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Search of human proteins with 21536367
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21536367 TBP-associated factor 1C isoform 2 [Homo sapiens]
(775 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21536367 TBP-associated factor 1C isoform 2 [Homo sapiens] 1598 0.0
gi|21536369 TBP-associated factor 1C isoform 1 [Homo sapiens] 1578 0.0
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 44 6e-04
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 44 6e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 43 0.001
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 42 0.003
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 41 0.005
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 41 0.005
gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo... 40 0.006
gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo ... 40 0.006
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens] 40 0.008
gi|10864075 regulator of G-protein signalling 3 isoform 2 [Homo ... 39 0.014
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 39 0.018
gi|116284392 mucin 2 precursor [Homo sapiens] 39 0.024
gi|153792074 proline rich 12 [Homo sapiens] 39 0.024
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 38 0.031
gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap... 38 0.031
gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sap... 38 0.031
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 38 0.041
gi|188536004 zinc finger protein 469 [Homo sapiens] 37 0.053
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 37 0.053
gi|54860079 nadrin isoform 1 [Homo sapiens] 37 0.053
gi|54860105 nadrin isoform 2 [Homo sapiens] 37 0.053
gi|89941470 ankyrin repeat domain 34 [Homo sapiens] 37 0.053
gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens] 37 0.070
gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens] 37 0.070
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 37 0.070
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 37 0.070
gi|24308394 hypothetical protein LOC140893 [Homo sapiens] 37 0.070
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 37 0.091
>gi|21536367 TBP-associated factor 1C isoform 2 [Homo sapiens]
Length = 775
Score = 1598 bits (4139), Expect = 0.0
Identities = 775/775 (100%), Positives = 775/775 (100%)
Query: 1 MLPPLIDPWDPGLTARDLLFRGGCRYRKRPRVVLDVTEQISRFLLDHGDVAFAPLGKLML 60
MLPPLIDPWDPGLTARDLLFRGGCRYRKRPRVVLDVTEQISRFLLDHGDVAFAPLGKLML
Sbjct: 1 MLPPLIDPWDPGLTARDLLFRGGCRYRKRPRVVLDVTEQISRFLLDHGDVAFAPLGKLML 60
Query: 61 ENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGGPILGTSVA 120
ENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGGPILGTSVA
Sbjct: 61 ENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGGPILGTSVA 120
Query: 121 SHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDRLHFQEVVL 180
SHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDRLHFQEVVL
Sbjct: 121 SHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDRLHFQEVVL 180
Query: 181 TPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGETLLAVRSDYHCAVWKFGKQWQPTLLQAM 240
TPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGETLLAVRSDYHCAVWKFGKQWQPTLLQAM
Sbjct: 181 TPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGETLLAVRSDYHCAVWKFGKQWQPTLLQAM 240
Query: 241 QVEKGATGISLSPHLPGELAICSRSGAVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADF 300
QVEKGATGISLSPHLPGELAICSRSGAVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADF
Sbjct: 241 QVEKGATGISLSPHLPGELAICSRSGAVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADF 300
Query: 301 TAHPRVLTVGDRTGVKMLDTQGPPGCGLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLP 360
TAHPRVLTVGDRTGVKMLDTQGPPGCGLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLP
Sbjct: 301 TAHPRVLTVGDRTGVKMLDTQGPPGCGLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLP 360
Query: 361 PTLHLVCTQFSLYLVDERLPLVPMLKWNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQ 420
PTLHLVCTQFSLYLVDERLPLVPMLKWNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQ
Sbjct: 361 PTLHLVCTQFSLYLVDERLPLVPMLKWNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQ 420
Query: 421 LQLLHLAEGASVPRLAGPPQSLPSRIDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPP 480
LQLLHLAEGASVPRLAGPPQSLPSRIDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPP
Sbjct: 421 LQLLHLAEGASVPRLAGPPQSLPSRIDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPP 480
Query: 481 LPSAPTPGLVLFQLSAAGDVFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTA 540
LPSAPTPGLVLFQLSAAGDVFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTA
Sbjct: 481 LPSAPTPGLVLFQLSAAGDVFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTA 540
Query: 541 GCSQWLKALLKVPLAPPVWTAPTFTHRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQ 600
GCSQWLKALLKVPLAPPVWTAPTFTHRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQ
Sbjct: 541 GCSQWLKALLKVPLAPPVWTAPTFTHRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQ 600
Query: 601 RDLGSLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRT 660
RDLGSLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRT
Sbjct: 601 RDLGSLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRT 660
Query: 661 QLSSSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQM 720
QLSSSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQM
Sbjct: 661 QLSSSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQM 720
