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Search of human proteins with 216547554
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|216547554 Fas apoptotic inhibitory molecule 3 isoform b
[Homo sapiens]
(278 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|216547554 Fas apoptotic inhibitory molecule 3 isoform b [Homo... 573 e-164
gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo... 543 e-155
gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo s... 543 e-155
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 38 0.009
gi|39995107 Fas-activated serine/threonine kinase isoform 4 [Hom... 35 0.072
gi|239756124 PREDICTED: hypothetical protein [Homo sapiens] 35 0.094
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi... 35 0.094
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 35 0.094
gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens] 35 0.094
gi|169209664 PREDICTED: hypothetical protein FLJ39639 [Homo sapi... 34 0.16
gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens] 34 0.16
gi|113426298 PREDICTED: hypothetical protein FLJ39639 [Homo sapi... 34 0.16
gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens] 34 0.16
gi|113425870 PREDICTED: hypothetical protein LOC283876 [Homo sap... 34 0.16
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 34 0.16
gi|14249534 hypothetical protein LOC84915 [Homo sapiens] 34 0.16
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 33 0.21
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 33 0.27
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 33 0.27
gi|5729822 Fas-activated serine/threonine kinase isoform 1 [Homo... 33 0.27
gi|239749957 PREDICTED: hypothetical protein [Homo sapiens] 33 0.36
gi|148539591 INO80 complex subunit D [Homo sapiens] 33 0.36
gi|69885149 Fc receptor-like and mucin-like 1 [Homo sapiens] 33 0.36
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 32 0.47
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 32 0.47
gi|55750053 atrophin-1 [Homo sapiens] 32 0.47
gi|55750041 atrophin-1 [Homo sapiens] 32 0.47
gi|6631102 protocadherin 8 isoform 1 precursor [Homo sapiens] 32 0.47
gi|221139926 NHS-like 1 [Homo sapiens] 32 0.61
gi|19743796 SH3 and multiple ankyrin repeat domains 2 isoform 2 ... 32 0.61
>gi|216547554 Fas apoptotic inhibitory molecule 3 isoform b [Homo
sapiens]
Length = 278
Score = 573 bits (1477), Expect = e-164
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 1 MDFWLWPLYFLPEYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKV 60
MDFWLWPLYFLPEYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKV
Sbjct: 1 MDFWLWPLYFLPEYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKV 60
Query: 61 PPVHHSSPTTQITHRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTR 120
PPVHHSSPTTQITHRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTR
Sbjct: 61 PPVHHSSPTTQITHRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTR 120
Query: 121 LHRQRALDYGSQSGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVR 180
LHRQRALDYGSQSGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVR
Sbjct: 121 LHRQRALDYGSQSGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVR 180
Query: 181 MRALESSQRPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSES 240
MRALESSQRPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSES
Sbjct: 181 MRALESSQRPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSES 240
Query: 241 PWLHAPSLKTSCEYVSLYHQPAAMMEDSDSDDYINVPA 278
PWLHAPSLKTSCEYVSLYHQPAAMMEDSDSDDYINVPA
Sbjct: 241 PWLHAPSLKTSCEYVSLYHQPAAMMEDSDSDDYINVPA 278
>gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
Length = 390
Score = 543 bits (1399), Expect = e-155
Identities = 266/266 (100%), Positives = 266/266 (100%)
Query: 13 EYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSPTTQI 72
EYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSPTTQI
Sbjct: 125 EYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSPTTQI 184
Query: 73 THRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALDYGSQ 132
THRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALDYGSQ
Sbjct: 185 THRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALDYGSQ 244
Query: 133 SGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQRPRG 192
SGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQRPRG
Sbjct: 245 SGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQRPRG 304
Query: 193 SPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSLKTSC 252
SPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSLKTSC
Sbjct: 305 SPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSLKTSC 364
Query: 253 EYVSLYHQPAAMMEDSDSDDYINVPA 278
EYVSLYHQPAAMMEDSDSDDYINVPA
Sbjct: 365 EYVSLYHQPAAMMEDSDSDDYINVPA 390
Score = 34.7 bits (78), Expect = 0.094
Identities = 12/12 (100%), Positives = 12/12 (100%)
Query: 1 MDFWLWPLYFLP 12
MDFWLWPLYFLP
Sbjct: 1 MDFWLWPLYFLP 12
>gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
Length = 390
Score = 543 bits (1399), Expect = e-155
Identities = 266/266 (100%), Positives = 266/266 (100%)
Query: 13 EYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSPTTQI 72
EYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSPTTQI
Sbjct: 125 EYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSPTTQI 184
Query: 73 THRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALDYGSQ 132
THRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALDYGSQ
Sbjct: 185 THRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALDYGSQ 244
Query: 133 SGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQRPRG 192
SGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQRPRG
Sbjct: 245 SGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQRPRG 304
Query: 193 SPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSLKTSC 252
SPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSLKTSC
Sbjct: 305 SPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSLKTSC 364
Query: 253 EYVSLYHQPAAMMEDSDSDDYINVPA 278
EYVSLYHQPAAMMEDSDSDDYINVPA
Sbjct: 365 EYVSLYHQPAAMMEDSDSDDYINVPA 390
Score = 34.7 bits (78), Expect = 0.094
Identities = 12/12 (100%), Positives = 12/12 (100%)
Query: 1 MDFWLWPLYFLP 12
MDFWLWPLYFLP
Sbjct: 1 MDFWLWPLYFLP 12
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 38.1 bits (87), Expect = 0.009
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 166 RRKALSRRARRLAVRMRALESSQRPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPG 225
+++A+ R + + ++ R Q PR P A PR RGA AA AP P
Sbjct: 78 QQRAVLRVSYKGSISYRNAARVQPPRRGATP-------PAPPRAPRGAPAAAAAAAPPPT 130
Query: 226 PGAPLPPAPL 235
P P PPAP+
Sbjct: 131 PAPPPPPAPV 140
Score = 28.5 bits (62), Expect = 6.8
