Guide to the Human Genome
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Name: C20orf95 Sequence: fasta or formatted (622aa) NCBI GI: 239752003
Description:

PREDICTED: chromosome 20 open reading frame 95

Referenced in:

Rho and Rac

Other entries for this name:
alt mRNA [622aa] PREDICTED: Rho GTPase-activating protein 18-like
alt mRNA [622aa] PREDICTED: chromosome 20 open reading frame 95
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         47           2
 C cysteine            1.0          6           1
 D aspartate           5.8         36           1
 E glutamate           6.6         41           2
 F phenylalanine       2.4         15           1
 G glycine             7.7         48           2
 H histidine           2.7         17           2
 I isoleucine          2.4         15           1
 K lysine              5.9         37           1
 L leucine            14.5         90           3
 M methionine          2.3         14           1
 N asparagine          3.1         19           1
 P proline             5.8         36           2
 Q glutamine           5.6         35           2
 R arginine            6.6         41           2
 S serine              7.1         44           3
 T threonine           3.7         23           1
 V valine              6.6         41           2
 W tryptophan          1.4          9           1
 Y tyrosine            1.3          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: chromosome 20 open reading frame 95 [Hom... 
C20orf95              1.000   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              1.000   PREDICTED: Rho GTPase-activating protein 18-like [H...
ARHGAP18              0.320   Rho GTPase activating protein 18 
ARHGAP28              0.228   Rho GTPase activating protein 28 isoform a 
ARHGAP28              0.188   Rho GTPase activating protein 28 isoform b 
STARD13               0.055   StAR-related lipid transfer (START) domain containin...
STARD13               0.055   StAR-related lipid transfer (START) domain containin...
STARD13               0.055   StAR-related lipid transfer (START) domain containin...
ARHGAP23              0.053   Rho GTPase activating protein 23 
DLC1                  0.052   deleted in liver cancer 1 isoform 1 
DLC1                  0.052   deleted in liver cancer 1 isoform 2 
ARHGAP19              0.051   Rho GTPase activating protein 19 
SYDE1                 0.051   synapse defective 1, Rho GTPase, homolog 1 
ARHGAP6               0.051   Rho GTPase activating protein 6 isoform 4 
ARHGAP6               0.051   Rho GTPase activating protein 6 isoform 3 
ARHGAP6               0.051   Rho GTPase activating protein 6 isoform 1 
ARHGAP9               0.050   Rho GTPase activating protein 9 isoform 1 
ARHGAP9               0.050   Rho GTPase activating protein 9 isoform 3 
BCR                   0.049   breakpoint cluster region isoform 2 
BCR                   0.049   breakpoint cluster region isoform 1 
ARHGAP27              0.049   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.049   Rho GTPase activating protein 27 isoform a 
ARHGAP21              0.048   Rho GTPase activating protein 21 
ABR                   0.047   active breakpoint cluster region-related  protein i...
ABR                   0.047   active breakpoint cluster region-related  protein is...
ABR                   0.047   active breakpoint cluster region-related  protein is...
ARAP3                 0.047   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
RALBP1                0.046   ralA binding protein 1 
ARHGAP15              0.045   ARHGAP15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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