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Search of human proteins with 217272887
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|217272887 WD repeat domain 63 [Homo sapiens]
(891 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|217272887 WD repeat domain 63 [Homo sapiens] 1831 0.0
gi|217416452 dynein, axonemal, intermediate polypeptide 2 [Homo ... 108 3e-23
gi|4758178 dynein, cytoplasmic 1, intermediate chain 1 isoform a... 57 6e-08
gi|207113124 dynein, cytoplasmic 1, intermediate chain 1 isoform... 57 6e-08
gi|207113122 dynein, cytoplasmic 1, intermediate chain 1 isoform... 57 6e-08
gi|24307879 dynein, cytoplasmic 1, intermediate chain 2 [Homo sa... 55 3e-07
gi|66267730 WD repeat domain 34 [Homo sapiens] 44 5e-04
gi|46276887 WD repeat domain 78 isoform 1 [Homo sapiens] 38 0.048
gi|221219020 NYD-SP11 protein [Homo sapiens] 37 0.063
gi|155030242 WD repeat domain 60 [Homo sapiens] 37 0.063
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 37 0.063
gi|41872583 Rho-associated, coiled-coil containing protein kinas... 37 0.082
gi|41152097 DNA segment on chromosome X and Y (unique) 155 expre... 37 0.11
gi|109659847 filamin A interacting protein 1-like isoform 3 [Hom... 36 0.14
gi|109659845 filamin A interacting protein 1-like isoform 1 [Hom... 36 0.14
gi|6912338 dynein, axonemal, intermediate chain 1 [Homo sapiens] 36 0.14
gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo sap... 35 0.24
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens] 35 0.31
gi|5902034 periodic tryptophan protein 1 [Homo sapiens] 35 0.31
gi|76880486 activating signal cointegrator 1 complex subunit 3 i... 35 0.41
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 35 0.41
gi|238908495 similar to pleckstrin homology domain protein (5V32... 34 0.53
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 34 0.53
gi|93102364 SWAP-70 protein [Homo sapiens] 34 0.53
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 34 0.53
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens] 34 0.53
gi|224458301 family with sequence similarity 186, member A [Homo... 34 0.69
gi|23308722 TTK protein kinase [Homo sapiens] 34 0.69
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 34 0.69
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 34 0.69
>gi|217272887 WD repeat domain 63 [Homo sapiens]
Length = 891
Score = 1831 bits (4743), Expect = 0.0
Identities = 891/891 (100%), Positives = 891/891 (100%)
Query: 1 MAPKQKKKTSRGKKRLKPVLAASEDMEPVNMESMGHPEIYPLVLTTKTQEIFNCRIDEDV 60
MAPKQKKKTSRGKKRLKPVLAASEDMEPVNMESMGHPEIYPLVLTTKTQEIFNCRIDEDV
Sbjct: 1 MAPKQKKKTSRGKKRLKPVLAASEDMEPVNMESMGHPEIYPLVLTTKTQEIFNCRIDEDV 60
Query: 61 TDEQPYKLINKEDIFEDLRNRAAVSDFHPVKKIVQEYPGNELLLVYDKDFKYGLNFYLIA 120
TDEQPYKLINKEDIFEDLRNRAAVSDFHPVKKIVQEYPGNELLLVYDKDFKYGLNFYLIA
Sbjct: 61 TDEQPYKLINKEDIFEDLRNRAAVSDFHPVKKIVQEYPGNELLLVYDKDFKYGLNFYLIA 120
Query: 121 TEEGKENYLNPPEVPEEQEEYKEHIPEDVYIYKPPVSKPWVSLGSEKEIEEESVTESTKQ 180
TEEGKENYLNPPEVPEEQEEYKEHIPEDVYIYKPPVSKPWVSLGSEKEIEEESVTESTKQ
Sbjct: 121 TEEGKENYLNPPEVPEEQEEYKEHIPEDVYIYKPPVSKPWVSLGSEKEIEEESVTESTKQ 180
Query: 181 ITYMISRKRSEFGAPIKFSDQNASSVKDAYIECTAYPDKNFTLKQLEKDVGMQVIPQIKD 240
ITYMISRKRSEFGAPIKFSDQNASSVKDAYIECTAYPDKNFTLKQLEKDVGMQVIPQIKD
Sbjct: 181 ITYMISRKRSEFGAPIKFSDQNASSVKDAYIECTAYPDKNFTLKQLEKDVGMQVIPQIKD 240
Query: 241 ISTQTKWTYPKNATTQYYPREFSEEEKETLKQSKPLVDFLNNASISVEIALQQNEIMNTF 300
ISTQTKWTYPKNATTQYYPREFSEEEKETLKQSKPLVDFLNNASISVEIALQQNEIMNTF
Sbjct: 241 ISTQTKWTYPKNATTQYYPREFSEEEKETLKQSKPLVDFLNNASISVEIALQQNEIMNTF 300
Query: 301 IDDWKYLAEEEGTFGDKTDTHLKEYQSFTDLHSPTEKMITCVSWHPTIYGLIAVSVAVRL 360
