Guide to the Human Genome
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Name: WDR63 Sequence: fasta or formatted (891aa) NCBI GI: 217272887
Description:

WD repeat domain 63

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         35           2
 C cysteine            2.0         18           2
 D aspartate           5.4         48           2
 E glutamate           9.9         88           3
 F phenylalanine       3.8         34           2
 G glycine             4.2         37           2
 H histidine           2.8         25           2
 I isoleucine          7.4         66           2
 K lysine              9.2         82           3
 L leucine             7.6         68           3
 M methionine          3.0         27           1
 N asparagine          3.6         32           2
 P proline             5.6         50           2
 Q glutamine           3.9         35           2
 R arginine            3.0         27           1
 S serine              7.0         62           2
 T threonine           6.8         61           2
 V valine              5.1         45           1
 W tryptophan          1.8         16           1
 Y tyrosine            3.9         35           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 63 
DNAI2                 0.046   dynein, axonemal, intermediate polypeptide 2 
DYNC1I1               0.018   dynein, cytoplasmic 1, intermediate chain 1 isoform a...
DYNC1I1               0.018   dynein, cytoplasmic 1, intermediate chain 1 isoform...
DYNC1I1               0.018   dynein, cytoplasmic 1, intermediate chain 1 isoform...
DYNC1I2               0.017   dynein, cytoplasmic 1, intermediate chain 2 
WDR34                 0.011   WD repeat domain 34 
WDR78                 0.007   WD repeat domain 78 isoform 1 
WDR87                 0.007   NYD-SP11 protein 
WDR60                 0.007   WD repeat domain 60 
ANK3                  0.007   ankyrin 3 isoform 1 
ROCK2                 0.007   Rho-associated, coiled-coil containing protein kinas...
SFRS17A               0.007   DNA segment on chromosome X and Y (unique) 155 expre...
FILIP1L               0.006   filamin A interacting protein 1-like isoform 3 [Hom...
FILIP1L               0.006   filamin A interacting protein 1-like isoform 1 [Hom...
DNAI1                 0.006   dynein, axonemal, intermediate chain 1 
CCDC34                0.006   coiled-coil domain containing 34 isoform 1 
MNS1                  0.006   meiosis-specific nuclear structural 1 
PWP1                  0.006   periodic tryptophan protein 1 
ASCC3                 0.006   activating signal cointegrator 1 complex subunit 3 i...
BAT2D1                0.006   HBxAg transactivated protein 2 
FLJ44817              0.005   similar to pleckstrin homology domain protein (5V32...
CEP290                0.005   centrosomal protein 290kDa 
SWAP70                0.005   SWAP-70 protein 
PHF14                 0.005   PHD finger protein 14 isoform 2 
PHF14                 0.005   PHD finger protein 14 isoform 1 
FAM186A               0.005   family with sequence similarity 186, member A [Homo...
TTK                   0.005   TTK protein kinase 
ANKRD12               0.005   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.005   ankyrin repeat domain 12 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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