Guide to the Human Genome
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Name: PARVG Sequence: fasta or formatted (331aa) NCBI GI: 212286181
Description:

parvin, gamma

Referenced in:

Spectrin and Plectin Families

Other entries for this name:
alt mRNA [331aa] parvin, gamma
alt mRNA [331aa] parvin, gamma
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         20           2
 C cysteine            0.6          2           1
 D aspartate           5.4         18           1
 E glutamate          10.0         33           3
 F phenylalanine       4.2         14           2
 G glycine             3.6         12           2
 H histidine           3.0         10           2
 I isoleucine          3.3         11           1
 K lysine              8.8         29           3
 L leucine            17.2         57           4
 M methionine          1.2          4           1
 N asparagine          3.6         12           1
 P proline             5.7         19           2
 Q glutamine           4.2         14           1
 R arginine            2.7          9           1
 S serine              5.4         18           1
 T threonine           5.1         17           1
 V valine              7.3         24           2
 W tryptophan          0.9          3           1
 Y tyrosine            1.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   parvin, gamma 
PARVG                 1.000   parvin, gamma 
PARVG                 1.000   parvin, gamma 
PARVB                 0.376   parvin, beta isoform a 
PARVB                 0.376   parvin, beta isoform b 
PARVA                 0.363   parvin, alpha 
ACTN4                 0.035   actinin, alpha 4 
ACTN1                 0.032   actinin, alpha 1 isoform c 
ACTN1                 0.032   actinin, alpha 1 isoform a 
ACTN1                 0.032   actinin, alpha 1 isoform b 
DIXDC1                0.030   DIX domain containing 1 isoform a 
ASPM                  0.029   asp (abnormal spindle)-like, microcephaly associate...
FLNC                  0.021   gamma filamin isoform b 
FLNC                  0.021   gamma filamin isoform a 
SPTBN4                0.021   spectrin, beta, non-erythrocytic 4 isoform sigma1 [...
FLNA                  0.019   filamin A, alpha isoform 2 
FLNA                  0.019   filamin A, alpha isoform 1 
SPTBN1                0.019   spectrin, beta, non-erythrocytic 1 isoform 1 
FLNB                  0.019   filamin B, beta (actin binding protein 278) 
KIF15                 0.019   kinesin family member 15 
SPTBN2                0.016   spectrin, beta, non-erythrocytic 2 
DST                   0.016   dystonin isoform 4 
DST                   0.016   dystonin isoform 3 
DST                   0.016   dystonin isoform 2 
SPTBN1                0.016   spectrin, beta, non-erythrocytic 1 isoform 2 
PLEC1                 0.016   plectin 1 isoform 3 
NAV3                  0.016   neuron navigator 3 
MACF1                 0.016   microfilament and actin filament cross-linker protei...
DMD                   0.014   dystrophin Dp427c isoform 
DMD                   0.014   dystrophin Dp427p1 isoform 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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