IDDWKYLAEEEGTFGDKTDTHLKEYQSFTDLHSPTEKMITCVSWHPTIYGLIAVSVAVRL
Sbjct: 301 IDDWKYLAEEEGTFGDKTDTHLKEYQSFTDLHSPTEKMITCVSWHPTIYGLIAVSVAVRL 360
Query: 361 SFEDRVHFSGKLLLQPSLILFWSFSDPIHPQLMLESPDDIFCFKFCPSDPNIIAGGCING 420
SFEDRVHFSGKLLLQPSLILFWSFSDPIHPQLMLESPDDIFCFKFCPSDPNIIAGGCING
Sbjct: 361 SFEDRVHFSGKLLLQPSLILFWSFSDPIHPQLMLESPDDIFCFKFCPSDPNIIAGGCING 420
Query: 421 QIVMWDITAHADRIENIKAGGSRSKRATLKPMFLLEPESNKEAMYIRHCAVSSIENGHKK 480
QIVMWDITAHADRIENIKAGGSRSKRATLKPMFLLEPESNKEAMYIRHCAVSSIENGHKK
Sbjct: 421 QIVMWDITAHADRIENIKAGGSRSKRATLKPMFLLEPESNKEAMYIRHCAVSSIENGHKK 480
Query: 481 VITDIHWLSDTFEINRMGSVFENRSGICCQLVTCSADCTICFWDIRPQKPLTPQTTEKKK 540
VITDIHWLSDTFEINRMGSVFENRSGICCQLVTCSADCTICFWDIRPQKPLTPQTTEKKK
Sbjct: 481 VITDIHWLSDTFEINRMGSVFENRSGICCQLVTCSADCTICFWDIRPQKPLTPQTTEKKK 540
Query: 541 EESIEIPFDVPSTFLHLDLSWKPLTKVRLSKGETSLDHCPTKISLNEDHLLCKTQDKMLA 600
EESIEIPFDVPSTFLHLDLSWKPLTKVRLSKGETSLDHCPTKISLNEDHLLCKTQDKMLA
Sbjct: 541 EESIEIPFDVPSTFLHLDLSWKPLTKVRLSKGETSLDHCPTKISLNEDHLLCKTQDKMLA 600
Query: 601 QSKTEKAEEMNPYHNLESGMANLLKPIDDFCTKFFVGTEEGEVIYTDWKMEKDPETGRLM 660
QSKTEKAEEMNPYHNLESGMANLLKPIDDFCTKFFVGTEEGEVIYTDWKMEKDPETGRLM
Sbjct: 601 QSKTEKAEEMNPYHNLESGMANLLKPIDDFCTKFFVGTEEGEVIYTDWKMEKDPETGRLM 660
Query: 661 SKKPVSHHTIHDGTVHTIQRSPFYNDIILTVGGWNVAIWKEGVMTGPLLQSCCAPKRYTS 720
SKKPVSHHTIHDGTVHTIQRSPFYNDIILTVGGWNVAIWKEGVMTGPLLQSCCAPKRYTS
Sbjct: 661 SKKPVSHHTIHDGTVHTIQRSPFYNDIILTVGGWNVAIWKEGVMTGPLLQSCCAPKRYTS 720
Query: 721 GHWSLTRPGVFYIGREDGYIDIWDLLEKTHEPAQSQNICITMITYIKPWIFSSKQQFIAT 780
GHWSLTRPGVFYIGREDGYIDIWDLLEKTHEPAQSQNICITMITYIKPWIFSSKQQFIAT
Sbjct: 721 GHWSLTRPGVFYIGREDGYIDIWDLLEKTHEPAQSQNICITMITYIKPWIFSSKQQFIAT 780
Query: 781 ADYYGTLHILEIPWTLSRPSTNEMASVNHYFEREVKHLEYVEQRKKIREQEKKEMELEMA 840
ADYYGTLHILEIPWTLSRPSTNEMASVNHYFEREVKHLEYVEQRKKIREQEKKEMELEMA
Sbjct: 781 ADYYGTLHILEIPWTLSRPSTNEMASVNHYFEREVKHLEYVEQRKKIREQEKKEMELEMA 840
Query: 841 KKKVKTYQKSKEQMQAELKMDYESYLELEKTVLINLGLIKVTEKGSYMEVM 891
KKKVKTYQKSKEQMQAELKMDYESYLELEKTVLINLGLIKVTEKGSYMEVM
Sbjct: 841 KKKVKTYQKSKEQMQAELKMDYESYLELEKTVLINLGLIKVTEKGSYMEVM 891
>gi|217416452 dynein, axonemal, intermediate polypeptide 2 [Homo
sapiens]
Length = 605
Score = 108 bits (269), Expect = 3e-23
Identities = 76/233 (32%), Positives = 106/233 (45%), Gaps = 20/233 (8%)
Query: 632 TKFFVGTEEGEVIYTDWKMEKDPETGRLMSKKPVSHHTIHDGTVHTIQRSPFYNDIILTV 691
TKF VGTE+G VI + K + E K V H G ++ +QR+PFY LTV
Sbjct: 331 TKFMVGTEQGIVISCNRKAKTSAE-------KIVCTFPGHHGPIYALQRNPFYPKNFLTV 383
Query: 692 GGWNVAIWKEGVMTGPLLQSCCAPKRYTSGHWSLTRPGVFYIGREDGYIDIWDLLEKTHE 751
G W IW E ++ + T WS RP VF+ R DG +DIWD + + +
Sbjct: 384 GDWTARIWSEDSRESSIMWTKYHMAYLTDAAWSPVRPTVFFTTRMDGTLDIWDFMFEQCD 443
Query: 752 PAQSQNICITMITYIKPWIFSSKQQFIATADYYGTLHILEIPWTLSRPSTNEMASVNHYF 811
P S +C + ++ IA GT +LE+ LS NE + F
Sbjct: 444 PTLSLKVCDEALFCLR---VQDNGCLIACGSQLGTTTLLEVSPGLSTLQRNEKNVASSMF 500
Query: 812 EREVKHLEYVEQRKKIREQEKKEMELEMAKKKVKTYQKSKEQMQAELKMDYES 864
ERE + R+KI E +EM L K+K K + +EQ EL +D E+
Sbjct: 501 ERETR-------REKILEARHREMRL---KEKGKAEGRDEEQTDEELAVDLEA 543
Score = 67.4 bits (163), Expect = 6e-11
Identities = 84/400 (21%), Positives = 155/400 (38%), Gaps = 91/400 (22%)
Query: 180 QITYMISRKRSEFGAPIKFSDQNASSVKDAYIECTAYPDKNFTLKQLEK---DVGMQVIP 236
+I Y+ +KRSEFG FSD+ A + P+ + +E+ D G+Q
Sbjct: 2 EIVYVYVKKRSEFGKQCNFSDRQAE------LNIDIMPNPELAEQFVERNPVDTGIQCSI 55
Query: 237 QIKDISTQTKW----TYPKNATTQYYPREFSEEEKET-------LKQSKPLVDFLNNASI 285
+ + ++ T N +P++ + E E +++ + V+ +
Sbjct: 56 SMSEHEANSERFEMETRGVNHVEGGWPKDVNPLELEQTIRFRKKVEKDENYVNAIMQLGS 115
