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Search of human proteins with 21361875
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361875 LTV1 homolog [Homo sapiens]
(475 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361875 LTV1 homolog [Homo sapiens] 952 0.0
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 47 4e-05
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 47 4e-05
gi|122937227 U2-associated SR140 protein [Homo sapiens] 46 6e-05
gi|31982906 cingulin-like 1 [Homo sapiens] 45 1e-04
gi|148746195 trichohyalin [Homo sapiens] 43 5e-04
gi|116235478 establishment of cohesion 1 homolog 1 [Homo sapiens] 43 7e-04
gi|209862789 microtubule associated monoxygenase, calponin and L... 42 0.001
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 41 0.002
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens] 41 0.002
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 41 0.003
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 41 0.003
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 40 0.005
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 40 0.005
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 40 0.005
gi|31317305 M-phase phosphoprotein 10 [Homo sapiens] 40 0.006
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 40 0.006
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 40 0.006
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 40 0.006
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 39 0.008
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 39 0.008
gi|145580615 KRI1 homolog [Homo sapiens] 39 0.008
gi|210147567 hypothetical protein LOC220081 [Homo sapiens] 39 0.008
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 39 0.010
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear... 39 0.010
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 39 0.010
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 39 0.010
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 39 0.010
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 39 0.010
gi|83700233 eukaryotic translation initiation factor 3, subunit ... 39 0.010
>gi|21361875 LTV1 homolog [Homo sapiens]
Length = 475
Score = 952 bits (2462), Expect = 0.0
Identities = 475/475 (100%), Positives = 475/475 (100%)
Query: 1 MPHRKKKPFIEKKKAVSFHLVHRSQRDPLAADESAPQRVLLPTQKIDNEERRAEQRKYGV 60
MPHRKKKPFIEKKKAVSFHLVHRSQRDPLAADESAPQRVLLPTQKIDNEERRAEQRKYGV
Sbjct: 1 MPHRKKKPFIEKKKAVSFHLVHRSQRDPLAADESAPQRVLLPTQKIDNEERRAEQRKYGV 60
Query: 61 FFDDDYDYLQHLKEPSGPSELIPSSTFSAHNRREEKEETLVIPSTGIKLPSSVFASEFEE 120
FFDDDYDYLQHLKEPSGPSELIPSSTFSAHNRREEKEETLVIPSTGIKLPSSVFASEFEE
Sbjct: 61 FFDDDYDYLQHLKEPSGPSELIPSSTFSAHNRREEKEETLVIPSTGIKLPSSVFASEFEE 120
Query: 121 DVGLLNKAAPVSGPRLDFDPDIVAALDDDFDFDDPDNLLEDDFILQANKATGEEEGMDIQ 180
DVGLLNKAAPVSGPRLDFDPDIVAALDDDFDFDDPDNLLEDDFILQANKATGEEEGMDIQ
Sbjct: 121 DVGLLNKAAPVSGPRLDFDPDIVAALDDDFDFDDPDNLLEDDFILQANKATGEEEGMDIQ 180
Query: 181 KSENEDDSEWEDVDDEKGDSNDDYDSAGLLSDEDCMSVPGKTHRAIADHLFWSEETKSRF 240
KSENEDDSEWEDVDDEKGDSNDDYDSAGLLSDEDCMSVPGKTHRAIADHLFWSEETKSRF
Sbjct: 181 KSENEDDSEWEDVDDEKGDSNDDYDSAGLLSDEDCMSVPGKTHRAIADHLFWSEETKSRF 240
Query: 241 TEYSMTSSVMRRNEQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNRLQEVLND 300
TEYSMTSSVMRRNEQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNRLQEVLND
Sbjct: 241 TEYSMTSSVMRRNEQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNRLQEVLND 300
Query: 301 YYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEKWDCESICSTYSNL 360
YYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEKWDCESICSTYSNL
Sbjct: 301 YYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEKWDCESICSTYSNL 360
Query: 361 YNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKGLTAKQTERIQMINGSDLPKVSTQPRSK 420
YNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKGLTAKQTERIQMINGSDLPKVSTQPRSK
Sbjct: 361 YNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKGLTAKQTERIQMINGSDLPKVSTQPRSK 420
Query: 421 NESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELLNLKKNVEGLKL 475
NESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELLNLKKNVEGLKL
Sbjct: 421 NESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELLNLKKNVEGLKL 475
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 47.0 bits (110), Expect = 4e-05
Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 20/218 (9%)
Query: 142 IVAALDDDFDFDDPDNLLEDDFILQANKA--------TGEEEGMDIQKSENEDDSEWEDV 193
+ +DDD D +DP+N + +L+ KA + ++E + +K + + E
Sbjct: 1216 VPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEENPGD 1275
Query: 194 DDEKGDSNDDYDSAGLLSDEDCMSVPGKTHRAIADHLFWS-----EETKSRFTEYSMTSS 248
++ K N + DS D + P HR + L S EE K++ E+
Sbjct: 1276 EEAKNQVNSESDS-----DSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKG 1330
Query: 249 VMRRNEQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNRLQEVLNDYYKEKAEN 308
RR +++ D F E +E+ ++ + + L+E Y ++K
Sbjct: 1331 RNRR--KVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRR 1388
Query: 309 CVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKE 346
+K+ E++ E +E EEEE EE +E
Sbjct: 1389 RIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEE 1426
Score = 31.6 bits (70), Expect = 1.6
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 168 NKATGEEEGMDIQKSENEDDSEWEDVDDEKGDSNDDYDSAG 208
NK+ EEE ++ + E++ E E+ ++E+ D NDD S G
Sbjct: 1400 NKSNSEEE----EEEKEEEEEEEEEEEEEEEDENDDSKSPG 1436
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 47.0 bits (110), Expect = 4e-05
Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 20/218 (9%)
Query: 142 IVAALDDDFDFDDPDNLLEDDFILQANKA--------TGEEEGMDIQKSENEDDSEWEDV 193
+ +DDD D +DP+N + +L+ KA + ++E + +K + + E
Sbjct: 1254 VPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEENPGD 1313
Query: 194 DDEKGDSNDDYDSAGLLSDEDCMSVPGKTHRAIADHLFWS-----EETKSRFTEYSMTSS 248
++ K N + DS D + P HR + L S EE K++ E+
Sbjct: 1314 EEAKNQVNSESDS-----DSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKG 1368
Query: 249 VMRRNEQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNRLQEVLNDYYKEKAEN 308
RR +++ D F E +E+ ++ + + L+E Y ++K
Sbjct: 1369 RNRR--KVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRR 1426
Query: 309 CVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKE 346
+K+ E++ E +E EEEE EE +E
Sbjct: 1427 RIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEE 1464
Score = 31.6 bits (70), Expect = 1.6
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 168 NKATGEEEGMDIQKSENEDDSEWEDVDDEKGDSNDDYDSAG 208
NK+ EEE ++ + E++ E E+ ++E+ D NDD S G
Sbjct: 1438 NKSNSEEE----EEEKEEEEEEEEEEEEEEEDENDDSKSPG 1474
>gi|122937227 U2-associated SR140 protein [Homo sapiens]
Length = 1029
Score = 46.2 bits (108), Expect = 6e-05
Identities = 72/365 (19%), Positives = 154/365 (42%), Gaps = 35/365 (9%)
Query: 95 EKEETLVIPST--GIKLPSSVFASEFEEDVGLLNKAAPVSGPRLDFDPDIVAALDDDFD- 151
E++ET +P G + + + E+ G+ A P+ D D + +LDDD D
Sbjct: 683 EEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPID----DLDGVPIKSLDDDLDG 738
Query: 152 --FDDPDNLLEDDFILQANKATGEEEGMDIQKSENEDDSEWEDVD-----DEKGDSNDDY 204
D ++ +++ I + + E +++ S+WE D +E+ + N +
Sbjct: 739 VPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEENQNQEE 798
Query: 205 DSAGLLSDEDCMSVPGKTHRAIADHLFWSEETKSRFTEYSMTSSVMRRNEQLTLHDERFE 264
+S +ED S + H ++ + E T+S+F++YS S R +L + +
Sbjct: 799 ESE---DEEDTQSSKSEEHHLYSNPIK-EEMTESKFSKYSEMSEEKRA--KLREIELKVM 852
Query: 265 KFYEQYDDDEIGALDNAELEGSIQVDSNRLQEVLNDYYKEKAENCVKLNTLEPLEDQDLP 324
KF ++ + + + ++ ++L + +EK + + + + + L
Sbjct: 853 KFQDELESGKRPKKPGQSFQEQVEHYRDKLLQ------REKEKELERERERDKKDKEKLE 906
Query: 325 MNELDESEEEEMITVVLEEAKEKWDCESICSTYSNLYN----HPQLIKYQPKPKQIRISS 380
D+ E++E T +E K + S S+ P+ + + + + SS
Sbjct: 907 SRSKDKKEKDEC-TPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERSHKESS 965
Query: 381 KTGIPLNVLPKKGLTAKQTERIQMINGSDLPKVSTQPRSKNESKEDKRARKQAIKEERKE 440
++ P+ +K+ +R +GS PK S + RS++ K K++R Q+ R
Sbjct: 966 RSRSSHKDSPRD--VSKKAKRSP--SGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSH 1021
Query: 441 RRVEK 445
++ +K
Sbjct: 1022 KKSKK 1026
Score = 31.2 bits (69), Expect = 2.1
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 329 DESEEEEMITVVLEEAKEKWDCESICSTYSNLYNHP--QLIKYQPKPKQIRISSKTGIPL 386
+ESEEEE EE++++ D +S S +LY++P + + K +S + L
Sbjct: 786 EESEEEENQNQE-EESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEKRAKL 844
Query: 387 NVLPKKGLTAKQTERIQMINGSDLPKVSTQPRSKNESKEDKRARKQAIKEERKERRVEKK 446
+ K + + ++ +G K + + E DK +++ KE +ER +KK
Sbjct: 845 REIELKVMKFQD----ELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKK 900
Query: 447 ANKLAFKLEKRRQEKE 462
+ KLE R ++K+
Sbjct: 901 DKE---KLESRSKDKK 913
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 45.4 bits (106), Expect = 1e-04
Identities = 59/294 (20%), Positives = 129/294 (43%), Gaps = 21/294 (7%)
Query: 174 EEGMDIQKSENEDDSEWEDVDDEKGDSNDDYDSAGLLSDEDCMSVPGKTHRA---IADHL 230
EE ++ + +E D+ D+ + +D+ DSA D + ++ + +A + D L
Sbjct: 684 EELFQVKMEREQHQTEIRDLQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLL 743
Query: 231 FWSEETKS--RFTEYSMTSSVMRRNEQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQ 288
EE + R E +T+ E+++ HD+ +K EQY D E+ AL + E +
Sbjct: 744 IAKEEQEDLLRKRERELTALKGALKEEVSSHDQEMDKLKEQY-DAELQALRESVEEATKN 802
Query: 289 VDSNRLQEVLNDYYKEKAENCVKL--NTLEPLEDQDLPMNELDESEEEEMITVVLEEAKE 346
V+ + ++ + E VKL E L+ + + + ++ + +EAK
Sbjct: 803 VEVLASRSNTSEQDQAGTEMRVKLLQEENEKLQGRSEELERRVAQLQRQIEDLKGDEAKA 862
Query: 347 KWDCESICSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKGLTAKQTERIQMIN 406
K E++ + + + + K ++ +S++ + + +G ++ T+
Sbjct: 863 K---ETLKKYEGEIRQLEEALVHARKEEKEAVSARRALENELEAAQGNLSQTTQ------ 913
Query: 407 GSDLPKVSTQPRSKNESKEDKRARKQAIKEERKE--RRVEKKANKLAFKLEKRR 458
+ ++S + + ++E KE R K ++ ER + +EK ++A +E R
Sbjct: 914 --EQKQLSEKLKEESEQKEQLRRLKNEMENERWHLGKTIEKLQKEMADIVEASR 965
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 43.1 bits (100), Expect = 5e-04
Identities = 61/313 (19%), Positives = 123/313 (39%), Gaps = 34/313 (10%)
Query: 181 KSENEDDSEWEDVDDEKGDSNDDYDSAGLLSDEDCMSVPGK-------THRAIADHLFWS 233
+ E +E E + KG +++ L + + + K R D +F
Sbjct: 181 QEREERRAEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQE 240
Query: 234 EETKSRFTEYSMTSSVMRRNEQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNR 293
EE K E+ +V+R+ E+ +E + Q +++++ L+ EL Q + +
Sbjct: 241 EEEK----EWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQ 296
Query: 294 LQ-------------EVLNDYYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVV 340
Q E + +E+ E + E +Q L E +E E+++
Sbjct: 297 QQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQL-RREQEERREQQLRREQ 355
Query: 341 LEEAKEKWDCESICSTYSNLYNHPQLIKYQP--KPKQIRISSKTGIPLNVLPKKGLTAKQ 398
EE +E + + QL + Q + +Q+R + + ++ L +Q
Sbjct: 356 EEERRE----QQLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQ 411
Query: 399 TERIQMINGSDLPKVSTQPRSKNESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRR 458
R + + Q ++E K ++ R+Q +K E++ERR K + + E+
