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Search of human proteins with 215820652
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|215820652 StAR-related lipid transfer (START) domain
containing 8 isoform b [Homo sapiens]
(1023 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|215820652 StAR-related lipid transfer (START) domain containi... 2082 0.0
gi|215820650 StAR-related lipid transfer (START) domain containi... 2082 0.0
gi|31543659 StAR-related lipid transfer (START) domain containin... 2082 0.0
gi|41281907 StAR-related lipid transfer (START) domain containin... 683 0.0
gi|16445031 StAR-related lipid transfer (START) domain containin... 683 0.0
gi|41281898 StAR-related lipid transfer (START) domain containin... 683 0.0
gi|33188433 deleted in liver cancer 1 isoform 1 [Homo sapiens] 653 0.0
gi|33188437 deleted in liver cancer 1 isoform 2 [Homo sapiens] 653 0.0
gi|7382480 Rho GTPase activating protein 6 isoform 4 [Homo sapiens] 90 1e-17
gi|95091988 Rho GTPase activating protein 6 isoform 3 [Homo sapi... 90 1e-17
gi|95091875 Rho GTPase activating protein 6 isoform 1 [Homo sapi... 90 1e-17
gi|39932589 Rho GTPase activating protein 18 [Homo sapiens] 81 4e-15
gi|194272142 myosin IXB isoform 2 [Homo sapiens] 81 6e-15
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 81 6e-15
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 79 3e-14
gi|156071465 Rho GTPase activating protein 4 [Homo sapiens] 77 6e-14
gi|40255080 hypothetical protein LOC158763 [Homo sapiens] 76 1e-13
gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo ... 76 2e-13
gi|59710113 Rho GTPase activating protein 28 isoform a [Homo sap... 76 2e-13
gi|59710111 Rho GTPase activating protein 28 isoform b [Homo sap... 76 2e-13
gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Hom... 74 7e-13
gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Hom... 74 7e-13
gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [H... 74 7e-13
gi|156119615 myosin IXA [Homo sapiens] 73 1e-12
gi|71040096 Rho GTPase activating protein 30 isoform 2 [Homo sap... 71 5e-12
gi|71040098 Rho GTPase activating protein 30 isoform 1 [Homo sap... 71 5e-12
gi|7661858 Rho GTPase activating protein 11A isoform 1 [Homo sap... 70 8e-12
gi|40788018 Rho GTPase activating protein 11A isoform 2 [Homo sa... 70 8e-12
gi|82546845 breakpoint cluster region isoform 2 [Homo sapiens] 70 1e-11
gi|82546843 breakpoint cluster region isoform 1 [Homo sapiens] 70 1e-11
>gi|215820652 StAR-related lipid transfer (START) domain containing 8
isoform b [Homo sapiens]
Length = 1023
Score = 2082 bits (5395), Expect = 0.0
Identities = 1023/1023 (100%), Positives = 1023/1023 (100%)
Query: 1 MTLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAPPSPGL 60
MTLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAPPSPGL
Sbjct: 1 MTLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAPPSPGL 60
Query: 61 PATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRAPSSSDRPLLSPTQGQEGPQDKA 120
PATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRAPSSSDRPLLSPTQGQEGPQDKA
Sbjct: 61 PATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRAPSSSDRPLLSPTQGQEGPQDKA 120
Query: 121 KKRHRNRSFLKHLESLRRKEKSGSQQAEPKHSPATSEKVSKASSFRSCRGFLSAGFYRAK 180
KKRHRNRSFLKHLESLRRKEKSGSQQAEPKHSPATSEKVSKASSFRSCRGFLSAGFYRAK
Sbjct: 121 KKRHRNRSFLKHLESLRRKEKSGSQQAEPKHSPATSEKVSKASSFRSCRGFLSAGFYRAK 180
Query: 181 NWAATSAGGSGANTRKAWEAWPVASFRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLC 240
NWAATSAGGSGANTRKAWEAWPVASFRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLC
Sbjct: 181 NWAATSAGGSGANTRKAWEAWPVASFRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLC 240
Query: 241 PEDGHRLADWQPGRRWGCEGRRGSCGSTGSHASTYDNLPELYPAEPVMVGAEAEDEDDEE 300
PEDGHRLADWQPGRRWGCEGRRGSCGSTGSHASTYDNLPELYPAEPVMVGAEAEDEDDEE
Sbjct: 241 PEDGHRLADWQPGRRWGCEGRRGSCGSTGSHASTYDNLPELYPAEPVMVGAEAEDEDDEE 300
Query: 301 SGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGDEEEEEATSSVEIATVEVKCQAEA 360
SGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGDEEEEEATSSVEIATVEVKCQAEA
Sbjct: 301 SGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGDEEEEEATSSVEIATVEVKCQAEA 360
Query: 361 LSQMEVPAHGESPAWAQAEVQPAVLAPAQAPAEAEPVAQEEAEAPAPAPAPAPAQDSEQE 420
LSQMEVPAHGESPAWAQAEVQPAVLAPAQAPAEAEPVAQEEAEAPAPAPAPAPAQDSEQE
Sbjct: 361 LSQMEVPAHGESPAWAQAEVQPAVLAPAQAPAEAEPVAQEEAEAPAPAPAPAPAQDSEQE 420
Query: 421 AHSGGEPTFASSLSVEEGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRERRD 480
AHSGGEPTFASSLSVEEGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRERRD
Sbjct: 421 AHSGGEPTFASSLSVEEGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRERRD 480
Query: 481 SGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFMEKY 540
SGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFMEKY
Sbjct: 481 SGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFMEKY 540
Query: 541 TVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQC 600
TVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQC
Sbjct: 541 TVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQC 600
Query: 601 LDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKL 660
LDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKL
Sbjct: 601 LDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKL 660
Query: 661 TTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIASAEENQMTAGNLAV 720
TTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIASAEENQMTAGNLAV
Sbjct: 661 TTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIASAEENQMTAGNLAV 720
Query: 721 CLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVP 780
CLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVP
Sbjct: 721 CLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVP 780
Query: 781 QDMVLQLCSSYSAAELSPPGPALAELRQAQAAGVSLSLYMEENIQDLLRDAAERFKGWMS 840
QDMVLQLCSSYSAAELSPPGPALAELRQAQAAGVSLSLYMEENIQDLLRDAAERFKGWMS
Sbjct: 781 QDMVLQLCSSYSAAELSPPGPALAELRQAQAAGVSLSLYMEENIQDLLRDAAERFKGWMS 840
Query: 841 VPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEAL 900
VPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEAL
Sbjct: 841 VPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEAL 900
Query: 901 MPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVRALML 960
MPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVRALML
Sbjct: 901 MPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVRALML 960
Query: 961 TSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPE 1020
TSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPE
Sbjct: 961 TSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPE 1020
Query: 1021 TKL 1023
TKL
Sbjct: 1021 TKL 1023
>gi|215820650 StAR-related lipid transfer (START) domain containing 8
isoform a [Homo sapiens]
Length = 1103
Score = 2082 bits (5395), Expect = 0.0
Identities = 1023/1023 (100%), Positives = 1023/1023 (100%)
Query: 1 MTLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAPPSPGL 60
MTLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAPPSPGL
Sbjct: 81 MTLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAPPSPGL 140
Query: 61 PATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRAPSSSDRPLLSPTQGQEGPQDKA 120
PATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRAPSSSDRPLLSPTQGQEGPQDKA
Sbjct: 141 PATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRAPSSSDRPLLSPTQGQEGPQDKA 200
Query: 121 KKRHRNRSFLKHLESLRRKEKSGSQQAEPKHSPATSEKVSKASSFRSCRGFLSAGFYRAK 180
KKRHRNRSFLKHLESLRRKEKSGSQQAEPKHSPATSEKVSKASSFRSCRGFLSAGFYRAK
Sbjct: 201 KKRHRNRSFLKHLESLRRKEKSGSQQAEPKHSPATSEKVSKASSFRSCRGFLSAGFYRAK 260
Query: 181 NWAATSAGGSGANTRKAWEAWPVASFRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLC 240
NWAATSAGGSGANTRKAWEAWPVASFRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLC
Sbjct: 261 NWAATSAGGSGANTRKAWEAWPVASFRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLC 320
Query: 241 PEDGHRLADWQPGRRWGCEGRRGSCGSTGSHASTYDNLPELYPAEPVMVGAEAEDEDDEE 300
PEDGHRLADWQPGRRWGCEGRRGSCGSTGSHASTYDNLPELYPAEPVMVGAEAEDEDDEE
Sbjct: 321 PEDGHRLADWQPGRRWGCEGRRGSCGSTGSHASTYDNLPELYPAEPVMVGAEAEDEDDEE 380
Query: 301 SGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGDEEEEEATSSVEIATVEVKCQAEA 360
SGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGDEEEEEATSSVEIATVEVKCQAEA
Sbjct: 381 SGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGDEEEEEATSSVEIATVEVKCQAEA 440
Query: 361 LSQMEVPAHGESPAWAQAEVQPAVLAPAQAPAEAEPVAQEEAEAPAPAPAPAPAQDSEQE 420
LSQMEVPAHGESPAWAQAEVQPAVLAPAQAPAEAEPVAQEEAEAPAPAPAPAPAQDSEQE
Sbjct: 441 LSQMEVPAHGESPAWAQAEVQPAVLAPAQAPAEAEPVAQEEAEAPAPAPAPAPAQDSEQE 500
Query: 421 AHSGGEPTFASSLSVEEGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRERRD 480
AHSGGEPTFASSLSVEEGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRERRD
Sbjct: 501 AHSGGEPTFASSLSVEEGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRERRD 560
Query: 481 SGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFMEKY 540
SGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFMEKY
Sbjct: 561 SGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFMEKY 620
Query: 541 TVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQC 600
TVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQC
Sbjct: 621 TVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQC 680
Query: 601 LDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKL 660
LDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKL
Sbjct: 681 LDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKL 740
Query: 661 TTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIASAEENQMTAGNLAV 720
TTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIASAEENQMTAGNLAV
Sbjct: 741 TTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIASAEENQMTAGNLAV 800
Query: 721 CLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVP 780
CLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVP
Sbjct: 801 CLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVP 860
Query: 781 QDMVLQLCSSYSAAELSPPGPALAELRQAQAAGVSLSLYMEENIQDLLRDAAERFKGWMS 840
QDMVLQLCSSYSAAELSPPGPALAELRQAQAAGVSLSLYMEENIQDLLRDAAERFKGWMS
Sbjct: 861 QDMVLQLCSSYSAAELSPPGPALAELRQAQAAGVSLSLYMEENIQDLLRDAAERFKGWMS 920
Query: 841 VPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEAL 900
VPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEAL
Sbjct: 921 VPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEAL 980
Query: 901 MPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVRALML 960
MPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVRALML
Sbjct: 981 MPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVRALML 1040
Query: 961 TSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPE 1020
TSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPE
Sbjct: 1041 TSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPE 1100
Query: 1021 TKL 1023
TKL
Sbjct: 1101 TKL 1103
>gi|31543659 StAR-related lipid transfer (START) domain containing 8
isoform b [Homo sapiens]
Length = 1023
Score = 2082 bits (5395), Expect = 0.0
Identities = 1023/1023 (100%), Positives = 1023/1023 (100%)
Query: 1 MTLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAPPSPGL 60
MTLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAPPSPGL
Sbjct: 1 MTLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAPPSPGL 60
Query: 61 PATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRAPSSSDRPLLSPTQGQEGPQDKA 120
PATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRAPSSSDRPLLSPTQGQEGPQDKA
Sbjct: 61 PATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRAPSSSDRPLLSPTQGQEGPQDKA 120
Query: 121 KKRHRNRSFLKHLESLRRKEKSGSQQAEPKHSPATSEKVSKASSFRSCRGFLSAGFYRAK 180
KKRHRNRSFLKHLESLRRKEKSGSQQAEPKHSPATSEKVSKASSFRSCRGFLSAGFYRAK
Sbjct: 121 KKRHRNRSFLKHLESLRRKEKSGSQQAEPKHSPATSEKVSKASSFRSCRGFLSAGFYRAK 180
Query: 181 NWAATSAGGSGANTRKAWEAWPVASFRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLC 240
NWAATSAGGSGANTRKAWEAWPVASFRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLC
Sbjct: 181 NWAATSAGGSGANTRKAWEAWPVASFRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLC 240
Query: 241 PEDGHRLADWQPGRRWGCEGRRGSCGSTGSHASTYDNLPELYPAEPVMVGAEAEDEDDEE 300
PEDGHRLADWQPGRRWGCEGRRGSCGSTGSHASTYDNLPELYPAEPVMVGAEAEDEDDEE
Sbjct: 241 PEDGHRLADWQPGRRWGCEGRRGSCGSTGSHASTYDNLPELYPAEPVMVGAEAEDEDDEE 300
Query: 301 SGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGDEEEEEATSSVEIATVEVKCQAEA 360
SGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGDEEEEEATSSVEIATVEVKCQAEA
Sbjct: 301 SGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGDEEEEEATSSVEIATVEVKCQAEA 360
Query: 361 LSQMEVPAHGESPAWAQAEVQPAVLAPAQAPAEAEPVAQEEAEAPAPAPAPAPAQDSEQE 420
LSQMEVPAHGESPAWAQAEVQPAVLAPAQAPAEAEPVAQEEAEAPAPAPAPAPAQDSEQE
Sbjct: 361 LSQMEVPAHGESPAWAQAEVQPAVLAPAQAPAEAEPVAQEEAEAPAPAPAPAPAQDSEQE 420
Query: 421 AHSGGEPTFASSLSVEEGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRERRD 480
AHSGGEPTFASSLSVEEGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRERRD
Sbjct: 421 AHSGGEPTFASSLSVEEGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRERRD 480
Query: 481 SGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFMEKY 540
SGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFMEKY
Sbjct: 481 SGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFMEKY 540
Query: 541 TVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQC 600
TVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQC
Sbjct: 541 TVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQC 600
Query: 601 LDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKL 660
LDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKL
Sbjct: 601 LDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKL 660
Query: 661 TTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIASAEENQMTAGNLAV 720
TTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIASAEENQMTAGNLAV
Sbjct: 661 TTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIASAEENQMTAGNLAV 720
Query: 721 CLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVP 780
CLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVP
Sbjct: 721 CLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVP 780
Query: 781 QDMVLQLCSSYSAAELSPPGPALAELRQAQAAGVSLSLYMEENIQDLLRDAAERFKGWMS 840
QDMVLQLCSSYSAAELSPPGPALAELRQAQAAGVSLSLYMEENIQDLLRDAAERFKGWMS
Sbjct: 781 QDMVLQLCSSYSAAELSPPGPALAELRQAQAAGVSLSLYMEENIQDLLRDAAERFKGWMS 840
Query: 841 VPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEAL 900
VPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEAL
Sbjct: 841 VPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEAL 900
Query: 901 MPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVRALML 960
MPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVRALML
Sbjct: 901 MPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVRALML 960
Query: 961 TSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPE 1020
TSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPE
Sbjct: 961 TSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPE 1020
Query: 1021 TKL 1023
TKL
Sbjct: 1021 TKL 1023
>gi|41281907 StAR-related lipid transfer (START) domain containing 13
isoform beta [Homo sapiens]
Length = 1105
Score = 683 bits (1762), Expect = 0.0
Identities = 353/607 (58%), Positives = 452/607 (74%), Gaps = 20/607 (3%)
Query: 425 GEP---TFASSLSVE---EGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRER 478
GEP TF S + EG+S+S+ + S+++ S+NE+E G R+R
Sbjct: 511 GEPGLSTFPSPNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPPGV---------RDR 561
Query: 479 RDSGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFME 538
RDSGVGASLTRP R+LRW+SFQ SH+P S I+ Q A Q++LL + SLLRLTA ME
Sbjct: 562 RDSGVGASLTRPNRRLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLLRLTAIME 621
Query: 539 KYTVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRS 598
K+++ +K GW WS+PKFM+R K PDY+ + VFGVP ++HVQRTGQPLPQSIQQA+RYLRS
Sbjct: 622 KHSMSNKHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRS 681
Query: 599 QCLDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTS 658
CLDQVG+FRKSGVKSRI LRQMNE P+NV YE QSAYDVAD++KQ+FRDLPEP+FT+
Sbjct: 682 NCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTN 741
Query: 659 KLTTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIAS-AEENQMTAGN 717
KL+ TFL IYQ + K+Q L A QAA LLL DENREVLQTLL FL+D+ + EENQMT N
Sbjct: 742 KLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMN 801
Query: 718 LAVCLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLF 777
LAVCLAPS+FHLN+ KK+S SPR+ K+ G+P +DL++N+AA QGL+HMI +C +LF
Sbjct: 802 LAVCLAPSLFHLNLLKKES-SPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDRLF 860
Query: 778 QVPQDMVLQLCSSYSAAELSPPGPALAEL-RQAQAAGVSLSLYMEENIQDLLRDAAERFK 836
+VP ++V Q +SY AE+ P L EL Q + +G + Y+ IQ L ++A E+FK
Sbjct: 861 EVPHELVAQSRNSYVEAEIHV--PTLEELGTQLEESGATFHTYLNHLIQGLQKEAKEKFK 918
Query: 837 GWMSVPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQV 896
GW++ +T+LA +K DG+PL+LWKAS EV APP+VVL+RVLRER LWDED ++ +V
Sbjct: 919 GWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKV 978
Query: 897 LEALMPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVR 956
+E L E+Y YV +SMAPHP RDFVVLR W++DLP+G C LVS S++ E+ GVR
Sbjct: 979 VETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVR 1038
Query: 957 ALMLTSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQA 1016
A+++ SQYL+EPCG G+SRLTHICR DL+G SP+WY+K FGHLCA EVA+IR+SF L A
Sbjct: 1039 AVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSFQPLIA 1098
Query: 1017 AGPETKL 1023
GPETK+
Sbjct: 1099 EGPETKI 1105
Score = 139 bits (351), Expect = 1e-32
Identities = 127/412 (30%), Positives = 181/412 (43%), Gaps = 84/412 (20%)
Query: 2 TLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLL-------- 53
TLN CASMKL+V+FQ K+ +DS+EE+ C IS+ W FQ+ S+ WS + L
Sbjct: 104 TLNKCASMKLDVNFQRKKGDDSDEEDLC-ISNKWTFQRTSRRWSRVDDLYTLLPRGDRNG 162
Query: 54 APPSPGLPATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRA----PSSSDRPLLSP 109
+P G+ T+S ESVLT+LS + I PG+ P D PL+S
Sbjct: 163 SPGGTGMRNTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSS 222
Query: 110 TQGQEG---------PQDKAKKRHRNRSFLKHLESLRRKEKSGSQQAEPK------HSPA 154
+ Q P+++ R R +SFLK +E+LR K G + + P
Sbjct: 223 SLPQPPRDVLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPM 282
Query: 155 TSEKVSKASSFR---------------SCRGFLSAGFYRAKNWAATSAGGSGANT----- 194
++ + + +CR L + + + SG +T
Sbjct: 283 LQQEPESFKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKE 342
Query: 195 RKAWEA------------------WPVAS--FRHPQWTHRGDCLVHVPGDHKPGTFPRSL 234
RK EA P A R ++ + + +VH+P DHKPGTFP++L
Sbjct: 343 RKCHEANKRGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKAL 402
Query: 235 SIESLCPEDGHRLADWQPGR----RWGCEGRR-----GSCGSTGSHASTYDNLPELYPAE 285
SIESL P D +W+ G R G R SC S S YDN+P +
Sbjct: 403 SIESLSPTDSSNGVNWRTGSISLGREQVPGAREPRLMASC-HRASRVSIYDNVPGSH--- 458
Query: 286 PVMVGAEAEDEDDEESGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGD 337
+ A D D E + HLDDILQHV GLQ+ V+ WS+ + P+L D
Sbjct: 459 ---LYASTGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHD 507
>gi|16445031 StAR-related lipid transfer (START) domain containing 13
isoform gamma [Homo sapiens]
Length = 995
Score = 683 bits (1762), Expect = 0.0
Identities = 353/607 (58%), Positives = 452/607 (74%), Gaps = 20/607 (3%)
Query: 425 GEP---TFASSLSVE---EGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRER 478
GEP TF S + EG+S+S+ + S+++ S+NE+E G R+R
Sbjct: 401 GEPGLSTFPSPNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPPGV---------RDR 451
Query: 479 RDSGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFME 538
RDSGVGASLTRP R+LRW+SFQ SH+P S I+ Q A Q++LL + SLLRLTA ME
Sbjct: 452 RDSGVGASLTRPNRRLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLLRLTAIME 511
Query: 539 KYTVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRS 598
K+++ +K GW WS+PKFM+R K PDY+ + VFGVP ++HVQRTGQPLPQSIQQA+RYLRS
Sbjct: 512 KHSMSNKHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRS 571
Query: 599 QCLDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTS 658
CLDQVG+FRKSGVKSRI LRQMNE P+NV YE QSAYDVAD++KQ+FRDLPEP+FT+
Sbjct: 572 NCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTN 631
Query: 659 KLTTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIAS-AEENQMTAGN 717
KL+ TFL IYQ + K+Q L A QAA LLL DENREVLQTLL FL+D+ + EENQMT N
Sbjct: 632 KLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMN 691
Query: 718 LAVCLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLF 777
LAVCLAPS+FHLN+ KK+S SPR+ K+ G+P +DL++N+AA QGL+HMI +C +LF
Sbjct: 692 LAVCLAPSLFHLNLLKKES-SPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDRLF 750
Query: 778 QVPQDMVLQLCSSYSAAELSPPGPALAEL-RQAQAAGVSLSLYMEENIQDLLRDAAERFK 836
+VP ++V Q +SY AE+ P L EL Q + +G + Y+ IQ L ++A E+FK
Sbjct: 751 EVPHELVAQSRNSYVEAEIHV--PTLEELGTQLEESGATFHTYLNHLIQGLQKEAKEKFK 808
Query: 837 GWMSVPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQV 896
GW++ +T+LA +K DG+PL+LWKAS EV APP+VVL+RVLRER LWDED ++ +V
Sbjct: 809 GWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKV 868
Query: 897 LEALMPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVR 956