Query: 286 SVEIALQQNEIMNTFIDDWKYLAEEEGTFGDKTDTHLKEYQSFTDLHSPTEKMITCVSWH 345
+E ++QN ++ + + Y +EE + D K F D ++ T +SWH
Sbjct: 116 IMEHCIKQNNAIDIYEE---YFNDEEAMEVMEEDPSAKTINVFRDPQE-IKRAATHLSWH 171
Query: 346 PTIYGLIAVSVAVRLSFEDRVHFSGKLLLQPSLILFWSFSDPIHPQLMLESPDDIFCFKF 405
P +AV+ + + F + S W +P P+L L+ + +F
Sbjct: 172 PDGNRKLAVAYSC-------LDFQRAPVGMSSDSYIWDLENPNKPELALKPSSPLVTLEF 224
Query: 406 CPSDPNIIAGGCINGQIVMWDITAHADRIENIKAGGSRSKRATLKPMFLLEPESNKEAMY 465
P D +++ GGC NGQI WD T K + E
Sbjct: 225 NPKDSHVLLGGCYNGQIACWD---------------------TRKGSLVAE--------- 254
Query: 466 IRHCAVSSIENGHKKVITDIHWLSDTFEINRMGSVFENRSGICCQLVTCSADCTICFWDI 525
+S+IE+ H+ + WL ++++G C + S D + +WDI
Sbjct: 255 -----LSTIESSHRDPVYGTIWL-------------QSKTGTEC--FSASTDGQVMWWDI 294
Query: 526 R----PQKPLTPQTTEKKKEE------SIEIPFDVPSTFL 555
R P + + T+K++ E S+E +P+ F+
Sbjct: 295 RKMSEPTEVVILDITKKEQLENALGAISLEFESTLPTKFM 334
>gi|4758178 dynein, cytoplasmic 1, intermediate chain 1 isoform a
[Homo sapiens]
Length = 645
Score = 57.4 bits (137), Expect = 6e-08
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 21/199 (10%)
Query: 235 IPQIKDISTQTKWTYPKNATTQYYPREFSEEEKETLKQSKPLVDFLNNASISVEIALQQN 294
+ Q ++ Q K K A PRE +EEEK+ + S+ + F + +E AL ++
Sbjct: 193 VGQDSELENQDKKQEVKEAP----PRELTEEEKQQILHSEEFLIFFDRTIRVIERALAED 248
Query: 295 EIMNTFID-DWKYLAEEEGTFGDKTDTHLKEYQSFTDLHSPTEKMITCVSWHPTIYGLIA 353
+ F D + L E++G + +L + F D H +++TC+ W L+
Sbjct: 249 S--DIFFDYSGRELEEKDGDV--QAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYPELMV 304
Query: 354 VSVAVRLSFEDRVHFSGKLLLQPS-LILFWSFS-DPIHPQLMLESPDDIFCFKFCPSDPN 411
S + ED H +P + L W+ P+ + + F PN
Sbjct: 305 ASYN---NNEDAPH-------EPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPN 354
Query: 412 IIAGGCINGQIVMWDITAH 430
++ GG +GQIV+WD +H
Sbjct: 355 LVVGGTYSGQIVLWDNRSH 373
Score = 30.0 bits (66), Expect = 10.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 812 EREVKHLEYVEQRKKIREQEKKEMELEMAKKK 843
ER+ + L + + KK +E+E+K+ E +M +KK
Sbjct: 12 ERKKQRLAQIREEKKRKEEERKKKEADMQQKK 43
>gi|207113124 dynein, cytoplasmic 1, intermediate chain 1 isoform c
[Homo sapiens]
Length = 608
Score = 57.4 bits (137), Expect = 6e-08
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 21/199 (10%)
Query: 235 IPQIKDISTQTKWTYPKNATTQYYPREFSEEEKETLKQSKPLVDFLNNASISVEIALQQN 294
+ Q ++ Q K K A PRE +EEEK+ + S+ + F + +E AL ++
Sbjct: 156 VGQDSELENQDKKQEVKEAP----PRELTEEEKQQILHSEEFLIFFDRTIRVIERALAED 211
Query: 295 EIMNTFID-DWKYLAEEEGTFGDKTDTHLKEYQSFTDLHSPTEKMITCVSWHPTIYGLIA 353
+ F D + L E++G + +L + F D H +++TC+ W L+
Sbjct: 212 S--DIFFDYSGRELEEKDGDV--QAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYPELMV 267
Query: 354 VSVAVRLSFEDRVHFSGKLLLQPS-LILFWSFS-DPIHPQLMLESPDDIFCFKFCPSDPN 411
S + ED H +P + L W+ P+ + + F PN
Sbjct: 268 ASYN---NNEDAPH-------EPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPN 317
Query: 412 IIAGGCINGQIVMWDITAH 430
++ GG +GQIV+WD +H
Sbjct: 318 LVVGGTYSGQIVLWDNRSH 336
Score = 30.0 bits (66), Expect = 10.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 812 EREVKHLEYVEQRKKIREQEKKEMELEMAKKK 843
ER+ + L + + KK +E+E+K+ E +M +KK
Sbjct: 12 ERKKQRLAQIREEKKRKEEERKKKEADMQQKK 43
>gi|207113122 dynein, cytoplasmic 1, intermediate chain 1 isoform b
[Homo sapiens]
Length = 628
Score = 57.4 bits (137), Expect = 6e-08
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 21/199 (10%)
Query: 235 IPQIKDISTQTKWTYPKNATTQYYPREFSEEEKETLKQSKPLVDFLNNASISVEIALQQN 294
+ Q ++ Q K K A PRE +EEEK+ + S+ + F + +E AL ++
Sbjct: 176 VGQDSELENQDKKQEVKEAP----PRELTEEEKQQILHSEEFLIFFDRTIRVIERALAED 231