Sbjct: 412 QLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREE---ETERHE 468
Query: 459 QEKELLNLKKNVE 471
QE+ LK++ E
Sbjct: 469 QERRKQQLKRDQE 481
Score = 35.4 bits (80), Expect = 0.11
Identities = 45/229 (19%), Positives = 91/229 (39%), Gaps = 45/229 (19%)
Query: 250 MRRNEQLTLH--DERFEKFYEQY--------DDDEIGALDNAELEGSIQVDSNRLQEVLN 299
+RR +QL +ER E+ +EQ + +E E E R Q++
Sbjct: 419 LRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQLKR 478
Query: 300 DYYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEKWDCESICSTYSN 359
D +E+ E +KL E E Q+ +L +EE
Sbjct: 479 DQEEERRERWLKLEEEERREQQERREQQLRREQEER------------------------ 514
Query: 360 LYNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKGLTAKQTERIQMINGSDLPKVSTQPRS 419
Q +K Q + ++++ ++ ++ L +Q ER + + + K Q R
Sbjct: 515 ---REQRLKRQEEEERLQQRLRS--------EQQLRREQEERREQLLKREEEKRLEQERR 563
Query: 420 KNESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELLNLKK 468
+ K ++ R+ + + +ERR ++ + +LE+R + +E+ L++
Sbjct: 564 EQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQ 612
Score = 34.3 bits (77), Expect = 0.25
Identities = 47/228 (20%), Positives = 101/228 (44%), Gaps = 33/228 (14%)
Query: 251 RRNEQLTL--HDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNRLQEVLNDYYKEKAEN 308
RR +QL +ER E++ + +++ + E + + + R Q + +E+ +
Sbjct: 471 RRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQ 530
Query: 309 CVKLNTLEPLE-DQDLPMNELDESEEEEMITVVLEEAKEKWDCESICSTYSNLYNHPQLI 367
+L + + L +Q+ +L + EEE+ + E + K + E QL+
Sbjct: 531 --RLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEE---------RRDQLL 579
Query: 368 KYQPKPKQIRISSKTGIPLNVLPKKGLTAKQTERIQMINGSDLPKVSTQPRSKNESKEDK 427
K + + +Q R+ + L ++ L ++ ER++ + + R K E E++
Sbjct: 580 KREEERRQQRLKREQEERL----EQRLKREEVERLEQ-------EERREQRLKREEPEEE 628
Query: 428 RARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELLNLKKNVEGLKL 475
R ++ EE++ERR + +L + +QE+ LK+ E +L
Sbjct: 629 RRQQLLKSEEQEERRQQ--------QLRREQQERREQRLKREEEEERL 668
Score = 31.6 bits (70), Expect = 1.6
Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 397 KQTERIQMINGSDLPKVSTQPRSKN--ESKEDKRARKQAIKEERKERRVEKKANKLAFKL 454
K ++ + + G + K Q R K E +E ++ +Q ++EER++RR ++ + K
Sbjct: 965 KLQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKD 1024
Query: 455 EKRRQEKELLNLKKNVEGLK 474
E +++E++LL ++ L+
Sbjct: 1025 ELQQEEEQLLREEREKRRLQ 1044
Score = 31.2 bits (69), Expect = 2.1
Identities = 43/220 (19%), Positives = 93/220 (42%), Gaps = 19/220 (8%)
Query: 251 RRNEQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNRLQEVLNDYYK--EKAEN 308
R EQ ER KF ++ L ELE + + QE + + E+
Sbjct: 1694 REEEQQLRRQERERKFLQEEQQ-----LRRQELERKFREEEQLRQETEQEQLRRQERYRK 1748
Query: 309 CVKLNTLEP-LEDQDLPMNELDESEEEEMITVVLEEAKEKWDCESICSTYSNL-YNHPQL 366
++ L P E+Q L E D EE E+ +++ + + + S S+ + +
Sbjct: 1749 ILEEEQLRPEREEQQLRRQERDRKFREE------EQLRQEREEQQLRSQESDRKFREEEQ 1802
Query: 367 IKYQPKPKQIRISSKTGIPLNVLPKKGLTAKQTERIQMINGSDL---PKVSTQPRSKNES 423
++ + + +Q+R + G ++ +Q +R++ + +TQ +S+ E
Sbjct: 1803 LRQEREEQQLRPQQRDG-KYRWEEEQLQLEEQEQRLRQERDRQYRAEEQFATQEKSRREE 1861
Query: 424 KEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKEL 463
+E + +Q ++ER+ + E+ + + ++ RQ E+
Sbjct: 1862 QELWQEEEQKRRQERERKLREEHIRRQQKEEQRHRQVGEI 1901
Score = 30.8 bits (68), Expect = 2.8
Identities = 40/236 (16%), Positives = 96/236 (40%), Gaps = 41/236 (17%)
Query: 232 WSEETKSRFTEYSMTSSVM---RRNEQLTLHD--ERFEKFYEQYDDDEIGALDNAELEGS 286
W E KS +++ +R QL + +R ++F + ++ E E E
Sbjct: 771 WQAEEKSERGRQRLSARPPLREQRERQLRAEERQQREQRFLPEEEEKEQRRRQRREREKE 830
Query: 287 IQVDSNRLQEVLNDYYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKE 346
+Q + E+ E + + L++++ + L E +E + K
Sbjct: 831 LQ-------------FLEEEEQLQRRERAQQLQEEE---DGLQEDQERRRSQEQRRDQKW 874
Query: 347 KWDCESICSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKGLTAKQTERIQMIN 406
+W E + K ++ + +K + + ++ L ++ E +Q
Sbjct: 875 RWQLEE-----------------ERKRRRHTLYAKPALQEQLRKEQQLLQEEEEELQR-E 916
Query: 407 GSDLPKVSTQPRSKNESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKE 462
+ + Q R E ++ ++ +Q ++EER++RR +++ + ++ +K+ Q+KE
Sbjct: 917 EREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQ--YRKDKKLQQKE 970
Score = 30.4 bits (67), Expect = 3.7
Identities = 39/215 (18%), Positives = 85/215 (39%), Gaps = 40/215 (18%)
Query: 251 RRNEQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNRLQEVLNDYYKEKAENCV 310
R EQ ER KF E+ + E E + +L++ + ++E+ +
Sbjct: 1417 REEEQQLSRQERDRKFREEEQQ-----VRRQERERKFLEEEQQLRQERHRKFREEEQ--- 1468
Query: 311 KLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEKWDCESICSTYSNLYNHPQLIKYQ 370
L+ E+Q L E D EE + +E K + +L +
Sbjct: 1469 ---LLQEREEQQLHRQERDRKFLEEEQQLRRQERDRK-------------FREQELRSQE 1512
Query: 371 PKPKQIRISSKTGIPLNVLPKKGLTAKQTERIQMINGSDLPKVSTQPRSKNESKEDKRAR 430
P+ K L ++ +Q + + + + + + + + ++ K
Sbjct: 1513 PERK-------------FLEEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFRE 1559
Query: 431 KQAIKEERKERRVEKKANKLAFKLEK---RRQEKE 462
++ +++ER+E+++ ++ F+LE+ RRQE+E
Sbjct: 1560 EEQLRQEREEQQLSRQERDRKFRLEEQKVRRQEQE 1594
Score = 30.0 bits (66), Expect = 4.8
Identities = 14/49 (28%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
Query: 416 QPRSKNESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELL 464
Q R K+E ++++ +Q ++EER++RR++++ + + E +++E++LL
Sbjct: 1019 QYRKKDELQQEE---EQLLREEREKRRLQERERQYREEEELQQEEEQLL 1064
>gi|116235478 establishment of cohesion 1 homolog 1 [Homo sapiens]
Length = 840