Query: 721 LRDYMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLRKKPRMGF 775
LRDYMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLRKKPRMGF
Sbjct: 721 LRDYMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLRKKPRMGF 775
>gi|21536369 TBP-associated factor 1C isoform 1 [Homo sapiens]
Length = 869
Score = 1578 bits (4086), Expect = 0.0
Identities = 774/802 (96%), Positives = 775/802 (96%), Gaps = 27/802 (3%)
Query: 1 MLPPLIDPWDPGLTARDLLFRGGCRYRKRPRVVLDVTEQISRFLLDHGDVAFAPLGKLML 60
MLPPLIDPWDPGLTARDLLFRGGCRYRKRPRVVLDVTEQISRFLLDHGDVAFAPLGKLML
Sbjct: 68 MLPPLIDPWDPGLTARDLLFRGGCRYRKRPRVVLDVTEQISRFLLDHGDVAFAPLGKLML 127
Query: 61 ENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGGPILGTSVA 120
ENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGGPILGTSVA
Sbjct: 128 ENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGGPILGTSVA 187
Query: 121 SHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDRLHFQEVVL 180
SHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDRLHFQEVVL
Sbjct: 188 SHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDRLHFQEVVL 247
Query: 181 TPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGET--------------------------L 214
TPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGE+ L
Sbjct: 248 TPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGESKALIYTFLPHWLTCYLTPGPFHPSSAL 307
Query: 215 LAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSGAVCLWSPE 274
LAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSGAVCLWSPE
Sbjct: 308 LAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSGAVCLWSPE 367
Query: 275 DGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGCGLLLFRLG 334
DGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGCGLLLFRLG
Sbjct: 368 DGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGCGLLLFRLG 427
Query: 335 AEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLKWNHGLPSP 394
AEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLKWNHGLPSP
Sbjct: 428 AEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLKWNHGLPSP 487
Query: 395 LLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLA-EGASVPRLAGPPQSLPSRIDSLPAFP 453
LLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLA EGASVPRLAGPPQSLPSRIDSLPAFP
Sbjct: 488 LLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAGEGASVPRLAGPPQSLPSRIDSLPAFP 547
Query: 454 LLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQLRPQVDSSL 513
LLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQLRPQVDSSL
Sbjct: 548 LLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQLRPQVDSSL 607
Query: 514 RRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFTHRQMLGST 573
RRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFTHRQMLGST
Sbjct: 608 RRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFTHRQMLGST 667
Query: 574 ELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSERLGEAWAG 633
ELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSERLGEAWAG
Sbjct: 668 ELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSERLGEAWAG 727
Query: 634 RGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPADALP 693
RGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPADALP
Sbjct: 728 RGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPADALP 787
Query: 694 LPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVRATR 753
LPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVRATR
Sbjct: 788 LPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVRATR 847
Query: 754 SQQHTPVLSSSQPLRKKPRMGF 775
SQQHTPVLSSSQPLRKKPRMGF
Sbjct: 848 SQQHTPVLSSSQPLRKKPRMGF 869
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo
sapiens]
Length = 1758
Score = 43.9 bits (102), Expect = 6e-04
Identities = 46/166 (27%), Positives = 61/166 (36%), Gaps = 26/166 (15%)
Query: 579 EEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAW 638
EE+G ++ VL GQ LL L +P P R+ A G G
Sbjct: 460 EEKGYQVPVLGTPSLLGQSLLHGQL--IPTTGPV-------------RINTARPGGGRPG 504
Query: 639 WERQQ--GRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPADALPLPP 696
WE G P +Q RR +R S + H + S+ T P P P +P PP
Sbjct: 505 WEHSNKLGYLVSPPQQIRRGERSCYRSINRGRH-HSERSQRTQGPSLPATPVFVPVPPPP 563
Query: 697 TTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPP 742
PP P GVP Q + + PP + P + PP
Sbjct: 564 LYPPPPHTLP--LPPGVPPPQ------FSPQFPPGQPPPAGYSVPP 601
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo
sapiens]
Length = 1792
Score = 43.9 bits (102), Expect = 6e-04
Identities = 46/166 (27%), Positives = 61/166 (36%), Gaps = 26/166 (15%)
Query: 579 EEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAW 638
EE+G ++ VL GQ LL L +P P R+ A G G
Sbjct: 460 EEKGYQVPVLGTPSLLGQSLLHGQL--IPTTGPV-------------RINTARPGGGRPG 504
Query: 639 WERQQ--GRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPADALPLPP 696
WE G P +Q RR +R S + H + S+ T P P P +P PP
Sbjct: 505 WEHSNKLGYLVSPPQQIRRGERSCYRSINRGRH-HSERSQRTQGPSLPATPVFVPVPPPP 563
Query: 697 TTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPP 742
PP P GVP Q + + PP + P + PP
Sbjct: 564 LYPPPPHTLP--LPPGVPPPQ------FSPQFPPGQPPPAGYSVPP 601
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 42.7 bits (99), Expect = 0.001
Identities = 52/175 (29%), Positives = 64/175 (36%), Gaps = 25/175 (14%)
Query: 607 PAAEPPPAPESGLEDKLSERLGE--------AWAGRGAAWWERQQGRTSEP---GRQTRR 655
PAA P+ GL+ S L A +G A R S+P G Q R
Sbjct: 213 PAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALR 272
Query: 656 PK-----RRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPA-DALPLPPTTPPSQELTP--- 706
