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Search of human proteins with 209870067
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209870067 R3H domain and coiled-coil containing 1 [Homo
sapiens]
(253 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209870067 R3H domain and coiled-coil containing 1 [Homo sapiens] 501 e-142
gi|140560994 growth inhibition and differentiation related prote... 130 1e-30
gi|71061468 centromere protein E [Homo sapiens] 38 0.010
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 36 0.037
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 35 0.048
gi|50658071 phosphodiesterase 4D interacting protein isoform 5 [... 35 0.082
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 35 0.082
gi|14589860 aspartate beta-hydroxylase isoform c [Homo sapiens] 34 0.11
gi|14589864 aspartate beta-hydroxylase isoform b [Homo sapiens] 34 0.11
gi|14589866 aspartate beta-hydroxylase isoform a [Homo sapiens] 34 0.11
gi|21361639 DIPB protein [Homo sapiens] 34 0.11
gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform... 34 0.11
gi|18093112 ABT1-associated protein [Homo sapiens] 34 0.11
gi|42476296 tropomyosin 2 (beta) isoform 1 [Homo sapiens] 34 0.14
gi|24497589 aristaless related homeobox [Homo sapiens] 34 0.14
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 34 0.14
gi|164419758 bromodomain containing 2 [Homo sapiens] 33 0.18
gi|4826806 bromodomain containing 2 [Homo sapiens] 33 0.18
gi|17975763 myelin transcription factor 1 [Homo sapiens] 33 0.24
gi|207113199 erythrocyte membrane protein band 4.1-like 2 isofor... 33 0.24
gi|207113195 erythrocyte membrane protein band 4.1-like 2 isofor... 33 0.24
gi|4503579 erythrocyte membrane protein band 4.1-like 2 isoform ... 33 0.24
gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo sapiens] 33 0.24
gi|210147567 hypothetical protein LOC220081 [Homo sapiens] 33 0.24
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens] 33 0.24
gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens] 33 0.24
gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens] 33 0.24
gi|224589071 BMS1-like, ribosome assembly protein [Homo sapiens] 33 0.31
gi|20143946 potassium channel, subfamily K, member 10 isoform 3 ... 33 0.31
gi|20143944 potassium channel, subfamily K, member 10 isoform 2 ... 33 0.31
>gi|209870067 R3H domain and coiled-coil containing 1 [Homo sapiens]
Length = 253
Score = 501 bits (1291), Expect = e-142
Identities = 253/253 (100%), Positives = 253/253 (100%)
Query: 1 MTQGTEDLKGPGQRCENEPLLDPVGPEPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKE 60
MTQGTEDLKGPGQRCENEPLLDPVGPEPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKE
Sbjct: 1 MTQGTEDLKGPGQRCENEPLLDPVGPEPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKE 60
Query: 61 SLLEKRLVAEEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFV 120
SLLEKRLVAEEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFV
