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Search of human proteins with 21389567
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens]
(248 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens] 513 e-146
gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Hom... 64 2e-10
gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Hom... 60 1e-09
gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo ... 52 5e-07
gi|31563394 chemokine-like factor superfamily 1 isoform 2 [Homo ... 49 4e-06
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 43 2e-04
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 43 3e-04
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 42 4e-04
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 42 4e-04
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 42 4e-04
gi|93141024 chemokine-like factor isoform e [Homo sapiens] 42 5e-04
gi|8393581 chemokine-like factor isoform a [Homo sapiens] 42 5e-04
gi|4505893 proteolipid protein 2 (colonic epithelium-enriched) [... 41 8e-04
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 40 0.001
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 40 0.002
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 39 0.004
gi|150378549 tangerin [Homo sapiens] 39 0.004
gi|168229174 RNA binding motif protein 27 [Homo sapiens] 38 0.009
gi|4505353 heparan glucosaminyl N-deacetylase/N-sulfotransferase... 37 0.012
gi|224493919 zinc finger and SCAN domain containing 18 isoform 2... 37 0.021
gi|224493912 zinc finger and SCAN domain containing 18 isoform 3... 37 0.021
gi|226371704 zinc finger and SCAN domain containing 18 isoform 3... 37 0.021
gi|224493905 zinc finger and SCAN domain containing 18 isoform 1... 37 0.021
gi|119120918 coiled-coil domain containing 64 [Homo sapiens] 37 0.021
gi|110349719 titin isoform N2-A [Homo sapiens] 36 0.027
gi|108773787 retinoblastoma 1 [Homo sapiens] 36 0.027
gi|4826908 phosphoinositide-3-kinase, regulatory subunit 2 (beta... 36 0.036
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 36 0.036
gi|116734689 socius isoform 3 [Homo sapiens] 36 0.036
gi|116734681 socius isoform 1 [Homo sapiens] 36 0.036
>gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens]
Length = 248
Score = 513 bits (1321), Expect = e-146
Identities = 248/248 (100%), Positives = 248/248 (100%)
Query: 1 MAPKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKH 60
MAPKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKH
Sbjct: 1 MAPKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKH 60
Query: 61 EVGTRRGCRRYRWELKDSNKEFWLLGHAEIKIRSLGCLIAAMILLSSLTVHPILRLIITM 120
EVGTRRGCRRYRWELKDSNKEFWLLGHAEIKIRSLGCLIAAMILLSSLTVHPILRLIITM
Sbjct: 61 EVGTRRGCRRYRWELKDSNKEFWLLGHAEIKIRSLGCLIAAMILLSSLTVHPILRLIITM 120
Query: 121 EISFFSFFILLYSFAIHRYIPFILWPISDLFNDLIACAFLVGAVVFAVRSRRSMNLHYLL 180
EISFFSFFILLYSFAIHRYIPFILWPISDLFNDLIACAFLVGAVVFAVRSRRSMNLHYLL
Sbjct: 121 EISFFSFFILLYSFAIHRYIPFILWPISDLFNDLIACAFLVGAVVFAVRSRRSMNLHYLL 180
Query: 181 AVILIGAAGVFAFIDVCLQRNHFRGKKAKKHMLVPPPGKEKGPQQGKGPEPAKPPEPGKP 240
AVILIGAAGVFAFIDVCLQRNHFRGKKAKKHMLVPPPGKEKGPQQGKGPEPAKPPEPGKP
Sbjct: 181 AVILIGAAGVFAFIDVCLQRNHFRGKKAKKHMLVPPPGKEKGPQQGKGPEPAKPPEPGKP 240
Query: 241 PGPAKGKK 248
PGPAKGKK
Sbjct: 241 PGPAKGKK 248
>gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Homo
sapiens]
Length = 286
Score = 63.5 bits (153), Expect = 2e-10
Identities = 58/255 (22%), Positives = 101/255 (39%), Gaps = 27/255 (10%)
Query: 3 PKAAKGAKPEPAPAPPPP--------GAKPEEDKKDGKEPSDK-----PQKAVQDHKEPS 49
PKA + + AP P A +G PS K P K PS
Sbjct: 38 PKAQRNISAKTAPRKHPAVSIRSAQSAAAARPQGSEGTAPSRKATTRPPPKPTLPPPTPS 97
Query: 50 DKPQKAVQPKHEVGTR-RGCRRYRWELKDSNKEFWLLGHAEIKIRSLGCLIAAMILLSSL 108
+ + + + R G + ++ +DS K F +KI L ++ A+
Sbjct: 98 AHTESKLLNEMAIKERVEGRAKVPYKFRDSLKRFSFSPTGMLKILRLSLILGALACFIIT 157
Query: 109 TVHPILRLIITMEISFFSFFILLYSFAIHRYIPFILWPISDLFNDLIACAFLVGAVVFAV 168
+ I ++EI FFIL+Y +H + ++ WP+ DL N +I FL + A+
Sbjct: 158 QANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAM 217
Query: 169 RSRRSMNLHYL---LAVILIGAAGVFAFIDVCLQRNH---FRGKKAKKHMLVPPPGKEKG 222
+ ++ +L Y+ L + + + AF+ R + F G + ++ + P K+
Sbjct: 218 QEKKRRHLLYVGGSLCLTAVIVCCIDAFVVTTKMRTNLKRFLGVEVERKL---SPAKDAY 274
Query: 223 PQQGKGPEPAKPPEP 237
P+ G P P P
Sbjct: 275 PETG----PDAPQRP 285
>gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Homo
sapiens]
Length = 231
Score = 60.5 bits (145), Expect = 1e-09
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 14/191 (7%)
Query: 3 PKAAKGAKPEPAPAPPPP--------GAKPEEDKKDGKEPSDK-----PQKAVQDHKEPS 49
PKA + + AP P A +G PS K P K PS
Sbjct: 38 PKAQRNISAKTAPRKHPAVSIRSAQSAAAARPQGSEGTAPSRKATTRPPPKPTLPPPTPS 97
Query: 50 DKPQKAVQPKHEVGTR-RGCRRYRWELKDSNKEFWLLGHAEIKIRSLGCLIAAMILLSSL 108
+ + + + R G + ++ +DS K F +KI L ++ A+
Sbjct: 98 AHTESKLLNEMAIKERVEGRAKVPYKFRDSLKRFSFSPTGMLKILRLSLILGALACFIIT 157
Query: 109 TVHPILRLIITMEISFFSFFILLYSFAIHRYIPFILWPISDLFNDLIACAFLVGAVVFAV 168
+ I ++EI FFIL+Y +H + ++ WP+ DL N +I FL + A+
Sbjct: 158 QANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAM 217
Query: 169 RSRRSMNLHYL 179
+ ++ +L Y+
Sbjct: 218 QEKKRRHLLYV 228
>gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo
sapiens]
Length = 169
Score = 52.0 bits (123), Expect = 5e-07
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 20/150 (13%)
Query: 94 SLGCLIAAMILLSSLTVHPILRLIITMEISFFSFFILLYSFAIHRYIPFILWPISDLFND 153
