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Search of human proteins with 21071001
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21071001 autocrine motility factor receptor [Homo sapiens]
(643 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21071001 autocrine motility factor receptor [Homo sapiens] 1297 0.0
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 123 5e-28
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 123 5e-28
gi|21389515 ring finger protein 145 [Homo sapiens] 79 1e-14
gi|37622894 ring finger protein 126 [Homo sapiens] 58 2e-08
gi|21314654 ring finger protein 139 [Homo sapiens] 57 5e-08
gi|33859668 Rabring 7 [Homo sapiens] 56 9e-08
gi|37675277 ring finger protein 148 [Homo sapiens] 56 1e-07
gi|58331204 ring finger protein 150 [Homo sapiens] 55 2e-07
gi|29789407 ring finger protein 149 [Homo sapiens] 54 6e-07
gi|29788758 ring finger protein 130 [Homo sapiens] 54 6e-07
gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens] 53 1e-06
gi|7706039 ring finger protein 181 [Homo sapiens] 52 2e-06
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 50 8e-06
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 50 8e-06
gi|21040269 ring finger protein 133 [Homo sapiens] 50 8e-06
gi|38045931 ring finger protein 122 [Homo sapiens] 49 1e-05
gi|24797089 peroxisome biogenesis factor 10 isoform 1 [Homo sapi... 49 2e-05
gi|4505715 peroxisome biogenesis factor 10 isoform 2 [Homo sapiens] 49 2e-05
gi|109134327 PTD016 protein [Homo sapiens] 48 2e-05
gi|57165361 ring finger protein 165 [Homo sapiens] 47 5e-05
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 47 7e-05
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 47 7e-05
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 47 7e-05
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 47 7e-05
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 47 7e-05
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 47 7e-05
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 47 7e-05
gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens] 47 7e-05
gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens] 47 7e-05
>gi|21071001 autocrine motility factor receptor [Homo sapiens]
Length = 643
Score = 1297 bits (3356), Expect = 0.0
Identities = 643/643 (100%), Positives = 643/643 (100%)
Query: 1 MPLLFLERFPWPSLRTYTGLSGLALLGTIISAYRALSQPEAGPGEPDQLTASLQPEPPAP 60
MPLLFLERFPWPSLRTYTGLSGLALLGTIISAYRALSQPEAGPGEPDQLTASLQPEPPAP
Sbjct: 1 MPLLFLERFPWPSLRTYTGLSGLALLGTIISAYRALSQPEAGPGEPDQLTASLQPEPPAP 60
Query: 61 ARPSAGGPRARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKD 120
ARPSAGGPRARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKD
Sbjct: 61 ARPSAGGPRARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKD 120
Query: 121 KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPM 180
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPM
Sbjct: 121 KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPM 180
Query: 181 SSHGRVLSLLVAMLLSCCGLAAVCSITGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIH 240
SSHGRVLSLLVAMLLSCCGLAAVCSITGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIH
Sbjct: 181 SSHGRVLSLLVAMLLSCCGLAAVCSITGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIH 240
Query: 241 LWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRY 300
LWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
Sbjct: 241 LWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRY 300
Query: 301 LFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLF 360
LFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLF
Sbjct: 301 LFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLF 360
Query: 361 HNSCLRSWLEQDTSCPTCRMSLNIADNNRVREEHQGENLDENLVPVAAAEGRPRLNQHNH 420
HNSCLRSWLEQDTSCPTCRMSLNIADNNRVREEHQGENLDENLVPVAAAEGRPRLNQHNH
Sbjct: 361 HNSCLRSWLEQDTSCPTCRMSLNIADNNRVREEHQGENLDENLVPVAAAEGRPRLNQHNH 420
Query: 421 FFHFDGSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLVLQDL 480
FFHFDGSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLVLQDL
Sbjct: 421 FFHFDGSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLVLQDL 480
Query: 481 QLTRSVEITTDNILEGRIQVPFPTQRSDSIRPALNSPVERPSSDQEEGETSAQTERVPLD 540
QLTRSVEITTDNILEGRIQVPFPTQRSDSIRPALNSPVERPSSDQEEGETSAQTERVPLD
Sbjct: 481 QLTRSVEITTDNILEGRIQVPFPTQRSDSIRPALNSPVERPSSDQEEGETSAQTERVPLD 540
Query: 541 LSPRLEETLDFGEVEVEPSEVEDFEARGSRFSKSADERQRMLVQRKDELLQQARKRFLNK 600
LSPRLEETLDFGEVEVEPSEVEDFEARGSRFSKSADERQRMLVQRKDELLQQARKRFLNK
Sbjct: 541 LSPRLEETLDFGEVEVEPSEVEDFEARGSRFSKSADERQRMLVQRKDELLQQARKRFLNK 600
Query: 601 SSEDDAASESFLPSEGASSDPVTLRRRMLAAAAERRLQKQQTS 643
SSEDDAASESFLPSEGASSDPVTLRRRMLAAAAERRLQKQQTS
Sbjct: 601 SSEDDAASESFLPSEGASSDPVTLRRRMLAAAAERRLQKQQTS 643
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 123 bits (309), Expect = 5e-28
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 26/316 (8%)
Query: 76 YLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFG 135
YL S + VL A ++ L+ K++ + FG LR +E +HL ++ W + + F
Sbjct: 35 YLTKSSPSMAVLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSW-YAVTETCLAFT 93
Query: 136 VLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLVAMLL 195
V V F L+FL L +DR +++ SP H R++SL+
Sbjct: 94 VFRDDFSPRFVAL---FTLLLFLKCFHWLAEDRVDFMERSPNISWLFHCRIVSLMF---- 146
Query: 196 SCCGLAAVCSITGYTHGMHTLAFMAA--------ESLLVTVRTAHVILRYVIHLWDLNHE 247
L + +H H++ A E ++ + ++YV+H DL E
Sbjct: 147 ----LLGILDFLFVSHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQSE 202
Query: 248 GTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQR 307
W+ K Y+ YT+ + L M + +++ + + A +++ +R V
Sbjct: 203 NPWDNKAVYMLYTELFTGFIKVLL-YMAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTD 261
Query: 308 RIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSM-QAARKLPCGHLFHNSCLR 366
I R + NM + ATPEEL ++ C IC + M A++LPC H+FH SCLR
Sbjct: 262 AIMSR----RAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLR 317
Query: 367 SWLEQDTSCPTCRMSL 382
SW ++ +CPTCRM +
Sbjct: 318 SWFQRQQTCPTCRMDV 333
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 123 bits (309), Expect = 5e-28
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 26/316 (8%)
Query: 76 YLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFG 135
YL S + VL A ++ L+ K++ + FG LR +E +HL ++ W + + F
Sbjct: 35 YLTKSSPSMAVLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSW-YAVTETCLAFT 93
Query: 136 VLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLVAMLL 195
V V F L+FL L +DR +++ SP H R++SL+
Sbjct: 94 VFRDDFSPRFVAL---FTLLLFLKCFHWLAEDRVDFMERSPNISWLFHCRIVSLMF---- 146
Query: 196 SCCGLAAVCSITGYTHGMHTLAFMAA--------ESLLVTVRTAHVILRYVIHLWDLNHE 247
L + +H H++ A E ++ + ++YV+H DL E
Sbjct: 147 ----LLGILDFLFVSHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQSE 202
Query: 248 GTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQR 307
W+ K Y+ YT+ + L M + +++ + + A +++ +R V
Sbjct: 203 NPWDNKAVYMLYTELFTGFIKVLL-YMAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTD 261
Query: 308 RIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSM-QAARKLPCGHLFHNSCLR 366
I R + NM + ATPEEL ++ C IC + M A++LPC H+FH SCLR
Sbjct: 262 AIMSR----RAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLR 317
Query: 367 SWLEQDTSCPTCRMSL 382
SW ++ +CPTCRM +
Sbjct: 318 SWFQRQQTCPTCRMDV 333
>gi|21389515 ring finger protein 145 [Homo sapiens]
Length = 691
Score = 79.0 bits (193), Expect = 1e-14
Identities = 64/256 (25%), Positives = 116/256 (45%), Gaps = 14/256 (5%)
Query: 135 GVLNVQTVEEVVMWC--LWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLVA 192
G++ +Q V + L+ L M+++ L S + H R +SL +
Sbjct: 357 GLIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLF 416
Query: 193 MLLSCCGLAAVCSITGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEG 252
+L+ +A + I + H L + + S+L +++ + YV+ + + + E
Sbjct: 417 LLVFPAYMAYM--ICQFFHMDFWLLIIISSSILTSLQVLGTLFIYVLFMVEEFRKEPVEN 474
Query: 253 KGTYVYY---TDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRI 309
+YY T ++E + + + + +FG W M S++IF+ + ++ V R
Sbjct: 475 MDDVIYYVNGTYRLLEFLVALCVVAYGVSETIFGE-WTVMGSMIIFI---HSYYNVWLRA 530