Score = 42.7 bits (99), Expect = 7e-04
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 47/271 (17%)
Query: 234 EETKSRFTEYSMTSSVMRRNEQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNR 293
E TK + ++ + + NEQL +R ++ E +L + E++G +Q
Sbjct: 96 ESTKKKLSQKKLVHENPKANEQLNRRSQRLQQLTEV----SRRSLRSREIQGQVQAVKQS 151
Query: 294 LQEVLNDYYK-------EKAENCVKLNTLE----PLEDQDLPMNELDESEEEEMITVVLE 342
L + + ++ VK LE ED++L +NE+ S + + V
Sbjct: 152 LPPTKKEQCSSTQSKSNKTSQKHVKRKVLEVKSDSKEDENLVINEVINSPKGKKRKV--- 208
Query: 343 EAKEKWDCESICSTYSNLYNHPQLIKYQPKPKQIRISS---KTGIPLNVLPKKGLTAKQT 399
E + C S C+ S PQ + + K + ++S ++ + +V+PKK K++
Sbjct: 209 EHQTACACSSQCTQGSE--KCPQKTTRRDETKPVPVTSEVKRSKMATSVVPKKN-EMKKS 265
Query: 400 ERIQMINGSDLPKVSTQP----RSKNESKEDKRARKQAI------------------KEE 437
Q+ + LPK S QP +S NE ++ ++++ +I K+E
Sbjct: 266 VHTQVNTNTTLPK-SPQPSVPEQSDNELEQAGKSKRGSILQLCEEIAGEIESDNVEVKKE 324
Query: 438 RKERRVEKKANKLAFKLEKRRQEKELLNLKK 468
+ K+ KLE+ E+++L+ K+
Sbjct: 325 SSQMESVKEEKPTEIKLEETSVERQILHQKE 355
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 42.0 bits (97), Expect = 0.001
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 48 NEERRAEQRKYGVFFDDDYD------------YLQHLKEPSGPSELIPSSTFSAHNRREE 95
NEE E+ +Y ++DYD LQ + + P E I + H R E
Sbjct: 991 NEEEEEEEEEYEEEEEEDYDEEEEESSEAGNQRLQQVMHAADPLE-IQADVHWTHIRERE 1049
Query: 96 KEETLVIPSTGIKLPSSVFASEFEEDVGLLNKAAPVSGPRL-DFDP-DIVAALDDDFDFD 153
+EE + S + + ++ EEDV ++ A + G D DP D A LDDD +
Sbjct: 1050 EEERMAPASESSASGAPLDENDLEEDVD--SEPAEIEGEAAEDGDPGDTGAELDDDQHWS 1107
Query: 154 DPDNLLEDDFILQANKATGEEEGMDIQKSENEDDSEWEDVDDEKGDS 200
D + + + L A GE E ++++ SE+E+ E+G S
Sbjct: 1108 DSPSDADRELRLPC-PAEGEAE-LELRVSEDEEKLPASPKHQERGPS 1152
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 41.2 bits (95), Expect = 0.002
Identities = 67/323 (20%), Positives = 121/323 (37%), Gaps = 22/323 (6%)
Query: 30 AADESAPQRVLLPTQKIDNEERRAEQRKYGVFFDDDYDYLQHLKEPSGPSELIPSSTFSA 89
A++ + P R ++ + A++ G+ F++ D + K G +S +A
Sbjct: 390 ASERAGPSRARHFSEHPSTSKMNAQETATGMAFEEPIDEKKFEKTEDGGEFEEGASENNA 449
Query: 90 HNRREEKEETLVIPSTGIK--LPSSVF---ASEFEEDVGLLNKAAPVSGPRLDFDPDIVA 144
EKE P + P F S+ E + G + + P+ +
Sbjct: 450 KESSPEKEAEEGCPEKESEEGCPKRGFEGSCSQKESEEGNPVRGSEEDSPKKESKKK--- 506
Query: 145 ALDDDFDFDDPDNLLEDDFILQANKATGEEEGMDIQKSENEDDSEWEDVDDEKGDSNDDY 204
L +D + + EDD ++ + G + + SE E D + + E G S ++
Sbjct: 507 TLKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDG-SEREF 565
Query: 205 DSAGLLSDEDCMSVPGKTHRAIADHLFWSEETKSRFTEYSMTSSVMRRNEQLTLHDERFE 264
+ GL D D + H + D EE S +E+ S + L +E E
Sbjct: 566 EENGLEKDLDEEGSEKELHENVLDKEL--EENDSENSEFEDDGS------EKVLDEEGSE 617
Query: 265 KFYEQYDDDEIGALDNAELEGSIQVDSNRLQEVLNDYYKEKAENCVKLNTLEPLEDQDLP 324
+ +++ D++ D E + D +E Y EK E D+ L
Sbjct: 618 REFDEDSDEKEEEEDTYEKVFDDESDEKEDEE----YADEKGLEAADKKAEEGDADEKL- 672
Query: 325 MNELDESEEEEMITVVLEEAKEK 347
E D+ E+E+ +E+A EK
Sbjct: 673 FEESDDKEDEDADGKEVEDADEK 695
Score = 33.1 bits (74), Expect = 0.57
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 16/113 (14%)
Query: 116 SEFEEDVGLLNKAAPVSGPRLDFDPDIVAALDDDFD----FDDPDNLLEDDFI-----LQ 166
SEFE+D K G +FD D +++ FDD + ED+ L+
Sbjct: 600 SEFEDDGS--EKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLE 657
Query: 167 ANKATGEEEGMDIQKSENEDDSEWEDVDDEKGDSND-----DYDSAGLLSDED 214
A EE D + E DD E ED D ++ + D D DS L DE+
Sbjct: 658 AADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEE 710
>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 41.2 bits (95), Expect = 0.002
Identities = 67/323 (20%), Positives = 121/323 (37%), Gaps = 22/323 (6%)
Query: 30 AADESAPQRVLLPTQKIDNEERRAEQRKYGVFFDDDYDYLQHLKEPSGPSELIPSSTFSA 89
A++ + P R ++ + A++ G+ F++ D + K G +S +A
Sbjct: 390 ASERAGPSRARHFSEHPSTSKMNAQETATGMAFEEPIDEKKFEKTEDGGEFEEGASENNA 449
Query: 90 HNRREEKEETLVIPSTGIK--LPSSVF---ASEFEEDVGLLNKAAPVSGPRLDFDPDIVA 144
EKE P + P F S+ E + G + + P+ +
Sbjct: 450 KESSPEKEAEEGCPEKESEEGCPKRGFEGSCSQKESEEGNPVRGSEEDSPKKESKKK--- 506
Query: 145 ALDDDFDFDDPDNLLEDDFILQANKATGEEEGMDIQKSENEDDSEWEDVDDEKGDSNDDY 204
L +D + + EDD ++ + G + + SE E D + + E G S ++
Sbjct: 507 TLKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDG-SEREF 565
Query: 205 DSAGLLSDEDCMSVPGKTHRAIADHLFWSEETKSRFTEYSMTSSVMRRNEQLTLHDERFE 264
+ GL D D + H + D EE S +E+ S + L +E E
Sbjct: 566 EENGLEKDLDEEGSEKELHENVLDKEL--EENDSENSEFEDDGS------EKVLDEEGSE 617
Query: 265 KFYEQYDDDEIGALDNAELEGSIQVDSNRLQEVLNDYYKEKAENCVKLNTLEPLEDQDLP 324
+ +++ D++ D E + D +E Y EK E D+ L
Sbjct: 618 REFDEDSDEKEEEEDTYEKVFDDESDEKEDEE----YADEKGLEAADKKAEEGDADEKL- 672
Query: 325 MNELDESEEEEMITVVLEEAKEK 347
E D+ E+E+ +E+A EK
Sbjct: 673 FEESDDKEDEDADGKEVEDADEK 695
Score = 33.1 bits (74), Expect = 0.57
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 16/113 (14%)
Query: 116 SEFEEDVGLLNKAAPVSGPRLDFDPDIVAALDDDFD----FDDPDNLLEDDFI-----LQ 166
SEFE+D K G +FD D +++ FDD + ED+ L+
Sbjct: 600 SEFEDDGS--EKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLE 657
Query: 167 ANKATGEEEGMDIQKSENEDDSEWEDVDDEKGDSND-----DYDSAGLLSDED 214
A EE D + E DD E ED D ++ + D D DS L DE+
Sbjct: 658 AADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEE 710
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 40.8 bits (94), Expect = 0.003
Identities = 65/302 (21%), Positives = 122/302 (40%), Gaps = 22/302 (7%)
Query: 173 EEEGMDIQKSENEDDSEWEDVDDEKGDSNDDYDSAGLLSDEDCMSVPGKTHRAIADHLFW 232
E + +Q E+ E V+DEK + + + +++E +S+ + A +
Sbjct: 442 EAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTA---ITEELAVSMKEEKKEAAEEK--- 495
