Search of human proteins with 11386181

Search of human proteins with 11386181

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11386181 H2.0-like homeobox [Homo sapiens]
         (488 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11386181 H2.0-like homeobox [Homo sapiens]                         978   0.0  
gi|6633798 BarH-like homeobox 2 [Homo sapiens]                         91   2e-18
gi|116174748 developing brain homeobox 2 [Homo sapiens]                91   3e-18
gi|4506049 hematopoietically expressed homeobox [Homo sapiens]         87   3e-17
gi|71274178 developing brain homeobox 1 [Homo sapiens]                 87   4e-17
gi|153218470 BarH-like homeobox 1 [Homo sapiens]                       82   8e-16
gi|28912912 NK6 transcription factor related, locus 2 [Homo sapi...    82   1e-15
gi|147901462 brain specific homeobox [Homo sapiens]                    82   1e-15
gi|89257348 homeo box HB9 [Homo sapiens]                               79   7e-15
gi|148746211 NK2 transcription factor related, locus 3 [Homo sap...    79   9e-15
gi|118766339 thyroid transcription factor 1 isoform 1 [Homo sapi...    77   3e-14
gi|4507715 thyroid transcription factor 1 isoform 2 [Homo sapiens]     77   3e-14
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap...    77   4e-14
gi|39930383 BarH-like homeobox 2 [Homo sapiens]                        77   4e-14
gi|46249382 paired-like homeobox 2a [Homo sapiens]                     76   8e-14
gi|12707580 paired-like homeobox 2b [Homo sapiens]                     73   5e-13
gi|63054872 ladybird homeobox 1 [Homo sapiens]                         73   5e-13
gi|4557673 pancreatic and duodenal homeobox 1 [Homo sapiens]           71   2e-12
gi|4502365 NK3 homeobox 2 [Homo sapiens]                               70   3e-12
gi|19923352 NK3 homeobox 1 [Homo sapiens]                              70   6e-12
gi|10140847 homeobox A2 [Homo sapiens]                                 69   7e-12
gi|157426823 NK2 homeobox 4 [Homo sapiens]                             69   7e-12
gi|24497556 homeobox A7 [Homo sapiens]                                 69   1e-11
gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens]                  69   1e-11
gi|31377777 NK2 homeobox 8 [Homo sapiens]                              67   3e-11
gi|14149728 BarH-like homeobox 1 [Homo sapiens]                        67   3e-11
gi|4504465 homeobox B2 [Homo sapiens]                                  67   4e-11
gi|4758090 NK2 transcription factor related, locus 5 [Homo sapiens]    67   5e-11
gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens]                   67   5e-11
gi|169636435 caudal type homeobox 2 [Homo sapiens]                     66   6e-11

>gi|11386181 H2.0-like homeobox [Homo sapiens]
          Length = 488

 Score =  978 bits (2529), Expect = 0.0
 Identities = 488/488 (100%), Positives = 488/488 (100%)

Query: 1   MFAAGLAPFYASNFSLWSAAYCSSAGPGGCSFPLDPAAVKKPSFCIADILHAGVGDLGAA 60
           MFAAGLAPFYASNFSLWSAAYCSSAGPGGCSFPLDPAAVKKPSFCIADILHAGVGDLGAA
Sbjct: 1   MFAAGLAPFYASNFSLWSAAYCSSAGPGGCSFPLDPAAVKKPSFCIADILHAGVGDLGAA 60

Query: 61  PEGLAGASAAALTAHLGSVHPHASFQAAARSPLRPTPVVAPSEVPAGFPQRLSPLSAAYH 120
           PEGLAGASAAALTAHLGSVHPHASFQAAARSPLRPTPVVAPSEVPAGFPQRLSPLSAAYH
Sbjct: 61  PEGLAGASAAALTAHLGSVHPHASFQAAARSPLRPTPVVAPSEVPAGFPQRLSPLSAAYH 120

Query: 121 HHHPQQQQQQQQPQQQQPPPPPRAGALQPPASGTRVVPNPHHSGSAPAPSSKDLKFGIDR 180
           HHHPQQQQQQQQPQQQQPPPPPRAGALQPPASGTRVVPNPHHSGSAPAPSSKDLKFGIDR
Sbjct: 121 HHHPQQQQQQQQPQQQQPPPPPRAGALQPPASGTRVVPNPHHSGSAPAPSSKDLKFGIDR 180

Query: 181 ILSAEFDPKVKEGNTLRDLTSLLTGGRPAGVHLSGLQPSAGQFFASLDPINEASAILSPL 240
           ILSAEFDPKVKEGNTLRDLTSLLTGGRPAGVHLSGLQPSAGQFFASLDPINEASAILSPL
Sbjct: 181 ILSAEFDPKVKEGNTLRDLTSLLTGGRPAGVHLSGLQPSAGQFFASLDPINEASAILSPL 240

Query: 241 NSNPRNSVQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKY 300
           NSNPRNSVQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKY
Sbjct: 241 NSNPRNSVQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKY 300

Query: 301 VTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKEAGEKPSGGAPAADG 360
           VTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKEAGEKPSGGAPAADG
Sbjct: 301 VTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKEAGEKPSGGAPAADG 360

Query: 361 EQDERSPSRSEGEAESESSDSESLDMAPSDTERTEGSERSLHQTTVIKAPVTGALITASS 420
           EQDERSPSRSEGEAESESSDSESLDMAPSDTERTEGSERSLHQTTVIKAPVTGALITASS
Sbjct: 361 EQDERSPSRSEGEAESESSDSESLDMAPSDTERTEGSERSLHQTTVIKAPVTGALITASS 420

Query: 421 AGSGGSSGGGGNSFSFSSASSLSSSSTSAGCASSLGGGGASELLPATQPTASSAPKSPEP 480
           AGSGGSSGGGGNSFSFSSASSLSSSSTSAGCASSLGGGGASELLPATQPTASSAPKSPEP
Sbjct: 421 AGSGGSSGGGGNSFSFSSASSLSSSSTSAGCASSLGGGGASELLPATQPTASSAPKSPEP 480

Query: 481 AQGALGCL 488
           AQGALGCL
Sbjct: 481 AQGALGCL 488


>gi|6633798 BarH-like homeobox 2 [Homo sapiens]
          Length = 279

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 71/231 (30%), Positives = 107/231 (46%), Gaps = 15/231 (6%)

Query: 164 GSAPAPSSKDLKFGIDRILSAEFDPKVKEGNTLRDLTSLLTGGRPAGVHLSGLQPSAGQF 223
           G   A   +   F ID ILS E     ++ +      SL+   RP  +H     PS  + 
Sbjct: 13  GQLKAARRRYKTFMIDEILSKETCDYFEKLSLYSVCPSLVV--RPKPLHSCTGSPSL-RA 69

Query: 224 FASLDPINEASAILSPLNSNPRNSVQ----HQFQDTF----PGPYAVLTKDT---MPQTY 272
           +  L  I     ++S L        Q    HQ  +      PG  A+ + ++    P   
Sbjct: 70  YPLLSVITRQPTVISHLVPATPGIAQALSCHQVTEAVSAEAPGGEALASSESETEQPTPR 129

Query: 273 KRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWR 332
           ++K   SR +F+ LQ  GLEK+F+ QKY++ PDR  LA  LGLT  QVK W+QNRRMKW+
Sbjct: 130 QKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWK 189

Query: 333 HSKEAQAQKDKDKEAGEKPSGGAPAADG-EQDERSPSRSEGEAESESSDSE 382
                  Q+   K  G       P ++  E +E+  S+++G+ + E S  +
Sbjct: 190 KMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQGQEQLEPSQGQ 240


>gi|116174748 developing brain homeobox 2 [Homo sapiens]
          Length = 339

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 61/156 (39%), Positives = 79/156 (50%), Gaps = 14/156 (8%)

Query: 256 FPGPYAVLTKDTMPQTYKRKRS-WSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLG 314
           FP   ++L   T     K +R    RAVFS  QRK LEK F+ QKY++K DRK+LA  LG
Sbjct: 165 FPREESMLPLLTQDSNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLG 224

Query: 315 LTDAQVKVWFQNRRMKWRHSKEAQAQKDK------------DKEAGEKPSGGAPAADGEQ 362
           L ++QVK+WFQNRRMKWR+SKE +   ++             + A   PS      D  Q
Sbjct: 225 LKESQVKIWFQNRRMKWRNSKEKEVLSNRCIQEVGLQEDPLSRSALGFPSPCPSIWDVPQ 284

Query: 363 DERSPSRSEGEAE-SESSDSESLDMAPSDTERTEGS 397
              SP   E   E SE    ES    P +    +G+
Sbjct: 285 QHSSPRWRENSPEPSERLIQESSGAPPPEANSLQGA 320


>gi|4506049 hematopoietically expressed homeobox [Homo sapiens]
          Length = 270

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 86/270 (31%), Positives = 114/270 (42%), Gaps = 34/270 (12%)

Query: 136 QQPPPPPRAGALQPPASGTRVVPNPHHSGSAPAPSSKDLKFGIDRILS---AEFDPKVKE 192
           Q P P P AGA+  P      +  P H    P P      F I+ IL    A   P    
Sbjct: 2   QYPHPGPAAGAVGVPLYAPTPLLQPAH----PTP------FYIEDILGRGPAAPTPAPTL 51

Query: 193 GNTLRDLTSLLTGGR-----PAGVHLSGLQPSAGQFFASLDPINEASAILSPLNSNPR-- 245
            +     TSL++  R     P  +H +    SA    A+  P         PL   PR  
Sbjct: 52  PSPNSSFTSLVSPYRTPVYEPTPIHPAFSHHSAAALAAAYGP----GGFGGPLYPFPRTV 107

Query: 246 NSVQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPD 305
           N   H      P    +L    + Q    KR   +  FSN Q   LEK+FE QKY++ P+
Sbjct: 108 NDYTHALLRHDPLGKPLLWSPFL-QRPLHKRKGGQVRFSNDQTIELEKKFETQKYLSPPE 166

Query: 306 RKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKEAGEKPSGGAPAADGEQDER 365
           RK+LA ML L++ QVK WFQNRR KWR  K+   Q +K +E          + D   D+R
Sbjct: 167 RKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQSNKKEE--------LESLDSSCDQR 218