Query: 310 RRH-KNYL--RVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLR 366
+ K++L R N +AT E+L +ND CAIC+ M++A PC H FH CL+
Sbjct: 531 QLGWKSFLLRRDAVNKIKSLPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLK 590
Query: 367 SWLEQDTSCPTCRMSL 382
WL +CP C L
Sbjct: 591 KWLYVQETCPLCHCHL 606
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 58.2 bits (139), Expect = 2e-08
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 322 MEARFAVATPEELAVNNDDCAICWDSM---QAARKLPCGHLFHNSCLRSWLEQDTSCPTC 378
++A V EE + +C +C D + R+LPC HLFH+ C+ WLEQ SCP C
Sbjct: 210 IQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVC 269
Query: 379 RMSL 382
R SL
Sbjct: 270 RKSL 273
>gi|21314654 ring finger protein 139 [Homo sapiens]
Length = 664
Score = 57.0 bits (136), Expect = 5e-08
Identities = 58/205 (28%), Positives = 84/205 (40%), Gaps = 38/205 (18%)
Query: 237 YVIHLWDLNHEGTWEGKGTYVYY---TDFVMELTLLSLDLMHHIHMLLFGN-----IWLS 288
Y + + D + WE YVYY T ++E +++FGN ++ S
Sbjct: 441 YTLFMIDGYYNVLWEKLDDYVYYVRSTGSIIEFIF---------GVVMFGNGAYTMMFES 491
Query: 289 MASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAV----ATPE----ELAVNNDD 340
+ + FM + + + + KN + M R AV + PE L ND
Sbjct: 492 GSKIRAFMMCLHAYFNIYLQA---KNGWKTF--MNRRTAVKKINSLPEIKGSRLQEINDV 546
Query: 341 CAICWDSMQ-AARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSL----NIADNNRVREEH- 394
CAIC+ +AR PC H FH CLR WL +CP C + +I DN+ V +
Sbjct: 547 CAICYHEFTTSARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDDIKDNSNVSNNNG 606
Query: 395 --QGENLDENLVPVAAAEGRPRLNQ 417
E V AAAE LN+
Sbjct: 607 FIPPNETPEEAVREAAAESDRELNE 631
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 56.2 bits (134), Expect = 9e-08
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 340 DCAICWDSM---QAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNR 389
+C +C + + R+LPC H FH+SC+ WLE +CP CR SLN D+ R
Sbjct: 227 ECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTR 279
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 55.8 bits (133), Expect = 1e-07
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 253 KGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRH 312
KG YV ++E+ + + + H M LF + ++A + R L V R
Sbjct: 169 KGVYV---TVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVWR-LTPRVPNSFTRR 224
Query: 313 KNYLRV-----VGNMEARFAVATPEELAVNNDDCAICWDSMQ---AARKLPCGHLFHNSC 364
++ ++ + ++ R EEL +N D+C +C+D+ + R L C H FH +C
Sbjct: 225 RSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKAC 284
Query: 365 LRSWLEQDTSCPTCRMSL 382
+ WL +CP C+ +
Sbjct: 285 IDPWLLAHRTCPMCKCDI 302
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 55.5 bits (132), Expect = 2e-07
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 287 LSMASLVIFMQLRYLFHEVQRRIRRHKNYL--RVVGNMEARFAVATPEELAVNNDDCAIC 344
+S+A LV + R+ + + R +R + + ++ R +E + D+CA+C
Sbjct: 222 ISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQIRTIKKGDKETESDFDNCAVC 281
Query: 345 WDSMQ---AARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSL 382
+ + R LPC HLFH SC+ WL +CP C+M++
Sbjct: 282 IEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNI 322
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 53.5 bits (127), Expect = 6e-07
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 287 LSMASLVIFMQLRYLFHEVQRRIRRH-KNYLRVVGNMEARFAVATPEELAVNNDDCAICW 345
+S+A L+ + R+L+ Q + H K +V+G + + + V+ ++CA+C
Sbjct: 214 ISLAWLIFYYIQRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCI 273
Query: 346 DSMQAA---RKLPCGHLFHNSCLRSWLEQDTSCPTCRMSL 382
++ + R LPC H+FH C+ WL +CP C++ +
Sbjct: 274 ENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDV 313
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 53.5 bits (127), Expect = 6e-07
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 277 IHMLLFGNIWLSMASLVIFMQ-LRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELA 335
I +++ + WL + F+Q +RY + + R + + + R +E
Sbjct: 203 IVLMIISSAWL----IFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETD 258