Sbjct: 61 SLLEKRLVAEEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFV 120
Query: 121 EELPGEKDLAHVVEIYDFEPALKTEDLLATFSEFQEKGFRIQWVDDTHALGIFPCLASAA 180
EELPGEKDLAHVVEIYDFEPALKTEDLLATFSEFQEKGFRIQWVDDTHALGIFPCLASAA
Sbjct: 121 EELPGEKDLAHVVEIYDFEPALKTEDLLATFSEFQEKGFRIQWVDDTHALGIFPCLASAA 180
Query: 181 EALTREFSVLKIRPLTQGTKQSKLKALQRPKLLRLVKERPQTNATVARRLVARALGLQHK 240
EALTREFSVLKIRPLTQGTKQSKLKALQRPKLLRLVKERPQTNATVARRLVARALGLQHK
Sbjct: 181 EALTREFSVLKIRPLTQGTKQSKLKALQRPKLLRLVKERPQTNATVARRLVARALGLQHK 240
Query: 241 KKERPAVRGPLPP 253
KKERPAVRGPLPP
Sbjct: 241 KKERPAVRGPLPP 253
>gi|140560994 growth inhibition and differentiation related protein
86 [Homo sapiens]
Length = 778
Score = 130 bits (326), Expect = 1e-30
Identities = 89/230 (38%), Positives = 129/230 (56%), Gaps = 18/230 (7%)
Query: 27 EPLGPESQSGKGDM---VEMATRFGSTLQLDLE-KGKESLLEKRLVAEEEEDEEEVEEDG 82
E E Q G + V R S+++ +E K E+ + + A EE E +DG
Sbjct: 526 EEFKTEEQDDSGSIEFGVSFPDRESSSMETSIEPKATETSHTEGITAIEESWESMFNDDG 585
Query: 83 PSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFVEELP----GEKDLAHVVEIYDF 138
C + LLQE++ N TK I++ D + E+P + + HV+EIYDF
Sbjct: 586 --DCLDP---RLLQELSGN-TKSRESIQEPRSDY--YNHEVPDIDLSDCEFPHVIEIYDF 637
Query: 139 EPALKTEDLLATFSEFQEKGFRIQWVDDTHALGIFPCLASAAEALTREFSVLKIRPLTQG 198
+TEDLL F +Q+KGF I+WVDDTHALG+F +A +AL + +++KIRPL+Q
Sbjct: 638 PQEFRTEDLLRVFCSYQKKGFDIKWVDDTHALGVFSSPITARDALGIKHTMVKIRPLSQA 697
Query: 199 TKQSKLKALQRPKLLRLVKERPQTNATVARRLVARALGLQHK--KKERPA 246
T+ +K KA + L+ KERP+T+A +ARRLV ALG++ K K ER A
Sbjct: 698 TRAAKAKARAYAEFLQPAKERPETSAALARRLVISALGVRSKQSKTEREA 747
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 37.7 bits (86), Expect = 0.010
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 46 RFGSTLQLDLEKGKESLLEKRLVAEEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKK 105
R LQ + ++ KE++ K +VA+ E EEE++ + C + E + E+ NL++K
Sbjct: 1449 RLQEVLQSESDQLKENI--KEIVAKHLETEEELKV---AHCCLKEQEETINELRVNLSEK 1503
Query: 106 EIQIEKIHLDTSSFVEELPGEKDLAHVVEIYDFEPALKTEDLLATFSEFQEK 157
E +I I + ++L + + EIY+ E + + SE QEK
Sbjct: 1504 ETEISTIQKQLEAINDKLQNK-----IQEIYEKEEQFNIKQI----SEVQEK 1546
Score = 30.8 bits (68), Expect = 1.2
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 46 RFGSTLQLDLEKGKESLLEKRLVAEEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKK 105
R TL+L+ ++ KESL E + A + E ++E++ + ++ E + ++ + +++K
Sbjct: 1896 RVEETLKLERDQLKESLQETK--ARDLEIQQELKT---ARMLSKEHKETVDKLREKISEK 1950
Query: 106 EIQIEKIHLDTSSFVEEL 123
IQI I D +EL
Sbjct: 1951 TIQISDIQKDLDKSKDEL 1968
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 35.8 bits (81), Expect = 0.037
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 31 PESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKRLVAEEEEDEEEVEEDGPSSCSEDD 90
PES+ G+ G L+L E +E E+ EEEE+EEE +E+ E++
Sbjct: 1049 PESRPVTGER-------GQLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEE 1101
Query: 91 YSELLQEITDNLTKKE 106
E +Q LTK +
Sbjct: 1102 EEENIQSSPPRLTKPQ 1117
Score = 32.3 bits (72), Expect = 0.41
