Guide to the Human Genome
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Name: SCYL2 Sequence: fasta or formatted (929aa) NCBI GI: 47604944
Description:

SCY1-like 2 protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         37           1
 C cysteine            1.3         12           1
 D aspartate           4.2         39           2
 E glutamate           5.3         49           2
 F phenylalanine       4.7         44           2
 G glycine             4.8         45           2
 H histidine           1.3         12           1
 I isoleucine          5.2         48           2
 K lysine              7.9         73           2
 L leucine            11.3        105           3
 M methionine          3.4         32           2
 N asparagine          6.8         63           2
 P proline             7.2         67           2
 Q glutamine           6.6         61           2
 R arginine            2.3         21           1
 S serine              8.2         76           3
 T threonine           6.6         61           2
 V valine              6.7         62           1
 W tryptophan          0.6          6           1
 Y tyrosine            1.7         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SCY1-like 2 protein 
SCYL1                 0.053   SCY1-like 1 isoform B 
SCYL1                 0.053   SCY1-like 1 isoform A 
AURKA                 0.026   serine/threonine protein kinase 6 
AURKA                 0.026   serine/threonine protein kinase 6 
AURKA                 0.026   serine/threonine protein kinase 6 
AURKA                 0.026   serine/threonine protein kinase 6 
AURKA                 0.026   serine/threonine protein kinase 6 
AURKA                 0.026   serine/threonine protein kinase 6 
SCYL3                 0.025   SCY1-like 3 isoform 2 
SCYL3                 0.025   SCY1-like 3 isoform 1 
PLK3                  0.020   polo-like kinase 3 
SGK2                  0.019   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK2                  0.019   serum/glucocorticoid regulated kinase 2 isoform beta...
MAPKAPK3              0.018   mitogen-activated protein kinase-activated protein ki...
CDK10                 0.018   cyclin-dependent kinase 10 isoform a 
DAPK3                 0.018   death-associated protein kinase 3 
CDKL2                 0.017   cyclin-dependent kinase-like 2 
STK36                 0.017   serine/threonine kinase 36 
PSKH1                 0.016   protein serine kinase H1 
PRKG1                 0.016   protein kinase, cGMP-dependent, type I isoform 1 [H...
PRKG1                 0.016   protein kinase, cGMP-dependent, type I isoform 2 [Ho...
AURKC                 0.016   aurora kinase C isoform 2 
AURKC                 0.016   aurora kinase C isoform 1 
CDK10                 0.016   cyclin-dependent kinase 10 isoform d 
CDK10                 0.016   cyclin-dependent kinase 10 isoform c 
CDK10                 0.016   cyclin-dependent kinase 10 isoform b 
NEK5                  0.016   NIMA-related kinase 5 
AKT3                  0.016   AKT3 kinase isoform 1 
AKT3                  0.016   AKT3 kinase isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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