Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AGXT2 Sequence: fasta or formatted (514aa) NCBI GI: 13994255
Description:

alanine-glyoxylate aminotransferase 2 precursor

Referenced in:

Amino Acid Biosynthesis and Selected Derivatives

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         34           2
 C cysteine            3.3         17           2
 D aspartate           3.3         17           1
 E glutamate           6.2         32           2
 F phenylalanine       5.4         28           2
 G glycine             8.2         42           2
 H histidine           4.1         21           1
 I isoleucine          5.3         27           2
 K lysine              5.1         26           1
 L leucine             9.1         47           3
 M methionine          3.7         19           1
 N asparagine          2.7         14           2
 P proline             6.0         31           2
 Q glutamine           4.1         21           1
 R arginine            5.1         26           2
 S serine              6.0         31           1
 T threonine           5.4         28           2
 V valine              7.2         37           2
 W tryptophan          1.0          5           1
 Y tyrosine            2.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alanine-glyoxylate aminotransferase 2 precursor [Hom... 
AGXT2L1               0.242   alanine-glyoxylate aminotransferase 2-like 1 isoform...
AGXT2L1               0.225   alanine-glyoxylate aminotransferase 2-like 1 isofor...
AGXT2L1               0.220   alanine-glyoxylate aminotransferase 2-like 1 isofor...
AGXT2L2               0.216   alanine-glyoxylate aminotransferase 2-like 2 
OAT                   0.077   ornithine aminotransferase precursor 
ABAT                  0.054   4-aminobutyrate aminotransferase precursor 
ABAT                  0.054   4-aminobutyrate aminotransferase precursor 
ABAT                  0.054   4-aminobutyrate aminotransferase precursor 
KRTAP10-6             0.008   keratin associated protein 10-6 
KRTAP10-4             0.007   keratin associated protein 10-4 
KRTAP10-7             0.007   keratin associated protein 10-7 
SH3BP2                0.005   SH3-domain binding protein 2 isoform b 
SH3BP2                0.005   SH3-domain binding protein 2 isoform c 
SH3BP2                0.005   SH3-domain binding protein 2 isoform a 
SH3BP2                0.005   SH3-domain binding protein 2 isoform a 
LAMC2                 0.005   laminin, gamma 2 isoform b precursor 
LAMC2                 0.005   laminin, gamma 2 isoform a precursor 
ACCN2                 0.005   amiloride-sensitive cation channel 2, neuronal isofo...
ACCN2                 0.005   amiloride-sensitive cation channel 2, neuronal isofo...
KRTAP10-5             0.004   keratin associated protein 10-5 
KRTAP10-3             0.004   keratin associated protein 10-3 
KRTAP10-1             0.004   keratin associated protein 10-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press