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Query: 11 PGQRCENEPLLDPVGPEPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKRLVAE 70
PG++ E++ L+ P E E + + + G ++ D + K E+ ++
Sbjct: 1339 PGEKPEDD-LIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQEKEEPEIST 1397
Query: 71 EEED-------EEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFVEEL 123
E+ED EEE EED S +ED + + D+ + ++EK L SF E L
Sbjct: 1398 EKEDSARLDDHEEEEEEDEEPSHNEDHDA----DDEDDSHMESAEVEKEELPRESFKEVL 1453
Query: 124 PGEK 127
++
Sbjct: 1454 ENQE 1457
Score = 30.4 bits (67), Expect = 1.5
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 55 LEKGKESLLEKRLVAEEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEK 111
LE KES E+ EEE++EEE EE+ E++ E +E +N+ ++ K
Sbjct: 1062 LELSKESSEEEE---EEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTK 1115
Score = 28.9 bits (63), Expect = 4.5
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 27 EPLGPESQSGKGDM---VEMATRFGSTLQLDLEKGKESLLEKRLVAEEEEDEEEVEEDGP 83
E L P+ ++ + + V T G + DL K +E E+ EEEE+EE EE+G
Sbjct: 1316 EALLPQEENRREETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEEGG 1375
Query: 84 SSCSEDDYSELLQE 97
+ +D QE
Sbjct: 1376 GNVEKDPDGAKSQE 1389
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 35.4 bits (80), Expect = 0.048
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 14/95 (14%)
Query: 20 LLDPVGPEPLGP------------ESQSGKGDMVEMATR--FGSTLQLDLEKGKESLLEK 65
L P+ PLGP +S + +G+ E+ F ++ E+ +E E+
Sbjct: 411 LKTPITSVPLGPLASSPTKSSEGKDSGAAEGEKQEVGDGDCFSEKVEPAEEEAEEEEEEE 470
Query: 66 RLVAEEEEDEEEVEEDGPSSCSEDDYSELLQEITD 100
EEEE+EEE EE+ C SEL +E+ D
Sbjct: 471 EAEEEEEEEEEEEEEEEDEGCKGLFPSELDEELED 505
>gi|50658071 phosphodiesterase 4D interacting protein isoform 5
[Homo sapiens]
Length = 1132
Score = 34.7 bits (78), Expect = 0.082
Identities = 36/132 (27%), Positives = 44/132 (33%), Gaps = 19/132 (14%)
Query: 10 GPGQR-----CENEPLLDPVGPEPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLE 64
GP R C EP L VGP L G+ +E T S LD +
Sbjct: 197 GPSSRWSTSICTEEPALSEVGPPDLASTKVPPDGESMEEETPGSSVESLDASVQASPPQQ 256
Query: 65 KRLVAEEEEDEEEVEEDGPSSCSEDDYS---------ELLQEITDNLTKKEIQIEKIHLD 115
K +EE E +E G C DD + EL + L K IQ +
Sbjct: 257 K-----DEETERSAKELGKCDCCSDDQAPQHGCNHKLELALSMIKGLDYKPIQSPRGSRL 311
Query: 116 TSSFVEELPGEK 127
LPG K
Sbjct: 312 PIPVKSSLPGAK 323
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 34.7 bits (78), Expect = 0.082
Identities = 29/142 (20%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 1 MTQGTEDLKGPGQRCENEPLLDPVGPEPLGPESQSGK-------------GDMVEMATRF 47
+ Q TE+L+G ++ E + L E + Q + +EM
Sbjct: 721 LEQKTEELEGQIKKLEADSLEVKASKEQALQDLQQQRQLNTDLELRATELSKQLEMEKEI 780
Query: 48 GSTLQLDLEKGKESLLE-KRLVAEEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKE 106
S+ +LDL+K E+L K+ + ++EE+++ +++D + E +E+ + +
Sbjct: 781 VSSTRLDLQKKSEALESIKQKLTKQEEEKQILKQDFETLSQETKIQH--EELNNRIQTTV 838
Query: 107 IQIEKIHLDTSSFVEELPGEKD 128
+++K+ ++ + + EL KD
