TAF1C 13324

Name: TAF1C	Sequence: fasta or formatted (775aa)		NCBI GI: 21536367
Description: TBP-associated factor 1C isoform 2		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [869aa] TBP-associated factor 1C isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 57 2 C cysteine 2.1 16 1 D aspartate 4.3 33 1 E glutamate 4.6 36 4 F phenylalanine 2.5 19 1 G glycine 8.5 66 2 H histidine 2.3 18 1 I isoleucine 1.4 11 1 K lysine 3.4 26 3 L leucine 14.3 111 3 M methionine 1.3 10 1 N asparagine 0.5 4 1 P proline 11.0 85 3 Q glutamine 7.0 54 2 R arginine 7.6 59 2 S serine 7.2 56 3 T threonine 5.5 43 2 V valine 5.5 43 2 W tryptophan 2.5 19 2 Y tyrosine 1.2 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TBP-associated factor 1C isoform 2 TAF1C 0.987 TBP-associated factor 1C isoform 1 RBBP6 0.012 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.012 retinoblastoma-binding protein 6 isoform 1 FLJ22184 0.011 PREDICTED: hypothetical protein LOC80164 LOC100292723 0.011 PREDICTED: hypothetical protein FLJ22184 0.010 PREDICTED: hypothetical protein FLJ22184 FSCB 0.010 fibrous sheath CABYR binding protein RGS3 0.010 regulator of G-protein signalling 3 isoform 6 [Homo... RGS3 0.010 regulator of G-protein signalling 3 isoform 1 LOC100292378 0.010 PREDICTED: hypothetical protein RGS3 0.009 regulator of G-protein signalling 3 isoform 2 WNK2 0.009 WNK lysine deficient protein kinase 2 MUC2 0.009 mucin 2 precursor PRR12 0.009 proline rich 12 WNK4 0.008 WNK lysine deficient protein kinase 4 ANKRD17 0.008 ankyrin repeat domain protein 17 isoform a ANKRD17 0.008 ankyrin repeat domain protein 17 isoform b SRCAP 0.008 Snf2-related CBP activator protein ZNF469 0.008 zinc finger protein 469 BAT2 0.008 HLA-B associated transcript-2 ARHGAP17 0.008 nadrin isoform 1 ARHGAP17 0.008 nadrin isoform 2 ANKRD34A 0.008 ankyrin repeat domain 34 RSPH4A 0.008 radial spoke head 4 homolog A isoform 2 RSPH4A 0.008 radial spoke head 4 homolog A isoform 1 WIPF1 0.008 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.008 WAS/WASL interacting protein family, member 1 C20orf151 0.008 hypothetical protein LOC140893 MDC1 0.008 mediator of DNA-damage checkpoint 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.