Guide to the Human Genome
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Name: ARHGAP11A Sequence: fasta or formatted (501aa) NCBI GI: 40788018
Description:

Rho GTPase activating protein 11A isoform 2

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [1023aa] Rho GTPase activating protein 11A isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         29           2
 C cysteine            2.0         10           1
 D aspartate           3.6         18           1
 E glutamate           6.6         33           2
 F phenylalanine       4.6         23           2
 G glycine             7.4         37           2
 H histidine           3.2         16           1
 I isoleucine          4.8         24           1
 K lysine              7.8         39           2
 L leucine            11.2         56           3
 M methionine          0.8          4           1
 N asparagine          4.6         23           1
 P proline             5.4         27           2
 Q glutamine           3.0         15           2
 R arginine            6.6         33           3
 S serine             10.0         50           3
 T threonine           4.4         22           1
 V valine              6.2         31           2
 W tryptophan          0.4          2           1
 Y tyrosine            1.8          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase activating protein 11A isoform 2 
ARHGAP11A             0.985   Rho GTPase activating protein 11A isoform 1 
ARHGAP11B             0.423   Rho GTPase activating protein 11B 
ARHGAP22              0.061   Rho GTPase activating protein 2 
SRGAP2                0.061   SLIT-ROBO Rho GTPase activating protein 2 isoform a...
SRGAP2                0.061   SLIT-ROBO Rho GTPase activating protein 2 isoform b...
GMIP                  0.058   GEM interacting protein 
ARHGAP4               0.058   Rho GTPase activating protein 4 
ARHGAP1               0.057   Rho GTPase activating protein 1 
ARHGAP6               0.057   Rho GTPase activating protein 6 isoform 4 
ARHGAP6               0.057   Rho GTPase activating protein 6 isoform 3 
ARHGAP6               0.057   Rho GTPase activating protein 6 isoform 1 
RICH2                 0.055   Rho GTPase-activating protein RICH2 
C20orf95              0.055   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.055   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.055   PREDICTED: Rho GTPase-activating protein 18-like [H...
ARHGAP18              0.054   Rho GTPase activating protein 18 
DLC1                  0.053   deleted in liver cancer 1 isoform 1 
DLC1                  0.053   deleted in liver cancer 1 isoform 2 
LOC553158             0.051   PRR5-ARHGAP8 fusion protein 
SRGAP1                0.051   SLIT-ROBO Rho GTPase activating protein 1 
ARHGAP17              0.051   nadrin isoform 2 
ARHGAP8               0.051   Rho GTPase activating protein 8 isoform 2 
ARHGAP8               0.051   Rho GTPase activating protein 8 isoform 1 
ARHGAP17              0.050   nadrin isoform 1 
SRGAP3                0.050   SLIT-ROBO Rho GTPase activating protein 3 isoform a ...
FAM13A                0.047   family with sequence similarity 13, member A1 isofor...
ARHGAP24              0.047   Rho GTPase activating protein 24 isoform 3 
ARHGAP24              0.047   Rho GTPase activating protein 24 isoform 1 
SRGAP3                0.047   SLIT-ROBO Rho GTPase activating protein 3 isoform b ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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