Sbjct: 839 TELQKVKMEKEALMTELSTVKD 860
>gi|14589860 aspartate beta-hydroxylase isoform c [Homo sapiens]
Length = 313
Score = 34.3 bits (77), Expect = 0.11
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 8 LKGPGQRCENEPLLDPVGPEP-LGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKR 66
L G +R +EP + P EP PE Q VE + ++ + ++ +SLL +
Sbjct: 106 LLGLKERSTSEPAVPPEEAEPHTEPEEQVP----VEAEPQ---NIEDEAKEQIQSLLHEM 158
Query: 67 LVAEEEEDEEEVEEDGPSS--CSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFVEE 122
+ AE E E+ +EDGP+ EDD + ++ D E ++ + S VEE
Sbjct: 159 VHAEHVEGEDLQQEDGPTGEPQQEDDEFLMATDVDDRFETLEPEVSHEETEHSYHVEE 216
Score = 28.9 bits (63), Expect = 4.5
Identities = 16/72 (22%), Positives = 34/72 (47%)
Query: 63 LEKRLVAEEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFVEE 122
LE + EE E VEE C++D + ++ + ++ ++ E++H DT +
Sbjct: 199 LEPEVSHEETEHSYHVEETVSQDCNQDMEEMMSEQENPDSSEPVVEDERLHHDTDDVTYQ 258
Query: 123 LPGEKDLAHVVE 134
+ E+ + +E
Sbjct: 259 VYEEQAVYEPLE 270
>gi|14589864 aspartate beta-hydroxylase isoform b [Homo sapiens]
Length = 299
Score = 34.3 bits (77), Expect = 0.11
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 8 LKGPGQRCENEPLLDPVGPEP-LGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKR 66
L G +R +EP + P EP PE Q VE + ++ + ++ +SLL +
Sbjct: 92 LLGLKERSTSEPAVPPEEAEPHTEPEEQVP----VEAEPQ---NIEDEAKEQIQSLLHEM 144
Query: 67 LVAEEEEDEEEVEEDGPSS--CSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFVEE 122
+ AE E E+ +EDGP+ EDD + ++ D E ++ + S VEE
Sbjct: 145 VHAEHVEGEDLQQEDGPTGEPQQEDDEFLMATDVDDRFETLEPEVSHEETEHSYHVEE 202
Score = 28.9 bits (63), Expect = 4.5
Identities = 16/72 (22%), Positives = 34/72 (47%)
Query: 63 LEKRLVAEEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFVEE 122
LE + EE E VEE C++D + ++ + ++ ++ E++H DT +
Sbjct: 185 LEPEVSHEETEHSYHVEETVSQDCNQDMEEMMSEQENPDSSEPVVEDERLHHDTDDVTYQ 244
Query: 123 LPGEKDLAHVVE 134
+ E+ + +E
Sbjct: 245 VYEEQAVYEPLE 256
>gi|14589866 aspartate beta-hydroxylase isoform a [Homo sapiens]
Length = 758
Score = 34.3 bits (77), Expect = 0.11
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 8 LKGPGQRCENEPLLDPVGPEP-LGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKR 66
L G +R +EP + P EP PE Q VE + ++ + ++ +SLL +
Sbjct: 106 LLGLKERSTSEPAVPPEEAEPHTEPEEQVP----VEAEPQ---NIEDEAKEQIQSLLHEM 158
Query: 67 LVAEEEEDEEEVEEDGPSS--CSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFVEE 122
+ AE E E+ +EDGP+ EDD + ++ D E ++ + S VEE
Sbjct: 159 VHAEHVEGEDLQQEDGPTGEPQQEDDEFLMATDVDDRFETLEPEVSHEETEHSYHVEE 216
Score = 28.9 bits (63), Expect = 4.5
Identities = 16/72 (22%), Positives = 34/72 (47%)
Query: 63 LEKRLVAEEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFVEE 122
LE + EE E VEE C++D + ++ + ++ ++ E++H DT +
Sbjct: 199 LEPEVSHEETEHSYHVEETVSQDCNQDMEEMMSEQENPDSSEPVVEDERLHHDTDDVTYQ 258
Query: 123 LPGEKDLAHVVE 134
+ E+ + +E
Sbjct: 259 VYEEQAVYEPLE 270
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 34.3 bits (77), Expect = 0.11