Query: 233 SEETKSRFTEYSMTSSVMRRNEQLTLHDE----RFEKFYEQYDDDEIGALDNAELEGSIQ 288
EE ++ E + S ++ +E E E+ ++DE D AE GS +
Sbjct: 496 EEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEK 555
Query: 289 VDSNRLQEVLNDYYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEKW 348
S+ +E + + +AE + E E++ + + + +EE++ E EK
Sbjct: 556 EGSSEKEEGEQEEGETEAE--AEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKA 613
Query: 349 DCESICSTYSNLYNHP------QLIKYQPKPKQ-IRISSKTGIPLNVLPKKGLTAKQTER 401
S P + P PK + K+ +P + + +KG +
Sbjct: 614 KSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSP 673
Query: 402 IQMINGSDLPKVSTQP-RSKNE--SKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRR 458
++ S +PK + +SK E E K ++ +KE KE +VEKK K EK++
Sbjct: 674 VEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKK 733
Query: 459 QE 460
E
Sbjct: 734 AE 735
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 40.8 bits (94), Expect = 0.003
Identities = 65/302 (21%), Positives = 122/302 (40%), Gaps = 22/302 (7%)
Query: 173 EEEGMDIQKSENEDDSEWEDVDDEKGDSNDDYDSAGLLSDEDCMSVPGKTHRAIADHLFW 232
E + +Q E+ E V+DEK + + + +++E +S+ + A +
Sbjct: 66 EAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTA---ITEELAVSMKEEKKEAAEEK--- 119
Query: 233 SEETKSRFTEYSMTSSVMRRNEQLTLHDE----RFEKFYEQYDDDEIGALDNAELEGSIQ 288
EE ++ E + S ++ +E E E+ ++DE D AE GS +
Sbjct: 120 EEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEK 179
Query: 289 VDSNRLQEVLNDYYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEKW 348
S+ +E + + +AE + E E++ + + + +EE++ E EK
Sbjct: 180 EGSSEKEEGEQEEGETEAE--AEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKA 237
Query: 349 DCESICSTYSNLYNHP------QLIKYQPKPKQ-IRISSKTGIPLNVLPKKGLTAKQTER 401
S P + P PK + K+ +P + + +KG +
Sbjct: 238 KSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSP 297
Query: 402 IQMINGSDLPKVSTQP-RSKNE--SKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRR 458
++ S +PK + +SK E E K ++ +KE KE +VEKK K EK++
Sbjct: 298 VEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKK 357
Query: 459 QE 460
E
Sbjct: 358 AE 359
>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
Length = 1220
Score = 40.0 bits (92), Expect = 0.005
Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 21/236 (8%)
Query: 254 EQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNRLQEVLNDYYKEKAENCVKLN 313
+Q L +R E+ ++ + E A E + ++ + NR QE+LN KE+ + V
Sbjct: 415 KQRELERQREEERRKEIERRE-AAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKA 473
Query: 314 TLEPLEDQDLPMNELDESEEEEMITVVLEEAKEKWDCES-----------ICSTYSNLYN 362
+ LE + +N+ E ++ + ++ + ES I L
Sbjct: 474 KKKTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQLQE 533
Query: 363 HPQLIKYQPKPKQIRISSKTGIPLN-------VLPKKGLTAKQTERIQMINGSDLPKVST 415
Q++ KQI + N V K+ L AK+ R + L +V
Sbjct: 534 SQQMLGRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHL--RDQLDEVEK 591
Query: 416 QPRSKNESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELLNLKKNVE 471
+ RSK + + + + ++E +++++K+ + A +L+++ QE++++ L+K E
Sbjct: 592 ETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQKE 647
>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
Length = 1721
Score = 40.0 bits (92), Expect = 0.005
Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 21/236 (8%)
Query: 254 EQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNRLQEVLNDYYKEKAENCVKLN 313
+Q L +R E+ ++ + E A E + ++ + NR QE+LN KE+ + V
Sbjct: 415 KQRELERQREEERRKEIERRE-AAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKA 473
Query: 314 TLEPLEDQDLPMNELDESEEEEMITVVLEEAKEKWDCES-----------ICSTYSNLYN 362
+ LE + +N+ E ++ + ++ + ES I L
Sbjct: 474 KKKTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQLQE 533
Query: 363 HPQLIKYQPKPKQIRISSKTGIPLN-------VLPKKGLTAKQTERIQMINGSDLPKVST 415
Q++ KQI + N V K+ L AK+ R + L +V
Sbjct: 534 SQQMLGRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHL--RDQLDEVEK 591
Query: 416 QPRSKNESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELLNLKKNVE 471
+ RSK + + + + ++E +++++K+ + A +L+++ QE++++ L+K E
Sbjct: 592 ETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQKE 647
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 40.0 bits (92), Expect = 0.005
Identities = 56/270 (20%), Positives = 123/270 (45%), Gaps = 45/270 (16%)
Query: 232 WSEETKSRFTEYSMTSSVMR------------RNEQLTLHDERFEKFYEQYD------DD 273
W ++ +SRFT++ T ++ ++EQ+ L E ++ +++D +D
Sbjct: 1445 WKKKAQSRFTQHQNTVKELQIQLELKSKEAYEKDEQINLLKEELDQQNKRFDCLKGEMED 1504
Query: 274 EIGALDNAE--LEGSIQVDSNRLQEVLNDYYKEKAENCVKLNTL-------EPLEDQDL- 323
+ ++ E LE ++ + R+ E L D+ +K LN + + +E ++L
Sbjct: 1505 DKSKMEKKESNLETELKSQTARIME-LEDHITQKTIEIESLNEVLKNYNQQKDIEHKELV 1563
Query: 324 -PMNELDESEEEEMITVVLEEAKEKWDCESICSTYSNLYNHPQLIKYQPKPKQIRISSKT 382
+ E EE+ V +EA+EK I + + +Y+ + + K K++
Sbjct: 1564 QKLQHFQELGEEKDNRV--KEAEEK-----ILTLENQVYS--MKAELETKKKELE----- 1609
Query: 383 GIPLNVLPKKGLTAKQTERIQMINGSDLPKVSTQPRSKNESKEDKRARKQAIKEERKERR 442
+ L+V K+ +R++ + + L ++ + K + + + + KEE+ ++
Sbjct: 1610 HVNLSVKSKEEELKALEDRLESESAAKLAELKRKAEQKIAAIKKQLLSQMEEKEEQYKKG 1669
Query: 443 VEKKANKLAFKLEKRRQEKELLNLK-KNVE 471
E ++L KL++R +E +L K K+VE
Sbjct: 1670 TESHLSELNTKLQEREREVHILEEKLKSVE 1699
>gi|31317305 M-phase phosphoprotein 10 [Homo sapiens]
Length = 681
Score = 39.7 bits (91), Expect = 0.006
Identities = 69/350 (19%), Positives = 140/350 (40%), Gaps = 50/350 (14%)
Query: 136 LDFDPDIVAALDDDFDFDDPDNLLEDDFILQANKATGEEEGMDIQKSENEDDSEWEDVDD 195