P R+ + LS + S+P SP PP+ LP PP TPPSQ T
Sbjct: 273 PPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGS 332
Query: 707 ---DACAQGVPSEQRQMLRDYMAKLPPQRDTP--GCATTPPHSQASSVRATRSQQ 756
A +PS L + PP P +PP S S AT S Q
Sbjct: 333 PTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQ 387
Score = 32.3 bits (72), Expect = 1.7
Identities = 33/102 (32%), Positives = 40/102 (39%), Gaps = 10/102 (9%)
Query: 672 VDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLP-P 730
V PS S P SP P PP PP P A+ P + + LP P
Sbjct: 442 VPPSPPASPPMSPSATP------PPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSP 495
Query: 731 QRDTPGCAT-TPPHSQASSVRATRSQQHTPVLSSSQPLRKKP 771
PG A +P S S AT Q PVL++ PL + P
Sbjct: 496 PASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA--PLLQVP 535
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 41.6 bits (96), Expect = 0.003
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 673 DPSEDTSSPHSPEWPPADALPLPPT--TPPSQELTPDACAQGVPSEQRQMLRDYMAKLPP 730
DP+ SSPH+P PP A+ P+ TP S+ L P + +G P R+ A P
Sbjct: 107 DPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEGEPRPYALPPRESPAPRPF 166
Query: 731 QRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLR 768
+ P + PP Q S R P S +P+R
Sbjct: 167 RWGDP-FSPAPPRPQPPS-RPAAQPPSRPAFRSPRPVR 202
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 40.8 bits (94), Expect = 0.005
Identities = 95/368 (25%), Positives = 129/368 (35%), Gaps = 76/368 (20%)
Query: 438 PPQSLPSRIDSLPAF------PLLEPKIQWRLQERLKAP---TIGLAAVVPPLPSAPTPG 488
PPQ P R D+ PA PL P + P L A +PP P TP
Sbjct: 282 PPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATP- 340
Query: 489 LVLFQLSAAGDVFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKA 548
L L S + Q L P ++ A PP T P AP + T
Sbjct: 341 LPLAPPSPSAPPSLQTL-PSPPATPPSQA-PPSMTTPPMQAPPSLQTIPPIQVPHSLTSP 398
Query: 549 LLKVPLAPPVWTAPTFTHRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPA 608
L+ P +P ++ T LGS L+ M+ Q S PA
Sbjct: 399 SLQAPPSPLALSSLQAT--TSLGSPTLQATHS--------FLTMSPRQTQASLTSPSRPA 448
Query: 609 AEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSL 668
+ PP +P L+ LS + P QT + LSS ++
Sbjct: 449 STPPDSPP--LQAPLS--------------------LPASPPLQTSLSPAVSPLSSPLTI 486
Query: 669 SGHVDPSEDTSSPHSPEWPPADALPLPP------------TTPPSQELTPDACAQGVPSE 716
H + + + HSP+ P +L +PP TPP+ TP + +PS
Sbjct: 487 --HPLQALSSLASHSPQ-APLSSLIMPPLETQSSLAPPSLQTPPASLTTPP--LENLPSL 541
Query: 717 QRQMLRDYMAKL-PPQRDTPGC------------ATTPPHSQASSVRATRSQQHTPVLSS 763
L+ A L P +TP C TTPP SS+ AT Q P L +
Sbjct: 542 APPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSI-ATPPPQAPPAL-A 599
Query: 764 SQPLRKKP 771
S PL+ P
Sbjct: 600 SPPLQGLP 607
Score = 38.1 bits (87), Expect = 0.031
Identities = 54/182 (29%), Positives = 65/182 (35%), Gaps = 33/182 (18%)
Query: 607 PAAEPPPAPESGLEDKLSERLGE--------AWAGRGAAWWERQQGRTSEP---GRQTRR 655
PAA P+ GL+ S L A +G A R S+P G Q R
Sbjct: 222 PAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALR 281
Query: 656 PK-----RRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPAD--ALPLPPTTPPSQEL-TPD 707
P R+ + LS + S + PP D A PLP T PPS L TP
Sbjct: 282 PPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPL 341
Query: 708 ACAQGVPSEQRQMLRDYMAKLPPQRDT-PGCATTPPHSQASSVRATRSQQHTPVLSSSQP 766
A PS PP T P TPP SQA T Q P L + P
Sbjct: 342 PLAPPSPS------------APPSLQTLPSPPATPP-SQAPPSMTTPPMQAPPSLQTIPP 388
Query: 767 LR 768
++
Sbjct: 389 IQ 390
Score = 34.7 bits (78), Expect = 0.35
Identities = 91/401 (22%), Positives = 121/401 (30%), Gaps = 65/401 (16%)
Query: 402 PPPRPSCVQPLLLGGQGG-QLQLLHLAEGASVPRLAGPPQSLPSRIDSLPAFPL---LEP 457
PP P PL L Q L S P P Q+L S P PL + P
Sbjct: 451 PPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMP 510
Query: 458 KIQWRLQERLKAPTIGL---AAVVPPLPSAPTPGLVLFQLSAAGDVFYQQLRPQVDSSLR 514
++ Q L P++ + PPL + P+ Q ++A P +
Sbjct: 511 PLE--TQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCP 568
Query: 515 RDAGPPGDTQPDCHAPTASWTSQDTAG---CSQWLKALLKVPLAPPVWTAPTFTHRQMLG 571
A P T P P++ T A S L+ L PL+P P L
Sbjct: 569 LQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALP 628
Query: 572 STELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSERLGEAW 631
+ L L + L L P + PP P
Sbjct: 629 PLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV--------------- 673
Query: 632 AGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSG---HVDPSEDTSSPHSPEWPP 688
Q S P P + SL+ V PS S P SP P
Sbjct: 674 -----------QAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP 722
Query: 689 ---------ADALPLPPTTPPSQELTPDAC-------------AQGVPSEQRQMLRDYMA 726
A L +PP+ P S ++P A Q PS + +A
Sbjct: 723 PPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLA 782
Query: 727 KLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPL 767
K PPQ P TPP S A+ Q S+S P+
Sbjct: 783 KPPPQ--APPALATPPLQALPSPPASFPGQAPFSPSASLPM 821
Score = 33.1 bits (74), Expect = 1.0
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Query: 680 SPHSPEWPPA-DALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCA 738
+P SP PP+ LP PP TPPSQ P + + ++P +P
Sbjct: 344 APPSPSAPPSLQTLPSPPATPPSQ--APPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQ 401
Query: 739 TTPPHSQASSVRATRSQQHTPVLSSSQPLRKKPR 772
P SS++AT S + ++ L PR
Sbjct: 402 APPSPLALSSLQATTSLGSPTLQATHSFLTMSPR 435
Score = 31.2 bits (69), Expect = 3.8
Identities = 35/108 (32%), Positives = 43/108 (39%), Gaps = 16/108 (14%)
Query: 674 PSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACA----QGVPSEQRQMLRDYMAKLP 729