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 52 QLDLEKGKESLLEKRLVAEEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIE 110
+++ E G+ES E+ +EEE + EE ED SE+D E +++ ++ +++ Q E
Sbjct: 90 EIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQEE 148
>gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform a
[Homo sapiens]
Length = 845
Score = 34.3 bits (77), Expect = 0.11
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 56 EKGKESLLEKRLVAEEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEK 111
++GKE + +EEE + EE EE+G S ++D Y+ L ++ L KK+++ E+
Sbjct: 215 KQGKEKAKKAEQGSEEEGEGEEEEEEGGESKADDPYAHLSKKEKKKL-KKQMEYER 269
>gi|18093112 ABT1-associated protein [Homo sapiens]
Length = 851
Score = 34.3 bits (77), Expect = 0.11
Identities = 44/181 (24%), Positives = 70/181 (38%), Gaps = 48/181 (26%)
Query: 69 AEEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFVEELPGEKD 128
+E++E+E+E EE+ SEDD + +L + + IE D + P E
Sbjct: 272 SEDDEEEDEDEEEDEDEDSEDDDK---SDSGPDLARGKGNIETSSEDEDDTADLFPEESG 328
Query: 129 LAHVVEIYDFE------------------PALKTEDLLATFSEFQEKGFRIQWVDDTHAL 170
H D + LK +DLLA F+ F+ KG I
Sbjct: 329 FEHAWRELDKDAPRADEITRRLAVCNMDWDRLKAKDLLALFNSFKPKGGVI--------- 379
Query: 171 GIFPCLASAAEALTREFSVLKIRPLTQGTKQSKLKALQRP-KLLRLVKERPQTNATVARR 229
FSV KI P G ++ K + +Q P +LL + ++ P+ + T +
Sbjct: 380 ----------------FSV-KIYPSEFGKERMKEEQVQGPVELLSIPEDAPEKDWTSREK 422
Query: 230 L 230
L
Sbjct: 423 L 423
Score = 29.3 bits (64), Expect = 3.4
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 32/121 (26%)
Query: 59 KESLLE---KRLVAEEEEDEEE------------VEEDGPSSCSEDD-------YSELLQ 96
KE LL+ + +A EDEEE VEEDG + S+ D Y +LLQ
Sbjct: 528 KEELLDMDFQAYLASSSEDEEEIEEELQGDDGVNVEEDGKTKKSQKDDEEQIAKYRQLLQ 587
Query: 97 EITDNLTKKEIQIEKIHLDTSSFVEELPGEKDLAHVVEIYDFEPALKTEDLLATFSEFQE 156
I + K + D ++ +PG K+ A + + L+ +D L + +F E
Sbjct: 588 VIQEKEKKGK------ENDMEMEIKWVPGLKESAEEM----VKNKLEGKDKLTPWEQFLE 637
Query: 157 K 157
K
Sbjct: 638 K 638
>gi|42476296 tropomyosin 2 (beta) isoform 1 [Homo sapiens]
Length = 284
Score = 33.9 bits (76), Expect = 0.14
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 37 KGDMVEMATRFGSTLQLDLEKGKESLLEKRLVAEEE-EDEEEVEEDGPSSCSEDDYSELL 95
K ++ EM + + D ++ E + K ++ E E E EE E S C D E L
Sbjct: 140 KMELQEMQLKEAKHIAEDSDRKYEEVARKLVILEGELERSEERAEVAESKCG--DLEEEL 197
Query: 96 QEITDNLTKKEIQIEKIHLDTSSFVEEL 123
+ +T+NL E Q +K + EE+
Sbjct: 198 KIVTNNLKSLEAQADKYSTKEDKYEEEI 225
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 33.9 bits (76), Expect = 0.14
Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 19/92 (20%)
Query: 6 EDLKGPGQRCENEPLLDPVGPEPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEK 65
++L GPG E L G P + G G E +E LLE
Sbjct: 190 DELGGPGGVTHPEERLGVAGGPGSAPAAGGGTGT----------------EDDEEELLED 233
Query: 66 RLVAEEEEDEEEVEEDGPSSCSEDDYSELLQE 97
E+E++EEE+ ED EDD LL+E
Sbjct: 234 E---EDEDEEEELLEDDEEELLEDDARALLKE 262
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 33.9 bits (76), Expect = 0.14