+L C I S +T I ++EI FFIL+Y +H + ++ WP+ DL N
Sbjct: 33 ALACFIITQANESFIT-------ITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNS 85
Query: 154 LIACAFLVGAVVFAVRSRRSMNLHYL---LAVILIGAAGVFAFIDVCLQRNH---FRGKK 207
+I FL + A++ ++ +L Y+ L + + + AF+ R + F G +
Sbjct: 86 IITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCIDAFVVTTKMRTNLKRFLGVE 145
Query: 208 AKKHMLVPPPGKEKGPQQGKGPEPAKPPEP 237
++ + P K+ P+ G P P P
Sbjct: 146 VERKL---SPAKDAYPETG----PDAPQRP 168
>gi|31563394 chemokine-like factor superfamily 1 isoform 2 [Homo
sapiens]
Length = 114
Score = 48.9 bits (115), Expect = 4e-06
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 94 SLGCLIAAMILLSSLTVHPILRLIITMEISFFSFFILLYSFAIHRYIPFILWPISDLFND 153
+L C I S +T I ++EI FFIL+Y +H + ++ WP+ DL N
Sbjct: 33 ALACFIITQANESFIT-------ITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNS 85
Query: 154 LIACAFLVGAVVFAVRSRRSMNLHYL 179
+I FL + A++ ++ +L Y+
Sbjct: 86 IITAVFLSVVAILAMQEKKRRHLLYV 111
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 43.1 bits (100), Expect = 2e-04
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 216 PPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
PPGK +GP Q +G +P PP PGKP GP
Sbjct: 179 PPGKPQGPPQQEGNKPQGPPPPGKPQGP 206
Score = 39.7 bits (91), Expect = 0.002
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 209 KKHMLVPPPGK-EKGPQQGKGPEPAKPPEPGKPPGP 243
+ H PPPGK E+ P QG PP PGKP GP
Sbjct: 130 QSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGP 165
Score = 37.4 bits (85), Expect = 0.012
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 13/47 (27%)
Query: 215 PPPGKEKGP-------QQ------GKGPEPAKPPEPGKPPGPAKGKK 248
PPPGK +GP QQ GK P PP+ G+PP PA+G++
Sbjct: 198 PPPGKPQGPPPAGGNPQQPQAPPAGKPQGPPPPPQGGRPPRPAQGQQ 244
Score = 36.2 bits (82), Expect = 0.027
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 215 PPPGKEKG-PQQGKGPEPAKPPEPGKPPG-PAKG 246
PPPGK +G P QG PP PGKP G P +G
Sbjct: 52 PPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQG 85
Score = 35.8 bits (81), Expect = 0.036
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 215 PPPGKEKG-PQQGKGPEPAKPPEPGKPPGP 243
PPPGK +G P QG PP PGKP P
Sbjct: 73 PPPGKPEGRPPQGGNQSQGPPPHPGKPERP 102
Score = 34.3 bits (77), Expect = 0.10
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 215 PPPGK-EKGPQQGKGPEPAKPPEPGKPPGP 243
PPPGK E+ P QG PP PGKP P
Sbjct: 115 PPPGKPERPPPQGGNQSHRPPPPPGKPERP 144
Score = 31.6 bits (70), Expect = 0.67
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 215 PPPGK-EKGPQQGKGPEPAKPPEPGKPPGP 243
P PGK E+ P QG PP PGKP P
Sbjct: 94 PHPGKPERPPPQGGNQSQGTPPPPGKPERP 123
Score = 28.9 bits (63), Expect = 4.3
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 218 GKEKGPQQGKGPEPAKPPEP-GKPPGP 243
GK +G + G +P +PP P GKP GP
Sbjct: 34 GKPEGRRPQGGNQPQRPPPPPGKPQGP 60
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 42.7 bits (99), Expect = 3e-04
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
PPPGK +GP G +P PP PGKP GP
Sbjct: 174 PPPGKPQGPPPQGGKKPQGPPPPGKPQGP 202
Score = 42.4 bits (98), Expect = 4e-04
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
PPPGK +GP G +P PP PGKP GP
Sbjct: 52 PPPGKPQGPPPQGGNKPQGPPPPGKPQGP 80
Score = 42.4 bits (98), Expect = 4e-04
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
PPPGK +GP G +P PP PGKP GP
Sbjct: 235 PPPGKPQGPPPQGGNKPQGPPPPGKPQGP 263
Score = 42.0 bits (97), Expect = 5e-04
Identities = 17/29 (58%), Positives = 18/29 (62%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
PPPGK +GP G P PP PGKP GP
Sbjct: 113 PPPGKPQGPPPQGGNRPQGPPPPGKPQGP 141
Score = 36.6 bits (83), Expect = 0.021
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 216 PPGKEKGPQQGKGPEP-AKPPEPGKPPGPAK--GKK 248
PPGK +GP G +P PP PGKP GP GKK
Sbjct: 154 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKK 189
Score = 36.2 bits (82), Expect = 0.027
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 216 PPGKEKGPQQGKGPEP-AKPPEPGKPPGP 243
PPGK +GP G +P PP PGKP GP
Sbjct: 93 PPGKPQGPPPQGGNQPQGPPPPPGKPQGP 121
Score = 36.2 bits (82), Expect = 0.027
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 216 PPGKEKGPQQGKGPEP-AKPPEPGKPPGP 243
PPGK +GP G +P PP PGKP GP
Sbjct: 215 PPGKPQGPPPQGGNQPQGPPPPPGKPQGP 243
Score = 33.9 bits (76), Expect = 0.14
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 215 PPPGKEKGP--QQGKGPEPAKPPEPGKPPGP 243
PPPGK +GP Q G + A+ P PGKP GP
Sbjct: 255 PPPGKPQGPPAQGGSKSQSARSP-PGKPQGP 284
Score = 33.1 bits (74), Expect = 0.23
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 215 PPPGKEKG--PQQGKGPEPAKPPEPGKPPGP 243
PPPGK +G PQ K P P PGKP GP
Sbjct: 72 PPPGKPQGPPPQGDKSRSPRSP--PGKPQGP 100
Score = 33.1 bits (74), Expect = 0.23
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 215 PPPGKEKG--PQQGKGPEPAKPPEPGKPPGP 243
PPPGK +G PQ K P P PGKP GP
Sbjct: 133 PPPGKPQGPPPQGDKSRSPRSP--PGKPQGP 161
Score = 32.7 bits (73), Expect = 0.30
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 209 KKHMLVPPPGKEKG-PQQGKGPEPAKPPEPGKPPGP 243
KK PPPGK +G P QG ++ P PGKP GP
Sbjct: 188 KKPQGPPPPGKPQGPPPQGDKSRSSQSP-PGKPQGP 222
Score = 32.7 bits (73), Expect = 0.30
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 216 PPGKEKGPQQGKGPEPAKPPEP--GKPPGP 243
PPGK +GP Q +G P PP P G P P
Sbjct: 277 PPGKPQGPPQQEGNNPQGPPPPAGGNPQQP 306
Score = 28.9 bits (63), Expect = 4.3
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 218 GKEKGPQQGKGPEP-AKPPEPGKPPGP 243