Query: 366 SPSRSEGEAESESSDSESLDMAPSDTERTE 395
               SE + +  S DS     +P+  E  E
Sbjct: 219 QDLPSE-QNKGASLDSSQCSPSPASQEDLE 247


>gi|71274178 developing brain homeobox 1 [Homo sapiens]
          Length = 382

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 97/351 (27%), Positives = 129/351 (36%), Gaps = 94/351 (26%)

Query: 91  SPLRPTPVVAPSEVPAGFPQRLSPLSAAYHHHHPQQQQQQQQPQQQQPPPPPRAGALQPP 150
           S LRPTP +         PQ L    + +     +   +  +P    P   P A ++ PP
Sbjct: 15  SLLRPTPTLT-------LPQSLQSAFSGHSSFLVEDLIRISRPPAYLPRSVPTA-SMSPP 66

Query: 151 ASGTRVV-------------PNPHHSGSAP---APSSKD--LKFGIDRILSAEFDPKVKE 192
             G                 P     GS P   +P+S+   LKFG++ ILS+   P+ + 
Sbjct: 67  RQGAPTALTDTGASDLGSPGPGSRRGGSPPTAFSPASETTFLKFGVNAILSS--GPRTET 124

Query: 193 GNTLRDLTSLLTGGRPAGVHLSGLQPSAGQFFASLDPINEASAILSPLNSNPRNSVQHQF 252
              L       T   P              F  S  P   +S         P +S     
Sbjct: 125 SPALLQSVPPKTFAFP-------------YFEGSFQPFIRSSYF-------PASSSVVPI 164

Query: 253 QDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAM 312
             TF  P A   K        R+    RAVFS++QRK LEK F+ QKY++KPDRK+LAA 
Sbjct: 165 PGTFSWPLAARGKP-------RRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAK 217

Query: 313 LGLTDA---------------------------------------QVKVWFQNRRMKWRH 333
           LGL D+                                       QVK+WFQNRRMKWR+
Sbjct: 218 LGLKDSQDTARRTEPAPDSTPRPRASPGAPDLTSASPFFSPAGTFQVKIWFQNRRMKWRN 277

Query: 334 SKEAQAQKDKDKEAGEKPSGGAPAADGEQDERSPSRSEGEAESESSDSESL 384
           SKE +            P+   P  D     +    +E E E   S S  L
Sbjct: 278 SKERELLSSGGCREQTLPTKLNPHPDLSDVGQKGPGNEEEEEGPGSPSHRL 328


>gi|153218470 BarH-like homeobox 1 [Homo sapiens]
          Length = 254

 Score = 82.4 bits (202), Expect = 8e-16
 Identities = 48/120 (40%), Positives = 61/120 (50%), Gaps = 3/120 (2%)

Query: 269 PQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRR 328
           P T  +K   SR VF+ LQ  GLEKRFE QKY++ PDR  LA  LGL+  QVK W+QNRR
Sbjct: 135 PGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRR 194

Query: 329 MKWRH-SKEAQAQKDKDKEAGEKPSGGAPAAD--GEQDERSPSRSEGEAESESSDSESLD 385
           MKW+    +    +   K  G       P ++   EQ+    +    E   E SD    D
Sbjct: 195 MKWKKIVLQGGGLESPTKPKGRPKKNSIPTSEQLTEQERAKDAEKPAEVPGEPSDRSRED 254


>gi|28912912 NK6 transcription factor related, locus 2 [Homo
           sapiens]
          Length = 277

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 66/178 (37%), Positives = 87/178 (48%), Gaps = 27/178 (15%)

Query: 203 LTGGRPAGVHLSGLQPSAGQFFASLDPINEASAILSPLNSNP-----------RNSVQHQ 251
           L GG P    L+GL  SAG +F     +  A     PL   P           + +    
Sbjct: 75  LLGGLP---RLNGLASSAGVYFGPAAAV--ARGYPKPLAELPGRPPIFWPGVVQGAPWRD 129

Query: 252 FQDTFPGPYA-VLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLA 310
            +   P P   VL KD        K+  SR  FS  Q   LEK FE  KY+  P+R +LA
Sbjct: 130 PRLAGPAPAGGVLDKDG-------KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLA 182

Query: 311 AMLGLTDAQVKVWFQNRRMKW--RHSKE-AQAQKDKDKEAGEKPSGGAPAADGEQDER 365
             LG+T++QVKVWFQNRR KW  RH+ E A A+K +D +A +   GG+ A D ++  R
Sbjct: 183 YSLGMTESQVKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEYNR 240


>gi|147901462 brain specific homeobox [Homo sapiens]
          Length = 233

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 58/158 (36%), Positives = 81/158 (51%), Gaps = 22/158 (13%)

Query: 229 PINEASAILSPLNSNPRNSVQHQ---FQDTFPGPYAVLTKDT----MPQTYKRKRSWSRA 281
           P+     +L+P   +P +   H    F  T   P   L        +P  + R+R  +R 
Sbjct: 57  PLMPTPTLLAPHAHHPLHKGDHHHPYFLTTSGMPVPALFPHPQHAELPGKHCRRRK-ART 115

