LTV1 13056

Name: LTV1	Sequence: fasta or formatted (475aa)		NCBI GI: 21361875
Description: LTV1 homolog		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 25 2 C cysteine 0.8 4 1 D aspartate 9.7 46 3 E glutamate 12.6 60 4 F phenylalanine 3.4 16 2 G glycine 3.4 16 1 H histidine 1.9 9 1 I isoleucine 4.2 20 1 K lysine 9.7 46 3 L leucine 9.3 44 2 M methionine 1.7 8 1 N asparagine 4.6 22 1 P proline 5.1 24 1 Q glutamine 4.2 20 1 R arginine 5.5 26 2 S serine 7.6 36 2 T threonine 3.6 17 1 V valine 4.4 21 2 W tryptophan 0.6 3 1 Y tyrosine 2.5 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LTV1 homolog ATRX 0.024 transcriptional regulator ATRX isoform 2 ATRX 0.024 transcriptional regulator ATRX isoform 1 SR140 0.023 U2-associated SR140 protein CGNL1 0.022 cingulin-like 1 TCHH 0.019 trichohyalin ESCO1 0.019 establishment of cohesion 1 homolog 1 MICAL3 0.018 microtubule associated monoxygenase, calponin and L... HTATSF1 0.017 HIV-1 Tat specific factor 1 HTATSF1 0.017 HIV-1 Tat specific factor 1 NEFM 0.017 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.017 neurofilament, medium polypeptide 150kDa isoform 2 ... ITSN1 0.016 intersectin 1 isoform ITSN-s ITSN1 0.016 intersectin 1 isoform ITSN-l GOLGA4 0.016 golgi autoantigen, golgin subfamily a, 4 MPHOSPH10 0.016 M-phase phosphoprotein 10 MYST3 0.016 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.016 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.016 MYST histone acetyltransferase (monocytic leukemia)... LOC283685 0.015 PREDICTED: golgi autoantigen, golgin subfamily a-li... HUWE1 0.015 HECT, UBA and WWE domain containing 1 KRI1 0.015 KRI1 homolog FLJ32682 0.015 hypothetical protein LOC220081 LOC647020 0.015 PREDICTED: similar to acidic (leucine-rich) nuclear... LOC647020 0.015 PREDICTED: similar to acidic (leucine-rich) nuclear... CHAF1A 0.015 chromatin assembly factor 1, subunit A (p150) EIF5B 0.015 eukaryotic translation initiation factor 5B BAZ1A 0.015 bromodomain adjacent to zinc finger domain, 1A isofo... BAZ1A 0.015 bromodomain adjacent to zinc finger domain, 1A isofo... EIF3C 0.015 eukaryotic translation initiation factor 3, subunit ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.