Identities = 28/86 (32%), Positives = 30/86 (34%), Gaps = 14/86 (16%)
Query: 169 ALSRRARRLAVRMRALESSQRPRGSPRPRSQNNIYSACPRRARGADAA-----GTGEAPV 223
A RA R A S P P PR+Q A P A A A G AP
Sbjct: 143 AAPARAPRAAAAAATAPPSPGP-AQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPP 201
Query: 224 PG--------PGAPLPPAPLQVSESP 241
P P P PPAP Q + P
Sbjct: 202 PAVAAREPPLPPPPQPPAPPQQQQPP 227
>gi|39995107 Fas-activated serine/threonine kinase isoform 4 [Homo
sapiens]
Length = 408
Score = 35.0 bits (79), Expect = 0.072
Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 22/63 (34%)
Query: 188 QRPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPG--------------APLPPA 233
+RPRG P PR+ PR GA AG GE+ P G P PP
Sbjct: 2 RRPRGEPGPRA--------PRPTEGATCAGPGESCFPSDGPLVCALEQERRLRLPPKPPP 53
Query: 234 PLQ 236
PLQ
Sbjct: 54 PLQ 56
>gi|239756124 PREDICTED: hypothetical protein [Homo sapiens]
Length = 348
Score = 34.7 bits (78), Expect = 0.094
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 10/116 (8%)
Query: 122 HRQRALDYGSQSGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRM 181
HR GS G+E + P G L + + RA ++ R R R
Sbjct: 8 HRHNQSTAGSDQGKESKQ----TPAGRGRILTSQGTRPLTRAARTQEL--RGQREPHERQ 61
Query: 182 RALESS-QRPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPV---PGPGAPLPPA 233
RA S+ + G PRPR + C R+ D++G G++ + PGP PP+
Sbjct: 62 RAARSAPELASGPPRPRLAGHFDPECSTRSSRTDSSGKGQSSLRASPGPPRRRPPS 117
>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 547
Score = 34.7 bits (78), Expect = 0.094
Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 168 KALSRRARRLAVRMRALESSQRPRGSP-RPRSQNNIYSACPRRARGADAAGTGEAPVPGP 226
KA RARR A R+ S RPR +P R SQ+ + CP + GA T PVP
Sbjct: 363 KAAVPRARRSANRL-PRPSGPRPRPAPARSPSQSPAGTPCPVLSLGARRGVTLPCPVPAE 421
Query: 227 GAP---------LPPAPLQV---SESPWLHAPSLKTSCEYV-SLYHQPAA 263
AP L P+P Q + P P+ +C + +Y PAA
Sbjct: 422 AAPRDFCQRFPALEPSPRQPPARAPRPSPDLPAPLDACPWAPPVYAPPAA 471
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 34.7 bits (78), Expect = 0.094
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 180 RMRALESSQRPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSE 239
R RA PR SP R ++ P R G AAG G P P P P PP + E
Sbjct: 190 RPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQP--PPPPCATRREE 247
>gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]
Length = 525
Score = 34.7 bits (78), Expect = 0.094
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 192 GSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAP 234
GSP P S N + P A A AA A PGP P PP P
Sbjct: 24 GSPGP-SANAAATPAPGNAAAAAAAAAAAAAAPGPTPPAPPGP 65
>gi|169209664 PREDICTED: hypothetical protein FLJ39639 [Homo
sapiens]
Length = 284
Score = 33.9 bits (76), Expect = 0.16
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Query: 189 RPRGSPRPRSQNNIYSACPRRARGADAAGT-GEAPV-PGPGAPLPPAP 234
RPR SP+PR+ A RGA T G AP P P PLPP P
Sbjct: 90 RPRTSPKPRA------ATGTTVRGASVKRTGGPAPAQPSPPGPLPPTP 131
>gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens]
Length = 409
Score = 33.9 bits (76), Expect = 0.16
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 18/116 (15%)
Query: 153 LALLGLVVKRAVERRKALSRRARRLAVRMRALESSQRPRGSPRPRSQNNIYSACP----- 207
L LL L+ R +E A R+++ A S+ P + +Q N A P
Sbjct: 268 LGLLRLI--REMEAWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDA 325