Query: 336 VNNDDCAICWDSMQ---AARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSL 382
+ D CA+C +S + R LPC H+FH SC+ WL + +CP C++++
Sbjct: 259 PDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNI 308
>gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens]
Length = 1208
Score = 52.8 bits (125), Expect = 1e-06
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 329 ATPEELAVNNDDCAICWDSMQAARK--LPCGHLFHNSCLRSWLEQDTSCPTCRM 380
+ P+E + C IC +++ LPC H FH C+R WL Q +CPTCR+
Sbjct: 1136 SNPDEEEEEEEPCVICHENLSPENLSVLPCAHKFHAQCIRPWLMQQGTCPTCRL 1189
>gi|7706039 ring finger protein 181 [Homo sapiens]
Length = 153
Score = 52.0 bits (123), Expect = 2e-06
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 341 CAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRVREEHQ 395
C + ++ + A ++PC HLFH+SC+ WL + SCP CR L D+ EEH+
Sbjct: 79 CLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYELPTDDD--TYEEHR 131
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 49.7 bits (117), Expect = 8e-06
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 317 RVVGNMEARFAVATPEELAVNNDDCAIC---WDSMQAARKLPCGHLFHNSCLRSWLEQDT 373
+ +G ++ R +E+ + D CA+C + R L C H+FH +C+ WL +
Sbjct: 253 KAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHR 312
Query: 374 SCPTCRMSL 382
+CP C+ +
Sbjct: 313 TCPMCKCDI 321
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 49.7 bits (117), Expect = 8e-06
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 317 RVVGNMEARFAVATPEELAVNNDDCAIC---WDSMQAARKLPCGHLFHNSCLRSWLEQDT 373
+ +G ++ R +E+ + D CA+C + R L C H+FH +C+ WL +
Sbjct: 227 KAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHR 286
Query: 374 SCPTCRMSL 382
+CP C+ +
Sbjct: 287 TCPMCKCDI 295
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 49.7 bits (117), Expect = 8e-06
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 22/129 (17%)
Query: 258 YYTDFVMELTL-LSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYL 316
Y FV+ T L+ + +HIH L I + +R R +
Sbjct: 190 YLVSFVIVTTATLAYFIFYHIHRLCLARI------------------QNRRWQRLTTDLQ 231
Query: 317 RVVGNMEARFAVATPEELAVNNDDCAICWDSMQA---ARKLPCGHLFHNSCLRSWLEQDT 373
G ++ R EE+ N D C IC++ + R L C H FH +C+ W+
Sbjct: 232 NTFGQLQLRVVKEGDEEINPNGDSCVICFERYKPNDIVRILTCKHFFHKNCIDPWILPHG 291
Query: 374 SCPTCRMSL 382
+CP C+ +
Sbjct: 292 TCPICKCDI 300
>gi|38045931 ring finger protein 122 [Homo sapiens]
Length = 155
Score = 48.9 bits (115), Expect = 1e-05
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Query: 272 DLMHHIHMLLFGN-IWLSMASLVIFMQLRYLFHEVQRRIRRHK-NYLRVVGNMEARFAVA 329
DL +I+M++FG I++ M SL+ Y +++ + + + Y VV +A+
Sbjct: 32 DLPLNIYMVIFGTGIFVFMLSLIFCC---YFISKLRNQAQSERYGYKEVVLKGDAK---- 84
Query: 330 TPEELAVNNDDCAICWDSMQAARKL---PCGHLFHNSCLRSWLEQDTSCPTC 378
+L + CA+C + + +L PC H FH CL WLE CP C
Sbjct: 85 ---KLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC 133
>gi|24797089 peroxisome biogenesis factor 10 isoform 1 [Homo
sapiens]
Length = 346
Score = 48.5 bits (114), Expect = 2e-05
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 272 DLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATP 331
DL + L G I S+ LV+ M L+ ++R R+ R + + A
Sbjct: 230 DLRARVSYRLLGVI--SLLHLVLSMGLQLYGFRQRQRARKEWRLHRGLSHRRASL----- 282
Query: 332 EELAVN-NDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCR 379
EE AV+ N C +C + + PCGHLF C+ +W CP CR
Sbjct: 283 EERAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCR 331
>gi|4505715 peroxisome biogenesis factor 10 isoform 2 [Homo sapiens]
Length = 326
Score = 48.5 bits (114), Expect = 2e-05
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 272 DLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATP 331
DL + L G I S+ LV+ M L+ ++R R+ R + + A
Sbjct: 210 DLRARVSYRLLGVI--SLLHLVLSMGLQLYGFRQRQRARKEWRLHRGLSHRRASL----- 262
Query: 332 EELAVN-NDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCR 379
EE AV+ N C +C + + PCGHLF C+ +W CP CR
Sbjct: 263 EERAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCR 311
>gi|109134327 PTD016 protein [Homo sapiens]
Length = 435
