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Search of human proteins with 210032112
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|210032112 hydroxysteroid (17-beta) dehydrogenase 13 isoform
B [Homo sapiens]
(264 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|210032112 hydroxysteroid (17-beta) dehydrogenase 13 isoform B... 525 e-149
gi|210032110 hydroxysteroid (17-beta) dehydrogenase 13 isoform A... 506 e-144
gi|142976729 estradiol 17-beta-dehydrogenase 11 [Homo sapiens] 326 1e-89
gi|40807363 epidermal retinal dehydrogenase 2 [Homo sapiens] 183 1e-46
gi|223646115 short chain dehydrogenase/reductase family 16C, mem... 174 5e-44
gi|25282469 retinol dehydrogenase 10 [Homo sapiens] 144 8e-35
gi|31543615 dehydrogenase/reductase (SDR family) member 3 [Homo ... 131 7e-31
gi|7706318 dehydrogenase/reductase (SDR family) member 7 [Homo s... 82 4e-16
gi|20149619 dehydrogenase/reductase (SDR family) member 7B [Homo... 75 6e-14
gi|40254992 carbonic reductase 4 [Homo sapiens] 65 5e-11
gi|109715829 short-chain dehydrogenase/reductase [Homo sapiens] 65 6e-11
gi|66933014 3-hydroxybutyrate dehydrogenase, type 2 [Homo sapiens] 65 8e-11
gi|7657478 retinol dehydrogenase 8 (all-trans) [Homo sapiens] 64 1e-10
gi|157739938 dehydrogenase/reductase (SDR family) member 7C [Hom... 64 1e-10
gi|32483357 peroxisomal short-chain alcohol dehydrogenase [Homo ... 62 7e-10
gi|186928839 retinol dehydrogenase 12 [Homo sapiens] 60 2e-09
gi|32455239 11-beta-hydroxysteroid dehydrogenase 1 [Homo sapiens] 57 1e-08
gi|5031765 11-beta-hydroxysteroid dehydrogenase 1 [Homo sapiens] 57 1e-08
gi|4504505 hydroxysteroid (17-beta) dehydrogenase 4 [Homo sapiens] 56 3e-08
gi|19743808 hydroxysteroid (17-beta) dehydrogenase 6 [Homo sapiens] 56 4e-08
gi|223718074 hydroxysteroid (17-beta) dehydrogenase 1 [Homo sapi... 55 5e-08
gi|59889578 dehydrogenase/reductase (SDR family) member 10 [Homo... 55 5e-08
gi|226371731 hydroxysteroid dehydrogenase like 1 isoform a [Homo... 55 6e-08
gi|225579078 retinol dehydrogenase 13 isoform 1 [Homo sapiens] 54 1e-07
gi|166795268 retinol dehydrogenase 11 [Homo sapiens] 54 1e-07
gi|31542939 hydroxyprostaglandin dehydrogenase 15-(NAD) isoform ... 54 2e-07
gi|126723750 dehydrogenase/reductase (SDR family) member 4 like ... 53 2e-07
gi|126723191 dehydrogenase/reductase (SDR family) member 4 like ... 53 2e-07
gi|7705855 hydroxysteroid (17-beta) dehydrogenase 12 [Homo sapiens] 52 7e-07
gi|44680136 3-hydroxybutyrate dehydrogenase, type 1 precursor [H... 51 1e-06
>gi|210032112 hydroxysteroid (17-beta) dehydrogenase 13 isoform B
[Homo sapiens]
Length = 264
Score = 525 bits (1351), Expect = e-149
Identities = 264/264 (100%), Positives = 264/264 (100%)
Query: 1 MNIILEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQ 60
MNIILEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQ
Sbjct: 1 MNIILEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQ 60
Query: 61 SILVLWDINKVKKEVGDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALL 120
SILVLWDINKVKKEVGDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALL
Sbjct: 61 SILVLWDINKVKKEVGDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALL 120
Query: 121 PSMMERNHGHIVTVASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCL 180
PSMMERNHGHIVTVASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCL
Sbjct: 121 PSMMERNHGHIVTVASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCL 180
Query: 181 CPVFVNTGFTKNPSTRLWPVLETDEVVRSLIDGILTNKKMIFVPSYINIFLRLQKFLPER 240
CPVFVNTGFTKNPSTRLWPVLETDEVVRSLIDGILTNKKMIFVPSYINIFLRLQKFLPER