Query: 208 --------RRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSLKTSCEYV 255
ARGA AAG GE+ GP P++V PW +P+ +S +V
Sbjct: 326 AEAASATKEAARGAPAAGEGESAPAGPEGLGQARPIEV---PWGSSPARMSSAVWV 378
>gi|113426298 PREDICTED: hypothetical protein FLJ39639 [Homo
sapiens]
Length = 284
Score = 33.9 bits (76), Expect = 0.16
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Query: 189 RPRGSPRPRSQNNIYSACPRRARGADAAGT-GEAPV-PGPGAPLPPAP 234
RPR SP+PR+ A RGA T G AP P P PLPP P
Sbjct: 90 RPRTSPKPRA------ATGTTVRGASVKRTGGPAPAQPSPPGPLPPTP 131
>gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens]
Length = 409
Score = 33.9 bits (76), Expect = 0.16
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 18/116 (15%)
Query: 153 LALLGLVVKRAVERRKALSRRARRLAVRMRALESSQRPRGSPRPRSQNNIYSACP----- 207
L LL L+ R +E A R+++ A S+ P + +Q N A P
Sbjct: 268 LGLLRLI--REMEAWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDA 325
Query: 208 --------RRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSLKTSCEYV 255
ARGA AAG GE+ GP P++V PW +P+ +S +V
Sbjct: 326 AEAASATKEAARGAPAAGEGESAPAGPEGLGQARPIEV---PWGSSPARMSSAVWV 378
>gi|113425870 PREDICTED: hypothetical protein LOC283876 [Homo
sapiens]
Length = 284
Score = 33.9 bits (76), Expect = 0.16
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Query: 189 RPRGSPRPRSQNNIYSACPRRARGADAAGT-GEAPV-PGPGAPLPPAP 234
RPR SP+PR+ A RGA T G AP P P PLPP P
Sbjct: 90 RPRTSPKPRA------ATGTTVRGASVKRTGGPAPAQPSPPGPLPPTP 131
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 33.9 bits (76), Expect = 0.16
Identities = 43/180 (23%), Positives = 61/180 (33%), Gaps = 34/180 (18%)
Query: 52 TTPAQRGKVPPVHHSSPTTQITHRPRVSRAS--SVAGDKPRTFLPSTTASKISAL-EGLL 108
++P R + PP H SP+ SR+S + PRT S S GL
Sbjct: 1712 SSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQ 1771
Query: 109 KPQTPSYNHHTRLHRQRALDYGSQS-----------------GREGQGFHILIPTILGLF 151
+ ++ S TR R+R SQS R G G+H P
Sbjct: 1772 RSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSP------ 1825
Query: 152 LLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQRPRGSPRPRSQNNIYSACPRRAR 211
++ R + RR R S R +P RS++ A RR+R
Sbjct: 1826 --------ARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSR 1877
Score = 29.3 bits (64), Expect = 4.0
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 37 QMPAYASSSK-FVTRVTTPAQRGKVPPVHHSSPT-TQITHR--PRVSRASSVAGDKPRTF 92
Q P+ +SS + V + +P QR SSP+ +++T R PR SR+ S +
Sbjct: 907 QSPSRSSSPQPKVKAIISPRQRSHSGS---SSPSPSRVTSRTTPRRSRSVSPCSNVESRL 963
Query: 93 LPSTTASKISALEGLLKPQTPSYNHHT 119
LP + S S+ + +KP+TP H+
Sbjct: 964 LPRYSHSGSSSPDTKVKPETPPRQSHS 990
>gi|14249534 hypothetical protein LOC84915 [Homo sapiens]
Length = 452
Score = 33.9 bits (76), Expect = 0.16
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 159 VVKRAVERRKALSRRARRLAVRMRALESSQRPRGSPRPRSQNNIYSACPRRARGADAAGT 218
V+K A +R LS A ++ + + S+ P P+P P G AA T
Sbjct: 125 VLKSAEGKRTKLSPAAVQVGIAPYPVPSTLGPLAYPKPPE-------APAPPPGLPAAAT 177
Query: 219 GEA--PVPGPGAPLPPAPL 235
+ P+PG G PLPP+ L
Sbjct: 178 AASVIPLPGRGLPLPPSNL 196
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 33.5 bits (75), Expect = 0.21
Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 14/84 (16%)
Query: 173 RARRLAVRMRALESSQRPRGSPRPRSQN--NIYSACPRRARGADAAGTGEAPVPGP---- 226
R R A R+ AL ++Q R SP P+ +I S P + A AP PGP
Sbjct: 61 RERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPAR 120