PS +P SP PA P TPPSQ P + A Q PS A P
Sbjct: 669 PSPPVQAPFSP---PASPPVSPSATPPSQ--APPSLAAPPLQVPPSPPASPPMSPSATPP 723
Query: 730 PQRDTPGCA------TTPPHSQASSVRATRSQQHTPVLSSSQPLRKKP 771
PQ P A +PP S S AT + P+L ++ PL+ P
Sbjct: 724 PQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLL-AAPPLQVPP 770
Score = 30.0 bits (66), Expect = 8.5
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 12/123 (9%)
Query: 656 PKRRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPADALP---LPPTTPPSQELTPDACAQG 712
P + +S L G P + P+ PP ALP PP+ P S L+P A
Sbjct: 591 PPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLA---- 646
Query: 713 VPSEQR-QMLRDYMAKL---PPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLR 768
PS Q L ++ + PP +PP S S AT Q P L ++ PL+
Sbjct: 647 TPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSL-AAPPLQ 705
Query: 769 KKP 771
P
Sbjct: 706 VPP 708
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 40.8 bits (94), Expect = 0.005
Identities = 85/390 (21%), Positives = 137/390 (35%), Gaps = 55/390 (14%)
Query: 392 PSPLLLARLLPPPRPSCVQPLLLG------GQGGQLQLLHL-AEGA--SVPRLAGPPQSL 442
PS A +LPPP LLG Q +++ L AEGA P PP
Sbjct: 359 PSEEPPAEILPPPAEKSPSVELLGEIRSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTVE 418
Query: 443 PSRIDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFY 502
+ D P P P+ + R L+ T A+ P APT FQ +
Sbjct: 419 ETLADVQPLLPEEAPREEAR---ELQLST----AMETPAEEAPTE----FQSPLPKETTA 467
Query: 503 QQLRPQVDSSLRRDAGPPGDTQP-DCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTA 561
++ ++ L PP D P + +P + TS + A A ++ PLA
Sbjct: 468 EEASAEIQ--LLAATEPPADETPAEARSPLSEETSAEEA------HAEVQSPLAEETTAE 519
Query: 562 PTFTHRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLED 621
Q+L + E +E + L + + + + P+A+ E+ LE
Sbjct: 520 EASAEIQLLAAIEAPADETPAEAQSPLSEETSAEEAPAEVQS---PSAKGVSIEEAPLE- 575
Query: 622 KLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSP 681
L GE T+E + T+ S+ V P +P
Sbjct: 576 -LQPPSGEE--------------TTAEEASAAIQLLAATEASAE-EAPAEVQPPPAEEAP 619
Query: 682 HSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTP 741
+ PPA+ P PP++E + Q P+E+ + PP + P P
Sbjct: 620 AEVQPPPAEEAPAEVQPPPAEEAPAE--VQPPPAEEAPA----EVQPPPAEEAPAEVQPP 673
Query: 742 PHSQASSVRATRSQQHTPVLSSSQPLRKKP 771
P +A + + + TP+ + + P
Sbjct: 674 PAEEAPAEVQSLPAEETPIEETLAAVHSPP 703
>gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo
sapiens]
Length = 1198
Score = 40.4 bits (93), Expect = 0.006
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 31/197 (15%)
Query: 568 QMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAP--ESGLEDKLSE 625
+ L + E +E++ + L + +A+ Q L AA PP + E+ ++K
Sbjct: 641 ECLFTLEAHSQEQKKRVCWCLSENIAKQQQL---------AASPPDSKMFETEADEKREM 691
Query: 626 RLGEAWAGRGAAWWERQQGRTSEPGRQTR----------RPKRRTQLSSSFSLSGHVDPS 675
L E G+G + + PG++ P + S LS D +
Sbjct: 692 ALEE---GKGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPAPSQEPLSSK-DSA 747
Query: 676 EDTSSPHSPEWPPADALPLPPTTPPSQELTP----DACAQGVPSEQRQMLRDYMA-KLPP 730
SP P+ PP+ +P PP+Q+L+P A + +P + + +D A + P
Sbjct: 748 TSEGSPPGPDAPPSKDVPPCQEPPPAQDLSPCQDLPAGQEPLPHQDPLLTKDLPAIQESP 807
Query: 731 QRDTPGCATTPPHSQAS 747
RD P C PP SQ S
Sbjct: 808 TRDLPPCQDLPP-SQVS 823
>gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo
sapiens]
Length = 917
Score = 40.4 bits (93), Expect = 0.006
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 31/197 (15%)
Query: 568 QMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAP--ESGLEDKLSE 625
+ L + E +E++ + L + +A+ Q L AA PP + E+ ++K
Sbjct: 360 ECLFTLEAHSQEQKKRVCWCLSENIAKQQQL---------AASPPDSKMFETEADEKREM 410
Query: 626 RLGEAWAGRGAAWWERQQGRTSEPGRQTR----------RPKRRTQLSSSFSLSGHVDPS 675
L E G+G + + PG++ P + S LS D +
Sbjct: 411 ALEE---GKGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPAPSQEPLSSK-DSA 466
Query: 676 EDTSSPHSPEWPPADALPLPPTTPPSQELTP----DACAQGVPSEQRQMLRDYMA-KLPP 730
SP P+ PP+ +P PP+Q+L+P A + +P + + +D A + P
Sbjct: 467 TSEGSPPGPDAPPSKDVPPCQEPPPAQDLSPCQDLPAGQEPLPHQDPLLTKDLPAIQESP 526
Query: 731 QRDTPGCATTPPHSQAS 747
RD P C PP SQ S
Sbjct: 527 TRDLPPCQDLPP-SQVS 542
>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
Length = 356
Score = 40.0 bits (92), Expect = 0.008
Identities = 52/188 (27%), Positives = 71/188 (37%), Gaps = 32/188 (17%)
Query: 534 WTSQDTAGCSQWLKALLKVPLAPPVWTAPTFTHR--QMLGSTELRREEEEGQRLGVLRKA 591
W +Q G + AL P V+T + H + S E EG R G
Sbjct: 123 WGTQAPCGRLRAKPALQTQRKEPLVFTQRSLLHSSPRWFSSRHSSISEGEGDRCG----- 177
Query: 592 MARGQLLLQRDLGSLPAAEP-PPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPG 650
+ GS P A P PP P+ G ++R EA ++W T+ PG
Sbjct: 178 ------FAEPPGGSSPPAPPLPPPPKPGSP---TQRAREA-----SSWKPPGHSHTAPPG 223
Query: 651 RQTRRP-KRRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDAC 709
R T+RP +R SS LS P +S S P LP PP P+
Sbjct: 224 RGTQRPLTQRHSSESSSELSSSAWPGTIWTSTLS----PGQRLPTPPPPDPAA-----LT 274
Query: 710 AQGVPSEQ 717
+ G+P +Q
Sbjct: 275 SWGLPQQQ 282
>gi|10864075 regulator of G-protein signalling 3 isoform 2 [Homo
sapiens]
Length = 519
Score = 39.3 bits (90), Expect = 0.014
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 673 DPSEDTSSPHSPEWPPADALPLPPTTPPSQELTP----DACAQGVPSEQRQMLRDYMA-K 727
D + SP P+ PP+ +P PP+Q+L+P A + +P + + +D A +
Sbjct: 66 DSATSEGSPPGPDAPPSKDVPPCQEPPPAQDLSPCQDLPAGQEPLPHQDPLLTKDLPAIQ 125
Query: 728 LPPQRDTPGCATTPPHSQAS 747
P RD P C PP SQ S
Sbjct: 126 ESPTRDLPPCQDLPP-SQVS 144
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 38.9 bits (89), Expect = 0.018
Identities = 31/91 (34%), Positives = 33/91 (36%), Gaps = 6/91 (6%)
