TAF1C 13325

Name: TAF1C	Sequence: fasta or formatted (869aa)		NCBI GI: 21536369
Description: TBP-associated factor 1C isoform 1		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [775aa] TBP-associated factor 1C isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 64 2 C cysteine 2.1 18 1 D aspartate 4.4 38 1 E glutamate 4.5 39 4 F phenylalanine 2.8 24 1 G glycine 8.3 72 2 H histidine 2.4 21 1 I isoleucine 1.4 12 1 K lysine 3.2 28 3 L leucine 14.6 127 3 M methionine 1.4 12 1 N asparagine 0.7 6 1 P proline 11.4 99 3 Q glutamine 6.4 56 2 R arginine 7.0 61 2 S serine 7.5 65 3 T threonine 5.6 49 2 V valine 5.2 45 2 W tryptophan 2.5 22 2 Y tyrosine 1.3 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TBP-associated factor 1C isoform 1 TAF1C 0.875 TBP-associated factor 1C isoform 2 RBBP6 0.011 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.011 retinoblastoma-binding protein 6 isoform 1 FSCB 0.011 fibrous sheath CABYR binding protein FLJ22184 0.010 PREDICTED: hypothetical protein LOC80164 LOC100292723 0.010 PREDICTED: hypothetical protein FLJ22184 0.009 PREDICTED: hypothetical protein FLJ22184 RGS3 0.008 regulator of G-protein signalling 3 isoform 6 [Homo... RGS3 0.008 regulator of G-protein signalling 3 isoform 1 LOC100292378 0.008 PREDICTED: hypothetical protein RGS3 0.008 regulator of G-protein signalling 3 isoform 2 MLL2 0.008 myeloid/lymphoid or mixed-lineage leukemia 2 WNK2 0.008 WNK lysine deficient protein kinase 2 MUC2 0.008 mucin 2 precursor PRR12 0.008 proline rich 12 WNK4 0.007 WNK lysine deficient protein kinase 4 ANKRD17 0.007 ankyrin repeat domain protein 17 isoform a ANKRD17 0.007 ankyrin repeat domain protein 17 isoform b ZNF469 0.007 zinc finger protein 469 BAT2 0.007 HLA-B associated transcript-2 ARHGAP17 0.007 nadrin isoform 1 ARHGAP17 0.007 nadrin isoform 2 RSPH4A 0.007 radial spoke head 4 homolog A isoform 2 RSPH4A 0.007 radial spoke head 4 homolog A isoform 1 WIPF1 0.007 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.007 WAS/WASL interacting protein family, member 1 MDC1 0.007 mediator of DNA-damage checkpoint 1 LOC645722 0.007 PREDICTED: similar to hCG2037003 ANKRD34A 0.007 ankyrin repeat domain 34 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.