Query: 282 VFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQK 341
           VFS+ Q  GLEKRFEIQ+Y++ P+R +LA  L L++ QVK WFQNRRMK  H K+ +  +
Sbjct: 116 VFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMK--HKKQLRKSQ 173

Query: 342 DKDKEAGEKPSGGAPAADG-EQDERSPSRSEGEAESES 378
           D+ K           A DG E  E SP  SE    +E+
Sbjct: 174 DEPK-----------APDGPESPEGSPRGSEAATAAEA 200


>gi|89257348 homeo box HB9 [Homo sapiens]
          Length = 401

 Score = 79.3 bits (194), Expect = 7e-15
 Identities = 42/123 (34%), Positives = 64/123 (52%)

Query: 280 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQA 339
           R  F++ Q   LE +F++ KY+++P R ++A  L LT+ QVK+WFQNRRMKW+ SK+A+ 
Sbjct: 245 RTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKE 304

Query: 340 QKDKDKEAGEKPSGGAPAADGEQDERSPSRSEGEAESESSDSESLDMAPSDTERTEGSER 399
           Q  ++ E  +   GGA     E+              + S     D+  SD E  E  + 
Sbjct: 305 QAAQEAEKQKGGGGGAGKGGAEEPGAEELLGPPAPGDKGSGRRLRDLRDSDPEEDEDEDD 364

Query: 400 SLH 402
             H
Sbjct: 365 EDH 367



 Score = 34.3 bits (77), Expect = 0.26
 Identities = 39/134 (29%), Positives = 51/134 (38%), Gaps = 22/134 (16%)

Query: 353 GGAPAADGEQDERSPSRSEGEAESESSDSESLDMAPSDTERTEG-SERSLHQTTVIKAPV 411
           GG  A+ G     SP+ SE  A            AP+D  R E  S   L        P 
Sbjct: 46  GGGGASGGTSGSCSPASSEPPA------------APADRLRAESPSPPRLLAAHCALLPK 93

Query: 412 TGALITASSAGSGGSSGGGGNSFSFSSASSLSSSSTSAGCASSLGGGGASELLPATQPTA 471
            G L     AG GG   GGG+      A   ++++ +A  A++  GG A  L P      
Sbjct: 94  PGFL----GAGGGGGGTGGGHGGPHHHAHPGAAAAAAAAAAAAAAGGLALGLHPGGAQGG 149

Query: 472 SSAPKSPEPAQGAL 485
           +       PAQ AL
Sbjct: 150 AGL-----PAQAAL 158



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 16/40 (40%), Positives = 23/40 (57%)

Query: 416 ITASSAGSGGSSGGGGNSFSFSSASSLSSSSTSAGCASSL 455
           + A+++G+GG  GGGG S   S + S +SS   A  A  L
Sbjct: 34  LAAAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPADRL 73


>gi|148746211 NK2 transcription factor related, locus 3 [Homo
           sapiens]
          Length = 364

 Score = 79.0 bits (193), Expect = 9e-15
 Identities = 67/225 (29%), Positives = 97/225 (43%), Gaps = 25/225 (11%)

Query: 274 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 333
           R R   R +FS  Q   LE+RF+ Q+Y++ P+R+ LA+ L LT  QVK+WFQNRR K + 
Sbjct: 146 RSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKR 205

Query: 334 SKEAQAQKDKDKEAGEKPSGGAP--------AADGEQDERSPSRSEGEAESESSDSESLD 385
            ++     DK  E G       P          DG+      +++ G   S  + + S +
Sbjct: 206 QRQ-----DKSLELGAHAPPPPPRRVAVPVLVRDGKPCVTPSAQAYGAPYSVGASAYSYN 260

Query: 386 MAPSDTERTEGSERSLHQTTVIKAPVTGALITASSAGSGGSSGGGGNSFSFSSASSLSSS 445
             P+      G   S        A    A   +SS G    +GGGG     S+A++    
Sbjct: 261 SFPA-----YGYGNSAAAAAAAAAAAAAAAAYSSSYGCAYPAGGGGGGGGTSAATTAMQP 315

Query: 446 STSAG------CASSLGG-GGASELLPATQPTASSAPKSPEPAQG 483
           + SA         S+LGG G      P  Q TA+ A  +    QG
Sbjct: 316 ACSAAGGGPFVNVSNLGGFGSGGSAQPLHQGTAAGAACAQGTLQG 360


>gi|118766339 thyroid transcription factor 1 isoform 1 [Homo
           sapiens]
          Length = 401

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 57/191 (29%), Positives = 85/191 (44%), Gaps = 5/191 (2%)

Query: 268 MPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNR 327
           +P   +RKR   R +FS  Q   LE+RF+ QKY++ P+R+ LA+M+ LT  QVK+WFQN 
Sbjct: 186 LPSAPRRKR---RVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNH 242

Query: 328 RMKW-RHSKEAQAQKDKDKEAGEKPSGGAPAADGEQDERSPSRSEGEAESESSDSESLDM 386
           R K  R +K+  AQ+   +++G    GG      +Q  +  S           D +    
Sbjct: 243 RYKMKRQAKDKAAQQQLQQDSGGGGGGGGTGCPQQQQAQQQSPRRVAVPVLVKDGKPC-Q 301

