Guide to the Human Genome
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Name: RILPL2 Sequence: fasta or formatted (211aa) NCBI GI: 21450828
Description:

Rab interacting lysosomal protein-like 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3          9           1
 C cysteine            0.5          1           1
 D aspartate           4.7         10           1
 E glutamate          15.6         33           6
 F phenylalanine       2.8          6           3
 G glycine             7.6         16           2
 H histidine           0.5          1           1
 I isoleucine          1.9          4           2
 K lysine              7.1         15           2
 L leucine            12.3         26           2
 M methionine          2.4          5           1
 N asparagine          3.3          7           1
 P proline             6.2         13           2
 Q glutamine           4.7         10           1
 R arginine            8.5         18           2
 S serine              4.7         10           1
 T threonine           3.3          7           1
 V valine              8.1         17           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rab interacting lysosomal protein-like 2 
RILPL1                0.133   Rab interacting lysosomal protein-like 1 
RAI14                 0.036   retinoic acid induced 14 isoform d 
RAI14                 0.036   retinoic acid induced 14 isoform c 
RAI14                 0.036   retinoic acid induced 14 isoform b 
RAI14                 0.036   retinoic acid induced 14 isoform a 
RAI14                 0.036   retinoic acid induced 14 isoform a 
RAI14                 0.036   retinoic acid induced 14 isoform a 
GOLGB1                0.036   golgi autoantigen, golgin subfamily b, macrogolgin ...
ROCK2                 0.036   Rho-associated, coiled-coil containing protein kinas...
CLEC11A               0.036   stem cell growth factor precursor 
RILP                  0.036   Rab interacting lysosomal protein 
SPAG9                 0.033   sperm associated antigen 9 isoform 1 
SPAG9                 0.033   sperm associated antigen 9 isoform 3 
ESF1                  0.033   ABT1-associated protein 
DSP                   0.031   desmoplakin isoform I 
LOC728636             0.031   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC440295             0.031   hypothetical protein LOC440295 
LOC647042             0.028   PREDICTED: hypothetical protein isoform 2 
DCAF8L2               0.028   DDB1 and CUL4 associated factor 8-like 2 
MAPK8IP3              0.028   mitogen-activated protein kinase 8 interacting prote...
GTF3C3                0.026   general transcription factor IIIC, polypeptide 3, 102...
BAZ1B                 0.023   bromodomain adjacent to zinc finger domain, 1B [Homo...
ZFHX3                 0.023   AT-binding transcription factor 1 
TRIP11                0.023   thyroid hormone receptor interactor 11 
WDR70                 0.023   WD repeat domain 70 
ANP32E                0.021   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32E                0.021   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32E                0.021   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
TRH                   0.021   thyrotropin-releasing hormone 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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