+E L E+Y YV +SMAPHP RDFVVLR W++DLP+G C LVS S++ E+ GVR
Sbjct: 869 VETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVR 928
Query: 957 ALMLTSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQA 1016
A+++ SQYL+EPCG G+SRLTHICR DL+G SP+WY+K FGHLCA EVA+IR+SF L A
Sbjct: 929 AVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSFQPLIA 988
Query: 1017 AGPETKL 1023
GPETK+
Sbjct: 989 EGPETKI 995
Score = 127 bits (319), Expect = 5e-29
Identities = 121/405 (29%), Positives = 175/405 (43%), Gaps = 84/405 (20%)
Query: 9 MKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLL--------APPSPGL 60
MKL+V+FQ K+ +DS+EE+ C IS+ W FQ+ S+ WS + L +P G+
Sbjct: 1 MKLDVNFQRKKGDDSDEEDLC-ISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGSPGGTGM 59
Query: 61 PATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRA----PSSSDRPLLSPTQGQEG- 115
T+S ESVLT+LS + I PG+ P D PL+S + Q
Sbjct: 60 RNTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSSSLPQPPR 119
Query: 116 --------PQDKAKKRHRNRSFLKHLESLRRKEKSGSQQAEPK------HSPATSEKVSK 161
P+++ R R +SFLK +E+LR K G + + P ++
Sbjct: 120 DVLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEPES 179
Query: 162 ASSFR---------------SCRGFLSAGFYRAKNWAATSAGGSGANT-----RKAWEA- 200
+ + +CR L + + + SG +T RK EA
Sbjct: 180 FKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEAN 239
Query: 201 -----------------WPVAS--FRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLCP 241
P A R ++ + + +VH+P DHKPGTFP++LSIESL P
Sbjct: 240 KRGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSP 299
Query: 242 EDGHRLADWQPGR----RWGCEGRR-----GSCGSTGSHASTYDNLPELYPAEPVMVGAE 292
D +W+ G R G R SC S S YDN+P + + A
Sbjct: 300 TDSSNGVNWRTGSISLGREQVPGAREPRLMASC-HRASRVSIYDNVPGSH------LYAS 352
Query: 293 AEDEDDEESGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGD 337
D D E + HLDDILQHV GLQ+ V+ WS+ + P+L D
Sbjct: 353 TGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHD 397
>gi|41281898 StAR-related lipid transfer (START) domain containing 13
isoform alpha [Homo sapiens]
Length = 1113
Score = 683 bits (1762), Expect = 0.0
Identities = 353/607 (58%), Positives = 452/607 (74%), Gaps = 20/607 (3%)
Query: 425 GEP---TFASSLSVE---EGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRER 478
GEP TF S + EG+S+S+ + S+++ S+NE+E G R+R
Sbjct: 519 GEPGLSTFPSPNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPPGV---------RDR 569
Query: 479 RDSGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFME 538
RDSGVGASLTRP R+LRW+SFQ SH+P S I+ Q A Q++LL + SLLRLTA ME
Sbjct: 570 RDSGVGASLTRPNRRLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLLRLTAIME 629
Query: 539 KYTVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRS 598
K+++ +K GW WS+PKFM+R K PDY+ + VFGVP ++HVQRTGQPLPQSIQQA+RYLRS
Sbjct: 630 KHSMSNKHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRS 689
Query: 599 QCLDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTS 658
CLDQVG+FRKSGVKSRI LRQMNE P+NV YE QSAYDVAD++KQ+FRDLPEP+FT+
Sbjct: 690 NCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTN 749
Query: 659 KLTTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIAS-AEENQMTAGN 717
KL+ TFL IYQ + K+Q L A QAA LLL DENREVLQTLL FL+D+ + EENQMT N
Sbjct: 750 KLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMN 809
Query: 718 LAVCLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLF 777
LAVCLAPS+FHLN+ KK+S SPR+ K+ G+P +DL++N+AA QGL+HMI +C +LF
Sbjct: 810 LAVCLAPSLFHLNLLKKES-SPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDRLF 868
Query: 778 QVPQDMVLQLCSSYSAAELSPPGPALAEL-RQAQAAGVSLSLYMEENIQDLLRDAAERFK 836
+VP ++V Q +SY AE+ P L EL Q + +G + Y+ IQ L ++A E+FK
Sbjct: 869 EVPHELVAQSRNSYVEAEIHV--PTLEELGTQLEESGATFHTYLNHLIQGLQKEAKEKFK 926
Query: 837 GWMSVPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQV 896
GW++ +T+LA +K DG+PL+LWKAS EV APP+VVL+RVLRER LWDED ++ +V
Sbjct: 927 GWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKV 986
Query: 897 LEALMPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVR 956
+E L E+Y YV +SMAPHP RDFVVLR W++DLP+G C LVS S++ E+ GVR
Sbjct: 987 VETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVR 1046
Query: 957 ALMLTSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQA 1016
A+++ SQYL+EPCG G+SRLTHICR DL+G SP+WY+K FGHLCA EVA+IR+SF L A
Sbjct: 1047 AVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSFQPLIA 1106
Query: 1017 AGPETKL 1023
GPETK+
Sbjct: 1107 EGPETKI 1113
Score = 139 bits (351), Expect = 1e-32
Identities = 127/412 (30%), Positives = 181/412 (43%), Gaps = 84/412 (20%)
Query: 2 TLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLL-------- 53
TLN CASMKL+V+FQ K+ +DS+EE+ C IS+ W FQ+ S+ WS + L
Sbjct: 112 TLNKCASMKLDVNFQRKKGDDSDEEDLC-ISNKWTFQRTSRRWSRVDDLYTLLPRGDRNG 170
Query: 54 APPSPGLPATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRA----PSSSDRPLLSP 109
+P G+ T+S ESVLT+LS + I PG+ P D PL+S
Sbjct: 171 SPGGTGMRNTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSS 230
Query: 110 TQGQEG---------PQDKAKKRHRNRSFLKHLESLRRKEKSGSQQAEPK------HSPA 154
+ Q P+++ R R +SFLK +E+LR K G + + P
Sbjct: 231 SLPQPPRDVLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPM 290
Query: 155 TSEKVSKASSFR---------------SCRGFLSAGFYRAKNWAATSAGGSGANT----- 194
++ + + +CR L + + + SG +T
Sbjct: 291 LQQEPESFKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKE 350
Query: 195 RKAWEA------------------WPVAS--FRHPQWTHRGDCLVHVPGDHKPGTFPRSL 234
RK EA P A R ++ + + +VH+P DHKPGTFP++L
Sbjct: 351 RKCHEANKRGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKAL 410
Query: 235 SIESLCPEDGHRLADWQPGR----RWGCEGRR-----GSCGSTGSHASTYDNLPELYPAE 285
SIESL P D +W+ G R G R SC S S YDN+P +
Sbjct: 411 SIESLSPTDSSNGVNWRTGSISLGREQVPGAREPRLMASC-HRASRVSIYDNVPGSH--- 466
Query: 286 PVMVGAEAEDEDDEESGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGD 337
+ A D D E + HLDDILQHV GLQ+ V+ WS+ + P+L D
Sbjct: 467 ---LYASTGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHD 515
>gi|33188433 deleted in liver cancer 1 isoform 1 [Homo sapiens]
Length = 1528
Score = 653 bits (1684), Expect = 0.0
Identities = 335/577 (58%), Positives = 430/577 (74%), Gaps = 15/577 (2%)
Query: 449 SELDSSGNSMNEAEAAGPLAGLQASMPRERRDSGVGASLTRPCR-KLRWHSFQNSHRPSL 507
S+LDS+GNS+NE E + ERRDSGVGASLTR R +LRWHSFQ+SHRPSL
Sbjct: 962 SDLDSTGNSLNEPEEPSEIP--------ERRDSGVGASLTRSNRHRLRWHSFQSSHRPSL 1013
Query: 508 NSESLEINRQFAGQINLLHKGSLLRLTAFMEKYTVPHKQGWVWSMPKFMRRNKTPDYRGQ 567
NS SL+IN Q Q+NLL K SLL+LTA +EKYT +K G+ W++PKFM+R K PDY+ +
Sbjct: 1014 NSVSLQINCQSVAQMNLLQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDR 1073
Query: 568 HVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETSP 627
VFGVP ++VQRTGQPLPQSIQQAMRYLR+ CLDQVG+FRKSGVKSRIQ LRQMNE +
Sbjct: 1074 SVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAI 1133
Query: 628 DNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATLLL 687
D V YEGQSAYDVAD+LKQYFRDLPEP+ T+KL+ TFLQIYQ +PKDQ L A +AA +LL
Sbjct: 1134 DCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLL 1193
Query: 688 PDENREVLQTLLYFLSDI-ASAEENQMTAGNLAVCLAPSIFHLNVSKKDSPSPRIKSKRS 746
