKKDANKGDESKDAKKDAKEIKKGKKDKKKPSSTDSDSKDDVKKESKKDATKDA 300
Query: 107 LQAAEHPDEVEDPKNKKDAKSNYK 130
+ A+ E E +KKDAK N K
Sbjct: 301 KKVAKKDTEKESADSKKDAKKNAK 324
Score = 30.0 bits (66), Expect = 0.63
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 77 DDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN--KKDAKSNYK 130
D D D ES D+ D++ ++ E+ A D ++ K KKDAK N K
Sbjct: 281 DSDSKDDVKKESKKDATKDAKKVAKKDTEKESADSKKDAKKNAKKDAKKDAKKNAK 336
Score = 26.6 bits (57), Expect = 7.0
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 65 DHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK--NK 122
D D + DV + D + D+E +S K+++ + + D ++ K K
Sbjct: 281 DSDSKDDVKKESKKDATKDAKKVAKKDTEKESADSKKDAKKNAKKDAKKDAKKNAKKDEK 340
Query: 123 KDAKSNYK 130
KDAK K
Sbjct: 341 KDAKKKGK 348
>gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens]
Length = 872
Score = 41.2 bits (95), Expect = 3e-04
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
Query: 26 GEEDKKIN---EELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDD-- 80
G+ ++K N E+ E Q DS + ++ G G E + D E + +
Sbjct: 296 GDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRK 355
Query: 81 ---DDSPDPESPDDSESDSES-----EKEESAEELQAAEHPDEVEDPKNKKDA 125
DDS D S +SES+SES EKEE+ E L+ E P E E K K A
Sbjct: 356 HSGDDSFDEGSVSESESESESGQAEEEKEEAEEALKEKEKPKEEEWEKPKDAA 408
Score = 33.5 bits (75), Expect = 0.057
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 27 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDD---DDDDDS 83
E D +I E+ E + Q + S + G G + E + D +D ++D +
Sbjct: 262 ENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSN 321
Query: 84 PDPESPDDSESDSESEKEESAEE 106
D + + D E +KE+S +E
Sbjct: 322 DDKTKKSEGDGDKEEKKEDSEKE 344
>gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens]
Length = 876
Score = 41.2 bits (95), Expect = 3e-04
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
Query: 26 GEEDKKIN---EELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDD-- 80
G+ ++K N E+ E Q DS + ++ G G E + D E + +
Sbjct: 296 GDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRK 355
Query: 81 ---DDSPDPESPDDSESDSES-----EKEESAEELQAAEHPDEVEDPKNKKDA 125
DDS D S +SES+SES EKEE+ E L+ E P E E K K A
Sbjct: 356 HSGDDSFDEGSVSESESESESGQAEEEKEEAEEALKEKEKPKEEEWEKPKDAA 408
Score = 33.5 bits (75), Expect = 0.057
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 27 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDD---DDDDDS 83
E D +I E+ E + Q + S + G G + E + D +D ++D +
Sbjct: 262 ENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSN 321
Query: 84 PDPESPDDSESDSESEKEESAEE 106
D + + D E +KE+S +E
Sbjct: 322 DDKTKKSEGDGDKEEKKEDSEKE 344
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 41.2 bits (95), Expect = 3e-04
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSE--SDSESEKEESAEELQAA 110
E+ + + E D DDD+DDDD D E DD + +DSE E+A E A
Sbjct: 1683 ELPEEEAEDDEDEDDDEDDDDEDDDEDDDDEDLRTDSEESLPEAAAEAAGA 1733
Score = 39.7 bits (91), Expect = 8e-04
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 59 GFSEVEDHDGEGDV----AGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAA 110
G S ED + E ++ A DD+D+DDD D + DD + D E + +S E L A
Sbjct: 1671 GESSQEDEEEELELPEEEAEDDEDEDDDEDDDDEDDDEDDDDEDLRTDSEESLPEA 1726
Score = 37.7 bits (86), Expect = 0.003
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQA 109
E+E + E + D+DDD+DD + + DD + D ++ EES E A
Sbjct: 1681 ELELPEEEAEDDEDEDDDEDDDDEDDDEDDDDEDLRTDSEESLPEAAA 1728
Score = 26.9 bits (58), Expect = 5.4
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 73 AGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVED 118
A + +D+ + E P++ D E E ++ ++ + + D+ ED
Sbjct: 1669 AAGESSQEDEEEELELPEEEAEDDEDEDDDEDDDDEDDDEDDDDED 1714
Score = 26.6 bits (57), Expect = 7.0
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 73 AGDDDDDDDDSPDPE--SPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 124
AGD D +P P + + + ES +E+ EEL+ E +E ED +++ D
Sbjct: 1646 AGDPGPPDAAAPGPREGAAAAAAAAGESSQEDEEEELELPE--EEAEDDEDEDD 1697
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 40.8 bits (94), Expect = 4e-04
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 67 DGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 123
DG G GD ++++++ + E ++ E E E+EE EE + E P ++ P+ ++
Sbjct: 850 DGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQ 906
Score = 37.7 bits (86), Expect = 0.003
Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 14/127 (11%)
Query: 2 GAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFS 61
G G+ E G+ G+ + G+ D + +E E + D ++ G
Sbjct: 781 GEGETETQGK---GEECEDENEAEGKGDNEGEDEGEIHAE---DGEMKGNE--------G 826
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN 121
E E + + G+ +D+ D D +S+ E E+EE EE + E +E E+ +
Sbjct: 827 ETESQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEE 886
Query: 122 KKDAKSN 128
+++ K N
Sbjct: 887 EEEEKGN 893
Score = 33.5 bits (75), Expect = 0.057
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 65 DHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDE 115
D G D G D D ++ + E + E + E ++EE EE + E +E
Sbjct: 844 DEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNE 894
Score = 31.6 bits (70), Expect = 0.22
Identities = 18/84 (21%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Query: 59 GFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDS------------ESEKEESAEE 106