Query: 674 PSEDTSSPHSP-----EWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKL 728
P++ SPH PP ALP PT PP L P P Q R L
Sbjct: 921 PTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQPVLPPQPTLPPQPVLPPQPTRPPQPVL 980
Query: 729 PPQRDTPGCATTPPHSQASSVRATRSQQHTP 759
PPQ P PP A VR Q H P
Sbjct: 981 PPQPMLPPQPVLPP-QPALPVRPEPLQPHLP 1010
Score = 33.1 bits (74), Expect = 1.0
Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 392 PSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAEGASVPRLAGPPQSLPSRIDSLPA 451
P P++ + +PP P + P G QL+ L + + P PPQ P +P
Sbjct: 746 PQPVVPLQPVPPHLPPYLAPASQVGAPAQLKPLQMPQAPLQPLAQVPPQMPP-----IPV 800
Query: 452 FPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTP 487
P + P A GL +P LP+A P
Sbjct: 801 VPPITP----------LAGIDGLPPALPDLPTATVP 826
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 38.5 bits (88), Expect = 0.024
Identities = 36/136 (26%), Positives = 47/136 (34%), Gaps = 10/136 (7%)
Query: 646 TSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHS--PEWPPADALPLPPTTPPSQE 703
T+ P T P T S + + P T SP + P PPA LPPTT PS
Sbjct: 1467 TTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPP 1526
Query: 704 LT-----PDACAQGVPSEQRQMLRDYMAKLPP---QRDTPGCATTPPHSQASSVRATRSQ 755
T P P+ LPP P TTPP + S T +
Sbjct: 1527 TTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTP 1586
Query: 756 QHTPVLSSSQPLRKKP 771
+ +++ P P
Sbjct: 1587 SPPTITTTTPPPTTTP 1602
Score = 33.1 bits (74), Expect = 1.0
Identities = 32/119 (26%), Positives = 39/119 (32%), Gaps = 6/119 (5%)
Query: 647 SEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHS-PEWPPADALPLPPTTPPSQELT 705
S P T P T S + + P+ S P + P PP LPPTT PS T
Sbjct: 1587 SPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPT 1646
Query: 706 -----PDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTP 759
P P+ PP TP T S ++ T S TP
Sbjct: 1647 TTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTP 1705
Score = 30.4 bits (67), Expect = 6.5
Identities = 28/97 (28%), Positives = 34/97 (35%), Gaps = 26/97 (26%)
Query: 674 PSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRD 733
PS T++P SP PP LPPTT PS T PP
Sbjct: 1399 PSPPTTTP-SP--PPTSTTTLPPTTTPSPPTT-------------------TTTTPPPTT 1436
Query: 734 TPG----CATTPPHSQASSVRATRSQQHTPVLSSSQP 766
TP TTPP + S + + P + S P
Sbjct: 1437 TPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSPP 1473
Score = 30.4 bits (67), Expect = 6.5
Identities = 29/103 (28%), Positives = 35/103 (33%), Gaps = 13/103 (12%)
Query: 647 SEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEW-PPADALPLPPTTPPSQELT 705
S P T P T S + + P+ S P S PP P PPTT PS
Sbjct: 1423 SPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTTTPS---- 1478
Query: 706 PDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASS 748
P P+ PP TP TT P + +S
Sbjct: 1479 PPTTTPSPPTT--------TTTTPPPTTTPSPPTTTPITPPAS 1513
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 38.5 bits (88), Expect = 0.024
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 658 RRTQLSSSFSLSGHVDPS----EDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGV 713
R Q S S ++S DP +DTS+P P PA A+P PP P P A + G
Sbjct: 1392 RDLQESISSAISALDDPPLAGPKDTSTPDGPPLAPAAAVPGPPPLPG----LPSANSNGT 1447
Query: 714 PSEQRQMLRDYMAKLPPQRDTPGCATTPP 742
P + +L + PP TP PP
Sbjct: 1448 P--EPPLLEEKPPPTPPPAPTPQPQPPPP 1474
Score = 30.4 bits (67), Expect = 6.5
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 676 EDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTP 735
E T+S PE P A+P PP L P ++++ + L +R T
Sbjct: 1707 EKTTSEKPPEQTPETAMPEPPAPEKPSLLRPVE-----KEKEKEKVTRGERPLRGERATS 1761
Query: 736 GCATTPPHSQASSVRAT-RSQQHTPVLSSSQPLRKK 770
G T P S A+ AT R + P ++P KK
Sbjct: 1762 GRQTRPERSLATGQPATSRLPKARPTKVKAEPPPKK 1797
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 38.1 bits (87), Expect = 0.031
Identities = 35/117 (29%), Positives = 47/117 (40%), Gaps = 16/117 (13%)
Query: 662 LSSSFSLS------GHVDPSEDTSSPHSPEWP-PADALPLPPTTPPSQELTPDACAQGVP 714
L+S+FSL+ + PS S P P P +LPLPP P + +P V
Sbjct: 926 LASAFSLAVMTVAQSLLSPSPGLLSQSPPAPPSPLPSLPLPPPVAPGGQESPSPHTAEVE 985
Query: 715 SEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLRKKP 771
SE A PP R PG A P S+ + Q T ++PL +P
Sbjct: 986 SE---------ASPPPARPLPGEARLAPISEEGKPQLVGRFQVTSSKEPAEPLPLQP 1033
Score = 31.6 bits (70), Expect = 2.9
Identities = 37/144 (25%), Positives = 51/144 (35%), Gaps = 19/144 (13%)
Query: 345 VLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLKWNHGLPSPLLLARLLPPP 404
V L+Q S P PPT C+Q +L P P PS
Sbjct: 874 VPLSQCPWSSLPTTSPPTFSPTCSQVTL-----SSPFFPPCPSTSSFPS----------- 917
Query: 405 RPSCVQPLLLGGQGGQLQLLHLAEGASVPRLAGPPQSLPSRIDSLPAFPLLEPKIQWRLQ 464
+ PLL L ++ +A+ P QS P+ LP+ P L P + Q
Sbjct: 918 --TTAAPLLSLASAFSLAVMTVAQSLLSPSPGLLSQSPPAPPSPLPSLP-LPPPVAPGGQ 974
Query: 465 ERLKAPTIGLAAVVPPLPSAPTPG 488
E T + + P P+ P PG
Sbjct: 975 ESPSPHTAEVESEASPPPARPLPG 998
>gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sapiens]
Length = 2603
Score = 38.1 bits (87), Expect = 0.031
Identities = 42/169 (24%), Positives = 59/169 (34%), Gaps = 36/169 (21%)
Query: 605 SLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSS 664
S P++ PPA G+ G A + A+ E++ G S P +T + SS
Sbjct: 2041 SSPSSPSPPAQPGGVSRNSPLDCGSASPNKVASSSEQEAG--SPPVVETTNTRPPNSSSS 2098
Query: 665 SFSLSGHVDPSEDTSSPHSPEWPPADALPLPP-----TTPP------------------S 701
S S S H + + S PP +PP T PP
Sbjct: 2099 SGSSSAHSNQQQPPGSVSQEPRPPLQQSQVPPPEVRMTVPPLATSSAPVAVPSTAPVTYP 2158