Query: 295 EIMNTFID-DWKYLAEEEGTFGDKTDTHLKEYQSFTDLHSPTEKMITCVSWHPTIYGLIA 353
+ F D + L E++G + +L + F D H +++TC+ W L+
Sbjct: 232 S--DIFFDYSGRELEEKDGDV--QAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYPELMV 287
Query: 354 VSVAVRLSFEDRVHFSGKLLLQPS-LILFWSFS-DPIHPQLMLESPDDIFCFKFCPSDPN 411
S + ED H +P + L W+ P+ + + F PN
Sbjct: 288 ASYN---NNEDAPH-------EPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPN 337
Query: 412 IIAGGCINGQIVMWDITAH 430
++ GG +GQIV+WD +H
Sbjct: 338 LVVGGTYSGQIVLWDNRSH 356
Score = 30.0 bits (66), Expect = 10.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 812 EREVKHLEYVEQRKKIREQEKKEMELEMAKKK 843
ER+ + L + + KK +E+E+K+ E +M +KK
Sbjct: 12 ERKKQRLAQIREEKKRKEEERKKKEADMQQKK 43
>gi|24307879 dynein, cytoplasmic 1, intermediate chain 2 [Homo
sapiens]
Length = 638
Score = 55.1 bits (131), Expect = 3e-07
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 259 PREFSEEEKETLKQSKPLVDFLNNASISVEIALQQNEIMNTFID-DWKYLAEEEGTFGDK 317
P E +EEEK+ + S+ + F ++++ VE AL +E +N F D + L ++EG +
Sbjct: 205 PHELTEEEKQQILHSEEFLSFFDHSTRIVERAL--SEQINIFFDYSGRDLEDKEGEI--Q 260
Query: 318 TDTHLKEYQSFTDLHSPTEKMITCVSWHPTIYGLIAVSVAVRLSFEDRVHFSGKLLLQPS 377
L + F D ++++C+ W L+ S + ED H +P
Sbjct: 261 AGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYN---NNEDAPH-------EPD 310
Query: 378 -LILFWSFS-DPIHPQLMLESPDDIFCFKFCPSDPNIIAGGCINGQIVMWD 426
+ L W+ P+ + + F PN++ GG +GQIV+WD
Sbjct: 311 GVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWD 361
Score = 36.2 bits (82), Expect = 0.14
Identities = 51/226 (22%), Positives = 84/226 (37%), Gaps = 15/226 (6%)
Query: 583 ISLNEDHLLCKTQDKMLAQSKTEKAEEMNPYHNLESGMA--NLLKPIDDFCTKFFVGTEE 640
IS++ D +C ML+ + + M H +A ++ P+ D F VG+EE
Sbjct: 399 ISISTDGKICSWSLDMLSHPQ----DSMELVHKQSKAVAVTSMSFPVGDV-NNFVVGSEE 453
Query: 641 GEVIYTDWKMEKDPETGRLMSKKPVSHHTIHDGTVHTIQRSPFYNDIILTVG-GWNVAIW 699
G V YT + + IH H + ++ + +T W V +W
Sbjct: 454 GSV-YTACRHGSKAGISEMFEGHQGPITGIH---CHAAVGAVDFSHLFVTSSFDWTVKLW 509
Query: 700 KEGVMTGPLLQSCCAPKRYTSGHWSLTRPGVFYIGREDGYIDIWDLLEKTHEPAQSQNIC 759
PL WS T P +F G +D+W+L T P S ++
Sbjct: 510 TTK-NNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASISVE 568
Query: 760 ITMITYIKPWIFSSKQQFIATADYYGTLHILEIPWTLSRPSTNEMA 805
W S ++ IA D G + I ++ ++ P +E A
Sbjct: 569 GNPALNRVRWTHSGRE--IAVGDSEGQIVIYDVGEQIAVPRNDEWA 612
>gi|66267730 WD repeat domain 34 [Homo sapiens]
Length = 536
Score = 44.3 bits (103), Expect = 5e-04
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 339 ITCVSWHPTIYGLIAVSVAVRLSFEDRVHFSGKLLLQPSLILFWSFSD----PIHPQLML 394
+T +SW+ T G + RL D S + W+ P P ++
Sbjct: 164 VTSISWNST--GSVVACAYGRLDHGDWSTLK-------SFVCAWNLDRRDLRPQQPSAVV 214
Query: 395 ESPDDIFCFKFCPSDPNIIAGGCINGQIVMWDITAHAD 432
E P + C F P+ P+ +AGG +G++++WD++ D
Sbjct: 215 EVPSAVLCLAFHPTQPSHVAGGLYSGEVLVWDLSRLED 252
Score = 40.0 bits (92), Expect = 0.010
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 22/142 (15%)
Query: 671 HDGTVHTIQRSPFYNDIILTVGGWNVAIWKEGVMTGPLLQSCCAPKRYTSGHWSLTRPGV 730
H G ++++ SPF+ ++ L+ G + PL + K + WS RP V
Sbjct: 391 HGGPIYSVSCSPFHRNLFLSAGTDGHVHLYSMLQAPPLTSLQLSLKYLFAVRWSPVRPLV 450
Query: 731 FYIGREDGYIDIWDLLEKTHEPA--------QSQNICITMITYIKPWIFSSKQ-QFIATA 781
F G + ++DL + + +P +S C+ F+S+Q Q +A
Sbjct: 451 FAAASGKGDVQLFDLQKSSQKPTVLIKQTQDESPVYCLE---------FNSQQTQLLAAG 501
Query: 782 DYYGTLHILEIPWTLSRPSTNE 803
D GT+ + W LS T +
Sbjct: 502 DAQGTVKV----WQLSTEFTEQ 519
>gi|46276887 WD repeat domain 78 isoform 1 [Homo sapiens]
Length = 848
Score = 37.7 bits (86), Expect = 0.048
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 339 ITCVSWHPTIYGLIAVSVAVRLSFEDRVHFSGKLLLQPSLILFWSFSDPIHPQLMLESPD 398