++ D DI DD+ D + EDD I EEE ++ SE ++D + ++ +D
Sbjct: 273 VESDEDITNVHDDELDSNK-----EDDEI-------AEEEAEELSISETDEDDDLQENED 320
Query: 196 EKGDSNDDYDSAGLLSDEDCMSVPGKTHRAIADHLFWSEETKSRFTEYSMTSSVMRRNEQ 255
K L D+ G + + S+E KS F + + NE+
Sbjct: 321 NKQHKESLKRVTFALPDDAETEDTG-----VLNVKKNSDEVKSSFEKRQE-----KMNEK 370
Query: 256 L-TLHDERFEKFYEQYDDDEIGAL--DNAELEGSIQVD-SNRLQEVLNDYYKEKAENCVK 311
+ +L E EK Q + +N+ LE ++ D + R+ V+ + + E+ +K
Sbjct: 371 IASLEKELLEKKPWQLQGEVTAQKRPENSLLEETLHFDHAVRMAPVITEETTLQLEDIIK 430
Query: 312 LNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEKWDCESICSTYSNLY---------- 361
+ D + + E E + L+ K K S+ Y Y
Sbjct: 431 QRIRDQAWDDVVRKEKPKEDAYEYKKRLTLDHEKSKL---SLAEIYEQEYIKLNQQKTAE 487
Query: 362 -NHPQLIKYQPKPKQIRISSKTGIPLNVLPK---------KGLTAKQTERIQMINGSDLP 411
+P+ ++ Q + + + +PK L A E + ++ SD
Sbjct: 488 EENPEHVEIQKMMDSLFLKLDALSNFHFIPKPPVPEIKVVSNLPAITMEEVAPVSVSDAA 547
Query: 412 KVSTQP-RSKNESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQE 460
++ + + KN++ + K A ++ ++++ERR +K ++ K +++R++
Sbjct: 548 LLAPEEIKEKNKAGDIKTAAEKTATDKKRERRKKKYQKRMKIKEKEKRRK 597
Score = 35.4 bits (80), Expect = 0.11
Identities = 70/307 (22%), Positives = 126/307 (41%), Gaps = 47/307 (15%)
Query: 173 EEEGMDIQKSENEDDSEWEDVDDEKGDSNDDYDSAGLLSDEDCMSVPGKTHRAIADHLFW 232
EEE D E ED +ED+D D D GL + S GK+
Sbjct: 220 EEERKDDNDEEEEDIDFFEDID-------SDEDEGGLFGSKKLKS--GKS---------- 260
Query: 233 SEETKSRFTEYSMTSSVMRRNEQLT-LHDERFEKFYEQYDDDEIGALDNAELEGSIQVDS 291
SR +Y + +E +T +HD+ + +DDEI + EL S +
Sbjct: 261 -----SRNLKYKDFFDPVESDEDITNVHDDELD---SNKEDDEIAEEEAEELSISETDED 312
Query: 292 NRLQEVLNDYYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEKWDCE 351
+ LQE N+ K+ E+ ++ P + + L+ + + + E+ +EK + E
Sbjct: 313 DDLQE--NEDNKQHKESLKRVTFALPDDAETEDTGVLNVKKNSDEVKSSFEKRQEKMN-E 369
Query: 352 SICSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKGLTAKQTERIQMINGSD-- 409
I S +L++ +P Q ++++ P N L ++ L R+ + +
Sbjct: 370 KIASL------EKELLEKKPWQLQGEVTAQKR-PENSLLEETLHFDHAVRMAPVITEETT 422
Query: 410 --LPKVSTQPRSKNESKED---KRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELL 464
L + Q R ++++ +D K K+ E +K ++ + +KL+ E QE L
Sbjct: 423 LQLEDIIKQ-RIRDQAWDDVVRKEKPKEDAYEYKKRLTLDHEKSKLSL-AEIYEQEYIKL 480
Query: 465 NLKKNVE 471
N +K E
Sbjct: 481 NQQKTAE 487
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 39.7 bits (91), Expect = 0.006
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 173 EEEGMDIQKSENEDDSEWEDVDDEKGDSNDDYDSAGLLSDEDCMSVPGKTHRAIADHLFW 232
EEE + SE + SE E + E+ + ++ D+A + D H A +
Sbjct: 1271 EEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQND-------DHDADDEDDGH 1323
Query: 233 SEETKSRFTEYSMTSSVMRRNE--QLTLHDERFEKFYEQYDDDEIGALDNAELEGS--IQ 288
E TK + E T ++ Q + D +K E+ D E LD+ E + S
Sbjct: 1324 LESTKKKELEEQPTREDVKEEPGVQESFLDANMQKSREKIKDKEETELDSEEEQPSHDTS 1383
Query: 289 VDSNRLQEVLNDYYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEK- 347
V S ++ +D+ + ++ K +E E++++P +ELD + + ++ EE+ E
Sbjct: 1384 VVSEQMAGSEDDH---EEDSHTKEELIELKEEEEIPHSELDLETVQAVQSLTQEESSEHE 1440
Query: 348 ---WDCESICSTYSNLYNHPQ 365
DCE + L ++ Q
Sbjct: 1441 GAYQDCEETLAACQTLQSYTQ 1461
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 39.7 bits (91), Expect = 0.006
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 173 EEEGMDIQKSENEDDSEWEDVDDEKGDSNDDYDSAGLLSDEDCMSVPGKTHRAIADHLFW 232
EEE + SE + SE E + E+ + ++ D+A + D H A +
Sbjct: 1271 EEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQND-------DHDADDEDDGH 1323
Query: 233 SEETKSRFTEYSMTSSVMRRNE--QLTLHDERFEKFYEQYDDDEIGALDNAELEGS--IQ 288
E TK + E T ++ Q + D +K E+ D E LD+ E + S
Sbjct: 1324 LESTKKKELEEQPTREDVKEEPGVQESFLDANMQKSREKIKDKEETELDSEEEQPSHDTS 1383
Query: 289 VDSNRLQEVLNDYYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEK- 347
V S ++ +D+ + ++ K +E E++++P +ELD + + ++ EE+ E
Sbjct: 1384 VVSEQMAGSEDDH---EEDSHTKEELIELKEEEEIPHSELDLETVQAVQSLTQEESSEHE 1440
Query: 348 ---WDCESICSTYSNLYNHPQ 365
DCE + L ++ Q
Sbjct: 1441 GAYQDCEETLAACQTLQSYTQ 1461
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 39.7 bits (91), Expect = 0.006
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 173 EEEGMDIQKSENEDDSEWEDVDDEKGDSNDDYDSAGLLSDEDCMSVPGKTHRAIADHLFW 232
EEE + SE + SE E + E+ + ++ D+A + D H A +
Sbjct: 1271 EEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQND-------DHDADDEDDGH 1323
Query: 233 SEETKSRFTEYSMTSSVMRRNE--QLTLHDERFEKFYEQYDDDEIGALDNAELEGS--IQ 288
E TK + E T ++ Q + D +K E+ D E LD+ E + S
Sbjct: 1324 LESTKKKELEEQPTREDVKEEPGVQESFLDANMQKSREKIKDKEETELDSEEEQPSHDTS 1383
Query: 289 VDSNRLQEVLNDYYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEK- 347
V S ++ +D+ + ++ K +E E++++P +ELD + + ++ EE+ E
Sbjct: 1384 VVSEQMAGSEDDH---EEDSHTKEELIELKEEEEIPHSELDLETVQAVQSLTQEESSEHE 1440
Query: 348 ---WDCESICSTYSNLYNHPQ 365
DCE + L ++ Q
Sbjct: 1441 GAYQDCEETLAACQTLQSYTQ 1461
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 39.3 bits (90), Expect = 0.008
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 20/141 (14%)
Query: 341 LEEAKEKWDCESICSTYSNLYNHPQLIKYQPK-PKQIRI--SSKTGIPLNVLPKKGLTAK 397
+EE ++ D S+ Y N + +L K + +++R+ S K+ I LNV K +
Sbjct: 161 IEELTKERDALSL-ELYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVKELK----R 215
Query: 398 QTERIQMINGSDLPKVSTQP------RSKNESKE-DKRARKQAIKEERKERRVEKKANKL 450
+ ER + + LP+V T R + E +E +K+ RKQ K R+E R+ ++ K+
Sbjct: 216 KLERAKFL----LPQVQTNTLQEEMWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKM 271
Query: 451 AFKLEK-RRQEKELLNLKKNV 470
+ EK RRQEK L +K +