G +GP G +P PP PGKP GP
Sbjct: 34 GNPQGPSPQGGNKPQGPPPPPGKPQGP 60
Score = 28.5 bits (62), Expect = 5.7
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query: 3 PKAAKGAKPEPAPAPP--PPGAKPEEDKK-DGKEPSDKPQ------KAVQDHKEPSDKPQ 53
P G +P+ P PP P G P+ KK G P KPQ + + P KPQ
Sbjct: 161 PPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQ 220
Score = 28.5 bits (62), Expect = 5.7
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 3 PKAAKGAKPEPAPAP-PPPGAKPEEDK-KDGKEPSDKPQ-KAVQDHKEPSDKPQKAVQPK 59
P G KP+ P P P G P+ DK + + P KPQ Q +P P +P+
Sbjct: 182 PPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 241
Score = 28.1 bits (61), Expect = 7.4
Identities = 18/69 (26%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Query: 3 PKAAKGAKPEPAP------APPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAV 56
P G KP+ P PPP G K + +P P + + P P K
Sbjct: 60 PPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 119
Query: 57 QPKHEVGTR 65
P + G R
Sbjct: 120 GPPPQGGNR 128
Score = 28.1 bits (61), Expect = 7.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPP 241
PPP PQQ + P +P P +PP
Sbjct: 295 PPPPAGGNPQQPQAPPAGQPQGPPRPP 321
Score = 27.7 bits (60), Expect = 9.7
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 9/60 (15%)
Query: 3 PKAAKGAKPEPAPAPP------PP--GAKPEEDKKDGKEPSDKPQ-KAVQDHKEPSDKPQ 53
P G KP+ P PP PP G KP+ GK PQ + + P KPQ
Sbjct: 39 PSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQ 98
Score = 27.7 bits (60), Expect = 9.7
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 16/64 (25%)
Query: 3 PKAAKGAKPEPAPAPPPPGAKPE------EDKKDGKEPSDKPQ-------KAVQDHKEPS 49
P G +P+ PPPP KP+ +K G P KPQ Q + P
Sbjct: 222 PPPQGGNQPQ---GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPP 278
Query: 50 DKPQ 53
KPQ
Sbjct: 279 GKPQ 282
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 42.4 bits (98), Expect = 4e-04
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
PPPGK +GP G +P PP PGKP GP
Sbjct: 73 PPPGKPQGPPPQGGNKPQGPPPPGKPQGP 101
Score = 42.4 bits (98), Expect = 4e-04
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
PPPGK +GP G +P PP PGKP GP
Sbjct: 134 PPPGKPQGPPPQGGNKPQGPPPPGKPQGP 162
Score = 42.4 bits (98), Expect = 4e-04
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
PPPGK +GP G +P PP PGKP GP
Sbjct: 196 PPPGKPQGPPPQGGNKPQGPPPPGKPQGP 224
Score = 42.4 bits (98), Expect = 4e-04
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
PPPGK +GP G +P PP PGKP GP
Sbjct: 258 PPPGKPQGPPPQGGNKPQGPPPPGKPQGP 286
Score = 42.4 bits (98), Expect = 4e-04
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
PPPGK +GP G +P PP PGKP GP
Sbjct: 320 PPPGKPQGPPPQGGNKPQGPPPPGKPQGP 348
Score = 36.2 bits (82), Expect = 0.027
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 216 PPGKEKGPQQGKGPEP-AKPPEPGKPPGP 243
PPGK +GP G +P PP PGKP GP
Sbjct: 53 PPGKPQGPPPQGGNQPQGPPPPPGKPQGP 81
Score = 36.2 bits (82), Expect = 0.027
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 216 PPGKEKGPQQGKGPEP-AKPPEPGKPPGP 243
PPGK +GP G +P PP PGKP GP
Sbjct: 114 PPGKPQGPPPQGGNQPQGPPPPPGKPQGP 142
Score = 36.2 bits (82), Expect = 0.027
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 216 PPGKEKGPQQGKGPEP-AKPPEPGKPPGP 243
PPGK +GP G +P PP PGKP GP
Sbjct: 176 PPGKPQGPPPQGGNQPQGPPPPPGKPQGP 204
Score = 36.2 bits (82), Expect = 0.027
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 216 PPGKEKGPQQGKGPEP-AKPPEPGKPPGP 243
PPGK +GP G +P PP PGKP GP
Sbjct: 238 PPGKPQGPPPQGGNQPQGPPPPPGKPQGP 266
Score = 36.2 bits (82), Expect = 0.027
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 216 PPGKEKGPQQGKGPEP-AKPPEPGKPPGP 243
PPGK +GP G +P PP PGKP GP
Sbjct: 300 PPGKPQGPPPQGGNQPQGPPPPPGKPQGP 328
Score = 33.1 bits (74), Expect = 0.23
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 215 PPPGKEKG--PQQGKGPEPAKPPEPGKPPGP 243
PPPGK +G PQ K P P PGKP GP
Sbjct: 93 PPPGKPQGPPPQGDKSRSPRSP--PGKPQGP 121
Score = 33.1 bits (74), Expect = 0.23
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 215 PPPGKEKGP--QQGKGPEPAKPPEPGKPPGP 243
PPPGK +GP Q G A+ P PGKP GP
Sbjct: 340 PPPGKPQGPPPQGGSKSRSARSP-PGKPQGP 369
Score = 32.7 bits (73), Expect = 0.30
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 215 PPPGKEKGPQ-QGKGPEPAKPPEPGKPPGP 243
PPPGK +GP QG + PGKP GP
Sbjct: 154 PPPGKPQGPPPQGDNKSRSSRSPPGKPQGP 183
Score = 32.7 bits (73), Expect = 0.30
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 215 PPPGKEKGPQ-QGKGPEPAKPPEPGKPPGP 243
PPPGK +GP QG + PGKP GP
Sbjct: 216 PPPGKPQGPPPQGDNKSQSARSPPGKPQGP 245
Score = 32.7 bits (73), Expect = 0.30
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 216 PPGKEKGPQQGKGPEPAKPPEP--GKPPGP 243
PPGK +GP Q +G P PP P G P P
Sbjct: 362 PPGKPQGPPQQEGNNPQGPPPPAGGNPQQP 391
Score = 32.3 bits (72), Expect = 0.39
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 215 PPPGKEKGPQ-QGKGPEPAKPPEPGKPPGP 243
PPPGK +GP QG + PGKP GP
Sbjct: 278 PPPGKPQGPPPQGGSKSRSSRSPPGKPQGP 307
Score = 28.1 bits (61), Expect = 7.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPP 241
PPP PQQ + P +P P +PP
Sbjct: 380 PPPPAGGNPQQPQAPPAGQPQGPPRPP 406
Score = 27.7 bits (60), Expect = 9.7
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 3 PKAAKGAKPEPAPAP-PPPGAKPEEDK-KDGKEPSDKPQ-KAVQDHKEPSDKPQKAVQPK 59
P G KP+ P P P G P+ DK + + P KPQ Q +P P +P+
Sbjct: 81 PPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 140
Score = 27.7 bits (60), Expect = 9.7
Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 20/72 (27%)
Query: 2 APKAAKGAKPEPAP-------APPPPGAKPE------EDKKDGKEPSDKPQ-------KA 41
+P++ G P P PPPP KP+ +K G P KPQ
Sbjct: 110 SPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNK 169
Query: 42 VQDHKEPSDKPQ 53
+ + P KPQ
Sbjct: 170 SRSSRSPPGKPQ 181
Score = 27.7 bits (60), Expect = 9.7
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 16/64 (25%)
Query: 3 PKAAKGAKPEPAPAPPPPGAKPE------EDKKDGKEPSDKPQ-------KAVQDHKEPS 49
P G +P+ PPPP KP+ +K G P KPQ Q + P
Sbjct: 183 PPPQGGNQPQ---GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPP 239
Query: 50 DKPQ 53
KPQ
Sbjct: 240 GKPQ 243
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 42.4 bits (98), Expect = 4e-04
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
PPPGK +GP G +P PP PGKP GP
Sbjct: 52 PPPGKPQGPPPQGGNKPQGPPPPGKPQGP 80
Score = 33.1 bits (74), Expect = 0.23
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 215 PPPGKEKG--PQQGKGPEPAKPPEPGKPPGP 243
PPPGK +G PQ K P P PGKP GP
Sbjct: 72 PPPGKPQGPPPQGDKSRSPRSP--PGKPQGP 100
Score = 32.7 bits (73), Expect = 0.30
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 216 PPGKEKGPQQGKGPEPAKPPEP--GKPPGP 243
PPGK +GP Q +G P PP P G P P
Sbjct: 124 PPGKPQGPPQQEGNNPQGPPPPAGGNPQQP 153
Score = 28.9 bits (63), Expect = 4.3
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 218 GKEKGPQQGKGPEP-AKPPEPGKPPGP 243
G +GP G +P PP PGKP GP
Sbjct: 34 GNPQGPSPQGGNKPQGPPPPPGKPQGP 60
Score = 28.9 bits (63), Expect = 4.3
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 5/33 (15%)
Query: 215 PPP--GKEKGP--QQGKGPEPAKPPEPGKPPGP 243
PPP GK +GP Q G + A+ P PGKP GP
Sbjct: 100 PPPQGGKPQGPPAQGGSKSQSARSP-PGKPQGP 131
Score = 28.1 bits (61), Expect = 7.4
Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 10/73 (13%)
Query: 3 PKAAKGAKPEPAPAPP------PP--GAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQK 54
P G KP+ P PP PP G KP+ GK PQ + P P K
Sbjct: 39 PSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG--DKSRSPRSPPGK 96
Query: 55 AVQPKHEVGTRRG 67
P + G +G
Sbjct: 97 PQGPPPQGGKPQG 109
Score = 28.1 bits (61), Expect = 7.4
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 10/28 (35%)
Query: 216 PPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
PPGK +GP PP+ GKP GP
Sbjct: 93 PPGKPQGP----------PPQGGKPQGP 110
Score = 28.1 bits (61), Expect = 7.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPP 241
PPP PQQ + P +P P +PP
Sbjct: 142 PPPPAGGNPQQPQAPPAGQPQGPPRPP 168
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 42.4 bits (98), Expect = 4e-04
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
PPPGK +GP G +P PP PGKP GP
Sbjct: 52 PPPGKPQGPPPQGGNKPQGPPPPGKPQGP 80
Score = 37.4 bits (85), Expect = 0.012
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 215 PPP--GKEKGPQQGKGPEPAKPPEPGKPPGP 243
PPP GK +GP G +P PP PGKP GP
Sbjct: 100 PPPQGGKPQGPPPQGGNKPQGPPPPGKPQGP 130
Score = 33.9 bits (76), Expect = 0.14
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 215 PPPGKEKGP--QQGKGPEPAKPPEPGKPPGP 243
PPPGK +GP Q G + A+ P PGKP GP
Sbjct: 122 PPPGKPQGPPAQGGSKSQSARSP-PGKPQGP 151
Score = 33.1 bits (74), Expect = 0.23
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 215 PPPGKEKG--PQQGKGPEPAKPPEPGKPPGP 243
PPPGK +G PQ K P P PGKP GP
Sbjct: 72 PPPGKPQGPPPQGDKSRSPRSP--PGKPQGP 100
Score = 32.7 bits (73), Expect = 0.30
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 216 PPGKEKGPQQGKGPEPAKPPEP--GKPPGP 243
PPGK +GP Q +G P PP P G P P
Sbjct: 144 PPGKPQGPPQQEGNNPQGPPPPAGGNPQQP 173
Score = 29.6 bits (65), Expect = 2.5
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 17/68 (25%)
Query: 3 PKAAKGAKPEPAPA----PPPPGAKPE------EDKKDGKEPSDKPQ-------KAVQDH 45
P+ K P P PPP G KP+ +K G P KPQ Q
Sbjct: 82 PQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSA 141
Query: 46 KEPSDKPQ 53
+ P KPQ
Sbjct: 142 RSPPGKPQ 149
Score = 28.9 bits (63), Expect = 4.3
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 218 GKEKGPQQGKGPEP-AKPPEPGKPPGP 243
G +GP G +P PP PGKP GP
Sbjct: 34 GNPQGPSPQGGNKPQGPPPPPGKPQGP 60
Score = 28.1 bits (61), Expect = 7.4
Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 10/73 (13%)
Query: 3 PKAAKGAKPEPAPAPP------PP--GAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQK 54
P G KP+ P PP PP G KP+ GK PQ + P P K
Sbjct: 39 PSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG--DKSRSPRSPPGK 96
Query: 55 AVQPKHEVGTRRG 67
P + G +G
Sbjct: 97 PQGPPPQGGKPQG 109
Score = 28.1 bits (61), Expect = 7.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPP 241
PPP PQQ + P +P P +PP
Sbjct: 162 PPPPAGGNPQQPQAPPAGQPQGPPRPP 188
>gi|93141024 chemokine-like factor isoform e [Homo sapiens]
Length = 113
Score = 42.0 bits (97), Expect = 5e-04
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 82 FWLLGHAEIKIRSLGCLIAAMILLSSLTVHPILRLIITMEISFFSFFILLYSFAIHRYIP 141
F + GH +K+ L + +M +I E++ FFILLY + R +
Sbjct: 15 FSVKGH--VKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMK 72
Query: 142 FILWPISDLFNDLIACAFLVGAVVFAV 168
++ WP+ D+ N L+ F++ V A+
Sbjct: 73 WLFWPLLDIINSLVTTVFMLIVSVLAL 99
>gi|8393581 chemokine-like factor isoform a [Homo sapiens]
Length = 152
Score = 42.0 bits (97), Expect = 5e-04
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 82 FWLLGHAEIKIRSLGCLIAAMILLSSLTVHPILRLIITMEISFFSFFILLYSFAIHRYIP 141
F + GH +K+ L + +M +I E++ FFILLY + R +