Query: 702 QELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVR 750
TP C Q P + +R PP TT PH ++SV+
Sbjct: 2159 MPQTPMGCPQPTPKMETPAIRP-----PPH------GTTAPHKNSASVQ 2196
>gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sapiens]
Length = 2352
Score = 38.1 bits (87), Expect = 0.031
Identities = 42/169 (24%), Positives = 59/169 (34%), Gaps = 36/169 (21%)
Query: 605 SLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSS 664
S P++ PPA G+ G A + A+ E++ G S P +T + SS
Sbjct: 1790 SSPSSPSPPAQPGGVSRNSPLDCGSASPNKVASSSEQEAG--SPPVVETTNTRPPNSSSS 1847
Query: 665 SFSLSGHVDPSEDTSSPHSPEWPPADALPLPP-----TTPP------------------S 701
S S S H + + S PP +PP T PP
Sbjct: 1848 SGSSSAHSNQQQPPGSVSQEPRPPLQQSQVPPPEVRMTVPPLATSSAPVAVPSTAPVTYP 1907
Query: 702 QELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVR 750
TP C Q P + +R PP TT PH ++SV+
Sbjct: 1908 MPQTPMGCPQPTPKMETPAIRP-----PPH------GTTAPHKNSASVQ 1945
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 37.7 bits (86), Expect = 0.041
Identities = 51/192 (26%), Positives = 74/192 (38%), Gaps = 13/192 (6%)
Query: 391 LPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAEGASVPRLAGP---PQSLPSRID 447
LP+P L P P P+ V+PLL ++ A GA+ ++ P P SLP
Sbjct: 1353 LPTPTLGTARAPMPTPTLVRPLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGPAS 1412
Query: 448 S-LP---AFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAP--TPGLVLFQLSAAGDVF 501
S +P + PL P + I + +P SAP P +SA+G
Sbjct: 1413 SPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPAL 1472
Query: 502 YQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTA 561
+ P + + GPP P +P+AS T G + P+ A
Sbjct: 1473 LTSVTPPLAPVVPAAPGPP-SLAPSGASPSASAL---TLGLATAPSLSSSQTPGHPLLLA 1528
Query: 562 PTFTHRQMLGST 573
PT +H L ST
Sbjct: 1529 PTSSHVPGLNST 1540
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 37.4 bits (85), Expect = 0.053
Identities = 36/116 (31%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Query: 656 PKRRTQLSSSFSLSGHVDPSEDTSSPHSPEWPP-ADALPLPPTTPPSQELTPDACAQGVP 714
P R + + +++G + P + SSP P PP D P TT ++E A A +P
Sbjct: 2 PGERPRGAPPPTMTGDLQPRQVASSPGHPSQPPLEDNTPATRTTKGAREAGGQAQAMELP 61
Query: 715 SEQRQMLRDYMAKLPPQR-----DTP---GCATTPPHS---QASSVRATRSQQHTP 759
Q + RD K P R TP G TPP QA S A R++ P
Sbjct: 62 EAQPRQARDGELKPPSLRGQAPSSTPGKRGSPQTPPGRSPLQAPSRLAGRAEGSPP 117
Score = 34.3 bits (77), Expect = 0.45
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 614 APESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVD 673
A E+G + +R+ GAA E+ G+ R P R T+ SG +
Sbjct: 2688 AGETGAQKPPGDRMLCPGRMDGAALGEQPTGQKGASARGFWGP-RETKALGVCKESGS-E 2745
Query: 674 PSEDTSSPHSPE----W----PPADALPLPPTTPPSQELTPDACAQGVP 714
P+ED+S HS W PP L P T+ + T +C QG+P
Sbjct: 2746 PAEDSSRAHSRSEEGVWEENTPPLGPLGFPETSSSPADSTTSSCLQGLP 2794
Score = 31.6 bits (70), Expect = 2.9
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 25/159 (15%)
Query: 594 RGQLLLQRDLGSLPAAEPPPAPESGLEDKLSE----------RLGEAWAGRGAAWWERQQ 643
RGQ +R LG LP + + L + ++E G+A G W + +
Sbjct: 3176 RGQA--RRSLGDLPGGLEGSSAVAHLLNSITEPAPKHHRGKRSAGKAAGSPGDPWGQEGE 3233
Query: 644 GRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQE 703
+ PG + +P+ R+ S+ G P +++ + P PP T PS
Sbjct: 3234 AKKDSPGERA-KPRARSTPSNP---DGAATPDSASATALADAGSPG-----PPRTTPSP- 3283
Query: 704 LTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPP 742
+PD A G P Q + + A P RD C P
Sbjct: 3284 -SPDPWAGGEPLLQATPVHE--ACKDPSRDCHHCGKRFP 3319
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 37.4 bits (85), Expect = 0.053
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 26/180 (14%)
Query: 576 RREEEEGQRLGVLRKAMARGQLL------------LQRDLGSLPAAEPPPAPESGLEDKL 623
RR EEE +R+ R+A +L L+ + + PAA PAP + +L
Sbjct: 469 RRREEEERRMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKEL 528
Query: 624 SERLGEAWAGRGAAWWERQQGRTSEPGRQTRRP---KRRTQLSSSFSLSGHVDPSEDTSS 680
A E ++ + P + T P T +S S S S + +S
Sbjct: 529 PAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFE-AS 587
Query: 681 PHSPEWP------PADALPLPPTTPPSQELTPDACAQG---VPSEQRQMLRDYMAKLPPQ 731
P P+ P P + +P PPTTPP ++ P G P Q Y LPP+
Sbjct: 588 PVEPQLPSKEGPEPPEEVP-PPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPR 646
Score = 30.8 bits (68), Expect = 5.0
Identities = 44/187 (23%), Positives = 63/187 (33%), Gaps = 39/187 (20%)
Query: 607 PAAEPPPAPESGLE--DKLSERLGEAWAG--RGAAWWERQQGRTSEPGRQTRRPKRRTQL 662
P P E L+ D+L + + WAG + E+ + E GR +
Sbjct: 300 PVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAEGHR 359
Query: 663 SSSFSLSGHVDPSEDT----SSPHS---------------PEWPPADALPLPPTTPPSQE 703
S S SG P E +SP+S PE P P PP PP +
Sbjct: 360 DSQ-SASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPHR- 417
Query: 704 LTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSS 763
A G P DY P R P C P + + R R Q + + +
Sbjct: 418 --GPAGNWGPPG-------DY-----PDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLA 463
Query: 764 SQPLRKK 770
+ R++
Sbjct: 464 VERARRR 470
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 37.4 bits (85), Expect = 0.053
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 19/136 (13%)
Query: 646 TSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELT 705
T G+ +P +QLS+ S + P + + H P PP A PL T P SQ
Sbjct: 679 TQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPN--HPPPQPPTQATPLMHTKPNSQG-P 735
Query: 706 PDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVRATR---------SQQ 756
P+ A +PSE + + PPQ TP +T P Q S+ A + +Q
Sbjct: 736 PNPMA--LPSEHG---LEQPSHTPPQTPTPP-STPPLGKQNPSLPAPQTLAGGNPETAQP 789