Query: 227 ------GAPLPPAPLQVSE--SPW 242
P PP P S +PW
Sbjct: 121 PSSPPPSPPSPPVPTAQSSLPAPW 144
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 33.1 bits (74), Expect = 0.27
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 173 RARRLAVRMRALESSQRPRGSPRPRSQNNIYSACPR----RARGADAAGTGEAPVPGPGA 228
R R A R+ AL ++Q R SP P+ A P + RGA A +P P P
Sbjct: 61 RERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPAR 120
Query: 229 PLPPAP 234
P P P
Sbjct: 121 PSSPPP 126
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 33.1 bits (74), Expect = 0.27
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 173 RARRLAVRMRALESSQRPRGSPRPRSQNNIYSACPR----RARGADAAGTGEAPVPGPGA 228
R R A R+ AL ++Q R SP P+ A P + RGA A +P P P
Sbjct: 61 RERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPAR 120
Query: 229 PLPPAP 234
P P P
Sbjct: 121 PSSPPP 126
>gi|5729822 Fas-activated serine/threonine kinase isoform 1 [Homo
sapiens]
Length = 549
Score = 33.1 bits (74), Expect = 0.27
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 8/43 (18%)
Query: 188 QRPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPL 230
+RPRG P PR+ PR GA AG GE+ P P + L
Sbjct: 2 RRPRGEPGPRA--------PRPTEGATCAGPGESWSPSPNSML 36
>gi|239749957 PREDICTED: hypothetical protein [Homo sapiens]
Length = 707
Score = 32.7 bits (73), Expect = 0.36
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 12/97 (12%)
Query: 156 LGLVVKRAVERRKALSRRARRL--AVRMRALESSQRPRGSPRPRSQNNIYSACPRRARGA 213
LG + R +++ A R+ R A R A+ + + P G P RS I GA
Sbjct: 522 LGFFLWRRQQQQAAQRRQETRRTPAARAPAMRAQRGPGGVPATRS--GISPGIAVVPAGA 579
Query: 214 DAAG-TGEAPV-------PGPGAPLPPAPLQVSESPW 242
A G TG P+ P PG+ LPP + PW
Sbjct: 580 GALGETGGCPIFLPCWMRPPPGSSLPPCFSLLGPGPW 616
>gi|148539591 INO80 complex subunit D [Homo sapiens]
Length = 1027
Score = 32.7 bits (73), Expect = 0.36
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 52 TTPAQRGKVPPVHHSSPTTQITHR---PRVSRASSVAGDKPRT--FLPSTTA-----SKI 101
T+ +G P H + Q++H+ P + + + D PRT L TA S I
Sbjct: 238 TSLPMQGVAPTTHTIAQARQLSHKRPLPLLPSSRAPTVDPPRTDRILMKATAFSPHFSCI 297
Query: 102 SALEGLLKPQTPSYNHHTRLHRQRALDYGSQSGRE 136
S L+ L+K T + T L LD+ +SG E
Sbjct: 298 SRLQRLVKLCTQKHQLDTDLFPHLGLDWSEESGEE 332
>gi|69885149 Fc receptor-like and mucin-like 1 [Homo sapiens]
Length = 376
Score = 32.7 bits (73), Expect = 0.36
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 183 ALESSQRPRGSPRP--RSQNNIYSACPRRARGAD--AAGTGEAPVPGPGAPLPPAPLQVS 238
A E +Q + SP+ R Q SA P A +A G AP PG PLPP P S
Sbjct: 260 ATEDNQVWKQSPQLEIRVQGASSSAAPPTLNPAPQKSAAPGTAPEEAPG-PLPPPPTPSS 318
Query: 239 ESPWLHAPSLKTSCEYVSLYHQPAAMME 266
E P +P LYHQ +++
Sbjct: 319 EDPGFSSP---LGMPDPHLYHQMGLLLK 343
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 32.3 bits (72), Expect = 0.47
Identities = 19/68 (27%), Positives = 27/68 (39%)
Query: 161 KRAVERRKALSRRARRLAVRMRALESSQRPRGSPRPRSQNNIYSACPRRARGADAAGTGE 220
KR +R+ S A R + ++ P + CP RA GAD G+
Sbjct: 227 KRPSSQRRCSSPSAARASATSAPRPTAPSSVAQPSSARSQRRRAPCPHRAGGADGVGSHG 286
Query: 221 APVPGPGA 228
A PG G+
Sbjct: 287 ARAPGEGS 294
>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
sapiens]
Length = 725
Score = 32.3 bits (72), Expect = 0.47
Identities = 19/68 (27%), Positives = 27/68 (39%)
Query: 161 KRAVERRKALSRRARRLAVRMRALESSQRPRGSPRPRSQNNIYSACPRRARGADAAGTGE 220
KR +R+ S A R + ++ P + CP RA GAD G+