++ ++W+ T L+AV HF K + L WS +P+ P+ + +SP
Sbjct: 488 VSSLAWNKTNPDLLAVGYG---------HFGFKEQKR-GLACCWSIKNPMWPERIYQSPY 537
Query: 399 DIFCFKFCPSDPNIIAGGCINGQIVMWDITAHAD 432
+ F PN++A G NG I ++++ ++++
Sbjct: 538 GVTAVDFSIGAPNLLAVGYHNGTIAIYNVRSNSN 571
Score = 35.0 bits (79), Expect = 0.31
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 9/125 (7%)
Query: 671 HDGTVHTIQRSPFYNDIILTVGG-WNVAIWKEGVMTGPLLQSCCAPKRYTSGHWSLTRPG 729
H G V+ + +PF +D+ L+ W V IW++ + P L A WS
Sbjct: 703 HKGPVYKVTWNPFCHDVFLSCSADWGVIIWQQENVK-PSLSFYPATSVVYDVAWSPKSSY 761
Query: 730 VFYIGREDGYIDIWDLLEKTHEP--AQSQNICITMITYIKPWIFSSKQQFIATADYYGTL 787
+F E+ ++IWDL T +P + N I T +F+ + + D G +
Sbjct: 762 IFAAANEN-RVEIWDLHISTLDPLIVNTANPGIKFTTI----LFAKQTDCLLVGDSDGQV 816
Query: 788 HILEI 792
+ E+
Sbjct: 817 SVYEL 821
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 37.4 bits (85), Expect = 0.063
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 771 FSSKQQFIATADYYGT-----LHILEIPWTLSRPSTNEMASVNHYFEREVKHLEYVEQRK 825
FSS+ + + +++ L LE +LS E E EV+ E E+RK
Sbjct: 2213 FSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEE--EERK 2270
Query: 826 KIREQEKKEMELEMAKKKVKTYQKSKEQMQ--AELKMDYESYLELEKT 871
+ E E+K++E E +KK K +K KE++Q E+ + E + E+T
Sbjct: 2271 EEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEET 2318
>gi|155030242 WD repeat domain 60 [Homo sapiens]
Length = 1066
Score = 37.4 bits (85), Expect = 0.063
Identities = 30/93 (32%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
Query: 668 HTIHDGTVHTIQRSPFYNDIILTVGGWNVAIWKEGVMTGPLLQ--SCCAPKRYTSGHWSL 725
H I V+ I SPF I L + PLLQ S T WS
Sbjct: 905 HGIRPVKVNVIDFSPFGEPIFLAGCSDGSIRLHQLSSAFPLLQWDSSTDSHAVTGLQWSP 964
Query: 726 TRPGVFYIGREDGYIDIWDLLEKTHEPAQSQNI 758
TRP VF + + I IWDLL+ P Q +
Sbjct: 965 TRPAVFLVQDDTSNIYIWDLLQSDLGPVAKQQV 997
>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
Length = 4377
Score = 37.4 bits (85), Expect = 0.063
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 132 PEVPEEQE---EYKEHIPEDVYIYKPPVSKPWVSLGSEKEIEEESVTESTKQITYMISRK 188
PE P +E E+ P+ + Y P P + E E EE++ + S KQ T +
Sbjct: 3169 PETPSSEEVSYEFTSKTPDSLIAYIPGKPSPIPEVSEESEEEEQAKSTSLKQTTVEETAV 3228
Query: 189 RSEFGAPI-KFSDQNASSVKDAYIECTAYPDKNFTLKQLEKDVGMQVIPQ 237
E + K S+Q + + AYIE P Q+E D +P+
Sbjct: 3229 EREMPNDVSKDSNQRPKNNRVAYIEFP--PPPPLDADQIESDKKHHYLPE 3276
>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
[Homo sapiens]
Length = 1388
Score = 37.0 bits (84), Expect = 0.082
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 795 TLSRPSTNEMASVNHYFEREVKHLEYVEQRKKIREQEKKEMELEMAKKKVKT----YQKS 850
TL + N++A + + E VK + R+K +E K MEL+ ++K+ YQK
Sbjct: 1029 TLKTQAVNKLAEIMNRKE-PVKRGNDTDVRRKEKENRKLHMELKSEREKLTQQMIKYQKE 1087
Query: 851 KEQMQAELKMDYESYLELEKTV 872
+MQA++ + + +EL+ T+
Sbjct: 1088 LNEMQAQIAEESQIRIELQMTL 1109
>gi|41152097 DNA segment on chromosome X and Y (unique) 155
expressed sequence isoform 1 [Homo sapiens]
Length = 695
Score = 36.6 bits (83), Expect = 0.11
Identities = 19/63 (30%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 812 EREVKHLEYVEQRKKIREQEKKEMELEMAKKKVKTYQKSKEQMQAELKMDYESYLELEKT 871
ER+ K LE +E+ +K RE++ ++ E + ++++ QK E++QAE + + ++LE+
Sbjct: 303 ERKQKELEELERERK-REEKLRKREQKQRDRELRRNQKKLEKLQAEEQKQLQEKIKLEER 361
Query: 872 VLI 874
L+
Sbjct: 362 KLL 364
>gi|109659847 filamin A interacting protein 1-like isoform 3 [Homo
sapiens]
Length = 1133
Score = 36.2 bits (82), Expect = 0.14
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 63 EQPYKLINKEDIFEDLRNRAAVSDFHPVKKIVQEYPGNELLLVYDK---DFKYGLNFYLI 119
E Y + + + E L+ A + P ++ + E P NEL V +K ++ L L+