Sbjct: 272 REQEEKMRRQEKRLREQEKEL 292
Score = 32.0 bits (71), Expect = 1.3
Identities = 47/244 (19%), Positives = 94/244 (38%), Gaps = 20/244 (8%)
Query: 232 WSEETKSRFTEYSMTSSVMRRNEQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDS 291
W +E + R E M R EQ DER + E+ + E +
Sbjct: 341 WEQEKQMREQEQKMRDQEERMWEQ----DERLREKEERMREQE-----------KMWEQE 385
Query: 292 NRLQEVLNDYYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEK-WDC 350
++QE +EK + E E + E EE+E L E KEK W+
Sbjct: 386 EKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWEQ 445
Query: 351 ESICSTYSNLYNHPQLIKYQPK----PKQIRISSKTGIPLNVLPKKGLTAKQTERIQMIN 406
E + ++ + I+ Q + K++ K + + ++ + E+
Sbjct: 446 EKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMRDQEQKMWDQ 505
Query: 407 GSDLPKVSTQPRSKNESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELLNL 466
+ + + R K E +++ Q ++ R+E++ +++ K + EK R+E+ +
Sbjct: 506 EERMWEQDERLREKEERMREQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREEERMRER 565
Query: 467 KKNV 470
+K +
Sbjct: 566 EKKM 569
Score = 29.3 bits (64), Expect = 8.2
Identities = 50/312 (16%), Positives = 120/312 (38%), Gaps = 15/312 (4%)
Query: 158 LLEDDFILQANKATGEEEGMDIQKSENEDDSEWEDVDDEKGDSNDDYDSAGLLSDEDCMS 217
L E + L+ K E+E ++ + +++ WE + + + L +++
Sbjct: 292 LREQEKELREQKKLREQE----EQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQM 347
Query: 218 VPGKTHRAIADHLFWSEETKSRFTEYSMTSSVMRRNEQLTLHDERFEKFYEQYDDDEIGA 277
+ + W ++ + R E M ++ + +E + E+ +E
Sbjct: 348 REQEQKMRDQEERMWEQDERLREKEERMREQEKMWEQEEKMQEEERIREREKKMREEEET 407
Query: 278 LDNAELEGSIQVDSNRLQEVLNDYYKEKAENCVKLNTLEPLEDQDLPMNELDES--EEEE 335
+ E + Q ++ QE + E KL E +++Q+ + E +E ++EE
Sbjct: 408 MREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEE 467
Query: 336 MITVVLEEAKEKWDCESICSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKGLT 395
M + K+ W E + ++ + ++ Q + + + K+
Sbjct: 468 M----WGQEKKMWRQEKMREQEDQMWEQEEKMRDQEQKMWDQEERMWEQDERLREKEERM 523
Query: 396 AKQTERIQMINGSDLPKVSTQPRSKNESKEDKRARKQAIKEERKERRVE-----KKANKL 450
+Q + Q K + + K +E+K ++ ++E K+ R E ++ K+
Sbjct: 524 REQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKM 583
Query: 451 AFKLEKRRQEKE 462
+ EK R+++E
Sbjct: 584 QEQEEKMREQEE 595
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 39.3 bits (90), Expect = 0.008
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 76 SGPSELIPSSTFSAHNRREEKEETLVIPSTGIKLPSSVFASEFEEDVGLLNKAAPVSGPR 135
+G E++ S N E+ + L + G S++ S ED + +
Sbjct: 2331 AGQPEVLSSQEMQVENELEDLIDEL-LERDGGSGNSTIIVSRSGEDESQEDVLMDEAPSN 2389
Query: 136 LDFDPDIVAALDDDFDFDDPDNLLEDDFILQANKATGEEEGMDIQKSENEDDSEWEDVDD 195
L + A +D + DP++ E ++ + +E+ ++ E E+D E + DD
Sbjct: 2390 LSQASTLQANREDSMNILDPEDEEEHTQEEDSSGSNEDEDDSQDEEEEEEEDEEDDQEDD 2449
Query: 196 E--KGDSNDDYDSAGLLSDED 214
E +GD +DD D + + DED
Sbjct: 2450 EGEEGDEDDDDDGSEMELDED 2470
>gi|145580615 KRI1 homolog [Homo sapiens]
Length = 709
Score = 39.3 bits (90), Expect = 0.008
Identities = 91/406 (22%), Positives = 164/406 (40%), Gaps = 57/406 (14%)
Query: 72 LKEPSGPSELIPSSTFSA-HNRREEKEETLVIPST-GIKLPSSVFASEFEEDVGLLNKAA 129
+ EP G S+L ++ F+A +NR E+EE + G + SS +SE +
Sbjct: 7 MPEPRGSSQLRVNAAFAARYNRYREREELQRLKDRYGDRDSSSDSSSESDS--------- 57
Query: 130 PVSGPRLDFDPDIVAALDDDFDFDDPDNLLEDDFILQANKATGEEEGMDIQKSENEDDSE 189
S R++FDP + DF +LL+ + + +++ ++ + DSE
Sbjct: 58 --SDERVEFDPQ------QERDFYKTLSLLK-----KKDPRIYQKDATFYNRTASSSDSE 104
Query: 190 WEDVDDEKGDSNDDYDSAGLLSDEDCMSVPGKTHRAIADHLFWSEETKSRFTEYSMTSSV 249
+D + L D + + K + + + E + R E S S V
Sbjct: 105 ----EDPEALEKQKKVRPMYLKDYERKVILEKAGKYVDEENSDGETSNHRLQETSSQSYV 160
Query: 250 MRRNEQLTLHDERFEKFYEQYDDDE-IGALDNAELEGSIQVDSNRLQEVLN--DYYKEKA 306
EQ L E F F E +D++ G ++ L+ + + QE + ++ K +
Sbjct: 161 ---EEQKQLK-ESFRAFVEDSEDEDGAGEGGSSLLQKRAKTRQEKAQEEADYIEWLKGQK 216
Query: 307 E--NCVKLNTLEPLED--QDLPMNELDESEEEEMITVVLEEAKEKWDCESICSTYSNLYN 362
E N L L L++ D ++E + + ++ EE +E+ + E ++
Sbjct: 217 EIRNPDSLKELTHLKEYWNDPELDEGERFLRDYILNKRYEEEEEEEEDEEEMEEEEGVHG 276
Query: 363 HPQLIKYQPKPKQIRISSKTGIPLNVLPKKGLTAKQTERIQMINGSDLPKVSTQPRSKNE 422
P + SS G L + ++ K R + D V T PRS
Sbjct: 277 PPVQLAVDD-------SSDEG-ELFLKKQEDFEQKYNFRFEE---PDSASVKTYPRSIAS 325
Query: 423 SKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELLNLKK 468
S K R++ +EE +ER+ +KA +K+ + K+L NLK+
Sbjct: 326 SVRRKDERRKEKREETRERKKREKA-------KKQEELKQLKNLKR 364
>gi|210147567 hypothetical protein LOC220081 [Homo sapiens]
Length = 696
Score = 39.3 bits (90), Expect = 0.008
Identities = 36/170 (21%), Positives = 70/170 (41%), Gaps = 22/170 (12%)
Query: 234 EETKSRFTEYSMTSSVMRRNEQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNR 293
E T E + + V ++ E+ L E F++ D+ I L+ +L D N
Sbjct: 298 ETTTKLAPEEHVNTKVQQKKEENVLEFASKENFWDGITDESIDKLEVEDL------DENF 351
Query: 294 LQEVLNDYYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEKWDCESI 353
L +K + N LE ED D+P+ +L ESE + ++L++ EK+
Sbjct: 352 LNSSYQTVFKTIIKEMAAHNELE--EDFDIPLTKLLESENRWKLVIMLKKNYEKF----- 404
Query: 354 CSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKGLTAKQTERIQ 403
+++ + + + +++ T +++ K +TE IQ
Sbjct: 405 ---------KETILRIKRRREAQKLTEMTSFTFHLMSKPTPEKPETEEIQ 445
>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 38.9 bits (89), Expect = 0.010
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 138 FDPDIVAALDDDFDFDDPDNLLEDDFILQANKATGEEEGMDIQKSENEDDSEWEDVDDEK 197
+DP+ A D D D D ED+ + K E+G + + E ED+ E + DD+K
Sbjct: 168 YDPEDQEAPDSDAQVDGVDKEEEDEEG-EDEKDXENEDGEEEELDEEEDEDEDVEGDDDK 226
Query: 198 GDSNDDYDSAGLLSDED 214