Query: 757 HTPVLSSSQPLRKKPR 772
H L +P+ KPR
Sbjct: 790 HAGTLPRPRPV-PKPR 804
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 37.4 bits (85), Expect = 0.053
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 19/136 (13%)
Query: 646 TSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELT 705
T G+ +P +QLS+ S + P + + H P PP A PL T P SQ
Sbjct: 601 TQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPN--HPPPQPPTQATPLMHTKPNSQG-P 657
Query: 706 PDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVRATR---------SQQ 756
P+ A +PSE + + PPQ TP +T P Q S+ A + +Q
Sbjct: 658 PNPMA--LPSEHG---LEQPSHTPPQTPTPP-STPPLGKQNPSLPAPQTLAGGNPETAQP 711
Query: 757 HTPVLSSSQPLRKKPR 772
H L +P+ KPR
Sbjct: 712 HAGTLPRPRPV-PKPR 726
>gi|89941470 ankyrin repeat domain 34 [Homo sapiens]
Length = 496
Score = 37.4 bits (85), Expect = 0.053
Identities = 94/356 (26%), Positives = 122/356 (34%), Gaps = 74/356 (20%)
Query: 392 PSPLLLARLLPPPRPS-CVQP----LLLGGQGGQLQLLHLAEGASVPR------LAGPPQ 440
PSP + P P C P L G GG+ L A+ R L PP
Sbjct: 164 PSPGVEDPAPASPSPGFCTSPSEIQLQTAGGGGRGMLSPRAQEEEEKRDVFEFPLPKPPD 223
Query: 441 SLPSRIDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLV-LFQLSAAGD 499
PS + LP P PK +RL + GL A PP P PT G + +L+A +
Sbjct: 224 D-PSPSEPLPKPPRHPPKPL----KRLNSEPWGLVA--PPQPVPPTEGRPGIERLTAEFN 276
Query: 500 VFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVW 559
RP++ S R P D P W + T+G L + AP
Sbjct: 277 GLTLTGRPRL--SRRHSTEGPEDPPP--------WAEKVTSG-----GPLSRRNTAPEAQ 321
Query: 560 -TAPTFTHRQMLGSTE---------LRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAA 609
+ P RQ L E L + E RL + R+ + L +LP A
Sbjct: 322 ESGPPSGLRQKLSRMEPVELDTPGHLCPDSPESSRLSLERRRYSASPL-------TLPPA 374
Query: 610 EPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLS 669
P+P E GA GR PG RR S L
Sbjct: 375 GSAPSPRQSQESL-----------PGAV--SPLSGRRRSPGLLERR-------GSGTLLL 414
Query: 670 GHVDPSEDTSSPH---SPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLR 722
H+ + P SP P D P P PS P A A G P +R+++R
Sbjct: 415 DHISQTRPGFLPPLNVSPHPPIPDIRPQPGGRAPSLPAPPYAGAPGSPRTKRKLVR 470
>gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens]
Length = 600
Score = 37.0 bits (84), Expect = 0.070
Identities = 43/162 (26%), Positives = 62/162 (38%), Gaps = 31/162 (19%)
Query: 620 EDKLSERLGEA---WAGRGAAWWERQQGRTSEP---------GRQTRRPKR-RTQLSSSF 666
E + E LGE W G+ AA + + +SEP GRQ+R + Q +
Sbjct: 10 EKENQEELGETRRPWEGKTAASPQYSEPESSEPLEAKQGPETGRQSRSSRPWSPQSRAKT 69
Query: 667 SLSGHVDPSEDTSSPHSPEWPPADALPLPP-----TTPPSQELTPDACAQ-GVPSEQRQM 720
L G P + +P SP P + PL P PP + T + G P
Sbjct: 70 PLGGPAGPETSSPAPVSPREPSSSPSPLAPARQDLAAPPQSDRTTSVIPEAGTPYPD--- 126
Query: 721 LRDYMAKLPPQRDTPGCATTPPH-SQASSVRATRSQQHTPVL 761
P ++ + +TP H SQ+ +SQQ P L
Sbjct: 127 --------PLEQSSDKRESTPHHTSQSEGNTFQQSQQPKPHL 160
>gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens]
Length = 716
Score = 37.0 bits (84), Expect = 0.070
Identities = 43/162 (26%), Positives = 62/162 (38%), Gaps = 31/162 (19%)
Query: 620 EDKLSERLGEA---WAGRGAAWWERQQGRTSEP---------GRQTRRPKR-RTQLSSSF 666
E + E LGE W G+ AA + + +SEP GRQ+R + Q +
Sbjct: 10 EKENQEELGETRRPWEGKTAASPQYSEPESSEPLEAKQGPETGRQSRSSRPWSPQSRAKT 69
Query: 667 SLSGHVDPSEDTSSPHSPEWPPADALPLPP-----TTPPSQELTPDACAQ-GVPSEQRQM 720
L G P + +P SP P + PL P PP + T + G P
Sbjct: 70 PLGGPAGPETSSPAPVSPREPSSSPSPLAPARQDLAAPPQSDRTTSVIPEAGTPYPD--- 126
Query: 721 LRDYMAKLPPQRDTPGCATTPPH-SQASSVRATRSQQHTPVL 761
P ++ + +TP H SQ+ +SQQ P L
Sbjct: 127 --------PLEQSSDKRESTPHHTSQSEGNTFQQSQQPKPHL 160
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 37.0 bits (84), Expect = 0.070
Identities = 51/190 (26%), Positives = 64/190 (33%), Gaps = 26/190 (13%)
Query: 602 DLGSLPAAEPPPAPESGLEDKLS-ERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPK--- 657
D+GS P + PPP P + + S G G + G T P R
Sbjct: 175 DVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPR--QPSPGPTPPPFPGNRGTALGG 232
Query: 658 ---RRTQLSSSFSLSGHVD----PSEDTSSPHSPEWPPADALP------LPPTTPPSQEL 704
R++ LSSS S PS P PP P +PP PP Q
Sbjct: 233 GSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPP--PPPQNN 290
Query: 705 TPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSS 764
P VPS R PP PG PP S + Q++ + SS+
Sbjct: 291 KPP-----VPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSST 345
Query: 765 QPLRKKPRMG 774
PL R G
Sbjct: 346 PPLPSPGRSG 355
Score = 33.1 bits (74), Expect = 1.0
Identities = 29/102 (28%), Positives = 36/102 (35%), Gaps = 11/102 (10%)
Query: 654 RRPKRRTQLSSSF------SLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPD 707
R P+R LSSS SG + P P PP + PLPP P S+ +
Sbjct: 333 RLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTS 392
Query: 708 ACAQGVPSEQRQMLRDY-----MAKLPPQRDTPGCATTPPHS 744
P + D LPP R + G PP S
Sbjct: 393 RALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPS 434
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 37.0 bits (84), Expect = 0.070
Identities = 51/190 (26%), Positives = 64/190 (33%), Gaps = 26/190 (13%)
Query: 602 DLGSLPAAEPPPAPESGLEDKLS-ERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPK--- 657
D+GS P + PPP P + + S G G + G T P R
Sbjct: 175 DVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPR--QPSPGPTPPPFPGNRGTALGG 232
Query: 658 ---RRTQLSSSFSLSGHVD----PSEDTSSPHSPEWPPADALP------LPPTTPPSQEL 704
R++ LSSS S PS P PP P +PP PP Q
Sbjct: 233 GSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPP--PPPQNN 290
Query: 705 TPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSS 764
P VPS R PP PG PP S + Q++ + SS+