Sbjct: 104 EAQYGFVTPKKVLEALQRDAFQAKSTPWQEDIYEKPMNELDKVVEKHKESYRRILGQLLV 163
Query: 120 ATEEGKENYLNPPEVPEEQEEYKEHIPEDVYIYKPPVSKPWVSLGSEKEIEEESVTESTK 179
A + ++ L E + +EY E E + + + + + E + +EE E K
Sbjct: 164 AEKSRRQTILELEEEKRKHKEYMEKSDEFICLLEQECERLKKLIDQEIKSQEEKEQEKEK 223
Query: 180 QIT 182
++T
Sbjct: 224 RVT 226
>gi|109659845 filamin A interacting protein 1-like isoform 1 [Homo
sapiens]
Length = 1135
Score = 36.2 bits (82), Expect = 0.14
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 63 EQPYKLINKEDIFEDLRNRAAVSDFHPVKKIVQEYPGNELLLVYDK---DFKYGLNFYLI 119
E Y + + + E L+ A + P ++ + E P NEL V +K ++ L L+
Sbjct: 104 EAQYGFVTPKKVLEALQRDAFQAKSTPWQEDIYEKPMNELDKVVEKHKESYRRILGQLLV 163
Query: 120 ATEEGKENYLNPPEVPEEQEEYKEHIPEDVYIYKPPVSKPWVSLGSEKEIEEESVTESTK 179
A + ++ L E + +EY E E + + + + + E + +EE E K
Sbjct: 164 AEKSRRQTILELEEEKRKHKEYMEKSDEFICLLEQECERLKKLIDQEIKSQEEKEQEKEK 223
Query: 180 QIT 182
++T
Sbjct: 224 RVT 226
>gi|6912338 dynein, axonemal, intermediate chain 1 [Homo sapiens]
Length = 699
Score = 36.2 bits (82), Expect = 0.14
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 17/164 (10%)
Query: 597 KMLAQSKTEKAEEMNPYHNLESGMA-NLLKPIDDFCTKFFVGTEEGEVIYTDWKMEKDPE 655
K+ + T + E H + G A + K ID F VGTEEG++ +K K
Sbjct: 477 KLKVEGSTTEVPEGLQLHPVGCGTAFDFHKEIDYM---FLVGTEEGKI----YKCSKS-- 527
Query: 656 TGRLMSKKPVSHHTIHDGTVHTIQRSPFYNDIILTVGG-WNVAIWKEGVMTGPLLQSCCA 714
S + + + H+ +V T+ +P++ + ++ W V IW + T + +
Sbjct: 528 ----YSSQFLDTYDAHNMSVDTVSWNPYHTKVFMSCSSDWTVKIWDHTIKTPMFIYDLNS 583
Query: 715 PKRYTSGHWSLTRPGVFYIGREDGYIDIWDLLEKTHEPAQSQNI 758
+ W+ VF DG I+DL +E +Q +
Sbjct: 584 AVGDVA--WAPYSSTVFAAVTTDGKAHIFDLAINKYEAICNQPV 625
>gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo
sapiens]
Length = 373
Score = 35.4 bits (80), Expect = 0.24
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 814 EVKHLEYV----EQRKKIREQE-KKEMELEMAKKKVKTY--QKSKEQMQAELKMDYESYL 866
E KH E+V EQ++K REQ+ KEME + AK+ K Y +K+KE+ Q LK
Sbjct: 189 EEKHKEWVQKKNEQKRKEREQKINKEMEEKAAKELEKEYLQEKAKEKYQEWLKKKNAEEC 248
Query: 867 ELEK 870
E +K
Sbjct: 249 ERKK 252
>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
Length = 495
Score = 35.0 bits (79), Expect = 0.31
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 822 EQRKKIREQEKKEMELEMAKKKVKTYQKSKEQMQAELKMDYESYLELEKTVL 873
E +++R++ +E + E+ K K+K + K + Q E+K D+E + L++ VL
Sbjct: 314 EDLEQVRQELYQEEQAEIYKSKLKEEAEKKLRKQKEMKQDFEEQMALKELVL 365
>gi|5902034 periodic tryptophan protein 1 [Homo sapiens]
Length = 501
Score = 35.0 bits (79), Expect = 0.31
Identities = 58/246 (23%), Positives = 93/246 (37%), Gaps = 57/246 (23%)
Query: 306 YLAEEEGTFGDKTDTHLKEYQSFTDLHSPTEKMITCVSWHPTIYGLIAVSVAVRLSFEDR 365
Y + ++ + DT E + F L P++ +I C L V V ED
Sbjct: 121 YGSNDQDPYVTLKDTEQYEREDF--LIKPSDNLIVCGRAEQDQCNL---EVHVYNQEEDS 175
Query: 366 VHFSGKLLLQP-SLILFWSFSDPIHPQLMLESPDDIFCFKFCPSDPNIIAGGCINGQIVM 424
+ +LL L + W DP SPDD S N IA G + I +
Sbjct: 176 FYVHHDILLSAYPLSVEWLNFDP--------SPDD--------STGNYIAVGNMTPVIEV 219
Query: 425 WDITAHADRIENIKAGGSRSKRATLKPMFLLEPESNKEAMYIRHCAVSSIENGHKKVITD 484
WD+ D +++ L+P+F L + +K+ + SS GH + D
Sbjct: 220 WDL----DIVDS------------LEPVFTLGSKLSKKKK--KKGKKSSSAEGHTDAVLD 261
Query: 485 IHWLSDTFEINRMGSVFENRSGICCQLVTCSADCTICFWDIRPQKPLTPQTTEKKKEESI 544
+ W N++ I L + SAD T+ WD+ KP K +++
Sbjct: 262 LSW-------NKL---------IRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTL 305
Query: 545 EI-PFD 549
+ PF+
Sbjct: 306 QFHPFE 311
>gi|76880486 activating signal cointegrator 1 complex subunit 3
isoform a [Homo sapiens]
Length = 2202
Score = 34.7 bits (78), Expect = 0.41