Sbjct: 181 CPVFVNTGFTKNPSTRLWPVLETDEVVRSLIDGILTNKKMIFVPSYINIFLRLQKFLPER 240
Query: 241 ASAILNRMQNIQFEAVVGHKIKMK 264
ASAILNRMQNIQFEAVVGHKIKMK
Sbjct: 241 ASAILNRMQNIQFEAVVGHKIKMK 264
>gi|210032110 hydroxysteroid (17-beta) dehydrogenase 13 isoform A
[Homo sapiens]
Length = 300
Score = 506 bits (1304), Expect = e-144
Identities = 264/300 (88%), Positives = 264/300 (88%), Gaps = 36/300 (12%)
Query: 1 MNIILEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQ 60
MNIILEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQ
Sbjct: 1 MNIILEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQ 60
Query: 61 SILVLWDINK------------------------------------VKKEVGDVTIVVNN 84
SILVLWDINK VKKEVGDVTIVVNN
Sbjct: 61 SILVLWDINKRGVEETAAECRKLGVTAHAYVVDCSNREEIYRSLNQVKKEVGDVTIVVNN 120
Query: 85 AGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHEGIP 144
AGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHEGIP
Sbjct: 121 AGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHEGIP 180
Query: 145 YLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTRLWPVLETD 204
YLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTRLWPVLETD
Sbjct: 181 YLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTRLWPVLETD 240
Query: 205 EVVRSLIDGILTNKKMIFVPSYINIFLRLQKFLPERASAILNRMQNIQFEAVVGHKIKMK 264
EVVRSLIDGILTNKKMIFVPSYINIFLRLQKFLPERASAILNRMQNIQFEAVVGHKIKMK
Sbjct: 241 EVVRSLIDGILTNKKMIFVPSYINIFLRLQKFLPERASAILNRMQNIQFEAVVGHKIKMK 300
>gi|142976729 estradiol 17-beta-dehydrogenase 11 [Homo sapiens]
Length = 300
Score = 326 bits (835), Expect = 1e-89
Identities = 169/298 (56%), Positives = 205/298 (68%), Gaps = 36/298 (12%)
Query: 1 MNIILEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQ 60
M +L+ILLLL +I LES VK FIP+RRKSV GEIVLITGAGHGIGR T YEFAK +
Sbjct: 1 MKFLLDILLLLPLLIVCSLESFVKLFIPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLK 60
Query: 61 SILVLWDINK------------------------------------VKKEVGDVTIVVNN 84
S LVLWDINK VK E+GDV+I+VNN
Sbjct: 61 SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNN 120
Query: 85 AGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHEGIP 144
AG VY +DL +T+D +I KTFEVN+L HFW TKA LP+M + NHGHIVTVAS GH +P
Sbjct: 121 AGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP 180
Query: 145 YLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTRLWPVLETD 204
+L+ YCSSKFAAVGFH+ LT EL AL TG+KT+CLCP FVNTGF KNPST L P LE +
Sbjct: 181 FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPE 240
Query: 205 EVVRSLIDGILTNKKMIFVPSYINIFLRLQKFLPERASAILNRMQNIQFEAVVGHKIK 262
EVV L+ GILT +KMIF+PS I L++ LPER A+L + +++F+AV+G+K+K
Sbjct: 241 EVVNRLMHGILTEQKMIFIPSSIAFLTTLERILPERFLAVLKQKISVKFDAVIGYKMK 298
>gi|40807363 epidermal retinal dehydrogenase 2 [Homo sapiens]
Length = 309
Score = 183 bits (465), Expect = 1e-46
Identities = 102/280 (36%), Positives = 151/280 (53%), Gaps = 40/280 (14%)
Query: 6 EILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQSILVL 65
++ + L ++S LE+++ +P+ RK+VAGEIVLITGAG G+GR +FA+ S+LVL
Sbjct: 10 KLFIFLGKSLFSLLEAMIFALLPKPRKNVAGEIVLITGAGSGLGRLLALQFARLGSVLVL 69
Query: 66 WDINK-------------------------------------VKKEVGDVTIVVNNAGTV 88
WDINK VKKEVGDV+I++NNAG V
Sbjct: 70 WDINKEGNEETCKMAREAGATRVHAYTCDCSQKEGVYRVADQVKKEVGDVSILINNAGIV 129
Query: 89 YPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHEGIPYLIP 148
L DE + K+F+VN H W KA LP+M+ +HGH+V ++S G G+ L
Sbjct: 130 TGKKFLDCPDELMEKSFDVNFKAHLWTYKAFLPAMIANDHGHLVCISSSAGLSGVNGLAD 189
Query: 149 YCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPST---RLWPVLETDE 205
YC+SKFAA GF + E + GIKT+ +CP F+ TG + +T L P+LE
Sbjct: 190 YCASKFAAFGFAESVFVETFVQKQKGIKTTIVCPFFIKTGMFEGCTTGCPSLLPILEPKY 249