+ +++ + GL DED
Sbjct: 227 DEVSEEEEEFGLDKDED 243
>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 38.9 bits (89), Expect = 0.010
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 138 FDPDIVAALDDDFDFDDPDNLLEDDFILQANKATGEEEGMDIQKSENEDDSEWEDVDDEK 197
+DP+ A D D D D ED+ + K E+G + + E ED+ E + DD+K
Sbjct: 168 YDPEDQEAPDSDAQVDGVDKEEEDEEG-EDEKDXENEDGEEEELDEEEDEDEDVEGDDDK 226
Query: 198 GDSNDDYDSAGLLSDED 214
+ +++ + GL DED
Sbjct: 227 DEVSEEEEEFGLDKDED 243
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 38.9 bits (89), Expect = 0.010
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 418 RSKNESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELLNLKKNVEGLK 474
R K E E ++A KQ +KEER++ R E KL K K+ +EK L +K ++ K
Sbjct: 387 REKREKDEKEKAEKQRLKEERRKERQEALEAKLEEK-RKKEEEKRLREEEKRIKAEK 442
Score = 36.6 bits (83), Expect = 0.051
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 418 RSKNESKEDKRARKQAIKEERKERRVE---KKANKLAFKLEKRRQEKELLNLK 467
R+K E+K+ K K+ ++ER+E+R + +KA K K E+R++ +E L K
Sbjct: 366 RAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQEALEAK 418
Score = 35.0 bits (79), Expect = 0.15
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 373 PKQIRISSK--TGIPLNVLPKK---GLTAKQTERIQMINGSDLPKVSTQPRSKNESKEDK 427
PKQ +S T PL + KK G T K R+Q D ++ Q + + E +E +
Sbjct: 303 PKQHSSTSPFPTSTPLRRITKKFVKGSTEKNKLRLQR----DQERLGKQLKLRAEREEKE 358
Query: 428 RARKQA--IKEERKERRVEKKANKLAFKLEKRRQEKELLNLKKNVEGLKL 475
+ +++A KEE K+++ E+K K EK R+EK + K+ E +L
Sbjct: 359 KLKEEAKRAKEEAKKKKEEEKELK-----EKERREKREKDEKEKAEKQRL 403
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 38.9 bits (89), Expect = 0.010
Identities = 72/363 (19%), Positives = 138/363 (38%), Gaps = 73/363 (20%)
Query: 151 DFDDPDNLLE-DDFILQANKATGEEEGMDIQKSENEDDS-------------EWEDVDDE 196
DFD+ D L E ++ L+A + E + ++ +EN ++ + + DD
Sbjct: 52 DFDEDDILKELEELSLEAQGIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDN 111
Query: 197 KGDSNDDYDS-------------AGLLSDEDCMSVPGKTH-RAIADHLFW--SEETKSRF 240
+ +D DS +G D+D +P K +A + W SEE +
Sbjct: 112 DSEELEDKDSKSKKTAKPKVEMYSGSDDDDDFNKLPKKAKGKAQKSNKKWDGSEEDEDNS 171
Query: 241 TEYSMTSSVMRRNEQLTLHDERFEKFYEQYDDDEIGALDNAELEGSIQVDSNRLQEVLND 300
+ S + E DE + Q + + N E S +++ V
Sbjct: 172 KKIKERSRINSSGESGDESDEFLQSRKGQKKNQKNKPGPNIESGNEDDDASFKIKTVA-- 229
Query: 301 YYKEKAENCVKLNTLEPLEDQDLPMNELDESEEEEMITVVLEEAKEKWDCESICSTYSNL 360
++KAE K + +++ + +L E EE E T +++K+K
Sbjct: 230 --QKKAEK--KERERKKRDEEKAKLRKLKEKEELE--TGKKDQSKQK------------- 270
Query: 361 YNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKGLTAKQTERIQMINGSDLPKVSTQPRSK 420
+ Q K ++ + SK + V+P A+ + N D K + +
Sbjct: 271 -------ESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKG 323
Query: 421 NESKEDKRARKQAIK---------------EERKERRVEKKANKLAFKLEKRRQEKELLN 465
+ +++K +K K EE +++R E++ K +LE +R+E+E L
Sbjct: 324 EKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAKRKEEERLE 383
Query: 466 LKK 468
+K
Sbjct: 384 QEK 386
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform
b [Homo sapiens]
Length = 1524
Score = 38.9 bits (89), Expect = 0.010
Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 373 PKQIRISSKTGIPLNVLPKKGLTAKQT----ERIQMINGSDLPKVSTQP----------- 417
PK+I IS + NV K+ L + ++ ER +++ ++ ++ +
Sbjct: 280 PKRIHISQED----NVANKQTLASYRSKATKERDKLLKQEEMKSLAFEKAKLKREKADAL 335
Query: 418 RSKNESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELLNLK-KNVEGLK 474
+K + KEDK +++ +K+ +E R++KK K K+E+ ++ ++L K K VE LK
Sbjct: 336 EAKKKEKEDKEKKREELKKIVEEERLKKKEEKERLKVEREKEREKLREEKRKYVEYLK 393
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
a [Homo sapiens]
Length = 1556
Score = 38.9 bits (89), Expect = 0.010
Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 373 PKQIRISSKTGIPLNVLPKKGLTAKQT----ERIQMINGSDLPKVSTQP----------- 417
PK+I IS + NV K+ L + ++ ER +++ ++ ++ +
Sbjct: 280 PKRIHISQED----NVANKQTLASYRSKATKERDKLLKQEEMKSLAFEKAKLKREKADAL 335
Query: 418 RSKNESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELLNLK-KNVEGLK 474
+K + KEDK +++ +K+ +E R++KK K K+E+ ++ ++L K K VE LK
Sbjct: 336 EAKKKEKEDKEKKREELKKIVEEERLKKKEEKERLKVEREKEREKLREEKRKYVEYLK 393
>gi|83700233 eukaryotic translation initiation factor 3, subunit C
[Homo sapiens]
Length = 913
Score = 38.9 bits (89), Expect = 0.010
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 13/138 (9%)
Query: 139 DPDIVAALDDDFDFDDPDNLLEDDFILQANKATGEEEGMDIQKSENEDDSEWEDVDDEKG 198
+ D + D+D +D D + F+ + ++A E ++K ++ED+ D E
Sbjct: 175 EEDSEGSSDED---EDEDGVSAATFLKKKSEAPSGESRKFLKKMDDEDE------DSEDS 225
Query: 199 DSNDDYDSAGLLSDEDCMSVPGKTHRAIADHLFWSEETKSRFTEYSMTSSVMRRNEQLTL 258
+ ++D+D+ SD D GK A+A T E + R ++
Sbjct: 226 EDDEDWDTGSTSSDSDSEEEEGK-QTALASRFLKKAPTTD---EDKKAAEKKREDKAKKK 281
Query: 259 HDERFEKFYEQYDDDEIG 276
HD + ++ E+ +D+E G
Sbjct: 282 HDRKSKRLDEEEEDNEGG 299
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.130 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,120,055
Number of Sequences: 37866
Number of extensions: 964449
Number of successful extensions: 8588
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 279
Number of HSP's that attempted gapping in prelim test: 6021
Number of HSP's gapped (non-prelim): 2037
length of query: 475
length of database: 18,247,518
effective HSP length: 106
effective length of query: 369
effective length of database: 14,233,722
effective search space: 5252243418
effective search space used: 5252243418
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.