Sbjct: 15 FSVKGH--VKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMK 72
Query: 142 FILWPISDLFNDLIACAFLVGAVVFAV 168
++ WP+ D+ N L+ F++ V A+
Sbjct: 73 WLFWPLLDIINSLVTTVFMLIVSVLAL 99
>gi|4505893 proteolipid protein 2 (colonic epithelium-enriched)
[Homo sapiens]
Length = 152
Score = 41.2 bits (95), Expect = 8e-04
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 11/102 (10%)
Query: 98 LIAAMILLSSLTVHPILRLIITMEISFFSFFILLYSFAIHRYIPFILWPISDLFNDLIAC 157
++ +IL+ P + +E+ + F ++Y +H IPFI WP SD F LIA
Sbjct: 33 ILCLVILICFSASTPGYSSLSVIEMILAAIFFVVYMCDLHTKIPFINWPWSDFFRTLIAA 92
Query: 158 -AFLVGAVVFAVRSRRSMNLHYLLAVILIGAAGVFAFIDVCL 198
+L+ ++V V + AGV I CL
Sbjct: 93 ILYLITSIVVLVERGNHSKI----------VAGVLGLIATCL 124
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 40.4 bits (93), Expect = 0.001
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
P PGK +GP +G +P +PP PG+P GP
Sbjct: 241 PHPGKPQGPPPQEGNKPQRPPPPGRPQGP 269
Score = 38.9 bits (89), Expect = 0.004
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 215 PPPGKEKG-PQQGKGPEPAKPPEPGKPPGP 243
PPPGK +G P QG PP PGKP GP
Sbjct: 52 PPPGKPEGRPPQGGNQSQGPPPRPGKPEGP 81
Score = 35.8 bits (81), Expect = 0.036
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 215 PPPGKEKGPQQGKGPEP-AKPPEPGKPPGP 243
P PGK +GP G +P PP PGKP GP
Sbjct: 220 PRPGKPEGPPSQGGNKPQGPPPHPGKPQGP 249
Score = 35.4 bits (80), Expect = 0.046
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 215 PPPGKEKG-PQQGKGPEPAKPPEPGKPPGP 243
P PGK +G P QG PP PGKP GP
Sbjct: 94 PRPGKPEGQPPQGGNQSQGPPPRPGKPEGP 123
Score = 35.4 bits (80), Expect = 0.046
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 215 PPPGKEKGPQ-QGKGPEPAKPPEPGKPPGP 243
P PGK +GP QG PP PGKP GP
Sbjct: 115 PRPGKPEGPPPQGGNQSQGPPPRPGKPEGP 144
Score = 35.4 bits (80), Expect = 0.046
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 215 PPPGKEKGPQ-QGKGPEPAKPPEPGKPPGP 243
P PGK +GP QG PP PGKP GP
Sbjct: 136 PRPGKPEGPPPQGGNQSQGPPPRPGKPEGP 165
Score = 35.4 bits (80), Expect = 0.046
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 215 PPPGKEKGPQ-QGKGPEPAKPPEPGKPPGP 243
P PGK +GP QG PP PGKP GP
Sbjct: 157 PRPGKPEGPPPQGGNQSQGPPPHPGKPEGP 186
Score = 35.4 bits (80), Expect = 0.046
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 215 PPPGKEKGPQ-QGKGPEPAKPPEPGKPPGP 243
P PGK +GP QG PP PGKP GP
Sbjct: 178 PHPGKPEGPPPQGGNQSQGPPPRPGKPEGP 207
Score = 35.4 bits (80), Expect = 0.046
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 215 PPPGKEKGPQ-QGKGPEPAKPPEPGKPPGP 243
P PGK +GP QG PP PGKP GP
Sbjct: 199 PRPGKPEGPPPQGGNQSQGPPPRPGKPEGP 228
Score = 35.4 bits (80), Expect = 0.046
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 206 KKAKKHMLVPPPGKEKGPQQ-GKGPEPAKPPEPGKPPGP 243
++ K PPPG+ +GP G P+ PP GKP GP
Sbjct: 252 QEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGP 290
Score = 33.1 bits (74), Expect = 0.23
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 215 PPPGKEKGPQ-QGKGPEPAKPPEPGKPPG-PAKG 246
P PGK +GP QG PP PGKP G P +G
Sbjct: 73 PRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQG 106
Score = 29.6 bits (65), Expect = 2.5
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 15/62 (24%)
Query: 3 PKAAKGAKPEPAP------APPPPGAKPEE------DKKDGKEPSDKPQKAVQDHKEPSD 50
P +G KP+ P PPPPG P++ K G P P + + H+ P
Sbjct: 249 PPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPP---PPQGGRPHRPPQG 305
Query: 51 KP 52
+P
Sbjct: 306 QP 307
Score = 28.5 bits (62), Expect = 5.7
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Query: 3 PKAAKGAKPEPAPAPP--PPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQP 58
P + G KP+ P P P G P+E K + P P Q P PQ+ + P
Sbjct: 228 PPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPP---PPGRPQGPPPPGGNPQQPLPP 282
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 39.7 bits (91), Expect = 0.002
Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGPA 244
P PG +GP+ G GPEP +PP PG PP PA
Sbjct: 910 PQPGS-RGPRDGLGPEPQEPP-PGPPPSPA 937
Score = 28.9 bits (63), Expect = 4.3
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 10/93 (10%)
Query: 2 APKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKHE 61
+P +A P P P P PG E +G+EP +P + ++ P P + E
Sbjct: 44 SPPSADVNSPPPLPPPTSPGGPKE---LEGQEPEPRPTE--EEPGSPWSGPDEL-----E 93
Query: 62 VGTRRGCRRYRWELKDSNKEFWLLGHAEIKIRS 94
+ G RR R L + W H ++ R+
Sbjct: 94 PVVQDGQRRIRARLSLATGLSWGPFHGSVQTRA 126
Score = 28.5 bits (62), Expect = 5.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 214 VPPPGKEKGPQQGKGPEPAKPPEPGKPPGPAKG 246
+PPP GP++ +G EP P +P P G
Sbjct: 56 LPPPTSPGGPKELEGQEPEPRPTEEEPGSPWSG 88
Score = 27.7 bits (60), Expect = 9.7
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 11/56 (19%)
Query: 5 AAKGAKPEPAP-APPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPK 59
A +G P PAP A P PG++ D G EP + P P P A P+
Sbjct: 896 ADRGPSPAPAPAASPQPGSRGPRDGL-GPEPQEPP---------PGPPPSPAAAPE 941
Score = 27.7 bits (60), Expect = 9.7
Identities = 21/68 (30%), Positives = 23/68 (33%), Gaps = 8/68 (11%)
Query: 3 PKAAKGAKP-EPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKHE 61
P+ G +P EP P PPP A E P K VQ P K
Sbjct: 917 PRDGLGPEPQEPPPGPPPSPAAAPEAVPPPPAPPSYSDKGVQ-------TPSKGTPAPLP 969
Query: 62 VGTRRGCR 69
G R CR
Sbjct: 970 NGNHRYCR 977
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 38.9 bits (89), Expect = 0.004
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 2 APKAAKGAKPEPAPAPPPPGAK-PEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKH 60