PDENREVLQTLLYFLSD+ A+ +ENQMT NLAVCLAPS+FHLN K+++ SPR+ ++
Sbjct: 1194 PDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQ 1253
Query: 747 LIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVPQDMVLQLCSSYSAAELSP-PGPALAE 805
+G+P +DL++N+AATQGL+HMI++CKKLFQVP++M + +SY+ EL P AL
Sbjct: 1254 SLGKPDQKDLNENLAATQGLAHMIAECKKLFQVPEEM-SRCRNSYTEQELKPLTLEALGH 1312
Query: 806 LRQAQAAGVSLSLYMEENIQDLLRDAAERFKGWMSVPGPQHTELACRKAPDGHPLRLWKA 865
L +A ++++ + L ++ E+FKGW+S + EL+ +K +G PLRLW++
Sbjct: 1313 LGNDDSA--DYQHFLQDCVDGLFKEVKEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRS 1370
Query: 866 STEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPGVELYHYVTDSMAPHPCRDFVVL 925
EV A P +L R+L+E+ LWD DLL ++V+E L E+Y YV +SMAPHP RD+VVL
Sbjct: 1371 VIEVPAVPEEILKRLLKEQHLWDVDLLDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVL 1430
Query: 926 RMWRSDLPRGGCLLVSQSLDPEQPVPESGVRALMLTSQYLMEPCGLGRSRLTHICRADLR 985
R WR++LP+G C L+ S+D ++ P GVR +L S+YL+EPCG G+S+LT++CR DLR
Sbjct: 1431 RTWRTNLPKGACALLLTSVDHDR-APVVGVRVNVLLSRYLIEPCGPGKSKLTYMCRVDLR 1489
Query: 986 GRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPETK 1022
G P+WY K FGHLCA EV KIRDSF +TK
Sbjct: 1490 GHMPEWYTKSFGHLCAAEVVKIRDSFSNQNTETKDTK 1526
Score = 69.7 bits (169), Expect = 1e-11
Identities = 60/187 (32%), Positives = 82/187 (43%), Gaps = 43/187 (22%)
Query: 2 TLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAP------ 55
TLN CA MKLE+ K+++DS+E+E C IS W FQ++SK WS + D+ +P
Sbjct: 505 TLNKCAVMKLEISPHRKRSDDSDEDEPCAISGKWTFQRDSKRWSRLEEFDVFSPKQDLVP 564
Query: 56 -----------PSPG-----LPATSSCESVLTELSATSLPVITVSLPPEPADLP------ 93
PSPG L SV + S SLP + + P E A P
Sbjct: 565 GSPDDSHPKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLP--SHAPPSEDAATPRTNSVI 622
Query: 94 -------LPGRAPS----SSDRPLLSPTQGQEGPQDKAKKRHRNRSFLKHLESLRRKEKS 142
L G S S + L S + +G + AK + RS LK +ESL+ K
Sbjct: 623 SVCSSSNLAGNDDSFGSLPSPKELSSFSFSMKGHEKTAKS--KTRSLLKRMESLKLKSSH 680
Query: 143 GSQQAEP 149
S+ P
Sbjct: 681 HSKHKAP 687
Score = 65.9 bits (159), Expect = 2e-10
Identities = 59/217 (27%), Positives = 85/217 (39%), Gaps = 45/217 (20%)
Query: 142 SGSQQAEPKHSPATSEKVSKASSFRSCR---GFLSAGFYRAKNWAATSAGGSGANTRKAW 198
S S Q+E + +T V++ S +C G GF + R+++
Sbjct: 742 SSSSQSETSSAVSTPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRESY 801
Query: 199 EAWPVASFRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLCPEDGHRLADWQPG----- 253
D + ++P DHKPGTFP++L+ S P + +W+ G
Sbjct: 802 PE---------------DTVFYIPEDHKPGTFPKALTNGSFSPSGNNGSVNWRTGSFHGP 846
Query: 254 -----RRWGCEG------RRGSCGSTGSHASTYDNLPE--LYPAEPVMVGAEAEDEDDEE 300
RR RR S S S S YDN+P LY + + E ED
Sbjct: 847 GHISLRRENSSDSPKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGDLADLENED----- 901
Query: 301 SGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGD 337
+ LDDIL HV G+Q+ V WS + D G D
Sbjct: 902 ---IFPELDDILYHVKGMQRIVNQWSE-KFSDEGDSD 934
>gi|33188437 deleted in liver cancer 1 isoform 2 [Homo sapiens]
Length = 1091
Score = 653 bits (1684), Expect = 0.0
Identities = 335/577 (58%), Positives = 430/577 (74%), Gaps = 15/577 (2%)
Query: 449 SELDSSGNSMNEAEAAGPLAGLQASMPRERRDSGVGASLTRPCR-KLRWHSFQNSHRPSL 507
S+LDS+GNS+NE E + ERRDSGVGASLTR R +LRWHSFQ+SHRPSL
Sbjct: 525 SDLDSTGNSLNEPEEPSEIP--------ERRDSGVGASLTRSNRHRLRWHSFQSSHRPSL 576
Query: 508 NSESLEINRQFAGQINLLHKGSLLRLTAFMEKYTVPHKQGWVWSMPKFMRRNKTPDYRGQ 567
NS SL+IN Q Q+NLL K SLL+LTA +EKYT +K G+ W++PKFM+R K PDY+ +
Sbjct: 577 NSVSLQINCQSVAQMNLLQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDR 636
Query: 568 HVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETSP 627
VFGVP ++VQRTGQPLPQSIQQAMRYLR+ CLDQVG+FRKSGVKSRIQ LRQMNE +
Sbjct: 637 SVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAI 696
Query: 628 DNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATLLL 687
D V YEGQSAYDVAD+LKQYFRDLPEP+ T+KL+ TFLQIYQ +PKDQ L A +AA +LL
Sbjct: 697 DCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLL 756
Query: 688 PDENREVLQTLLYFLSDI-ASAEENQMTAGNLAVCLAPSIFHLNVSKKDSPSPRIKSKRS 746
PDENREVLQTLLYFLSD+ A+ +ENQMT NLAVCLAPS+FHLN K+++ SPR+ ++
Sbjct: 757 PDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQ 816
Query: 747 LIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVPQDMVLQLCSSYSAAELSP-PGPALAE 805
+G+P +DL++N+AATQGL+HMI++CKKLFQVP++M + +SY+ EL P AL
Sbjct: 817 SLGKPDQKDLNENLAATQGLAHMIAECKKLFQVPEEM-SRCRNSYTEQELKPLTLEALGH 875
Query: 806 LRQAQAAGVSLSLYMEENIQDLLRDAAERFKGWMSVPGPQHTELACRKAPDGHPLRLWKA 865
L +A ++++ + L ++ E+FKGW+S + EL+ +K +G PLRLW++
Sbjct: 876 LGNDDSA--DYQHFLQDCVDGLFKEVKEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRS 933
Query: 866 STEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPGVELYHYVTDSMAPHPCRDFVVL 925
EV A P +L R+L+E+ LWD DLL ++V+E L E+Y YV +SMAPHP RD+VVL
Sbjct: 934 VIEVPAVPEEILKRLLKEQHLWDVDLLDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVL 993
Query: 926 RMWRSDLPRGGCLLVSQSLDPEQPVPESGVRALMLTSQYLMEPCGLGRSRLTHICRADLR 985
R WR++LP+G C L+ S+D ++ P GVR +L S+YL+EPCG G+S+LT++CR DLR
Sbjct: 994 RTWRTNLPKGACALLLTSVDHDR-APVVGVRVNVLLSRYLIEPCGPGKSKLTYMCRVDLR 1052
Query: 986 GRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPETK 1022
G P+WY K FGHLCA EV KIRDSF +TK
Sbjct: 1053 GHMPEWYTKSFGHLCAAEVVKIRDSFSNQNTETKDTK 1089
Score = 69.7 bits (169), Expect = 1e-11
Identities = 60/187 (32%), Positives = 82/187 (43%), Gaps = 43/187 (22%)
Query: 2 TLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAP------ 55
TLN CA MKLE+ K+++DS+E+E C IS W FQ++SK WS + D+ +P
Sbjct: 68 TLNKCAVMKLEISPHRKRSDDSDEDEPCAISGKWTFQRDSKRWSRLEEFDVFSPKQDLVP 127
Query: 56 -----------PSPG-----LPATSSCESVLTELSATSLPVITVSLPPEPADLP------ 93
PSPG L SV + S SLP + + P E A P
Sbjct: 128 GSPDDSHPKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLP--SHAPPSEDAATPRTNSVI 185
Query: 94 -------LPGRAPS----SSDRPLLSPTQGQEGPQDKAKKRHRNRSFLKHLESLRRKEKS 142
L G S S + L S + +G + AK + RS LK +ESL+ K
Sbjct: 186 SVCSSSNLAGNDDSFGSLPSPKELSSFSFSMKGHEKTAKS--KTRSLLKRMESLKLKSSH 243
Query: 143 GSQQAEP 149
S+ P
Sbjct: 244 HSKHKAP 250
Score = 65.9 bits (159), Expect = 2e-10
Identities = 59/217 (27%), Positives = 85/217 (39%), Gaps = 45/217 (20%)
Query: 142 SGSQQAEPKHSPATSEKVSKASSFRSCR---GFLSAGFYRAKNWAATSAGGSGANTRKAW 198
S S Q+E + +T V++ S +C G GF + R+++
Sbjct: 305 SSSSQSETSSAVSTPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRESY 364
Query: 199 EAWPVASFRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLCPEDGHRLADWQPG----- 253
D + ++P DHKPGTFP++L+ S P + +W+ G
Sbjct: 365 PE---------------DTVFYIPEDHKPGTFPKALTNGSFSPSGNNGSVNWRTGSFHGP 409
Query: 254 -----RRWGCEG------RRGSCGSTGSHASTYDNLPE--LYPAEPVMVGAEAEDEDDEE 300
RR RR S S S S YDN+P LY + + E ED
Sbjct: 410 GHISLRRENSSDSPKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGDLADLENED----- 464
Query: 301 SGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGD 337
+ LDDIL HV G+Q+ V WS + D G D
Sbjct: 465 ---IFPELDDILYHVKGMQRIVNQWSE-KFSDEGDSD 497
>gi|7382480 Rho GTPase activating protein 6 isoform 4 [Homo sapiens]
Length = 771
Score = 89.7 bits (221), Expect = 1e-17