Query: 206 VVRSLIDGILTNKKMIFVPSYINIFLRLQKFLPERASAIL 245
V +++ IL K +++P + + L+ FLP + ++
Sbjct: 250 AVEKIVEAILQEKMYLYMPKLLYFMMFLKSFLPLKTGLLI 289
>gi|223646115 short chain dehydrogenase/reductase family 16C, member
6 [Homo sapiens]
Length = 323
Score = 174 bits (442), Expect = 5e-44
Identities = 105/284 (36%), Positives = 157/284 (55%), Gaps = 47/284 (16%)
Query: 1 MNIILEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQ 60
M++I + +LL Y +LESLV IP+++K+VAGEIVL TGAG G+GRQ FA+
Sbjct: 1 MDVIADTSVLLGKFPYYFLESLVYKIIPKKKKNVAGEIVLTTGAGSGLGRQLAIYFARFG 60
Query: 61 SILVLWDIN-------------------------------------KVKKEVGDVTIVVN 83
+ILVLWD+N +V+KE GDVTI+VN
Sbjct: 61 AILVLWDVNQEGNMETCRLAKEKGGKKVFPYTCDCSNRQEVYRVADQVRKEFGDVTILVN 120
Query: 84 NAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHEGI 143
NA V L D + K+F VN + HFW KA LP++++ NHGH+V ++S+ G GI
Sbjct: 121 NADLVTGKPFLDIPDHMVEKSFLVNAITHFWTCKAFLPAVIKANHGHLVCISSIAGVVGI 180
Query: 144 P------YLIPYCS-SKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTR 196
++ PY S SKFAA GF L EL + KT +K++ +CP F+NTG + +++
Sbjct: 181 NGLSDEYFVSPYYSASKFAAFGFAESLFFELTMIKKTEVKSTIVCPHFINTGMFEGCTSK 240
Query: 197 ---LWPVLETDEVVRSLIDGILTNKKMIFVPSYINIFLRLQKFL 237
L P+LE + V + +++ IL + + +P + I L L++ +
Sbjct: 241 YPFLLPILEQEYVAKKILNAILEEQVYLMIPKFAYIGLILKQII 284
>gi|25282469 retinol dehydrogenase 10 [Homo sapiens]
Length = 341
Score = 144 bits (363), Expect = 8e-35
Identities = 83/200 (41%), Positives = 115/200 (57%), Gaps = 7/200 (3%)
Query: 53 TYEFAKRQSILVLWDINKVKKEVGDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGH 112
T + KR+++ + + +V+KEVG+V+++VNNAG V LL DE I +T VN H
Sbjct: 116 TCDVGKRENVYLTAE--RVRKEVGEVSVLVNNAGVVSGHHLLECPDELIERTMMVNCHAH 173
Query: 113 FWITKALLPSMMERNHGHIVTVASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGK 172
FW TKA LP+M+E NHGHIVTVAS G + YC+SKF VGFH L+ EL+A K
Sbjct: 174 FWTTKAFLPTMLEINHGHIVTVASSLGLFSTAGVEDYCASKFGVVGFHESLSHELKAAEK 233
Query: 173 TGIKTSCLCPVFVNTGFTKNPSTR-----LWPVLETDEVVRSLIDGILTNKKMIFVPSYI 227
GIKT+ +CP V+TG + R P L+ D V+ + ILT++ MI P +
Sbjct: 234 DGIKTTLVCPYLVDTGMFRGCRIRKEIEPFLPPLKPDYCVKQAMKAILTDQPMICTPRLM 293
Query: 228 NIFLRLQKFLPERASAILNR 247
I ++ LP A + R
Sbjct: 294 YIVTFMKSILPFEAVVCMYR 313
>gi|31543615 dehydrogenase/reductase (SDR family) member 3 [Homo
sapiens]
Length = 302
Score = 131 bits (329), Expect = 7e-31
Identities = 84/275 (30%), Positives = 138/275 (50%), Gaps = 42/275 (15%)
Query: 7 ILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQSI-LVL 65
+++ + +IY +++ V +P + + ++ E VLITG G GIGRQ EFA+R + +VL
Sbjct: 9 LVMFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVL 68
Query: 66 W--------------------------DINK----------VKKEVGDVTIVVNNAGTVY 89
W D+ V+++VGD+TI+VNNA V+
Sbjct: 69 WGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVH 128
Query: 90 PADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHEGIPYLIPY 149
L+ + D+ + K+ +N LG FW TKA LP M+E +GHIV + SV IP I Y
Sbjct: 129 GKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDY 188
Query: 150 CSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTR---LWPVLETDEV 206
C+SK +A F LT L L G+ + + P +T + R L+P L+ + V
Sbjct: 189 CTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETV 246
Query: 207 VRSLIDGILTNKKMIFVPSYINIFLRLQKFLPERA 241
R ++ + N+ ++ +P ++ + L+ LP+ A
Sbjct: 247 ARRTVEAVQLNQALLLLPWTMHALVILKSILPQAA 281
>gi|7706318 dehydrogenase/reductase (SDR family) member 7 [Homo
sapiens]
Length = 339
Score = 82.4 bits (202), Expect = 4e-16
Identities = 61/195 (31%), Positives = 86/195 (44%), Gaps = 42/195 (21%)