Query: 387 APSDTERTEGSERSLHQTTVIKAPVTGALITASSAGSGGSSGGGGNSFSFSSASSLSSSS 446
           A +        +    Q    +A    A   A S GSGG+  G        SA      +
Sbjct: 302 AGAPAPGAASLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAGQSPDLA 361

Query: 447 TSAGCASSLGG 457
             A   ++L G
Sbjct: 362 HHAASPAALQG 372


>gi|4507715 thyroid transcription factor 1 isoform 2 [Homo sapiens]
          Length = 371

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 57/191 (29%), Positives = 85/191 (44%), Gaps = 5/191 (2%)

Query: 268 MPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNR 327
           +P   +RKR   R +FS  Q   LE+RF+ QKY++ P+R+ LA+M+ LT  QVK+WFQN 
Sbjct: 156 LPSAPRRKR---RVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNH 212

Query: 328 RMKW-RHSKEAQAQKDKDKEAGEKPSGGAPAADGEQDERSPSRSEGEAESESSDSESLDM 386
           R K  R +K+  AQ+   +++G    GG      +Q  +  S           D +    
Sbjct: 213 RYKMKRQAKDKAAQQQLQQDSGGGGGGGGTGCPQQQQAQQQSPRRVAVPVLVKDGKPC-Q 271

Query: 387 APSDTERTEGSERSLHQTTVIKAPVTGALITASSAGSGGSSGGGGNSFSFSSASSLSSSS 446
           A +        +    Q    +A    A   A S GSGG+  G        SA      +
Sbjct: 272 AGAPAPGAASLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAGQSPDLA 331

Query: 447 TSAGCASSLGG 457
             A   ++L G
Sbjct: 332 HHAASPAALQG 342


>gi|111120318 NK6 transcription factor related, locus 1 [Homo
           sapiens]
          Length = 367

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 2/95 (2%)

Query: 275 KRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWR-- 332
           KR  +R  FS  Q   LEK FE  KY+  P+R +LA  LG+T++QVKVWFQNRR KWR  
Sbjct: 235 KRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 294

Query: 333 HSKEAQAQKDKDKEAGEKPSGGAPAADGEQDERSP 367
           H+ E    K K     E+  G +   + + D   P
Sbjct: 295 HAAEMATAKKKQDSETERLKGASENEEEDDDYNKP 329



 Score = 30.4 bits (67), Expect = 3.8
 Identities = 39/142 (27%), Positives = 50/142 (35%), Gaps = 37/142 (26%)

Query: 367 PSRSEGEAESESSDSESLDMAPSDTERTEGSERSLHQTTVIKAPVTGALITA-------S 419
           P    G   S SS S S   +P             H    +K P TG L +        S
Sbjct: 41  PPLPAGPPSSSSSSSSSSSPSPP---------LGTHNPGGLKPPATGGLSSLGSPPQQLS 91

Query: 420 SAGSGG------------SSGGGGNSFSFSSASSLSSSSTSAGCASSLGGGGASELLPAT 467
           +A   G            +SG    S S S +SS SSSS SA  AS+     A+    A+
Sbjct: 92  AATPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAAS 151

Query: 468 QPT---------ASSAPKSPEP 480
            P          +S +P  P P
Sbjct: 152 SPAGLLAGLPRFSSLSPPPPPP 173


>gi|39930383 BarH-like homeobox 2 [Homo sapiens]
          Length = 387

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 76/247 (30%), Positives = 96/247 (38%), Gaps = 36/247 (14%)

Query: 100 APSEVPAGFPQRLSPLSAAYHHHHPQQQQQ------------QQQPQQQQPPPPPRAGAL 147
           +P  V    P+      A  HHHH    QQ            Q  PQQQQP PP      
Sbjct: 64  SPISVTMEPPEPHLVADATQHHHHLHHSQQPPPPAAAPTQSLQPLPQQQQPLPPQ----- 118

Query: 148 QPPASGTRVVPNPHHSGSAP-APSSKDLKFGIDRILSAEFDPKVKEGNTLRDLTSLLTGG 206
           QPP       P P   GSA  AP +    F I  IL         +   L       T  
Sbjct: 119 QPPP------PPPQQLGSAASAPRTSTSSFLIKDILG--------DSKPLAACAPYSTS- 163

Query: 207 RPAGVHLSGLQPSAGQFFASLDPINEASAILSPLNSNPRNSVQHQFQDTFP-GPYAVLTK 265
             +  H +  Q S      S  P  E     + L+    +    +   T   G   + + 
Sbjct: 164 -VSSPHHTPKQES-NAVHESFRPKLEQEDSKTKLDKREDSQSDIKCHGTKEEGDREITSS 221

Query: 266 DTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQ 325
              P    +K   +R  FS+ Q   LE+ FE QKY++  DR  LAA L LTD QVK W+Q
Sbjct: 222 RESPPVRAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQ 281