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 16 ENEPLLDPVGPEPLGPESQSGKGDMVEMATRF------GSTLQLDLEKGKESLLEKRLVA 69
E E PV PE +G D MA+ G+ + +++++ E E+
Sbjct: 482 EKEETPPPVEPEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEE 541
Query: 70 EE-EEDEEEVEEDGPSSCSEDD 90
EE EE EEE EE+G S SE D
Sbjct: 542 EEDEESEEEEEEEGESEGSEGD 563
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 33.5 bits (75), Expect = 0.18
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 22 DPVGPEPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKRLVAEEEEDEEEVEED 81
+P+ P PL P S + + + ++ S E ES E+ EEE++E+E EE+
Sbjct: 456 EPLEPGPL-PVSTAMPPGLAKSSSESSSE-----ESSSESSSEEE---EEEDEEDEEEEE 506
Query: 82 GPSSCSEDDYSELLQEITDNL 102
SS SE++ + L E+ + L
Sbjct: 507 SESSDSEEERAHRLAELQEQL 527
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 33.5 bits (75), Expect = 0.18
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 22 DPVGPEPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKRLVAEEEEDEEEVEED 81
+P+ P PL P S + + + ++ S E ES E+ EEE++E+E EE+
Sbjct: 456 EPLEPGPL-PVSTAMPPGLAKSSSESSSE-----ESSSESSSEEE---EEEDEEDEEEEE 506
Query: 82 GPSSCSEDDYSELLQEITDNL 102
SS SE++ + L E+ + L
Sbjct: 507 SESSDSEEERAHRLAELQEQL 527
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 33.1 bits (74), Expect = 0.24
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 39 DMVEMATRFGSTL---QLDLEKGKESLLEKRLVAEEEEDEEEVEEDGPSSCSEDDYSELL 95
++VE+ T L L+ +ES +K +++ EEEDEEE EE+ E++ E
Sbjct: 223 EVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEE 282
Query: 96 QEITDNLTKKEIQIEK 111
+E + ++E + E+
Sbjct: 283 EEEEEEEEEEEEEEEE 298
Score = 28.1 bits (61), Expect = 7.7
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 55 LEKGKESLLEKRLVAEEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEKIHL 114
L +E E+ EEEEDEEE EE+ E++ E +E + ++E + I
Sbjct: 255 LSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQ 314
Query: 115 DTSS 118
+ +S
Sbjct: 315 EDTS 318
>gi|207113199 erythrocyte membrane protein band 4.1-like 2 isoform b
[Homo sapiens]
Length = 673
Score = 33.1 bits (74), Expect = 0.24
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 12/122 (9%)
Query: 7 DLKGPGQRCENEPLLDPVGPEPLGPESQSGKGDMVEMATRFGS-TLQLDLEKGKESLLEK 65
D K P Q E +LD EPL E + KGD EMA + +++ EK S EK
Sbjct: 98 DKKEPTQAVVEEQVLDK--EEPLPEEQRQAKGDAEEMAQKKQEIKVEVKEEKPSVSKEEK 155
Query: 66 RLVAEEE---------EDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDT 116
V++ E E EE+V+E +E+ N K E +K+ T
Sbjct: 156 PSVSKVEMQPTELVSKEREEKVKETQEDKLEGGAAKRETKEVQTNELKAEKASQKVTKKT 215
Query: 117 SS 118
+
Sbjct: 216 KT 217
>gi|207113195 erythrocyte membrane protein band 4.1-like 2 isoform b
[Homo sapiens]
Length = 673
Score = 33.1 bits (74), Expect = 0.24
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 12/122 (9%)
Query: 7 DLKGPGQRCENEPLLDPVGPEPLGPESQSGKGDMVEMATRFGS-TLQLDLEKGKESLLEK 65
D K P Q E +LD EPL E + KGD EMA + +++ EK S EK