Query: 38 IVLITGAGHGIGRQTTYEFAKRQSILVL-----WDINKVKK------------------- 73
+V +TGA GIG + Y+ +K LVL ++ +VK+
Sbjct: 52 VVWVTGASSGIGEELAYQLSKLGVSLVLSARRVHELERVKRRCLENGNLKEKDILVLPLD 111
Query: 74 ----------------EVGDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITK 117
E G + I+VNN G + + T + K E+N LG +TK
Sbjct: 112 LTDTGSHEAATKAVLQEFGRIDILVNNGGMSQRSLCMDTSLDVYRKLIELNYLGTVSLTK 171
Query: 118 ALLPSMMERNHGHIVTVASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKT 177
+LP M+ER G IVTV S+ G +P I YC+SK A GF GL +EL GI
Sbjct: 172 CVLPHMIERKQGKIVTVNSILGIISVPLSIGYCASKHALRGFFNGLRTELATY--PGIIV 229
Query: 178 SCLCPVFVNTGFTKN 192
S +CP V + +N
Sbjct: 230 SNICPGPVQSNIVEN 244
>gi|20149619 dehydrogenase/reductase (SDR family) member 7B [Homo
sapiens]
Length = 325
Score = 75.1 bits (183), Expect = 6e-14
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 76 GDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVA 135
G V I+VNNAG Y ++ T + + E N G +TKALLPSM++R GHIV ++
Sbjct: 134 GYVDILVNNAGISYRGTIMDTTVDVDKRVMETNYFGPVALTKALLPSMIKRRQGHIVAIS 193
Query: 136 SVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPST 195
S+ G IP+ Y +SK A F L +E++ + I+ + + P +++T + N T
Sbjct: 194 SIQGKMSIPFRSAYAASKHATQAFFDCLRAEME---QYEIEVTVISPGYIHTNLSVNAIT 250
>gi|40254992 carbonic reductase 4 [Homo sapiens]
Length = 237
Score = 65.5 bits (158), Expect = 5e-11
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 70 KVKKEVGDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHG 129
+++K +G V +VN AG L+ TK E++ N+LG KA + +M+++ G
Sbjct: 69 ELEKHLGRVNFLVNAAGINRDGLLVRTKTEDMVSQLHTNLLGSMLTCKAAMRTMIQQQGG 128
Query: 130 HIVTVASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGF 189
IV V S+ G +G Y +SK VGF R L E + + I+ + + P FV+T
Sbjct: 129 SIVNVGSIVGLKGNSGQSVYSASKGGLVGFSRALAKE---VARKKIRVNVVAPGFVHTDM 185
Query: 190 TKN 192
TK+
Sbjct: 186 TKD 188
>gi|109715829 short-chain dehydrogenase/reductase [Homo sapiens]
Length = 260
Score = 65.1 bits (157), Expect = 6e-11
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 5/130 (3%)
Query: 64 VLWDINKVKKEVGDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSM 123
+L + ++ + V I +NNAG P LLS F VN+L T+ SM
Sbjct: 77 ILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSM 136
Query: 124 MERN--HGHIVTVASVCGHEGIPYLIP--YCSSKFAAVGFHRGLTSELQALGKTGIKTSC 179
ERN GHI+ + S+ GH +P + Y ++K+A GL EL+ +T I+ +C
Sbjct: 137 KERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELRE-AQTHIRATC 195
Query: 180 LCPVFVNTGF 189
+ P V T F
Sbjct: 196 ISPGVVETQF 205
>gi|66933014 3-hydroxybutyrate dehydrogenase, type 2 [Homo sapiens]
Length = 245
Score = 64.7 bits (156), Expect = 8e-11
Identities = 41/180 (22%), Positives = 86/180 (47%), Gaps = 31/180 (17%)
Query: 36 GEIVLITGAGHGIGRQTTYEFAKRQSILVLWDINKVK----------------------- 72
G+++++T A GIG+ FA+ + ++ DIN+ K
Sbjct: 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQI 65
Query: 73 ----KEVGDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNH 128
EV + ++ N AG V+ +L ++++ + +N+ + + KA LP M+ +
Sbjct: 66 DQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKS 125
Query: 129 GHIVTVASVCGH-EGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNT 187
G+I+ ++SV +G+ Y ++K A +G + + ++ + GI+ +C+CP V+T
Sbjct: 126 GNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFI---QQGIRCNCVCPGTVDT 182
>gi|7657478 retinol dehydrogenase 8 (all-trans) [Homo sapiens]
Length = 311
Score = 64.3 bits (155), Expect = 1e-10
Identities = 34/92 (36%), Positives = 48/92 (52%)
Query: 76 GDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVA 135
G+V ++VNNAG L + F+ N G + KA+LP M R GHIV ++
