SLC1A4 12822

Name: SLC1A4	Sequence: fasta or formatted (532aa)		NCBI GI: 21314632
Description: solute carrier family 1, member 4 isoform 1		Referenced in: Solute Carrier Families
Other entries for this name: alt prot [312aa] solute carrier family 1, member 4 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.7 62 2 C cysteine 1.3 7 1 D aspartate 2.8 15 1 E glutamate 5.1 27 3 F phenylalanine 4.1 22 2 G glycine 9.4 50 2 H histidine 1.3 7 2 I isoleucine 6.8 36 2 K lysine 3.6 19 2 L leucine 13.0 69 2 M methionine 2.3 12 2 N asparagine 3.8 20 2 P proline 4.9 26 3 Q glutamine 2.3 12 1 R arginine 3.4 18 2 S serine 7.1 38 3 T threonine 6.0 32 3 V valine 9.2 49 2 W tryptophan 0.6 3 1 Y tyrosine 1.5 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 solute carrier family 1, member 4 isoform 1 SLC1A4 0.581 solute carrier family 1, member 4 isoform 2 SLC1A5 0.541 solute carrier family 1 member 5 isoform 1 SLC1A3 0.401 solute carrier family 1 (glial high affinity glutam... SLC1A6 0.393 solute carrier family 1 (high affinity aspartate/glut... SLC1A5 0.392 solute carrier family 1 member 5 isoform 3 SLC1A5 0.375 solute carrier family 1 member 5 isoform 2 SLC1A1 0.370 solute carrier family 1, member 1 SLC1A2 0.367 excitatory amino acid transporter 2 SLC1A7 0.365 solute carrier family 1 (glutamate transporter), me... PTGER1 0.010 prostaglandin E receptor 1, subtype EP1 SHANK3 0.009 SH3 and multiple ankyrin repeat domains 3 PTPN22 0.006 protein tyrosine phosphatase, non-receptor type 22 ... ELN 0.005 elastin isoform e precursor ELN 0.005 elastin isoform d precursor ELN 0.005 elastin isoform c precursor ELN 0.005 elastin isoform b precursor ELN 0.005 elastin isoform a precursor SP1 0.005 Sp1 transcription factor isoform a SP1 0.005 Sp1 transcription factor isoform b LOC147645 0.005 PREDICTED: hypothetical protein LOC147645 0.005 PREDICTED: hypothetical protein LOC147645 0.005 PREDICTED: hypothetical protein CUGBP2 0.005 CUG triplet repeat, RNA binding protein 2 isoform 1 ... CUGBP2 0.005 CUG triplet repeat, RNA binding protein 2 isoform 2... SLC35D3 0.005 solute carrier family 35, member D3 SLC2A10 0.005 solute carrier family 2 member 10 TTN 0.004 titin isoform N2-A CUGBP2 0.004 CUG triplet repeat, RNA binding protein 2 isoform 4... NOVA2 0.004 neuro-oncological ventral antigen 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.