+P A+ PE A +P AK PE+ K KE + P+KA KE + P+KA P
Sbjct: 668 SPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVK 727
Query: 61 E 61
E
Sbjct: 728 E 728
Score = 38.5 bits (88), Expect = 0.005
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 2 APKAAKGAKPEPAPAPPPPGAK-PEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKH 60
+P A+ PE A +P AK PE+ K KE + P+KA KE + P+KA P
Sbjct: 682 SPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVK 741
Query: 61 E 61
E
Sbjct: 742 E 742
Score = 36.2 bits (82), Expect = 0.027
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 2 APKAAKGAKPEPAPAPPPPGAK-PEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPK 59
+P + PE A +P AK PE+ K KE + P+KA KE + P+KA P+
Sbjct: 696 SPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPE 754
Score = 34.7 bits (78), Expect = 0.079
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 2 APKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQP 58
+P AK E A +P + PE+ K KE + P+KA KE + P+KA P
Sbjct: 614 SPAEAKSPVKEEAKSPAEVKS-PEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSP 669
Score = 34.3 bits (77), Expect = 0.10
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 2 APKAAKGAKPEPAPAPPPPGAK-PEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQP 58
A A+ PE A +P AK PE+ K KE + P+KA K + P+KA P
Sbjct: 626 AKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSP 683
Score = 33.9 bits (76), Expect = 0.14
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 2 APKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKHE 61
+P+A AK E A P PE+ K KE P+KA KE + P+K + K E
Sbjct: 763 SPEAKTPAKEE---ARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEE 819
Query: 62 V 62
V
Sbjct: 820 V 820
Score = 33.1 bits (74), Expect = 0.23
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 2 APKAAKGAKPEPAPAPPPPGAKPEED-----KKDGKEPSD--KPQKAVQDHKEPSDKPQK 54
A A+ PE A +P AK + K++ K P++ P+KA KE + P+K
Sbjct: 592 AKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEK 651
Query: 55 AVQPKHE 61
A P+ E
Sbjct: 652 AKSPEKE 658
Score = 33.1 bits (74), Expect = 0.23
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 2 APKAAKGAKPEPAPAPPPPGAK-PEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKH 60
+P + PE A +P AK PE+ K K + P+KA K + P+KA P
Sbjct: 640 SPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVK 699
Query: 61 E 61
E
Sbjct: 700 E 700
Score = 31.6 bits (70), Expect = 0.67
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 2 APKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSD--KPQKAVQDHKEPSDKPQKAVQPK 59
+P+ AK E A +PP PE K++ K P++ P+KA KE + P +A P+
Sbjct: 546 SPEKAKSPAKEEAKSPPE-AKSPE--KEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPE 602
Score = 31.6 bits (70), Expect = 0.67
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Query: 7 KGAKPEPAPAPPPPGAKPEEDKKDGKEPSDK---PQKAVQDHKEPS-DKPQKA-VQPKHE 61
K A+ E APA P K EE K KE + K P+ V++ KEP+ +KP+++ V+ K E
Sbjct: 840 KKAEEEKAPATP----KTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKE 895
Score = 31.2 bits (69), Expect = 0.88
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 2 APKAAKGAKPEPAPAPP------PPGAKPEEDKKDGKEPSD--KPQKAVQDHKEPSDKPQ 53
+P A + A PE P P +K++ K P++ P+KA KE + P
Sbjct: 503 SPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPP 562
Query: 54 KAVQPKHE 61
+A P+ E
Sbjct: 563 EAKSPEKE 570
Score = 30.4 bits (67), Expect = 1.5
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 206 KKAKKHMLVPPPGKEKGP--QQGKGPEPAKPPEPGKPPGPAKGK 247
++AK V P K K P ++ K PE AK PE + P K K
Sbjct: 624 EEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAK 667
Score = 30.4 bits (67), Expect = 1.5
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 14/67 (20%)
Query: 9 AKPEPAPAPPPPGAKPEE------DKKDGKE-----PSDKPQ---KAVQDHKEPSDKPQK 54
AK EP A +KP E +KKD KE P +KP+ KA +D K S +P K
Sbjct: 929 AKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSK 988
Query: 55 AVQPKHE 61
K E
Sbjct: 989 PKAEKAE 995
Score = 30.4 bits (67), Expect = 1.5
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 4 KAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPS----DKPQKAVQDHKEPSDKPQKAVQPK 59
K K KPE P E+DK KEPS +K +K+ ++ S P+KA + K
Sbjct: 958 KEEKAKKPEEKPKTEAKAK--EDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDK 1015
Query: 60 HEVG 63
G
Sbjct: 1016 AAKG 1019
Score = 30.0 bits (66), Expect = 2.0
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 6 AKGAKPEPAPAPPPPGAKPEED-----KKDGKEPSDKPQKAVQDHKEPSD--KPQKAVQP 58
A+G + E P A PE++ K++ K P++ ++ K P++ P+KA P
Sbjct: 494 AEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSP 553
Query: 59 KHE 61
E
Sbjct: 554 AKE 556
Score = 29.3 bits (64), Expect = 3.3
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 2 APKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDK-PQKAVQDHKEPSDKPQKAVQPKH 60
+P+ AK + P AK K++ + P+DK P+KA KE P+KA P
Sbjct: 746 SPEKAKSPEKAKTLDVKSPEAKTPA-KEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLK 804
Query: 61 E 61
E
Sbjct: 805 E 805
Score = 28.9 bits (63), Expect = 4.3
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 208 AKKHMLVPPPGKEKGPQQGKGPEPAKPPEPGKPPGPAKGK 247
AK+ PP K ++ K P K PE K P + K
Sbjct: 554 AKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAK 593
Score = 27.7 bits (60), Expect = 9.7