Sbjct: 82 GEVDVLVNNAGMGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLPGMKRRRQGHIVVIS 141
Query: 136 SVCGHEGIPYLIPYCSSKFAAVGFHRGLTSEL 167
SV G +G+ + Y +SKFA GF L +L
Sbjct: 142 SVMGLQGVIFNDVYAASKFALEGFFESLAIQL 173
>gi|157739938 dehydrogenase/reductase (SDR family) member 7C [Homo
sapiens]
Length = 311
Score = 63.9 bits (154), Expect = 1e-10
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 56 FAKRQSILVLWDIN---KVKKEV----GDVTIVVNNAGTVYPADLLSTKDEEITKTFEVN 108
F + +L L DI+ V KEV G V I++NNA E K + N
Sbjct: 91 FTPKLVLLDLSDISCVPDVAKEVLDCYGCVDILINNASVKVKGPAHKISLELDKKIMDAN 150
Query: 109 ILGHFWITKALLPSMMERNHGHIVTVASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQ 168
G +TKALLP+M+ R G IV V ++ G GIP+ Y +SK AA+GF L +E++
Sbjct: 151 YFGPITLTKALLPNMISRRTGQIVLVNNIQGKFGIPFRTTYAASKHAALGFFDCLRAEVE 210
Query: 169 ALGKTGIKTSCLCPVFVNT 187
+ + S + P F+ +
Sbjct: 211 ---EYDVVISTVSPTFIRS 226
>gi|32483357 peroxisomal short-chain alcohol dehydrogenase [Homo
sapiens]
Length = 278
Score = 61.6 bits (148), Expect = 7e-10
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 76 GDVTIVVNNAGT-VYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTV 134
G + I+V+NA + ++ +E KT ++N+ +TKA++P M +R G +V V
Sbjct: 108 GGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIV 167
Query: 135 ASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPS 194
+S+ P PY SK A +G + L E L I+ +CL P + T F S
Sbjct: 168 SSIAAFSPSPGFSPYNVSKTALLGLTKTLAIE---LAPRNIRVNCLAPGLIKTSF----S 220
Query: 195 TRLWPVLETDEVVRSLI 211
LW E +E ++ +
Sbjct: 221 RMLWMDKEKEESMKETL 237
>gi|186928839 retinol dehydrogenase 12 [Homo sapiens]
Length = 316
Score = 60.1 bits (144), Expect = 2e-09
Identities = 67/245 (27%), Positives = 100/245 (40%), Gaps = 54/245 (22%)
Query: 1 MNIILEILLLLITIIYSYLESLVKFF---IPQRRKSVAGEIVLITGAGHGIGRQTTYEFA 57
M + L +L + +Y S+ KFF + + + G++V+ITGA GIG++T E A
Sbjct: 1 MLVTLGLLTSFFSFLYMVAPSIRKFFAGGVCRTNVQLPGKVVVITGANTGIGKETARELA 60
Query: 58 KRQS--ILVLWDINKVKKEVGDVTIVVNNAGT-VYPADLLSTKD----------EE---- 100
R + + D+ K + ++ + N+ V DL TK EE
Sbjct: 61 SRGARVYIACRDVLKGESAASEIRVDTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLH 120
Query: 101 ------------ITKTFE-------VNILGHFWITKALLPSMMERNHGHIVTVASVCGHE 141
+KT + VN LGHF +T LL + +V V+SV H
Sbjct: 121 ILINNAGVMMCPYSKTADGFETHLGVNHLGHFLLTYLLLERLKVSAPARVVNVSSVAHHI 180
Query: 142 G-IPYL-----------IPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGF 189
G IP+ YC SK A V F R L LQ TG+ T + P V +
Sbjct: 181 GKIPFHDLQSEKRYSRGFAYCHSKLANVLFTRELAKRLQG---TGVTTYAVHPGVVRSEL 237
Query: 190 TKNPS 194
++ S
Sbjct: 238 VRHSS 242
>gi|32455239 11-beta-hydroxysteroid dehydrogenase 1 [Homo sapiens]
Length = 292
Score = 57.4 bits (137), Expect = 1e-08
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 42/195 (21%)
Query: 9 LLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQSILVLWDI 68
+L + + Y Y + +F R + + G+ V++TGA GIGR+ Y AK + +V+
Sbjct: 11 ILGLFMAYYYYSANEEF----RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR 66
Query: 69 NK-------------------------------------VKKEVGDVTIVVNNAGTVYPA 91
+K K +G + +++ N T
Sbjct: 67 SKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSL 126
Query: 92 DLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHEGIPYLIPYCS 151
+L + K+ EVN L + +T A LP M+++++G IV V+S+ G P + Y +
Sbjct: 127 NLFHDDIHHVRKSMEVNFLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSA 185
Query: 152 SKFAAVGFHRGLTSE 166
SKFA GF + E
Sbjct: 186 SKFALDGFFSSIRKE 200
>gi|5031765 11-beta-hydroxysteroid dehydrogenase 1 [Homo sapiens]
Length = 292
Score = 57.4 bits (137), Expect = 1e-08