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 24/211 (11%)
Query: 585 LPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLL 644
+P+ + ++L L VGIFR K R++ LR+ + D E S +DVA LL
Sbjct: 207 VPRLVDSCCQHLEKHGLQTVGIFRVGSSKKRVRQLREEFDRGIDVSLEEEHSVHDVAALL 266
Query: 645 KQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSD 704
K++ RD+P+P+ T +L T F+ L P++Q L Q LLP N + L LL FLS
Sbjct: 267 KEFLRDMPDPLLTRELYTAFINTLLLEPEEQ-LGTLQLLIYLLPPCNCDTLHRLLQFLSI 325
Query: 705 IASAEE------------NQMTAGNLAVCLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPG 752
+A + N+MT+ NLA P++ H S S + ++
Sbjct: 326 VARHADDNISKDGQEVTGNKMTSLNLATIFGPNLLHKQKSSDKEFSVQSSAR-------- 377
Query: 753 PRDLSDNMAATQGLSHMISDCKKLFQVPQDM 783
++ A + MI + + LF VP D+
Sbjct: 378 ---AEESTAIIAVVQKMIENYEALFMVPPDL 405
>gi|95091988 Rho GTPase activating protein 6 isoform 3 [Homo
sapiens]
Length = 765
Score = 89.7 bits (221), Expect = 1e-17
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 24/211 (11%)
Query: 585 LPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLL 644
+P+ + ++L L VGIFR K R++ LR+ + D E S +DVA LL
Sbjct: 410 VPRLVDSCCQHLEKHGLQTVGIFRVGSSKKRVRQLREEFDRGIDVSLEEEHSVHDVAALL 469
Query: 645 KQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSD 704
K++ RD+P+P+ T +L T F+ L P++Q L Q LLP N + L LL FLS
Sbjct: 470 KEFLRDMPDPLLTRELYTAFINTLLLEPEEQ-LGTLQLLIYLLPPCNCDTLHRLLQFLSI 528
Query: 705 IASAEE------------NQMTAGNLAVCLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPG 752
+A + N+MT+ NLA P++ H S S + ++
Sbjct: 529 VARHADDNISKDGQEVTGNKMTSLNLATIFGPNLLHKQKSSDKEFSVQSSAR-------- 580
Query: 753 PRDLSDNMAATQGLSHMISDCKKLFQVPQDM 783
++ A + MI + + LF VP D+
Sbjct: 581 ---AEESTAIIAVVQKMIENYEALFMVPPDL 608
>gi|95091875 Rho GTPase activating protein 6 isoform 1 [Homo
sapiens]
Length = 974
Score = 89.7 bits (221), Expect = 1e-17
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 24/211 (11%)
Query: 585 LPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLL 644
+P+ + ++L L VGIFR K R++ LR+ + D E S +DVA LL
Sbjct: 410 VPRLVDSCCQHLEKHGLQTVGIFRVGSSKKRVRQLREEFDRGIDVSLEEEHSVHDVAALL 469
Query: 645 KQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSD 704
K++ RD+P+P+ T +L T F+ L P++Q L Q LLP N + L LL FLS
Sbjct: 470 KEFLRDMPDPLLTRELYTAFINTLLLEPEEQ-LGTLQLLIYLLPPCNCDTLHRLLQFLSI 528
Query: 705 IASAEE------------NQMTAGNLAVCLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPG 752
+A + N+MT+ NLA P++ H S S + ++
Sbjct: 529 VARHADDNISKDGQEVTGNKMTSLNLATIFGPNLLHKQKSSDKEFSVQSSAR-------- 580
Query: 753 PRDLSDNMAATQGLSHMISDCKKLFQVPQDM 783
++ A + MI + + LF VP D+
Sbjct: 581 ---AEESTAIIAVVQKMIENYEALFMVPPDL 608
>gi|39932589 Rho GTPase activating protein 18 [Homo sapiens]
Length = 663
Score = 81.3 bits (199), Expect = 4e-15
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Query: 582 GQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETS--PDNVCYEGQSAYD 639
G +P Q+ + + + L+ G+ R G RI+NL Q E +E +D
Sbjct: 339 GMRIPLIFQKLISRIEERGLETEGLLRIPGAAIRIKNLCQELEAKFYEGTFNWESVKQHD 398
Query: 640 VADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLL 699
A LLK + R+LP+P+ + + F + L K Q L A +LLPD NR+ L+ LL
Sbjct: 399 AASLLKLFIRELPQPLLSVEYLKAFQAVQNLPTKKQQLQALNLLVILLPDANRDTLKALL 458
Query: 700 YFLSD-IASAEENQMTAGNLAVCLAPSIF 727
FL I + E+N+MT N+A+ +AP++F
Sbjct: 459 EFLQRVIDNKEKNKMTVMNVAMVMAPNLF 487
>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
Length = 2022
Score = 80.9 bits (198), Expect = 6e-15
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Query: 585 LPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLL 644
+P +++ + ++ L G++RKSG +R + LRQ +T P V E + + +L
Sbjct: 1712 VPIVLEKLLEHVEMHGLYTEGLYRKSGAANRTRELRQALQTDPAAVKLENFPIHAITGVL 1771
Query: 645 KQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSD 704
KQ+ R+LPEP+ T FL+ +L K + LAA A LP+ N L+ L++ L
Sbjct: 1772 KQWLRELPEPLMTFAQYGDFLRAVELPEKQEQLAAIYAVLEHLPEANHNSLERLIFHLVK 1831
Query: 705 IASAEE-NQMTAGNLAVCLAPSI 726
+A E+ N+M+ G LA+ AP +
Sbjct: 1832 VALLEDVNRMSPGALAIIFAPCL 1854
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 80.9 bits (198), Expect = 6e-15
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Query: 585 LPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLL 644
+P +++ + ++ L G++RKSG +R + LRQ +T P V E + + +L
Sbjct: 1712 VPIVLEKLLEHVEMHGLYTEGLYRKSGAANRTRELRQALQTDPAAVKLENFPIHAITGVL 1771
Query: 645 KQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSD 704
KQ+ R+LPEP+ T FL+ +L K + LAA A LP+ N L+ L++ L
Sbjct: 1772 KQWLRELPEPLMTFAQYGDFLRAVELPEKQEQLAAIYAVLEHLPEANHNSLERLIFHLVK 1831
Query: 705 IASAEE-NQMTAGNLAVCLAPSI 726
+A E+ N+M+ G LA+ AP +
Sbjct: 1832 VALLEDVNRMSPGALAIIFAPCL 1854
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 78.6 bits (192), Expect = 3e-14
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 1/159 (0%)
Query: 569 VFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETSPD 628
V+GV H+Q G+ + I+ + L S+ + + G+FR + S ++ L+Q + P
Sbjct: 273 VYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPH 332
Query: 629 NVCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATLLLP 688
++ + VA LK Y R+LPEP+ T L +++ L L A Q LP
Sbjct: 333 SLEEFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCSRLP 392
Query: 689 DENREVLQTLLYFLSDIASAEE-NQMTAGNLAVCLAPSI 726
EN L+ L+ FL+ +A +E N+MT N+A+ L P++
Sbjct: 393 PENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNL 431
Score = 35.4 bits (80), Expect = 0.28
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 322 VELWSRAMYPDLGPGDEEEEEATSSVEIATVEVKCQAEALSQM-EVPAHGE-----SPAW 375
+ L ++P GD+ + +A S +++++V EAL Q + G+ S +
Sbjct: 425 IVLGPNLLWPPEKEGDQAQLDAAS---VSSIQVVGVVEALIQSADTLFPGDINFNVSGLF 481
Query: 376 AQAEVQPAV---LAPAQAPAEAEPV-AQEEAEAPAPAPAPAPA 414
+ +Q V LA + P+ A P A A APAPAPAPAPA
Sbjct: 482 SAVTLQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPA 524
Score = 31.2 bits (69), Expect = 5.2
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 351 TVEVKCQAEALSQMEVPAHGESPAWAQAEVQPAVLAPAQAPAEAEPVAQEEAEAPAPAPA 410
TV + +E L VP +PA A A APA APA A +E E+ P P
Sbjct: 489 TVSDRLASEELPSTAVPTPATTPAPAPAP------APAPAPALASAATKERTESEVP-PR 541
Query: 411 PA 412
PA
Sbjct: 542 PA 543
>gi|156071465 Rho GTPase activating protein 4 [Homo sapiens]
Length = 946
Score = 77.4 bits (189), Expect = 6e-14
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 557 RRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRI 616
R+ + Q +FG +Q +GQP+P ++ +R++ L GIFR SG + R+
Sbjct: 492 RQPRPSSQYNQRLFGGDMEKFIQSSGQPVPLVVESCIRFINLNGLQHEGIFRVSGAQLRV 551
Query: 617 QNLRQMNETSPDNVCYEGQSAYD---VADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPK 673
+R E D + EG +A+D VA +LK YFR L P+F L L +L
Sbjct: 552 SEIRDAFERGEDPL-VEGCTAHDLDSVAGVLKLYFRSLEPPLFPPDLFGELLASSELEAT 610
Query: 674 DQWLAAAQAATLLLPDENREVLQTLLYFLSDIAS-AEENQMTAGNLAVCLAPSI 726
+ + LP VL+ L FL+ +A ++EN M NLAVC P++
Sbjct: 611 AERVEHVSRLLWRLPAPVLVVLRYLFTFLNHLAQYSDENMMDPYNLAVCFGPTL 664
>gi|40255080 hypothetical protein LOC158763 [Homo sapiens]
Length = 547
Score = 76.3 bits (186), Expect = 1e-13