Sbjct: 227 KRPSSQRRCSSPSAARASATSAPRPTAPSSVAQPSSARSQRRRAPCPHRAGGADGVGSHG 286
Query: 221 APVPGPGA 228
A PG G+
Sbjct: 287 ARAPGEGS 294
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 32.3 bits (72), Expect = 0.47
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 188 QRPRGSPRPRSQ------NNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESP 241
Q P G+P P Q + S P +G AA + P G P P P+ VS S
Sbjct: 207 QAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSG 266
Query: 242 WLHAPSLKTSCEYVSLYHQPAA 263
AP K V + P+A
Sbjct: 267 ASGAPPTKPPTTPVGGGNLPSA 288
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 32.3 bits (72), Expect = 0.47
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 188 QRPRGSPRPRSQ------NNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESP 241
Q P G+P P Q + S P +G AA + P G P P P+ VS S
Sbjct: 207 QAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSG 266
Query: 242 WLHAPSLKTSCEYVSLYHQPAA 263
AP K V + P+A
Sbjct: 267 ASGAPPTKPPTTPVGGGNLPSA 288
>gi|6631102 protocadherin 8 isoform 1 precursor [Homo sapiens]
Length = 1070
Score = 32.3 bits (72), Expect = 0.47
Identities = 45/173 (26%), Positives = 64/173 (36%), Gaps = 14/173 (8%)
Query: 77 RVSRASSVAGDKPRTFLPST-TASKISALEGLLKPQTPSYNHHTRLHRQRALDYGSQSGR 135
RV RA V D R L +T T S + G P P+ + +R+ GS+ G
Sbjct: 684 RVFRALLVISDGGRPPLTTTATVSFVVTAGGGRGPAAPA----SAGSPERSRPPGSRLGV 739
Query: 136 EGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQRPR---- 191
G P I+ + L L++ + +RR + VR +RP
Sbjct: 740 SGSVLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKE--VRKGGALREERPGAAGG 797
Query: 192 GSPRPRSQNNIYSACPRRARGADAA---GTGEAPVPGPGAPLPPAPLQVSESP 241
G+ P S R D GTG+AP P A PP + +E P
Sbjct: 798 GASAPGSPEEAARGAGPRPNMFDVLTFPGTGKAPFGSPAADAPPPAVAAAEVP 850
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 32.0 bits (71), Expect = 0.61
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 215 AAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSLKTSCEYVS-LYHQP 261
A G+ AP P P P PP P SP+L P T C S L H P
Sbjct: 923 AVGSPPAPPPPP-VPSPPFPCPADRSPFLPPPPPVTDCSQGSPLPHSP 969
>gi|19743796 SH3 and multiple ankyrin repeat domains 2 isoform 2
[Homo sapiens]
Length = 281
Score = 32.0 bits (71), Expect = 0.61
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 19/140 (13%)
Query: 48 VTRVTTP--AQRGKVPPVHHSSPTTQITHRPR---------VSRAS-SVAGDKPRTFLPS 95
VTR P R K PP +PTT +T R + V +AS DKP +P+
Sbjct: 131 VTRNLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELVDKASVRKKKDKPEEIVPA 190
Query: 96 TTASKISALEGLLKPQTPSYNHHTRLHRQRALDYGS--QSGREGQGFHILIPTILGLFLL 153
+ S+ +A ++P+ + R GS S E QG ++ PT+ G
Sbjct: 191 SKPSR-AAENMAVEPRVATIKQRP---SSRCFPAGSDMNSVYERQGIAVMTPTVPGSPKA 246
Query: 154 ALLGLVVKRAVERRKALSRR 173
LG + + + R+K++ ++
Sbjct: 247 PFLG-IPRGTMRRQKSIGKK 265
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,933,844
Number of Sequences: 37866
Number of extensions: 727293
Number of successful extensions: 5932
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 5633
Number of HSP's gapped (non-prelim): 431
length of query: 278
length of database: 18,247,518
effective HSP length: 101
effective length of query: 177
effective length of database: 14,423,052
effective search space: 2552880204
effective search space used: 2552880204
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.