Query: 326 NRRMKWR 332
           NRR KW+
Sbjct: 282 NRRTKWK 288


>gi|46249382 paired-like homeobox 2a [Homo sapiens]
          Length = 284

 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 86/290 (29%), Positives = 117/290 (40%), Gaps = 61/290 (21%)

Query: 207 RPAGVHLSGLQPS---AGQFFASLDPINEASAILSPLNSNPRNSVQHQFQDTFPGPYAVL 263
           +P G   S L+P+   AG    +L   N A   L      P ++V ++F   FP P  + 
Sbjct: 29  QPGGFQYSPLRPAFPAAGPPCPALGSSNCALGALRDHQPAPYSAVPYKF---FPEPSGLH 85

Query: 264 TKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVW 323
            K        RK+   R  F++ Q K LE+ F    Y     R++LA  + LT+A+V+VW
Sbjct: 86  EK--------RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVW 137

Query: 324 FQNRRMKWRHSKEAQAQKDKDKEAGEKPSGGAPAADGEQDERSPSRSEGEAESESSDSES 383
           FQNRR K+R  + A + K     AG K                    +GEA   S D +S
Sbjct: 138 FQNRRAKFRKQERAASAKGAAGAAGAK--------------------KGEARCSSEDDDS 177

Query: 384 LDMAPSDTERTEGS-----ERSLHQTTVIKAPVTGALITASSAGSGGSSGGGGNSFSFSS 438
            +   S T  +  S        L    +  +P+  AL      GSG   G G        
Sbjct: 178 KESTCSPTPDSTASLPPPPAPGLASPRLSPSPLPVAL------GSGPGPGPGPQPL---- 227

Query: 439 ASSLSSSSTSAGCASSLGGG---GASELLPATQPTASSAPKSPEPAQGAL 485
                  +  AG A   GGG   GA+ELL A QP    A   P P  G L
Sbjct: 228 -----KGALWAGVAGGGGGGPGAGAAELLKAWQP----AESGPGPFSGVL 268


>gi|12707580 paired-like homeobox 2b [Homo sapiens]
          Length = 314

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 30/221 (13%)

Query: 250 HQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQL 309
           HQ       PY + T D      KRK+   R  F++ Q K LE+ F    Y     R++L
Sbjct: 73  HQSSPYAAVPYKLFT-DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREEL 131

Query: 310 AAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKEAGEKPSGGAPAADGEQDERSPSR 369
           A  + LT+A+V+VWFQNRR K+R  + A A            +  A A +G         
Sbjct: 132 ALKIDLTEARVQVWFQNRRAKFRKQERAAA------------AAAAAAKNG--------- 170

Query: 370 SEGEAESESSDSESLDMAPSDTERTEGSERSLHQTTVIKA--------PVTGALITASSA 421
           S G+    S D ES +   +D + T G   + + T    A           GA   A   
Sbjct: 171 SSGKKSDSSRDDESKEAKSTDPDSTGGPGPNPNPTPSCGANGGGGGGPSPAGAPGAAGPG 230

Query: 422 GSGGSSGGGGNSFSFSSASSLSSSSTSAGCASSLGGGGASE 462
           G GG  G GG + + ++A++ ++++ +A        GG  +
Sbjct: 231 GPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAAAGGPGQ 271


>gi|63054872 ladybird homeobox 1 [Homo sapiens]
          Length = 281

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 73/199 (36%), Positives = 97/199 (48%), Gaps = 35/199 (17%)

Query: 167 PAPSSKDLK-FGIDRILSAEFDPKVKEGNTLRDLTSLLTGGRPAGVHLSGLQPSAGQFFA 225
           PA S+K L  F I+ IL+    P V+   +L     LL     A  H  G  P AG+   
Sbjct: 26  PANSNKPLTPFSIEDILNK---PSVRRSYSLCGAAHLLAA---ADKHAQGGLPLAGR--- 76

Query: 226 SLDPINEASAILSPLNSNPRNSVQHQFQDTFPGP-----YAVLTKDTMP-----QTYKRK 275
                    A+LS   ++P  +++     TF G       A   +D M      QT K++
Sbjct: 77  ---------ALLS--QTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKR 125

Query: 276 RSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKW-RHS 334
           R  SR  F+N Q   LEKRF  QKY++  DR Q+A  LGLT+AQV  WFQNRR K  R  
Sbjct: 126 RK-SRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDL 184

Query: 335 KEAQAQKDKDKEAGEKPSG 353
           +E +A  +  K+ G  PSG
Sbjct: 185 EEMKADVESAKKLG--PSG 201


>gi|4557673 pancreatic and duodenal homeobox 1 [Homo sapiens]
          Length = 283

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 13/96 (13%)

Query: 269 PQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRR 328
           P+  KR    +R  ++  Q   LEK F   KY+++P R +LA ML LT+  +K+WFQNRR
Sbjct: 143 PEENKR----TRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRR 198

Query: 329 MKWRHSKEAQAQKDKDKEAGEKPS-GGAPAADGEQD 363
           MKW+        K++DK+ G   + GG   A+ EQD
Sbjct: 199 MKWK--------KEEDKKRGGGTAVGGGGVAEPEQD 226


>gi|4502365 NK3 homeobox 2 [Homo sapiens]
          Length = 333

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 36/80 (45%), Positives = 50/80 (62%)