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 25/234 (10%)
Query: 566 GQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNET 625
GQ + G + + + +PQ ++ +++ L VGIF R++ LR+ +
Sbjct: 216 GQRLLGSKRKMSLNPIAKQIPQVVEACCQFIEKHGLSAVGIFTLEYSVQRVRQLREEFDQ 275
Query: 626 SPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATL 685
D V + Q+ +DVA LLK++FRD+ + + L +FL L P+DQ L+A Q
Sbjct: 276 GLDVVLDDNQNVHDVAALLKEFFRDMKDSLLPDDLYMSFLLTATLKPQDQ-LSALQLLVY 334
Query: 686 LLPDENREVLQTLLYFLSDIASAEE------------NQMTAGNLAVCLAPSIFHLNVSK 733
L+P + + L+ LL L I E N+MT+ NLA+ +F + K
Sbjct: 335 LMPPCHSDTLERLLKALHKITENCEDSIGIDGQLVPGNRMTSTNLAL-----VFGSALLK 389
Query: 734 KDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVPQDMVLQL 787
K R +S+++ +G + +A+ + MI + LFQVP + Q+
Sbjct: 390 KGKFGKR-ESRKTKLG------IDHYVASVNVVRAMIDNWDVLFQVPPHIQRQV 436
>gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo
sapiens]
Length = 1499
Score = 75.9 bits (185), Expect = 2e-13
Identities = 69/297 (23%), Positives = 140/297 (47%), Gaps = 20/297 (6%)
Query: 457 SMNEAEAAGPLAGLQASMPRERRDSGVGASL--------TRPCRKLRWHSFQNSHRPSLN 508
++N+A++ G G + M + G S+ TR R R+ S++ S +
Sbjct: 1121 NINKAQSNGSGNGSDSEMDTSSLERGRKVSIVSKPVLYRTRCTRLGRFASYRTSFSVGSD 1180
Query: 509 SESLEINRQFAGQINLLHKGSLLRLTAFMEKYTVPHKQGWVWSMPKFMRRNK-------T 561
E I ++ Q + +KG + E P ++ + S+ + ++ K T
Sbjct: 1181 DELGPIRKKEEDQASQGYKGDNAVIP--YETDEDPRRRNILRSLRRNTKKPKPKPRPSIT 1238
Query: 562 PDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNL-R 620
+ FGVP L V +P+P I++ + Y+ + L GI+R SG KS +++L R
Sbjct: 1239 KATWESNYFGVP-LTTVVTPEKPIPIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQR 1297
Query: 621 QMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAA 680
Q ++ ++ + + VA +K +F +LP+P+ + ++ +++ ++Q L A
Sbjct: 1298 QFDQDHNLDLAEKDFTVNTVAGAMKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHAL 1357
Query: 681 QAATLLLPDENREVLQTLLYFLSDIA-SAEENQMTAGNLAVCLAPSIFHLNVSKKDS 736
+ P EN EV + ++ L+ ++ + + N MT+ NL++C P++ + S D+
Sbjct: 1358 KEVLKKFPKENHEVFKYVISHLNKVSHNNKVNLMTSENLSICFWPTLMRPDFSTMDA 1414
>gi|59710113 Rho GTPase activating protein 28 isoform a [Homo
sapiens]
Length = 570
Score = 75.9 bits (185), Expect = 2e-13
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 529 SLLRLTAFMEKYTVPHKQGWVWSMPKFMRRNKTPDYRGQH--VFGVPPLIHV-----QRT 581
SL+ LTAF + + + ++RNKT +G+ +FGVP + + +
Sbjct: 188 SLIELTAFFDAFGIQ------------LKRNKTEKVKGRDNGIFGVPLTVLLDGDRKKDP 235
Query: 582 GQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNET--SPDNVCYEGQSAYD 639
G +P +Q+ + L+ GIFR SG ++++ R+ + + D ++ +
Sbjct: 236 GVKVPLVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAKFNADKFKWDKMCHRE 295
Query: 640 VADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQ-WLAAAQAATLLLPDENREVLQTL 698
A +LK +FR+LP +F + F+ + + P + A + LPD NR+ Q L
Sbjct: 296 AAVMLKAFFRELPTSLFPVEYIPAFISLMERGPHVKVQFQALHLMVMALPDANRDAAQAL 355
Query: 699 LYFLSD-IASAEENQMTAGNLAVCLAPSIF 727
+ F + IA+ +N+M+ N++ +AP++F
Sbjct: 356 MTFFNKVIANESKNRMSLWNISTVMAPNLF 385
>gi|59710111 Rho GTPase activating protein 28 isoform b [Homo
sapiens]
Length = 563
Score = 75.9 bits (185), Expect = 2e-13
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 529 SLLRLTAFMEKYTVPHKQGWVWSMPKFMRRNKTPDYRGQH--VFGVPPLIHV-----QRT 581
SL+ LTAF + + + ++RNKT +G+ +FGVP + + +
Sbjct: 188 SLIELTAFFDAFGIQ------------LKRNKTEKVKGRDNGIFGVPLTVLLDGDRKKDP 235
Query: 582 GQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNET--SPDNVCYEGQSAYD 639
G +P +Q+ + L+ GIFR SG ++++ R+ + + D ++ +
Sbjct: 236 GVKVPLVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAKFNADKFKWDKMCHRE 295
Query: 640 VADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQ-WLAAAQAATLLLPDENREVLQTL 698
A +LK +FR+LP +F + F+ + + P + A + LPD NR+ Q L
Sbjct: 296 AAVMLKAFFRELPTSLFPVEYIPAFISLMERGPHVKVQFQALHLMVMALPDANRDAAQAL 355
Query: 699 LYFLSD-IASAEENQMTAGNLAVCLAPSIF 727
+ F + IA+ +N+M+ N++ +AP++F
Sbjct: 356 MTFFNKVIANESKNRMSLWNISTVMAPNLF 385
>gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Homo
sapiens]
Length = 622
Score = 73.9 bits (180), Expect = 7e-13
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 10/182 (5%)
Query: 556 MRRNKTPDYRGQH--VFGVP--PLIHVQRTGQP---LPQSIQQAMRYLRSQCLDQVGIFR 608
++R+K ++ +FGVP L+ P +P +Q + L + LD GI R
Sbjct: 252 LKRSKAGKWKAAETRLFGVPLDSLLEADHKVLPSTQVPLVLQALLSCLEKRGLDMEGILR 311
Query: 609 KSGVKSRIQNLRQMNETSPDNVCYEGQSAY--DVADLLKQYFRDLPEPIFTSKLTTTFLQ 666
G ++R++ L Q E + + D +DLLK++ R LP P+ T++ F
Sbjct: 312 VPGSQARVKGLEQKLERDFYAGLFSWDEVHHNDASDLLKRFIRKLPTPLLTAEYLPAFAV 371
Query: 667 IYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIASAEE-NQMTAGNLAVCLAPS 725
+ + Q L L+LP+ NR L+ LL FL + + E+ N+MT N++ +AP+
Sbjct: 372 VPNIPNLKQRLQVLHLLILILPEPNRNALKALLEFLRKVVAREQHNKMTLRNVSTVMAPN 431
Query: 726 IF 727
+F
Sbjct: 432 LF 433
>gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Homo
sapiens]
Length = 622
Score = 73.9 bits (180), Expect = 7e-13
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 10/182 (5%)
Query: 556 MRRNKTPDYRGQH--VFGVP--PLIHVQRTGQP---LPQSIQQAMRYLRSQCLDQVGIFR 608
++R+K ++ +FGVP L+ P +P +Q + L + LD GI R
Sbjct: 252 LKRSKAGKWKAAETRLFGVPLDSLLEADHKVLPSTQVPLVLQALLSCLEKRGLDMEGILR 311
Query: 609 KSGVKSRIQNLRQMNETSPDNVCYEGQSAY--DVADLLKQYFRDLPEPIFTSKLTTTFLQ 666
G ++R++ L Q E + + D +DLLK++ R LP P+ T++ F
Sbjct: 312 VPGSQARVKGLEQKLERDFYAGLFSWDEVHHNDASDLLKRFIRKLPTPLLTAEYLPAFAV 371
Query: 667 IYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIASAEE-NQMTAGNLAVCLAPS 725
+ + Q L L+LP+ NR L+ LL FL + + E+ N+MT N++ +AP+
Sbjct: 372 VPNIPNLKQRLQVLHLLILILPEPNRNALKALLEFLRKVVAREQHNKMTLRNVSTVMAPN 431
Query: 726 IF 727
+F
Sbjct: 432 LF 433
>gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [Homo
sapiens]
Length = 622
Score = 73.9 bits (180), Expect = 7e-13
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 10/182 (5%)
Query: 556 MRRNKTPDYRGQH--VFGVP--PLIHVQRTGQP---LPQSIQQAMRYLRSQCLDQVGIFR 608
++R+K ++ +FGVP L+ P +P +Q + L + LD GI R
Sbjct: 252 LKRSKAGKWKAAETRLFGVPLDSLLEADHKVLPSTQVPLVLQALLSCLEKRGLDMEGILR 311
Query: 609 KSGVKSRIQNLRQMNETSPDNVCYEGQSAY--DVADLLKQYFRDLPEPIFTSKLTTTFLQ 666
G ++R++ L Q E + + D +DLLK++ R LP P+ T++ F
Sbjct: 312 VPGSQARVKGLEQKLERDFYAGLFSWDEVHHNDASDLLKRFIRKLPTPLLTAEYLPAFAV 371
Query: 667 IYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIASAEE-NQMTAGNLAVCLAPS 725
+ + Q L L+LP+ NR L+ LL FL + + E+ N+MT N++ +AP+
Sbjct: 372 VPNIPNLKQRLQVLHLLILILPEPNRNALKALLEFLRKVVAREQHNKMTLRNVSTVMAPN 431
Query: 726 IF 727
+F
Sbjct: 432 LF 433
>gi|156119615 myosin IXA [Homo sapiens]
Length = 2548
Score = 73.2 bits (178), Expect = 1e-12
Identities = 47/158 (29%), Positives = 83/158 (52%), Gaps = 2/158 (1%)
Query: 570 FGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETSPDN 629
FGV L + + +P +++ + Y+ L GI+RKSG ++I+ LRQ +T ++
Sbjct: 2061 FGVE-LSRLTSEDRTVPLVVEKLINYIEMHGLYTEGIYRKSGSTNKIKELRQGLDTDAES 2119
Query: 630 VCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATLLLPD 689
V + + + +A + KQ+ RDLP P+ T +L FL+ L + + + + L
Sbjct: 2120 VNLDDYNIHVIASVFKQWLRDLPNPLMTFELYEEFLRAMGLQERKETIRGVYSVIDQLSR 2179