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 540 KEESIEIPFDVPSTFLHLDLSWKPLTKVRLSKGETSLDHCPTKISL--NEDHLLCKTQDK 597
K+ S+ ++ + LHL WKP+ K ++G TS++ P I +DH+ +
Sbjct: 1957 KDSSLLTLPNIENHHLHLFKKWKPIMKGPHARGRTSIESLPELIHACGGKDHVFSSMVES 2016
Query: 598 MLAQSKTEKA 607
L +KT++A
Sbjct: 2017 ELHAAKTKQA 2026
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 34.7 bits (78), Expect = 0.41
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 798 RPSTNEMASVNHYFERE-VKHLEYVEQRKKIREQEK-------KEMELEMAKKKVKTYQK 849
+PS E+ ERE K LE +++++ +E+EK KE ELE ++K + +K
Sbjct: 498 QPSPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEK 557
Query: 850 S-KEQMQAELKMDYESYLELEK 870
K++ + EL+ E EL+K
Sbjct: 558 ERKQEKEKELERQKEKEKELQK 579
Score = 34.7 bits (78), Expect = 0.41
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 813 REVKHLEYVEQRKKIREQEK-----KEMELEMAKKKVKTYQKSKEQ-MQAELKMDYESYL 866
++ K E ++++K RE EK KE ELE K+K K QK KEQ + EL+ + E
Sbjct: 538 QQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKELQKMKEQEKECELEKEREKLE 597
Query: 867 E 867
E
Sbjct: 598 E 598
Score = 32.3 bits (72), Expect = 2.0
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 812 EREVKHLEYVEQRKKI-REQEK-KEMELEMAKKKVKTYQKSKEQMQAELKM-DYESYLEL 868
ERE E+ K++ +EQEK +EME E ++K K ++ KE+ + KM + E EL
Sbjct: 530 EREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKELQKMKEQEKECEL 589
Query: 869 EK 870
EK
Sbjct: 590 EK 591
Score = 32.0 bits (71), Expect = 2.6
Identities = 15/50 (30%), Positives = 31/50 (62%)
Query: 812 EREVKHLEYVEQRKKIREQEKKEMELEMAKKKVKTYQKSKEQMQAELKMD 861
+RE++ E+ K++ Q++KE EL+ K++ K + KE+ + E K++
Sbjct: 552 QREMEKERKQEKEKELERQKEKEKELQKMKEQEKECELEKEREKLEEKIE 601
>gi|238908495 similar to pleckstrin homology domain protein (5V327)
[Homo sapiens]
Length = 506
Score = 34.3 bits (77), Expect = 0.53
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 796 LSRPSTNEMASVNHYFEREVKHLEYVEQRKKI-REQEKKEMEL--------EMAKKKVKT 846
L R E+ +N E E + E V Q ++ +EQ K+E+EL E KK+++
Sbjct: 179 LQREQREELERLNQVLEAEKQQFEEVVQELRMEQEQIKRELELTARCLKGVEQEKKELRH 238
Query: 847 YQKSKEQMQAELKMDYESYLEL 868
+S +Q EL ++ + LE+
Sbjct: 239 LTESLQQTLEELSIEKKKTLEM 260
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 34.3 bits (77), Expect = 0.53
Identities = 22/80 (27%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 813 REVKHLEYVE-QRKKIREQ-EKKEMELEMAKKKVKTYQKSKEQMQAELKMDYESYLELEK 870
+ +LE++E + ++EQ E ELE+ K+K+ T +++ EQ E K+ ES ++ K
Sbjct: 988 QRTSNLEHLECENISLKEQVESINKELEITKEKLHTIEQAWEQ---ETKLGNESSMDKAK 1044
Query: 871 TVLINLGLIKVTEKGSYMEV 890
+ N ++ +++K + +E+
Sbjct: 1045 KSITNSDIVSISKKITMLEM 1064
>gi|93102364 SWAP-70 protein [Homo sapiens]
Length = 585
Score = 34.3 bits (77), Expect = 0.53
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 774 KQQFIATADYYGTLHILEIPWTLSRPSTNEMASVNHYFEREVKHLEYVEQRKKIRE---- 829
KQ++I + T+H+L+ L P ++ A R+ + E E ++++E
Sbjct: 294 KQEWIQAI--HSTIHLLK----LGSPPPHKEARQRRKELRKKQLAEQEELERQMKELQAA 347
Query: 830 QEKKEMELEMAKKKV-----KTYQKSKEQMQAELKMDYESYLELEKTVLINLGL-IKVTE 883
E K+ ELE +KK+ + ++ K+++Q ++++ ELE+ LI + +V +
Sbjct: 348 NESKQQELEAVRKKLEEAASRAAEEEKKRLQTQVELQARFSTELEREKLIRQQMEEQVAQ 407
Query: 884 KGSYME 889
K S +E
Sbjct: 408 KSSELE 413
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 34.3 bits (77), Expect = 0.53
Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 137 EQEEYKEHIPEDVYIYKPPVSKPWVSLGSEKEIEEESVTESTKQITYMISRKRSEFGA-P 195
E+ +E + ED+ + + + K EE V S KQ+ M ++ E G P
Sbjct: 62 EENILEEELNEDIKVKEEQL----------KNSAEEEVLSSEKQLIKMEKKEEEENGERP 111