G E E H +G++ G++ + + E+ ++++D +SE+EE EE
Sbjct: 808 GEDEGEIHAEDGEMKGNEGETESQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEE 867
Query: 107 LQAAEHPDEVEDPKNKKDAKSNYK 130
Q E +E ++ + +++ + K
Sbjct: 868 EQEEEEEEEEQEEEEEEEEEEEEK 891
Score = 26.6 bits (57), Expect = 7.0
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 69 EGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPD-EVED 118
EG+ AG+ + ++ + + + E++++ + EE +E +A D E ED
Sbjct: 760 EGETAGEGETEEKSGGETQPEGEGETETQGKGEECEDENEAEGKGDNEGED 810
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 40.8 bits (94), Expect = 4e-04
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 61 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 120
+E E+ E DV D++ ++D D E +D E + E E+EE EE + E + +D +
Sbjct: 198 TENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEE--EEEEYEQDER 255
Query: 121 NKKDAKSNY 129
++K+ ++Y
Sbjct: 256 DQKEEGNDY 264
Score = 36.6 bits (83), Expect = 0.007
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Query: 31 KINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPD 90
+++ Q S + S Y G S D G ++ ++D D E +
Sbjct: 158 EVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE 217
Query: 91 DSESDSE-----SEKEESAEELQAAEHPDEVEDPKNKKDAK 126
D+E D E E+EE EE + E +E E ++++D K
Sbjct: 218 DAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQK 258
Score = 33.9 bits (76), Expect = 0.044
Identities = 16/74 (21%), Positives = 34/74 (45%)
Query: 64 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 123
ED + E D D++ D+D + E ++ E + E E+EE ++ + + D +++
Sbjct: 211 EDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEA 270
Query: 124 DAKSNYKMMFVKSS 137
+ + F S
Sbjct: 271 SDSGSESVSFTDGS 284
Score = 30.0 bits (66), Expect = 0.63
Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 18/111 (16%)
Query: 4 GKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEV 63
G TG D + + T E++ + E++E + D++ E
Sbjct: 180 GSDHETGSSGSSDEQGNN---TENEEEGVEEDVEEDEEVEEDAEED------------EE 224
Query: 64 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPD 114
D DGE + ++++++++ + E ++ E D +KEE + +E D
Sbjct: 225 VDEDGEEE---EEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASD 272
Score = 28.9 bits (63), Expect = 1.4
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN 121
EVE+ D E D D+D ++++ E ++ E + E E+E +E E ++ +
Sbjct: 214 EVEE-DAEEDEEVDEDGEEEEE---EEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSE 269
Query: 122 KKDAKS 127
D+ S
Sbjct: 270 ASDSGS 275
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 40.8 bits (94), Expect = 4e-04
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 61 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 120
+E E+ E DV D++ ++D D E +D E + E E+EE EE + E + +D +
Sbjct: 198 TENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEE--EEEEYEQDER 255
Query: 121 NKKDAKSNY 129
++K+ ++Y
Sbjct: 256 DQKEEGNDY 264
Score = 36.6 bits (83), Expect = 0.007
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Query: 31 KINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPD 90
+++ Q S + S Y G S D G ++ ++D D E +
Sbjct: 158 EVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE 217
Query: 91 DSESDSE-----SEKEESAEELQAAEHPDEVEDPKNKKDAK 126
D+E D E E+EE EE + E +E E ++++D K
Sbjct: 218 DAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQK 258
Score = 33.9 bits (76), Expect = 0.044
Identities = 16/74 (21%), Positives = 34/74 (45%)
Query: 64 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 123
ED + E D D++ D+D + E ++ E + E E+EE ++ + + D +++
Sbjct: 211 EDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEA 270
Query: 124 DAKSNYKMMFVKSS 137
+ + F S
Sbjct: 271 SDSGSESVSFTDGS 284
Score = 30.0 bits (66), Expect = 0.63
Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 18/111 (16%)
Query: 4 GKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEV 63
G TG D + + T E++ + E++E + D++ E
Sbjct: 180 GSDHETGSSGSSDEQGNN---TENEEEGVEEDVEEDEEVEEDAEED------------EE 224
Query: 64 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPD 114
D DGE + ++++++++ + E ++ E D +KEE + +E D
Sbjct: 225 VDEDGEEE---EEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASD 272
Score = 28.9 bits (63), Expect = 1.4
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 62 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN 121
EVE+ D E D D+D ++++ E ++ E + E E+E +E E ++ +
Sbjct: 214 EVEE-DAEEDEEVDEDGEEEEE---EEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSE 269
Query: 122 KKDAKS 127
D+ S
Sbjct: 270 ASDSGS 275
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.300 0.124 0.342
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,246,926
Number of Sequences: 37866
Number of extensions: 325414
Number of successful extensions: 8560
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 282
Number of HSP's that attempted gapping in prelim test: 2833
Number of HSP's gapped (non-prelim): 3422
length of query: 139
length of database: 18,247,518
effective HSP length: 92
effective length of query: 47
effective length of database: 14,763,846
effective search space: 693900762
effective search space used: 693900762
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.