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 206 KKAKKHMLVPPPGKEKGP--QQGKGPEPAKPPEPGKPPGPAKGK 247
++AK V P K K P ++ K P AK PE K P + K
Sbjct: 570 EEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAK 613
>gi|150378549 tangerin [Homo sapiens]
Length = 1523
Score = 38.9 bits (89), Expect = 0.004
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 1 MAPKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKP 38
M AA+G P+P+PAP PP A + G PS++P
Sbjct: 1306 MGAAAAEGQAPDPSPAPGPPTAADSQQPPGGSSPSEEP 1343
>gi|168229174 RNA binding motif protein 27 [Homo sapiens]
Length = 1060
Score = 37.7 bits (86), Expect = 0.009
Identities = 16/32 (50%), Positives = 16/32 (50%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGPAKG 246
PPPG P G GP P P PG PGP G
Sbjct: 327 PPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPG 358
Score = 31.2 bits (69), Expect = 0.88
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 212 MLVPP-PGKEKGPQQGKGPEPAKPPEPG 238
ML+PP PG GP G GP P P PG
Sbjct: 331 MLMPPMPGPGPGPGPGPGPGPGPGPGPG 358
Score = 30.4 bits (67), Expect = 1.5
Identities = 14/32 (43%), Positives = 14/32 (43%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGPAKG 246
PPPG P G P P PG PGP G
Sbjct: 319 PPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPG 350
>gi|4505353 heparan glucosaminyl N-deacetylase/N-sulfotransferase 2
[Homo sapiens]
Length = 883
Score = 37.4 bits (85), Expect = 0.012
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 168 VRSRRSMNLHYLLAVILIGAAGVFAFIDVCLQRNHFRGKKAKKHMLVPPPGKEKGPQQGK 227
VR R + LH L+ +++ + G F+ + + KAK+ + +P G
Sbjct: 8 VRPARQLELHRLILLLIAFSLGSMGFLAYYVSTS----PKAKEPLPLPLGDCSSGG--AA 61
Query: 228 GPEPAKPPEPGKPPGP 243
GP PA+PP P +PP P
Sbjct: 62 GPGPARPPVPPRPPRP 77
>gi|224493919 zinc finger and SCAN domain containing 18 isoform 2
[Homo sapiens]
Length = 374
Score = 36.6 bits (83), Expect = 0.021
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 3 PKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDK-PQKAVQDHKEPSDKPQKAVQPKHE 61
P+ A P A A PP G EE+++ GK P + PQ A D S + QP +
Sbjct: 166 PELPTEAPPGDALADPPSGTTEEEEEQPGKAPDPQDPQDAESDSATGSQRQSVIQQPAPD 225
Query: 62 VGTRR 66
GT +
Sbjct: 226 RGTAK 230
>gi|224493912 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 36.6 bits (83), Expect = 0.021
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 3 PKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDK-PQKAVQDHKEPSDKPQKAVQPKHE 61
P+ A P A A PP G EE+++ GK P + PQ A D S + QP +
Sbjct: 302 PELPTEAPPGDALADPPSGTTEEEEEQPGKAPDPQDPQDAESDSATGSQRQSVIQQPAPD 361
Query: 62 VGTRR 66
GT +
Sbjct: 362 RGTAK 366
>gi|226371704 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 36.6 bits (83), Expect = 0.021
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 3 PKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDK-PQKAVQDHKEPSDKPQKAVQPKHE 61
P+ A P A A PP G EE+++ GK P + PQ A D S + QP +
Sbjct: 302 PELPTEAPPGDALADPPSGTTEEEEEQPGKAPDPQDPQDAESDSATGSQRQSVIQQPAPD 361
Query: 62 VGTRR 66
GT +
Sbjct: 362 RGTAK 366
>gi|224493905 zinc finger and SCAN domain containing 18 isoform 1
[Homo sapiens]
Length = 566
Score = 36.6 bits (83), Expect = 0.021
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 3 PKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDK-PQKAVQDHKEPSDKPQKAVQPKHE 61
P+ A P A A PP G EE+++ GK P + PQ A D S + QP +
Sbjct: 358 PELPTEAPPGDALADPPSGTTEEEEEQPGKAPDPQDPQDAESDSATGSQRQSVIQQPAPD 417
Query: 62 VGTRR 66
GT +
Sbjct: 418 RGTAK 422
>gi|119120918 coiled-coil domain containing 64 [Homo sapiens]
Length = 573
Score = 36.6 bits (83), Expect = 0.021
Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 17/96 (17%)
Query: 3 PKAAKGAKPEPAPAPPPPGAKPE------EDKKD-------GK----EPSDKPQKAVQDH 45
P+A G+ E A PPP PE + +KD GK D ++ Q H
Sbjct: 76 PQAEPGSLAEGAGPQPPPSQDPELLSVIRQKEKDLVLAARLGKALLERNQDMSRQYEQMH 135
Query: 46 KEPSDKPQKAVQPKHEVGTRRGCRRYRWELKDSNKE 81
KE +DK + Q KHE+ R R WE + S E
Sbjct: 136 KELTDKLEHLEQEKHELRRRFENREGEWEGRVSELE 171
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 36.2 bits (82), Expect = 0.027
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 3 PKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPS-DKPQKAVQDHKEPSDKPQKAVQPKHE 61
PK A K P PP P + P E ++ +E + ++P V + EP+ PQ V PK
Sbjct: 10641 PKVAVPEKKVPEAIPPKPESPPPEVFEEPEEVALEEPPAEVVEEPEPAAPPQVTVPPKKP 10700
Query: 62 VGTRR 66
V ++
Sbjct: 10701 VPEKK 10705
Score = 30.4 bits (67), Expect = 1.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 3 PKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKHEV 62
PK K P PAP A P K P + P+K + + K+P+ P+K P +V
Sbjct: 10036 PKKPVPEKKVPVPAPKKVEAPP------AKVP-EVPKKLIPEEKKPTPVPKKVEAPPPKV 10088
Query: 63 GTRR 66
+R
Sbjct: 10089 PKKR 10092
Score = 30.4 bits (67), Expect = 1.5
Identities = 19/60 (31%), Positives = 25/60 (41%)
Query: 3 PKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKHEV 62
PKAA K P PP P + P E + KE + + K+P P K + EV
Sbjct: 10557 PKAAVPEKKVPEAIPPKPESPPPEVPEAPKEVVPEKKVPAAPPKKPEVTPVKVPEAPKEV 10616
Score = 29.3 bits (64), Expect = 3.3
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Query: 2 APKAAKGAKPEPAPAPP----PPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQ 57
APK K PAP P PP PEE KK E P+ + P+ ++ +Q
Sbjct: 9583 APKKIVPEKKVPAPVPKKEKVPPPKVPEEPKKPVPEKKVPPKVIKMEEPLPAKVTERHMQ 9642
Query: 58 PKHE 61
E
Sbjct: 9643 ITQE 9646
Score = 29.3 bits (64), Expect = 3.3
