Guide to the Human Genome
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Name: FCRLA Sequence: fasta or formatted (376aa) NCBI GI: 69885149
Description:

Fc receptor-like and mucin-like 1

Referenced in:

Fc Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         34           2
 C cysteine            2.1          8           1
 D aspartate           4.0         15           2
 E glutamate           6.1         23           2
 F phenylalanine       3.5         13           1
 G glycine             7.4         28           1
 H histidine           2.7         10           1
 I isoleucine          2.9         11           1
 K lysine              3.5         13           2
 L leucine            11.2         42           3
 M methionine          2.4          9           1
 N asparagine          1.1          4           1
 P proline             9.8         37           4
 Q glutamine           5.9         22           1
 R arginine            3.5         13           1
 S serine              9.0         34           3
 T threonine           5.9         22           2
 V valine              6.1         23           2
 W tryptophan          1.9          7           1
 Y tyrosine            2.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Fc receptor-like and mucin-like 1 
FCRL6                 0.213   Fc receptor-like 6 
FCRLB                 0.189   Fc receptor-like B 
FCGR1A                0.173   Fc fragment of IgG, high affinity Ia, receptor (CD64...
FCRL3                 0.133   Fc receptor-like 3 precursor 
FCRL4                 0.133   Fc receptor-like 4 precursor 
FCRL5                 0.133   Fc receptor-like 5 
FCRL2                 0.118   Fc receptor-like 2 precursor 
FCER1A                0.067   Fc fragment of IgE, high affinity I, receptor for; al...
FCGR2C                0.066   Fc fragment of IgG, low affinity IIc, receptor [Hom...
FCGR2B                0.066   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR2B                0.066   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR2B                0.066   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR2B                0.066   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR2A                0.063   Fc fragment of IgG, low affinity IIa, receptor isof...
FCGR2A                0.063   Fc fragment of IgG, low affinity IIa, receptor isofo...
FCGR3A                0.052   Fc fragment of IgG, low affinity IIIa, receptor (CD...
FCGR3A                0.052   Fc fragment of IgG, low affinity IIIa, receptor (CD...
FCGR3A                0.052   Fc fragment of IgG, low affinity IIIa, receptor (CD...
FCGR3A                0.052   Fc fragment of IgG, low affinity IIIa, receptor (CD...
FCGR3A                0.052   Fc fragment of IgG, low affinity IIIa, receptor (CD1...
FCGR3B                0.047   low affinity immunoglobulin gamma Fc region recepto...
LILRA4                0.046   leukocyte immunoglobulin-like receptor subfamily A m...
FCGR1B                0.046   Fc fragment of IgG, high affinity Ib, receptor (CD64...
FCGR1B                0.040   Fc fragment of IgG, high affinity Ib, receptor (CD6...
LILRB2                0.039   leukocyte immunoglobulin-like receptor, subfamily B...
FCRL1                 0.036   Fc receptor-like 1 isoform 3 precursor 
FCRL1                 0.036   Fc receptor-like 1 isoform 2 precursor 
FCRL1                 0.036   Fc receptor-like 1 isoform 1 precursor 
LILRA1                0.036   leukocyte immunoglobulin-like receptor, subfamily A (...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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