Query: 196 IKFSDQNASSVKDAYIECTAYPDKN-FTLKQLEKDVGMQVIPQIKDISTQTKWTYPKNAT 254
K ++ K+ E +K T+ + P + T + P T
Sbjct: 112 RKKKEKEKEKEKEKEKEKEREKEKEKATVSENVAASAAATTPATSPPAVNTSPSVP--TT 169
Query: 255 TQYYPREFSEEEKETLKQSKPLVDFLNNASISVEIALQQNEIMNTFIDDW---------K 305
T + SE +K L++++PL+DF +S+E ++ + +DW +
Sbjct: 170 TTATEEQVSEPKKWNLRRNRPLLDF-----VSMEELNDMDDYDSEDDNDWRPTVVKRKGR 224
Query: 306 YLAEEEGTFGDKTD 319
+++EG+ GD D
Sbjct: 225 SASQKEGSDGDNED 238
>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
Length = 948
Score = 34.3 bits (77), Expect = 0.53
Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 137 EQEEYKEHIPEDVYIYKPPVSKPWVSLGSEKEIEEESVTESTKQITYMISRKRSEFGA-P 195
E+ +E + ED+ + + + K EE V S KQ+ M ++ E G P
Sbjct: 62 EENILEEELNEDIKVKEEQL----------KNSAEEEVLSSEKQLIKMEKKEEEENGERP 111
Query: 196 IKFSDQNASSVKDAYIECTAYPDKN-FTLKQLEKDVGMQVIPQIKDISTQTKWTYPKNAT 254
K ++ K+ E +K T+ + P + T + P T
Sbjct: 112 RKKKEKEKEKEKEKEKEKEREKEKEKATVSENVAASAAATTPATSPPAVNTSPSVP--TT 169
Query: 255 TQYYPREFSEEEKETLKQSKPLVDFLNNASISVEIALQQNEIMNTFIDDW---------K 305
T + SE +K L++++PL+DF +S+E ++ + +DW +
Sbjct: 170 TTATEEQVSEPKKWNLRRNRPLLDF-----VSMEELNDMDDYDSEDDNDWRPTVVKRKGR 224
Query: 306 YLAEEEGTFGDKTD 319
+++EG+ GD D
Sbjct: 225 SASQKEGSDGDNED 238
>gi|224458301 family with sequence similarity 186, member A [Homo
sapiens]
Length = 2351
Score = 33.9 bits (76), Expect = 0.69
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 8/62 (12%)
Query: 812 EREVKHLEYVEQRKKIREQEKKEMELEMAKKKVKTYQKSKEQMQAELKMDYESYLELEKT 871
++E KHL +R+K +E++K E LE ++++KT K+QMQ M ELEK
Sbjct: 950 QKEAKHLGPHRRREKGKEKQKPERGLEDLERQIKT----KDQMQ----MKETQPKELEKM 1001
Query: 872 VL 873
V+
Sbjct: 1002 VI 1003
>gi|23308722 TTK protein kinase [Homo sapiens]
Length = 857
Score = 33.9 bits (76), Expect = 0.69
Identities = 32/148 (21%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
Query: 77 DLRNRAAVSDFHPVKKIVQEYPGNELLLVYDKDFKYGLNFYLIATEEGKENYLNPPEVPE 136
+LRN +V + H + +V + +EL++ K L+A E + Y PEVPE
Sbjct: 323 ELRNLKSVQNSHFKEPLVSDEKSSELIITDSITLKNKTESSLLAKLEETKEY-QEPEVPE 381
Query: 137 EQEEYKEHIPEDVYIYKPPV--SKPWVSLGSEKEIEEESVTESTKQITYMISRK-----R 189
++ + + I + P S W +++ E + +Q + +S++
Sbjct: 382 SNQKQWQSKRKSECINQNPAASSNHWQIPELARKVNTEQKHTTFEQPVFSVSKQSPPIST 441
Query: 190 SEFGAPIKFSDQNASSVKDAYIECTAYP 217
S++ P +S+ D Y+ C P
Sbjct: 442 SKWFDPKSICKTPSSNTLDDYMSCFRTP 469
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 33.9 bits (76), Expect = 0.69
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 812 EREVKHLEYVEQRKKIREQEKKEMELEMAKKKVKTYQKSKEQMQAELKMDYESYLE 867
++E K L+ + + K RE+EK + E+E K+K KT +KE +Q ++ D E + E
Sbjct: 621 DKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKTKDSAKE-LQRSVEFDREFWKE 675
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 33.9 bits (76), Expect = 0.69
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 812 EREVKHLEYVEQRKKIREQEKKEMELEMAKKKVKTYQKSKEQMQAELKMDYESYLE 867
++E K L+ + + K RE+EK + E+E K+K KT +KE +Q ++ D E + E
Sbjct: 644 DKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKTKDSAKE-LQRSVEFDREFWKE 698
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,714,418
Number of Sequences: 37866
Number of extensions: 1707431
Number of successful extensions: 8850
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 7853
Number of HSP's gapped (non-prelim): 992
length of query: 891
length of database: 18,247,518
effective HSP length: 111
effective length of query: 780
effective length of database: 14,044,392
effective search space: 10954625760
effective search space used: 10954625760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.