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 42/195 (21%)
Query: 9 LLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQSILVLWDI 68
+L + + Y Y + +F R + + G+ V++TGA GIGR+ Y AK + +V+
Sbjct: 11 ILGLFMAYYYYSANEEF----RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR 66
Query: 69 NK-------------------------------------VKKEVGDVTIVVNNAGTVYPA 91
+K K +G + +++ N T
Sbjct: 67 SKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSL 126
Query: 92 DLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHEGIPYLIPYCS 151
+L + K+ EVN L + +T A LP M+++++G IV V+S+ G P + Y +
Sbjct: 127 NLFHDDIHHVRKSMEVNFLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSA 185
Query: 152 SKFAAVGFHRGLTSE 166
SKFA GF + E
Sbjct: 186 SKFALDGFFSSIRKE 200
>gi|4504505 hydroxysteroid (17-beta) dehydrogenase 4 [Homo sapiens]
Length = 736
Score = 56.2 bits (134), Expect = 3e-08
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 54/217 (24%)
Query: 36 GEIVLITGAGHGIGRQTTYEFAKRQSILVLWDI--------------NKVKKEV------ 75
G +VL+TGAG G+GR FA+R +++V+ D+ +KV +E+
Sbjct: 9 GRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGK 68
Query: 76 ----------------------GDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGHF 113
G + +VVNNAG + DE+ V++ G F
Sbjct: 69 AVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSF 128
Query: 114 WITKALLPSMMERNHGHIVTVASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKT 173
+T+A M ++ +G I+ +S G G Y ++K +G L E
Sbjct: 129 QVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIE------- 181
Query: 174 GIKTSCLCPVFVNTGFTKNPSTRLWPVLETDEVVRSL 210
G K++ C NT N +R+ + +++V +L
Sbjct: 182 GRKSNIHC----NT-IAPNAGSRMTQTVMPEDLVEAL 213
>gi|19743808 hydroxysteroid (17-beta) dehydrogenase 6 [Homo sapiens]
Length = 317
Score = 55.8 bits (133), Expect = 4e-08
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 71 VKKEVGDVTI--VVNNAGTVYPADLLS-TKDEEITKTFEVNILGHFWITKALLPSMMERN 127
VK+ VGD + +VNNAG + P L E+ +VN++G +T ++LP ++ R
Sbjct: 97 VKEHVGDRGLWGLVNNAGILTPITLCEWLNTEDSMNMLKVNLIGVIQVTLSMLP-LVRRA 155
Query: 128 HGHIVTVASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNT 187
G IV V+S+ G ++ YC SK+ F L E+Q G+K S + P + T
Sbjct: 156 RGRIVNVSSILGRVAF-FVGGYCVSKYGVEAFSDILRREIQHF---GVKISIVEPGYFRT 211
Query: 188 GFT 190
G T
Sbjct: 212 GMT 214
>gi|223718074 hydroxysteroid (17-beta) dehydrogenase 1 [Homo
sapiens]
Length = 328
Score = 55.5 bits (132), Expect = 5e-08
Identities = 31/96 (32%), Positives = 47/96 (48%)
Query: 76 GDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVA 135
G V ++V NAG L + ++ + +VN++G + +A LP M R G ++
Sbjct: 83 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTG 142
Query: 136 SVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALG 171
SV G G+P+ YC+SKFA G L L G
Sbjct: 143 SVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFG 178
>gi|59889578 dehydrogenase/reductase (SDR family) member 10 [Homo
sapiens]
Length = 270
Score = 55.5 bits (132), Expect = 5e-08
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 37/181 (20%)
Query: 35 AGEIVLITGAGHGIGRQTTYEFAKRQSILVLWD--------------------------- 67
AG++V++TG G GIG F + +V+ D
Sbjct: 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQED 67
Query: 68 -----INKVKKEVGDVTIVVNNAGTVYPADLLS-TKDEEITKTFEVNILGHFWITKALLP 121
+++ + G + VVNNAG P T + + E+N+LG + +TK LP
Sbjct: 68 DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALP 127
Query: 122 SMMERNHGHIVTVASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLC 181
+ ++ G+++ ++S+ G G +PY ++K A + L + G++ +C+
Sbjct: 128 -YLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPY---GVRVNCIS 183
Query: 182 P 182