Query: 258 GPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTD 317
           GP  V  ++  P   K ++  SRA FS+ Q   LE+RF  Q+Y++ P+R  LAA L LT+
Sbjct: 188 GPAGVAEEEEEPAAPKPRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTE 247

Query: 318 AQVKVWFQNRRMKWRHSKEA 337
            QVK+WFQNRR K +  + A
Sbjct: 248 TQVKIWFQNRRYKTKRRQMA 267


>gi|19923352 NK3 homeobox 1 [Homo sapiens]
          Length = 234

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 35/80 (43%), Positives = 51/80 (63%)

Query: 268 MPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNR 327
           +PQT K+ +  SRA FS+ Q   LE++F  QKY++ P+R  LA  L LT+ QVK+WFQNR
Sbjct: 116 LPQTPKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNR 175

Query: 328 RMKWRHSKEAQAQKDKDKEA 347
           R K +  + +    D +K +
Sbjct: 176 RYKTKRKQLSSELGDLEKHS 195



 Score = 32.3 bits (72), Expect = 1.00
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 4/72 (5%)

Query: 337 AQAQKDKDKEAGEKPSGGAPAADGEQDERS--PSRSEGEAE--SESSDSESLDMAPSDTE 392
           +Q Q+D + E   +P GG   A  + D+ S  P  +  EAE  +E+     L     D+E
Sbjct: 48  SQRQRDPEPEPEPEPEGGRSRAGAQNDQLSTGPRAAPEEAETLAETEPERHLGSYLLDSE 107

Query: 393 RTEGSERSLHQT 404
            T G+   L QT
Sbjct: 108 NTSGALPRLPQT 119


>gi|10140847 homeobox A2 [Homo sapiens]
          Length = 376

 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 280 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQA 339
           R  ++N Q   LEK F   KY+ +P R ++AA+L LT+ QVKVWFQNRRMK  H ++ Q 
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMK--HKRQTQC 204

Query: 340 QKDKDKEAGEKPSGGAPAADGEQDERS 366
           +++++ E   K    +   + +++E++
Sbjct: 205 KENQNSEGKCKSLEDSEKVEEDEEEKT 231


>gi|157426823 NK2 homeobox 4 [Homo sapiens]
          Length = 354

 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 77/304 (25%), Positives = 116/304 (38%), Gaps = 65/304 (21%)

Query: 55  GDLGAAPEGLAGASAAALTAHLGSVHPHASFQAAARSPLRPTPVVAPSEVPAGFPQRLSP 114
           G +  AP GL     AA  A   +  P  S QAA  + ++P+  +A     A      + 
Sbjct: 29  GAMDGAPPGLGAPLGAA--AAYRAPPPGPSSQAATVAGMQPSHAMAGHNAAAAAAAAAAA 86

Query: 115 LSAAYHHHHPQQQQQQQQPQQQQPPPPPRAGALQPPASGTRVVPNPHHSGSAPAPSSKDL 174
            +AA  +H P                 P        A G+       + G  PA +    
Sbjct: 87  AAAAATYHMP-----------------PGVSQFPHGAMGSYCNGGLGNMGELPAYTDGMR 129

Query: 175 KFGIDRILSAEFDPKVKEGNTLRDLTSLLTGGRPAGVHLSGLQPSAGQFFA--SLDPINE 232
                    A  DP+    +           G  AGV+++G+    G   A  SL P++ 
Sbjct: 130 GGAATGWYGANPDPRYSSISRFM--------GPSAGVNVAGMGSLTGIADAAKSLGPLHA 181

Query: 233 ASAILSPLNSNPRNSVQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLE 292
           A+A  +P                                 +RKR   R +FS  Q   LE
Sbjct: 182 AAAAAAP---------------------------------RRKR---RVLFSQAQVYELE 205

Query: 293 KRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKEAGEKPS 352
           +RF+ QKY++ P+R+ LA+M+ LT  QVK+WFQN R K +   + +A +   +E G  P 
Sbjct: 206 RRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQLQQEGGLGPP 265

Query: 353 GGAP 356
              P
Sbjct: 266 PPPP 269


>gi|24497556 homeobox A7 [Homo sapiens]
          Length = 230

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 35/100 (35%), Positives = 50/100 (50%)

Query: 276 RSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSK 335
           R   R  ++  Q   LEK F   +Y+T+  R ++A  L LT+ Q+K+WFQNRRMKW+   
Sbjct: 130 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 189

Query: 336 EAQAQKDKDKEAGEKPSGGAPAADGEQDERSPSRSEGEAE 375
           + +         G  PS  A AA  + DE      E + E
Sbjct: 190 KDEGPTAAAAPEGAVPSAAATAAADKADEEDDDEEEEDEE 229


>gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens]
          Length = 291

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 5/131 (3%)

Query: 218 PSAGQFFASLDPINEASAILSPLNSNPRNSVQHQFQDTFP-GPYAVLTKDTMPQTYKR-- 274
           PSA     S+  ++    +  P   + R  V+ +F       P+ V  +   P   +   
Sbjct: 105 PSALPAMPSVPTVSSLGGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPP 164

