SPG20 13577

Name: SPG20	Sequence: fasta or formatted (666aa)		NCBI GI: 21703346
Description: spartin		Referenced in: Cytoskeleton
Other entries for this name: alt mRNA [666aa] spartin alt mRNA [666aa] spartin alt mRNA [666aa] spartin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 57 2 C cysteine 1.5 10 1 D aspartate 4.4 29 2 E glutamate 9.2 61 3 F phenylalanine 2.4 16 2 G glycine 7.5 50 2 H histidine 2.0 13 2 I isoleucine 3.5 23 2 K lysine 8.0 53 3 L leucine 7.8 52 2 M methionine 1.4 9 1 N asparagine 4.7 31 2 P proline 6.6 44 3 Q glutamine 5.4 36 2 R arginine 3.6 24 1 S serine 7.4 49 2 T threonine 4.7 31 1 V valine 8.0 53 2 W tryptophan 1.1 7 1 Y tyrosine 2.7 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spartin SPG20 1.000 spartin SPG20 1.000 spartin SPG20 1.000 spartin SPAST 0.023 spastin isoform 2 SPAST 0.021 spastin isoform 1 SYNPO2L 0.012 synaptopodin 2-like isoform a SYNPO2L 0.012 synaptopodin 2-like isoform b NAV2 0.008 neuron navigator 2 isoform 3 NAV2 0.008 neuron navigator 2 isoform 1 NAV2 0.008 neuron navigator 2 isoform 2 ATN1 0.008 atrophin-1 ATN1 0.008 atrophin-1 RNASEN 0.008 ribonuclease III, nuclear isoform 2 RNASEN 0.008 ribonuclease III, nuclear isoform 1 BAT2D1 0.008 HBxAg transactivated protein 2 GPR152 0.008 G protein-coupled receptor 152 DKFZP564O0823 0.007 DKFZP564O0823 protein LOC440829 0.007 PREDICTED: transmembrane protein 46-like LOC440829 0.007 PREDICTED: transmembrane protein 46-like CUX2 0.007 cut-like 2 FAM123A 0.007 hypothetical protein LOC219287 isoform 2 FAM123A 0.007 hypothetical protein LOC219287 isoform 1 MUC7 0.006 mucin 7, secreted precursor MUC7 0.006 mucin 7, secreted precursor MUC7 0.006 mucin 7, secreted precursor FURIN 0.006 furin preproprotein GON4L 0.006 gon-4-like isoform a NASP 0.006 nuclear autoantigenic sperm protein isoform 2 NASP 0.006 nuclear autoantigenic sperm protein isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.