TMEM48 12880

Name: TMEM48	Sequence: fasta or formatted (674aa)		NCBI GI: 21359924
Description: transmembrane protein 48		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 43 3 C cysteine 1.8 12 1 D aspartate 2.4 16 1 E glutamate 3.6 24 2 F phenylalanine 6.7 45 2 G glycine 3.9 26 2 H histidine 2.7 18 1 I isoleucine 6.7 45 4 K lysine 3.7 25 2 L leucine 11.4 77 4 M methionine 2.5 17 1 N asparagine 3.4 23 2 P proline 6.5 44 3 Q glutamine 4.9 33 2 R arginine 4.5 30 2 S serine 10.8 73 3 T threonine 5.5 37 3 V valine 6.8 46 2 W tryptophan 1.9 13 1 Y tyrosine 4.0 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane protein 48 NUPL2 0.007 nucleoporin like 2 LRRC16A 0.006 leucine rich repeat containing 16A UBE4B 0.006 ubiquitination factor E4B isoform 1 LOC100133408 0.005 PREDICTED: similar to mucin CAPRIN2 0.005 C1q domain containing 1 isoform 1 CAPRIN2 0.005 C1q domain containing 1 isoform 3 TTLL6 0.005 tubulin tyrosine ligase-like family, member 6 isofo... TTLL6 0.005 tubulin tyrosine ligase-like family, member 6 isofo... SYNJ1 0.005 synaptojanin 1 isoform a SYNJ1 0.005 synaptojanin 1 isoform d CREBBP 0.005 CREB binding protein isoform b CREBBP 0.005 CREB binding protein isoform a USP31 0.005 ubiquitin specific peptidase 31 RBM16 0.005 RNA-binding motif protein 16 LOC100134138 0.004 PREDICTED: similar to mucin, partial MUC12 0.004 PREDICTED: mucin 12 MUC3A 0.004 PREDICTED: mucin 3A, intestinal MLL 0.004 myeloid/lymphoid or mixed-lineage leukemia protein [... RIPK2 0.004 receptor-interacting serine-threonine kinase 2 IFI16 0.004 interferon, gamma-inducible protein 16 LOC100133714 0.004 PREDICTED: similar to Mucin-12, partial MUC12 0.004 PREDICTED: mucin 12, cell surface associated PDCD7 0.004 programmed cell death 7 EGR1 0.004 early growth response 1 MTSS1 0.004 metastasis suppressor 1 ABCA1 0.004 ATP-binding cassette, sub-family A member 1 BASP1 0.004 brain abundant, membrane attached signal protein 1 [... MKL2 0.004 megakaryoblastic leukemia 2 protein SEC24A 0.004 SEC24 related gene family, member A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.