Query: 690 ENREVLQTLLYFLSDIASAEE-NQMTAGNLAVCLAPSI 726
+ L+ L++ L IA E+ N+M+A LA+ AP I
Sbjct: 2180 THLNTLERLIFHLVRIALQEDTNRMSANALAIVFAPCI 2217
>gi|71040096 Rho GTPase activating protein 30 isoform 2 [Homo
sapiens]
Length = 890
Score = 71.2 bits (173), Expect = 5e-12
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 554 KFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVK 613
K ++ K + VFG H+Q +GQ +PQ ++ ++ + GI+R SGV
Sbjct: 2 KSRQKGKKKGSAKERVFGCDLQEHLQHSGQEVPQVLKSCAEFVEEYGVVD-GIYRLSGVS 60
Query: 614 SRIQNLRQM--NETSPD---NVCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIY 668
S IQ LRQ +E PD +V Q + V+ L K YFR+LP+P+ T +L F +
Sbjct: 61 SNIQKLRQEFESERKPDLRRDVYL--QDIHCVSSLCKAYFRELPDPLLTYRLYDKFAEAV 118
Query: 669 QLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIAS-AEENQMTAGNLAVCLAPSI 726
+ + + L LP N L+ L+ L +AS + + M A NLA+ AP++
Sbjct: 119 GVQLEPERLVKILEVLRELPVPNYRTLEFLMRHLVHMASFSAQTNMHARNLAIVWAPNL 177
>gi|71040098 Rho GTPase activating protein 30 isoform 1 [Homo
sapiens]
Length = 1101
Score = 71.2 bits (173), Expect = 5e-12
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 554 KFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVK 613
K ++ K + VFG H+Q +GQ +PQ ++ ++ + GI+R SGV
Sbjct: 2 KSRQKGKKKGSAKERVFGCDLQEHLQHSGQEVPQVLKSCAEFVEEYGVVD-GIYRLSGVS 60
Query: 614 SRIQNLRQM--NETSPD---NVCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIY 668
S IQ LRQ +E PD +V Q + V+ L K YFR+LP+P+ T +L F +
Sbjct: 61 SNIQKLRQEFESERKPDLRRDVYL--QDIHCVSSLCKAYFRELPDPLLTYRLYDKFAEAV 118
Query: 669 QLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIAS-AEENQMTAGNLAVCLAPSI 726
+ + + L LP N L+ L+ L +AS + + M A NLA+ AP++
Sbjct: 119 GVQLEPERLVKILEVLRELPVPNYRTLEFLMRHLVHMASFSAQTNMHARNLAIVWAPNL 177
>gi|7661858 Rho GTPase activating protein 11A isoform 1 [Homo
sapiens]
Length = 1023
Score = 70.5 bits (171), Expect = 8e-12
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 566 GQHVFGVP----PLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQ 621
G +FGVP P V G +P + A L + G+FRKSG R++ L+
Sbjct: 43 GGKIFGVPFNALPHSAVPEYGH-IPSFLVDACTSLEDH-IHTEGLFRKSGSVIRLKALK- 99
Query: 622 MNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQ 681
N+ C D+A LLKQ+FR+LPEPI + L L+ QL +++ A
Sbjct: 100 -NKVDHGEGCLSSAPPCDIAGLLKQFFRELPEPILPADLHEALLKAQQLGTEEK-NKATL 157
Query: 682 AATLLLPDENREVLQTLLYFLSDIA-SAEENQMTAGNLAVCLAPSIFHLNVSKKDSPSPR 740
+ LL D VL+ FL +++ + EN+M + NLAV AP++ + + S
Sbjct: 158 LLSCLLADHTVHVLRYFFNFLRNVSLRSSENKMDSSNLAVIFAPNLLQTSEGHEKMSSNT 217
Query: 741 IKSKR 745
K R
Sbjct: 218 EKKLR 222
>gi|40788018 Rho GTPase activating protein 11A isoform 2 [Homo
sapiens]
Length = 501
Score = 70.5 bits (171), Expect = 8e-12
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 566 GQHVFGVP----PLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQ 621
G +FGVP P V G +P + A L + G+FRKSG R++ L+
Sbjct: 43 GGKIFGVPFNALPHSAVPEYGH-IPSFLVDACTSLEDH-IHTEGLFRKSGSVIRLKALK- 99
Query: 622 MNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQ 681
N+ C D+A LLKQ+FR+LPEPI + L L+ QL +++ A
Sbjct: 100 -NKVDHGEGCLSSAPPCDIAGLLKQFFRELPEPILPADLHEALLKAQQLGTEEK-NKATL 157
Query: 682 AATLLLPDENREVLQTLLYFLSDIA-SAEENQMTAGNLAVCLAPSIFHLNVSKKDSPSPR 740
+ LL D VL+ FL +++ + EN+M + NLAV AP++ + + S
Sbjct: 158 LLSCLLADHTVHVLRYFFNFLRNVSLRSSENKMDSSNLAVIFAPNLLQTSEGHEKMSSNT 217
Query: 741 IKSKR 745
K R
Sbjct: 218 EKKLR 222
>gi|82546845 breakpoint cluster region isoform 2 [Homo sapiens]
Length = 1227
Score = 70.1 bits (170), Expect = 1e-11
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 5/183 (2%)
Query: 560 KTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNL 619
+ P + VFGV + +R +P ++Q + + + +++VGI+R SGV + IQ L
Sbjct: 998 RMPSRKQTGVFGVKIAVVTKRERSKVPYIVRQCVEEIERRGMEEVGIYRVSGVATDIQAL 1057
Query: 620 RQMNETSPD--NVCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWL 677
+ + + +V +A LK YFR+LPEP+FT + F + L
Sbjct: 1058 KAAFDVNNKDVSVMMSEMDVNAIAGTLKLYFRELPEPLFTDEFYPNFAEGIALSDPVAKE 1117
Query: 678 AAAQAATLLLPDENREVLQTLLYFLSDIASAEE-NQMTAGNLAVCLAPSIFHLNVSKKDS 736
+ L LP+ N LL L +A E N+M+ NLA P++ L S+K+S
Sbjct: 1118 SCMLNLLLSLPEANLLTFLFLLDHLKRVAEKEAVNKMSLHNLATVFGPTL--LRPSEKES 1175
Query: 737 PSP 739
P
Sbjct: 1176 KLP 1178
Score = 34.3 bits (77), Expect = 0.62
Identities = 46/178 (25%), Positives = 63/178 (35%), Gaps = 21/178 (11%)
Query: 323 ELWSRAMYPDLGP--------GDEEEEEATSSVEIATVEVKCQAEALSQMEVPAHGESPA 374
E W +A +PD P GD E+E I +E + E + +
Sbjct: 9 EAW-KAQFPDSEPPRMELRSVGDIEQELERCKASIRRLEQEVNQERFRMIYLQTLLAKEK 67
Query: 375 WAQAEVQPAVLAPAQAPAEA-EPVAQEEAEAPAPAPAPAPAQDSEQEAHSGGEPTFASSL 433
+ + AQAP A EP A PAPA P E EA GE S
Sbjct: 68 KSYDRQRWGFRRAAQAPDGASEPRASASRPQPAPADGADPPPAEEPEARPDGE---GSPG 124
Query: 434 SVEEGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRERRDSG-VGASLTRP 490
G + A+S E D G +A L+++ R R+ G GA +P
Sbjct: 125 KARPGTARRPGAAASGERDDRG-------PPASVAALRSNFERIRKGHGQPGADAEKP 175
>gi|82546843 breakpoint cluster region isoform 1 [Homo sapiens]
Length = 1271
Score = 70.1 bits (170), Expect = 1e-11
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 5/183 (2%)
Query: 560 KTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNL 619
+ P + VFGV + +R +P ++Q + + + +++VGI+R SGV + IQ L
Sbjct: 1042 RMPSRKQTGVFGVKIAVVTKRERSKVPYIVRQCVEEIERRGMEEVGIYRVSGVATDIQAL 1101
Query: 620 RQMNETSPD--NVCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWL 677
+ + + +V +A LK YFR+LPEP+FT + F + L
Sbjct: 1102 KAAFDVNNKDVSVMMSEMDVNAIAGTLKLYFRELPEPLFTDEFYPNFAEGIALSDPVAKE 1161
Query: 678 AAAQAATLLLPDENREVLQTLLYFLSDIASAEE-NQMTAGNLAVCLAPSIFHLNVSKKDS 736
+ L LP+ N LL L +A E N+M+ NLA P++ L S+K+S
Sbjct: 1162 SCMLNLLLSLPEANLLTFLFLLDHLKRVAEKEAVNKMSLHNLATVFGPTL--LRPSEKES 1219
Query: 737 PSP 739
P
Sbjct: 1220 KLP 1222
Score = 34.3 bits (77), Expect = 0.62
Identities = 46/178 (25%), Positives = 63/178 (35%), Gaps = 21/178 (11%)
Query: 323 ELWSRAMYPDLGP--------GDEEEEEATSSVEIATVEVKCQAEALSQMEVPAHGESPA 374
E W +A +PD P GD E+E I +E + E + +
Sbjct: 9 EAW-KAQFPDSEPPRMELRSVGDIEQELERCKASIRRLEQEVNQERFRMIYLQTLLAKEK 67
Query: 375 WAQAEVQPAVLAPAQAPAEA-EPVAQEEAEAPAPAPAPAPAQDSEQEAHSGGEPTFASSL 433
+ + AQAP A EP A PAPA P E EA GE S
Sbjct: 68 KSYDRQRWGFRRAAQAPDGASEPRASASRPQPAPADGADPPPAEEPEARPDGE---GSPG 124
Query: 434 SVEEGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRERRDSG-VGASLTRP 490
G + A+S E D G +A L+++ R R+ G GA +P
Sbjct: 125 KARPGTARRPGAAASGERDDRG-------PPASVAALRSNFERIRKGHGQPGADAEKP 175
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,376,644
Number of Sequences: 37866
Number of extensions: 2381697
Number of successful extensions: 19058
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 466
Number of HSP's that attempted gapping in prelim test: 15207
Number of HSP's gapped (non-prelim): 3228
length of query: 1023
length of database: 18,247,518
effective HSP length: 112
effective length of query: 911
effective length of database: 14,006,526
effective search space: 12759945186
effective search space used: 12759945186
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.