Sbjct: 291 KPP-----VPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSST 345
Query: 765 QPLRKKPRMG 774
PL R G
Sbjct: 346 PPLPSPGRSG 355
Score = 33.1 bits (74), Expect = 1.0
Identities = 29/102 (28%), Positives = 36/102 (35%), Gaps = 11/102 (10%)
Query: 654 RRPKRRTQLSSSF------SLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPD 707
R P+R LSSS SG + P P PP + PLPP P S+ +
Sbjct: 333 RLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTS 392
Query: 708 ACAQGVPSEQRQMLRDY-----MAKLPPQRDTPGCATTPPHS 744
P + D LPP R + G PP S
Sbjct: 393 RALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPS 434
>gi|24308394 hypothetical protein LOC140893 [Homo sapiens]
Length = 664
Score = 37.0 bits (84), Expect = 0.070
Identities = 81/348 (23%), Positives = 121/348 (34%), Gaps = 61/348 (17%)
Query: 426 LAEGASVPRLAGPPQSLPSRIDSL--PAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPS 483
++ GA++P P S P RI + ++ P Q +R P G PPLP+
Sbjct: 195 ISPGATLPESRAPDMS-PQRISNQLHGTIAVVRPGSQACPADR--GPANGTP---PPLPA 248
Query: 484 APTPGLVLFQLSAAGDVFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCS 543
+P ++ + D F + RP + P D + P S
Sbjct: 249 RSSPPSPAYERGLSLDSFLRASRPSAMTHEAPKLSPKVDRLCLLNRPL-----------S 297
Query: 544 QWLKALLKVPLAPPVWTAPTFTHRQMLGSTELRREEEEGQRLGV---------------L 588
L++ PLAP AP+ Q L + E EE + LG+ L
Sbjct: 298 LHLQSPHSSPLAPAA--APSDPRLQDLKAREAEAWEEPTELLGLPSALAGMQDLRLEGAL 355
Query: 589 RKAMARGQLLLQRDLGSL-PAAEPPPAPE-------SGLEDKLSERLGEAWAGRGAAWWE 640
+A+ QL + GS+ P +P P S E +E A A G +
Sbjct: 356 HLLLAQQQLRARARAGSVRPRGQPTPGEMLPSLPVGSDSEGPENEGTRAALAAAGLSG-- 413
Query: 641 RQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSE-------DTSSP---HSPEWPPA- 689
GR ++P R + + +L +D SE DT P H P A
Sbjct: 414 ---GRHTQPAGPGRAQRTEAAATQDCALDKPLDLSEWGRARGQDTPKPAGQHGSLSPAAA 470
Query: 690 -DALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPG 736
A P PPT +P A + G + + + P R PG
Sbjct: 471 HTASPEPPTQSGPLTRSPQALSNGTKGTRVPEQEEASTPMDPSRPLPG 518
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 36.6 bits (83), Expect = 0.091
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Query: 646 TSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELT 705
TS T +P RT S + ++S +P +++ P +PE PP+ + P T P+ T
Sbjct: 1336 TSTDQPVTPKPTSRTTRSRT-NMSSVKNP--ESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
Query: 706 PDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTP 759
+ + + L KL P T T P SQA+ R RS TP
Sbjct: 1393 RGRKNRS-SGKTPETLVPTAPKLEPSTSTDQPVTPEPTSQATRGRTNRSSVKTP 1445
Score = 33.5 bits (75), Expect = 0.77
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 434 RLAGPPQSLPSRIDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAP----TP-- 487
R AG P SL + ID P LEPK Q +R A + P P++P TP
Sbjct: 1725 RAAGNPGSLAAPIDHKPCSAPLEPKSQASRNQRWGAVRAAESLTAIPEPASPQLLETPIH 1784
Query: 488 GLVLFQLSAAG-DVFYQQLRPQVDSSLRRDA----GPPGDTQP 525
+ ++ AG F +L+P+ S +R PP QP
Sbjct: 1785 ASQIQKVEPAGRSRFTPELQPKASQSRKRSLATMDSPPHQKQP 1827
Score = 32.7 bits (73), Expect = 1.3
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Query: 656 PKRRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPS 715
PK +Q + S + V E P +PE P+ + P T+ P+ ++T ++
Sbjct: 1139 PKPTSQATRSRTNRSSVKTPEPVV-PTAPELQPSTSTDQPVTSEPTSQVTRGRKSRSSVK 1197
Query: 716 EQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTP 759
++ + +L P T T+ P SQA+ R RS TP
Sbjct: 1198 TPETVVPTAL-ELQPSTSTDRPVTSEPTSQATRGRKNRSSVKTP 1240
Score = 32.3 bits (72), Expect = 1.7
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 679 SSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSE--QRQMLRDYMAKLPPQRDTPG 736
SS +P+ A L P TP Q +TP+A AQG S+ + +R P+ +P
Sbjct: 1645 SSVKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQSKTLRSSTVRAMPVPTTPEFQSPV 1704
Query: 737 CATTP----PHSQASSVRATRSQQHTPVLSSSQPLRKKP 771
P P +Q S ++ R+ + L++ P+ KP
Sbjct: 1705 TTDQPISPEPITQPSCIKRQRAAGNPGSLAA--PIDHKP 1741
Score = 31.2 bits (69), Expect = 3.8
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 7/91 (7%)
Query: 676 EDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQR-------QMLRDYMAKL 728
++ SS +PE A L P+T Q +TP+ +Q + + +L
Sbjct: 1396 KNRSSGKTPETLVPTAPKLEPSTSTDQPVTPEPTSQATRGRTNRSSVKTPETVVPTAPEL 1455
Query: 729 PPQRDTPGCATTPPHSQASSVRATRSQQHTP 759
P T T P SQA+ R RS TP
Sbjct: 1456 QPSTSTDQPVTPEPTSQATRGRTDRSSVKTP 1486
Score = 30.4 bits (67), Expect = 6.5
Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 7/129 (5%)
Query: 646 TSEP-GRQTRRPKRRTQLSSSFSL---SGHVDPSEDTSSPHSPEWPPADALPLPPTTPPS 701
TSEP R TR K R+ + + ++ + + PS T P +PE P + A T S
Sbjct: 1507 TSEPTSRTTRGRKNRSSVKTPETVVPAAPELQPSTSTDQPVTPE-PTSRATR--GRTNRS 1563
Query: 702 QELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVL 761
TP++ P Q R+ + P C T + + + P
Sbjct: 1564 SVKTPESIVPIAPELQPSTSRNQLVTPEPTSRATRCRTNRSSVKTPEPVVPTAPEPHPTT 1623
Query: 762 SSSQPLRKK 770
S+ QP+ K
Sbjct: 1624 STDQPVTPK 1632
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,592,541
Number of Sequences: 37866
Number of extensions: 2189396
Number of successful extensions: 10671
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 272
Number of HSP's that attempted gapping in prelim test: 9841
Number of HSP's gapped (non-prelim): 996
length of query: 775
length of database: 18,247,518
effective HSP length: 110
effective length of query: 665
effective length of database: 14,082,258
effective search space: 9364701570
effective search space used: 9364701570
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.