Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FAIM3 Sequence: fasta or formatted (278aa) NCBI GI: 216547554
Description:

Fas apoptotic inhibitory molecule 3 isoform b

Referenced in:

TNF and Related Signals

Other entries for this name:
alt prot [390aa] Fas apoptotic inhibitory molecule 3 isoform a
alt prot [390aa] Fas apoptotic inhibitory molecule 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         26           2
 C cysteine            0.7          2           1
 D aspartate           2.9          8           2
 E glutamate           4.7         13           2
 F phenylalanine       2.9          8           1
 G glycine             5.4         15           1
 H histidine           3.6         10           2
 I isoleucine          2.5          7           1
 K lysine              3.2          9           1
 L leucine             9.7         27           2
 M methionine          2.2          6           2
 N asparagine          1.4          4           2
 P proline            11.9         33           2
 Q glutamine           4.3         12           1
 R arginine            9.4         26           2
 S serine             10.1         28           3
 T threonine           5.4         15           2
 V valine              5.0         14           2
 W tryptophan          1.8          5           1
 Y tyrosine            3.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Fas apoptotic inhibitory molecule 3 isoform b [Homo... 
FAIM3                 0.945   Fas apoptotic inhibitory molecule 3 isoform a [Homo...
FAIM3                 0.945   Fas apoptotic inhibitory molecule 3 isoform a 
SAMD1                 0.024   sterile alpha motif domain containing 1 
FASTK                 0.018   Fas-activated serine/threonine kinase isoform 4 [Hom...
LOC100292541          0.018   PREDICTED: hypothetical protein 
LOC440829             0.018   PREDICTED: transmembrane protein 46-like 
LOC100130360          0.018   PREDICTED: hypothetical protein 
BTBD2                 0.018   BTB (POZ) domain containing 2 
FLJ39639              0.016   PREDICTED: hypothetical protein FLJ39639 
LOC649238             0.016   PREDICTED: similar to hCG1645335 
FLJ39639              0.016   PREDICTED: hypothetical protein FLJ39639 
LOC649238             0.016   PREDICTED: similar to hCG1645335 
FLJ39639              0.016   PREDICTED: hypothetical protein LOC283876 
SRRM2                 0.016   splicing coactivator subunit SRm300 
C12orf34              0.016   hypothetical protein LOC84915 
LOC100131102          0.015   PREDICTED: hypothetical protein 
LOC100131102          0.015   PREDICTED: hypothetical protein 
LOC100131102          0.015   PREDICTED: hypothetical protein 
FASTK                 0.015   Fas-activated serine/threonine kinase isoform 1 [Homo...
LOC100294438          0.015   PREDICTED: hypothetical protein 
INO80D                0.015   INO80 complex subunit D 
FCRLA                 0.015   Fc receptor-like and mucin-like 1 
LOC100289661          0.013   PREDICTED: hypothetical protein 
LOC100289661          0.013   PREDICTED: hypothetical protein XP_002343723 
ATN1                  0.013   atrophin-1 
ATN1                  0.013   atrophin-1 
PCDH8                 0.013   protocadherin 8 isoform 1 precursor 
NHSL1                 0.013   NHS-like 1 
SHANK2                0.013   SH3 and multiple ankyrin repeat domains 2 isoform 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press