P
Sbjct: 184 P 184
>gi|226371731 hydroxysteroid dehydrogenase like 1 isoform a [Homo
sapiens]
Length = 330
Score = 55.1 bits (131), Expect = 6e-08
Identities = 57/222 (25%), Positives = 84/222 (37%), Gaps = 46/222 (20%)
Query: 12 ITIIYSYLESLVKFFIPQRRKSVA-----GEIVLITGAGHGIGRQTTYEFAKRQSILVLW 66
IT+I + + FIP+ G +++GA GIG+ E A R ++L
Sbjct: 38 ITVICDFYSLIRLHFIPRLGSRADLIKQYGRWAVVSGATDGIGKAYAEELASRGLNIILI 97
Query: 67 DINKVKKEV------------------------------------GDVTIVVNNAGTVYP 90
N+ K +V DV I+VNN G YP
Sbjct: 98 SRNEEKLQVVAKDIADTYKVETDIIVADFSSGREIYLPIREALKDKDVGILVNNVGVFYP 157
Query: 91 ADLLSTK--DEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHEGIPYLIP 148
T+ ++++ VNI + +LP M+ER G IVT++S + P L
Sbjct: 158 YPQYFTQLSEDKLWDIINVNIAAASLMVHVVLPGMVERKKGAIVTISSGSCCKPTPQLAA 217
Query: 149 YCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFT 190
+ +SK F R L E GI L P +V T T
Sbjct: 218 FSASKAYLDHFSRALQYE---YASKGIFVQSLIPFYVATSMT 256
>gi|225579078 retinol dehydrogenase 13 isoform 1 [Homo sapiens]
Length = 331
Score = 54.3 bits (129), Expect = 1e-07
Identities = 53/194 (27%), Positives = 77/194 (39%), Gaps = 53/194 (27%)
Query: 31 RKSVAGEIVLITGAGHGIGRQTTYEFAKRQSILVL------------WDIN--------- 69
+ ++ G+ V++TGA GIG+QT E A+R ++L DI
Sbjct: 33 KATIPGKTVIVTGANTGIGKQTALELARRGGNIILACRDMEKCEAAAKDIRGETLNHHVN 92
Query: 70 -----------------KVKKEVGDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGH 112
K+ +E V I++NNAG + T ++ F VN LGH
Sbjct: 93 ARHLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCPHW--TTEDGFEMQFGVNHLGH 150
Query: 113 FWITKALLPSMMERNHGHIVTVAS---VCGHEGIPYL----------IPYCSSKFAAVGF 159
F +T LL + I+ ++S V GH L YC SK A V F
Sbjct: 151 FLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFDDLNWQTRKYNTKAAYCQSKLAIVLF 210
Query: 160 HRGLTSELQALGKT 173
+ L+ LQ G T
Sbjct: 211 TKELSRRLQGSGVT 224
>gi|166795268 retinol dehydrogenase 11 [Homo sapiens]
Length = 318
Score = 53.9 bits (128), Expect = 1e-07
Identities = 61/250 (24%), Positives = 97/250 (38%), Gaps = 66/250 (26%)
Query: 10 LLITIIYSYLESLVKFFIPQRRKSVA-----------GEIVLITGAGHGIGRQTTYEFAK 58
L+ ++ L L+ PQ RK ++ G++V++TGA GIG++T E A+
Sbjct: 4 LMFPLLLLLLPFLLYMAAPQIRKMLSSGVCTSTVQLPGKVVVVTGANTGIGKETAKELAQ 63
Query: 59 RQS--ILVLWDINK---VKKEVGDVT---------------------------------I 80
R + L D+ K V KE+ T +
Sbjct: 64 RGARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDLSDTKSIRAFAKGFLAEEKHLHV 123
Query: 81 VVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGH 140
++NNAG + S + VN LGHF +T LL + E IV V+S+ H
Sbjct: 124 LINNAGVMMCP--YSKTADGFEMHIGVNHLGHFLLTHLLLEKLKESAPSRIVNVSSLAHH 181
Query: 141 EGIPYL------------IPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTG 188
G + + YC SK A + F + L L+ +G+ T + P V +
Sbjct: 182 LGRIHFHNLQGEKFYNAGLAYCHSKLANILFTQELARRLKG---SGVTTYSVHPGTVQSE 238
Query: 189 FTKNPSTRLW 198
++ S W
Sbjct: 239 LVRHSSFMRW 248
>gi|31542939 hydroxyprostaglandin dehydrogenase 15-(NAD) isoform 1
[Homo sapiens]
Length = 266
Score = 53.5 bits (127), Expect = 2e-07
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 50/200 (25%)
Query: 34 VAGEIVLITGAGHGIGRQTTY----------------------------EFAKRQSILVL 65
V G++ L+TGA GIGR +F ++++ +
Sbjct: 3 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALDEQFEPQKTLFIQ 62
Query: 66 WDI----------NKVKKEVGDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWI 115
D+ KV G + I+VNNAG ++ KT ++N++
Sbjct: 63 CDVADQQQLRDTFRKVVDHFGRLDILVNNAGV--------NNEKNWEKTLQINLVSVISG 114
Query: 116 TKALLPSMMERNHGH---IVTVASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGK 172
T L M ++N G I+ ++S+ G + YC+SK VGF R L