Query: 275 KRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH- 333
           KR   R  FS +Q   LEKRF  QKY+   +R  LA  L +TDAQVK WFQNRR KWR  
Sbjct: 165 KRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQ 224

Query: 334 -SKEAQAQKDK 343
            ++E +A++ +
Sbjct: 225 TAEEREAERQQ 235


>gi|31377777 NK2 homeobox 8 [Homo sapiens]
          Length = 239

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 3/106 (2%)

Query: 242 SNPRNSVQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYV 301
           S+  +S++    D+   P A   +   P +   KR   R +FS  Q   LE+RF  Q+Y+
Sbjct: 53  SSDESSLETSPPDSSQRPSA---RPASPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYL 109

Query: 302 TKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKEA 347
           + P+R+QLA++L LT  QVK+WFQN R K + ++   A +  D  A
Sbjct: 110 SAPEREQLASLLRLTPTQVKIWFQNHRYKLKRARAPGAAESPDLAA 155


>gi|14149728 BarH-like homeobox 1 [Homo sapiens]
          Length = 327

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)

Query: 264 TKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVW 323
           ++D+ P   K+ R  +R  F++ Q   LE+ FE QKY++  DR +LAA L LTD QVK W
Sbjct: 167 SRDSPPVRLKKPRK-ARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTW 225

Query: 324 FQNRRMKWR 332
           +QNRR KW+
Sbjct: 226 YQNRRTKWK 234


>gi|4504465 homeobox B2 [Homo sapiens]
          Length = 356

 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 11/103 (10%)

Query: 280 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQA 339
           R  ++N Q   LEK F   KY+ +P R ++AA+L LT+ QVKVWFQNRRMK  H ++ Q 
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMK--HKRQTQH 204

Query: 340 QKDKDKEAGEKPSGGA------PAADGEQDERSPSRSEGEAES 376
           ++  D   GE    GA      PA +       PS S    E+
Sbjct: 205 REPPD---GEPACPGALEDICDPAEEPAASPGGPSASRAAWEA 244


>gi|4758090 NK2 transcription factor related, locus 5 [Homo sapiens]
          Length = 324

 Score = 66.6 bits (161), Expect = 5e-11
 Identities = 32/73 (43%), Positives = 47/73 (64%)

Query: 266 DTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQ 325
           D   +   R+R   R +FS  Q   LE+RF+ Q+Y++ P+R QLA++L LT  QVK+WFQ
Sbjct: 128 DNAERPRARRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQ 187

Query: 326 NRRMKWRHSKEAQ 338
           NRR K +  ++ Q
Sbjct: 188 NRRYKCKRQRQDQ 200


>gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens]
          Length = 284

 Score = 66.6 bits (161), Expect = 5e-11
 Identities = 53/149 (35%), Positives = 71/149 (47%), Gaps = 28/149 (18%)

Query: 205 GGRPAGVHLSGLQPS---AGQFFASLDP-----INEASAILSPLNSNPRNSVQHQFQDTF 256
           GG PA    SGL  +   AG  F  +D       +  +A LSP +   R  + H +Q+  
Sbjct: 96  GGAPAVPGPSGLGGAGGLAGLTFPWMDSGRRFAKDRLTAALSPFSGTRR--IGHPYQNRT 153

Query: 257 PGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLT 316
           P                 KR   R  FS  Q   LE+RF  QKY+   +R  LA  L +T
Sbjct: 154 PP----------------KRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMT 197

Query: 317 DAQVKVWFQNRRMKWRH--SKEAQAQKDK 343
           DAQVK WFQNRR KWR   ++E +A++ +
Sbjct: 198 DAQVKTWFQNRRTKWRRQTAEEREAERHR 226


>gi|169636435 caudal type homeobox 2 [Homo sapiens]
          Length = 313

 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)

Query: 270 QTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRM 329
           Q   R +   R V+++ QR  LEK F   +Y+T   + +LAA LGL++ QVK+WFQNRR 
Sbjct: 180 QVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRA 239

Query: 330 KWRHSKEAQAQKDKDKEAGEKPSGGAPAADGEQDERSPSRSEGEAESESSDSES 383
           K R   + + Q+ + ++  + P    P     Q +  P RS  E  S  S  ++
Sbjct: 240 KERKINKKKLQQQQQQQPPQPP---PPPPQPPQPQPGPLRSVPEPLSPVSSLQA 290



 Score = 33.1 bits (74), Expect = 0.59
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 125 QQQQQQQQPQQQQPPPPPRAGALQPPASGTRVVPNP 160
           +++ QQQQ QQ   PPPP     QP     R VP P
Sbjct: 246 KKKLQQQQQQQPPQPPPPPPQPPQPQPGPLRSVPEP 281


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.126    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,906,935
Number of Sequences: 37866
Number of extensions: 1340718
Number of successful extensions: 23241
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 823
Number of HSP's that attempted gapping in prelim test: 12379
Number of HSP's gapped (non-prelim): 7799
length of query: 488
length of database: 18,247,518
effective HSP length: 106
effective length of query: 382
effective length of database: 14,233,722
effective search space: 5437281804
effective search space used: 5437281804
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.