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 4 KAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKHEVG 63
K + K +P P PPPP E+ K+ + P+K V + + +K + + P G
Sbjct: 10870 KVIEKPKLKPRPPPPPPAPPKEDVKEKIFQLKAIPKKKVPEKPQVPEKVE--LTPLKVPG 10927
Query: 64 TRRGCRRYRWELKDSNKE 81
+ R+ E K KE
Sbjct: 10928 GEKKVRKLLPERKPEPKE 10945
Score = 28.5 bits (62), Expect = 5.7
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
Query: 2 APKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKHE 61
APK K P P P P P K P + P+ AV + K P P K P E
Sbjct: 10528 APKEVVPEKKVPVPPPKKPEVPPT------KVP-EVPKAAVPEKKVPEAIPPKPESPPPE 10580
Query: 62 V 62
V
Sbjct: 10581 V 10581
Score = 28.1 bits (61), Expect = 7.4
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
Query: 2 APKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKHE 61
APK K P P P P P K P + P+ AV + K P P K P E
Sbjct: 10612 APKEVVPEKKVPVPPPKKPEVPPT------KVP-EVPKVAVPEKKVPEAIPPKPESPPPE 10664
Query: 62 V 62
V
Sbjct: 10665 V 10665
>gi|108773787 retinoblastoma 1 [Homo sapiens]
Length = 928
Score = 36.2 bits (82), Expect = 0.027
Identities = 44/137 (32%), Positives = 58/137 (42%), Gaps = 18/137 (13%)
Query: 2 APKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKP------QKA 55
A AA A PAP PPP PEED + P D P V+ E +++P QK
Sbjct: 10 AATAAAAAAEPPAPPPPP---PPEEDPEQDSGPEDLP--LVRLEFEETEEPDFTALCQKL 64
Query: 56 VQPKHEVGTRRGCRRYRWELKDSNKEFWLLGHAEIKIRSLG-CLIAAMILLSSLTVHPIL 114
P H R WE K S+ + L G+ + K G C+ A + L ++
Sbjct: 65 KIPDHV----RERAWLTWE-KVSSVDGVLGGYIQKKKELWGICIFIAAVDLDEMS-FTFT 118
Query: 115 RLIITMEISFFSFFILL 131
L +EIS FF LL
Sbjct: 119 ELQKNIEISVHKFFNLL 135
>gi|4826908 phosphoinositide-3-kinase, regulatory subunit 2 (beta)
[Homo sapiens]
Length = 728
Score = 35.8 bits (81), Expect = 0.036
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 16 APPPPGAKPEEDKKDGKEPS-DKP----QKAVQDHKEPSDKPQKAVQPK 59
APPPP + P DG EPS D P +K +Q+H E + A+ PK
Sbjct: 257 APPPPSSPPPGGAPDGSEPSPDFPALLVEKLLQEHLEEQEVAPPALPPK 305
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 35.8 bits (81), Expect = 0.036
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 4 KAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKHE 61
K K K +P PP E+ K K+P +KP KA K+P +KP KA + E
Sbjct: 101 KGPKVPKESLEGSPRPPKKGKEKPPKATKKPKEKPPKAT---KKPKEKPPKATKKPKE 155
Score = 35.8 bits (81), Expect = 0.036
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 2 APKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQ 57
+P+ K K +P A P KP K K+P +KP KA K+P +KP KA +
Sbjct: 113 SPRPPKKGKEKPPKATKKPKEKPP---KATKKPKEKPPKAT---KKPKEKPPKATK 162
Score = 33.5 bits (75), Expect = 0.18
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 3 PKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQP 58
PKA K K +P A P KP K K+P +KP KA + K PS K + P
Sbjct: 125 PKATKKPKEKPPKATKKPKEKP---PKATKKPKEKPPKATK--KPPSGKRPPILAP 175
Score = 29.3 bits (64), Expect = 3.3
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 4 KAAKGAKP--EPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKHE 61
KA G KP P A P K ++ K GK+ DK K ++ E S +P K + K
Sbjct: 68 KAQAGGKPGKRPGTAAEVPPEKTKDKGKKGKK--DKGPKVPKESLEGSPRPPKKGKEKPP 125
Query: 62 VGTRR 66
T++
Sbjct: 126 KATKK 130
Score = 28.5 bits (62), Expect = 5.7
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 18 PPPGAKPEEDKK--DGKEPSDKPQKAVQDHKEPSDK 51
PPP KP+ +++ + KE KP+K KE +DK
Sbjct: 320 PPPPQKPDAERQTDEEKEELKKPKKEDSSPKEETDK 355
>gi|116734689 socius isoform 3 [Homo sapiens]
Length = 400
Score = 35.8 bits (81), Expect = 0.036
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 204 RGKKAKKHMLVPPPGKEKGPQQGKGPEPAKPPEPGKPPGPA 244
R ++A K L PG GP G P P P PG PGP+
Sbjct: 350 RARRAPKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPS 390
Score = 30.0 bits (66), Expect = 2.0
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
P PG GP G GP P+ P PG P P
Sbjct: 373 PSPGPGPGPSPGPGPGPS--PCPGPSPSP 399
Score = 28.9 bits (63), Expect = 4.3
Identities = 12/30 (40%), Positives = 13/30 (43%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGPA 244
P PG GP G P P P P P P+
Sbjct: 369 PGPGPSPGPGPGPSPGPGPGPSPCPGPSPS 398
>gi|116734681 socius isoform 1 [Homo sapiens]
Length = 487
Score = 35.8 bits (81), Expect = 0.036
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 204 RGKKAKKHMLVPPPGKEKGPQQGKGPEPAKPPEPGKPPGPA 244
R ++A K L PG GP G P P P PG PGP+
Sbjct: 437 RARRAPKSSLKFSPGPCPGPGPGPSPGPGPGPSPGPGPGPS 477
Score = 30.0 bits (66), Expect = 2.0
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGP 243
P PG GP G GP P+ P PG P P
Sbjct: 460 PSPGPGPGPSPGPGPGPS--PCPGPSPSP 486
Score = 28.9 bits (63), Expect = 4.3
Identities = 12/30 (40%), Positives = 13/30 (43%)
Query: 215 PPPGKEKGPQQGKGPEPAKPPEPGKPPGPA 244
P PG GP G P P P P P P+
Sbjct: 456 PGPGPSPGPGPGPSPGPGPGPSPCPGPSPS 485
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.140 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,117,327
Number of Sequences: 37866
Number of extensions: 784679
Number of successful extensions: 17805
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 309
Number of HSP's that attempted gapping in prelim test: 12263
Number of HSP's gapped (non-prelim): 5227
length of query: 248
length of database: 18,247,518
effective HSP length: 100
effective length of query: 148
effective length of database: 14,460,918
effective search space: 2140215864
effective search space used: 2140215864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.