Sbjct: 115 TYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN-LMN 173
Query: 173 TGIKTSCLCPVFVNTGFTKN 192
+G++ + +CP FVNT ++
Sbjct: 174 SGVRLNAICPGFVNTAILES 193
>gi|126723750 dehydrogenase/reductase (SDR family) member 4 like 1
[Homo sapiens]
Length = 281
Score = 53.1 bits (126), Expect = 2e-07
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 81 VVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGH 140
+ N+ ++ LL T +E + ++N + KA++P M +R G + +ASV
Sbjct: 117 ITNSKRGLFWFTLLQTAEEAWDRNLDINGKALALMIKAVVPEMEKRGGGSVGFLASVAAF 176
Query: 141 EGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTRLWPV 200
+P PY SK A +G ++ L E L I+ +CL P + T F S LW
Sbjct: 177 RPLPGFSPYNVSKTALLGLNKTLAIE---LAPRNIRVNCLAPGLIKTSF----SRMLWMD 229
Query: 201 LETDEVVRSLI 211
E +E ++ +
Sbjct: 230 KEKEESMKETL 240
>gi|126723191 dehydrogenase/reductase (SDR family) member 4 like 2
[Homo sapiens]
Length = 232
Score = 53.1 bits (126), Expect = 2e-07
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 14/155 (9%)
Query: 27 IPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQSILVLWDINKVKKEVGDVTIVVNNAG 86
+ Q ++ GE + +TG +G+ E ++ K G + I+V+NA
Sbjct: 69 VDQAVATLQGEGLSVTGTVCHVGKAEDRERLVAMAV----------KLHGGIDILVSNAA 118
Query: 87 T-VYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHEGIPY 145
+ L+ +E KT ++N+ +TKA++P M +R G +V V+S+ P
Sbjct: 119 VNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPG 178
Query: 146 LIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCL 180
PY SK A +G + L E L I+ +CL
Sbjct: 179 FSPYNVSKTALLGLNNTLAIE---LAPRNIRVNCL 210
>gi|7705855 hydroxysteroid (17-beta) dehydrogenase 12 [Homo sapiens]
Length = 312
Score = 51.6 bits (122), Expect = 7e-07
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 42/195 (21%)
Query: 36 GEIVLITGAGHGIGRQTTYEFAKRQSILVLWD-----INKVKKEVGD------------- 77
GE ++TG+ GIG+ E AK +VL +++V E+ +
Sbjct: 50 GEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKFKVETRTIAVDF 109
Query: 78 -----------------VTIVVNNAGTVY--PADLLSTKDEE--ITKTFEVNILGHFWIT 116
+ I+VNN G Y P L D + I K +NIL +T
Sbjct: 110 ASEDIYDKIKTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVCKMT 169
Query: 117 KALLPSMMERNHGHIVTVASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIK 176
+ +LP M+ER+ G I+ ++S G +P L Y ++K F + L E ++ G+
Sbjct: 170 QLVLPGMVERSKGAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYRS---KGVF 226
Query: 177 TSCLCPVFVNTGFTK 191
+ P FV T K
Sbjct: 227 VQSVLPYFVATKLAK 241
>gi|44680136 3-hydroxybutyrate dehydrogenase, type 1 precursor [Homo
sapiens]
Length = 343
Score = 50.8 bits (120), Expect = 1e-06
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 81 VVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGH 140
+VNNAG ++ T E + EVN+ G +TK+ LP ++ R G +V ++S+ G
Sbjct: 141 LVNNAGISTFGEVEFTSLETYKQVAEVNLWGTVRMTKSFLP-LIRRAKGRVVNISSMLGR 199
Query: 141 EGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCP 182
P PYC +KF F L E+ L G+K S + P
Sbjct: 200 MANPARSPYCITKFGVEAFSDCLRYEMYPL---GVKVSVVEP 238
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.140 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,520,804
Number of Sequences: 37866
Number of extensions: 328379
Number of successful extensions: 745
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 655
Number of HSP's gapped (non-prelim): 99
length of query: 264
length of database: 18,247,518
effective HSP length: 100
effective length of query: 164
effective length of database: 14,460,918
effective search space: 2371590552
effective search space used: 2371590552
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.