Score = 48.1 bits (113), Expect = 2e-05
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 282 FGNIWLSMASLVIFMQLRYLFHEVQR---RIRRHKNYLRVVGNMEARFAVATPEELAVNN 338
FGN+ + SL I + L YL ++ +R + LR+ + A+ + + +
Sbjct: 315 FGNV--TRWSLGILLALLYLILKLLEFFGHLRTFRQVLRIFFTQPSYGVAASKRQCSDVD 372
Query: 339 DDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCR 379
D C+IC Q L C H+F C+ W ++ +CP CR
Sbjct: 373 DICSICQAEFQKPILLICQHIFCEECMTLWFNREKTCPLCR 413
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 47.0 bits (110), Expect = 5e-05
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 338 NDDCAICWDSMQAA---RKLPCGHLFHNSCLRSWLEQDTSCPTCRMSL 382
++ C IC ++ R+LPC HLFH C+ WL CP CR+ +
Sbjct: 291 DEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 338
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 46.6 bits (109), Expect = 7e-05
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 341 CAIC---WDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNR 389
C++C + RKLPC H +H C+ WL ++++CP CR ++ +A NR
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV-LASGNR 620
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 46.6 bits (109), Expect = 7e-05
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 341 CAIC---WDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNR 389
C++C + RKLPC H +H C+ WL ++++CP CR ++ +A NR
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV-LASGNR 620
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 46.6 bits (109), Expect = 7e-05
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 341 CAIC---WDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCR 379
C +C ++S Q R LPC H FH C+ WL+ + +CP CR
Sbjct: 380 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 46.6 bits (109), Expect = 7e-05
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 341 CAIC---WDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCR 379
C +C ++S Q R LPC H FH C+ WL+ + +CP CR
Sbjct: 380 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 46.6 bits (109), Expect = 7e-05
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 341 CAIC---WDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCR 379
C +C ++S Q R LPC H FH C+ WL+ + +CP CR
Sbjct: 413 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 454
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 46.6 bits (109), Expect = 7e-05
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 341 CAIC---WDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCR 379
C +C ++S Q R LPC H FH C+ WL+ + +CP CR
Sbjct: 380 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 46.6 bits (109), Expect = 7e-05
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 341 CAIC---WDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCR 379
C +C ++S Q R LPC H FH C+ WL+ + +CP CR
Sbjct: 463 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504
>gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 46.6 bits (109), Expect = 7e-05
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 331 PEELAVNNDDCAICWDSMQA--ARKLPCGHLFHNSCLRSWLEQDTSCPTCR 379
P +A+ C IC + ++ R L CGH +H C + WL+ ++CP C+
Sbjct: 1947 PVRIALGASSCEICHEVFKSKNVRVLKCGHKYHKGCFKQWLKGQSACPACQ 1997
>gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 46.6 bits (109), Expect = 7e-05
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 331 PEELAVNNDDCAICWDSMQA--ARKLPCGHLFHNSCLRSWLEQDTSCPTCR 379
P +A+ C IC + ++ R L CGH +H C + WL+ ++CP C+
Sbjct: 1947 PVRIALGASSCEICHEVFKSKNVRVLKCGHKYHKGCFKQWLKGQSACPACQ 1997
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,433,068
Number of Sequences: 37866
Number of extensions: 1141561
Number of successful extensions: 6497
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 6205
Number of HSP's gapped (non-prelim): 427
length of query: 643
length of database: 18,247,518
effective HSP length: 109
effective length of query: 534
effective length of database: 14,120,124
effective search space: 7540146216
effective search space used: 7540146216
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.