Sbjct: 98 DKKEPTQAVVEEQVLDK--EEPLPEEQRQAKGDAEEMAQKKQEIKVEVKEEKPSVSKEEK 155
Query: 66 RLVAEEE---------EDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDT 116
V++ E E EE+V+E +E+ N K E +K+ T
Sbjct: 156 PSVSKVEMQPTELVSKEREEKVKETQEDKLEGGAAKRETKEVQTNELKAEKASQKVTKKT 215
Query: 117 SS 118
+
Sbjct: 216 KT 217
>gi|4503579 erythrocyte membrane protein band 4.1-like 2 isoform a
[Homo sapiens]
Length = 1005
Score = 33.1 bits (74), Expect = 0.24
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 12/122 (9%)
Query: 7 DLKGPGQRCENEPLLDPVGPEPLGPESQSGKGDMVEMATRFGS-TLQLDLEKGKESLLEK 65
D K P Q E +LD EPL E + KGD EMA + +++ EK S EK
Sbjct: 98 DKKEPTQAVVEEQVLDK--EEPLPEEQRQAKGDAEEMAQKKQEIKVEVKEEKPSVSKEEK 155
Query: 66 RLVAEEE---------EDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDT 116
V++ E E EE+V+E +E+ N K E +K+ T
Sbjct: 156 PSVSKVEMQPTELVSKEREEKVKETQEDKLEGGAAKRETKEVQTNELKAEKASQKVTKKT 215
Query: 117 SS 118
+
Sbjct: 216 KT 217
>gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo sapiens]
Length = 598
Score = 33.1 bits (74), Expect = 0.24
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Query: 21 LDPVGPEPL------GPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKRLVAEEEED 74
L PV E L GPE ++ + D + + R G ++ L + + L +RL +E+D
Sbjct: 303 LAPVASERLPPQQSGGPEVETKRKDSI-LPERIGERPKITLLQSSKDRLRRRL---KEKD 358
Query: 75 EEEVEEDGPSSCSEDDYSELLQEITDNL----TKKEIQIEKIHLDTSSFVEELPGE 126
E VE P D E+L + +N TK +E+ T+S EE+ GE
Sbjct: 359 EVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNS--EEMLGE 412
>gi|210147567 hypothetical protein LOC220081 [Homo sapiens]
Length = 696
Score = 33.1 bits (74), Expect = 0.24
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 27 EPLGPESQSGKGDMVEMATRFGSTLQLDLEK--GKESLLEKRLVAEEEED---EEEVEED 81
E LG E K D +E G L+ E+ GK+S LE+ E+EE+ EE +E++
Sbjct: 138 EYLGKEGYLEKEDYIEEVDYLGKKAYLEEEEYLGKKSYLEEEKALEKEENLEEEEALEKE 197
Query: 82 GPSSCSEDDYSELLQE 97
E+ Y + L+E
Sbjct: 198 ENLDGKENLYKKYLKE 213
Score = 28.1 bits (61), Expect = 7.7
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 11/148 (7%)
Query: 12 GQRCENEPLLDPVGPEPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKRLVAEE 71
G+ E++ L+ E L E GK + ++ G L+ +E LEK EE
Sbjct: 53 GESLEDKEYLEE--EEDLEEEEYLGKEEYLKEEEYLGKEEHLE----EEEYLEKAGYLEE 106
Query: 72 EEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFVEELP--GEKDL 129
EE EE E G E++ E L + ++L ++E ++ +L+ ++EE+ G+K
Sbjct: 107 EEYIEEEEYLGKEGYLEEE--EYLGK-EEHLEEEEYLGKEGYLEKEDYIEEVDYLGKKAY 163
Query: 130 AHVVEIYDFEPALKTEDLLATFSEFQEK 157
E + L+ E L +E+
Sbjct: 164 LEEEEYLGKKSYLEEEKALEKEENLEEE 191
>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]
Length = 170
Score = 33.1 bits (74), Expect = 0.24
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 11 PGQRCENEPLLDPVGPEPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKRLVAE 70
P + C EP P GPE P +G G++ E A D E+ + A
Sbjct: 56 PSRPCAPEPAASPAGPEE--PGEPAGLGELGEPAGPGEPEGPGDPAAAPAEAEEQAVEAR 113
Query: 71 EEEDEEEVEEDGPSS 85
+EE+++ E GPSS
Sbjct: 114 QEEEQDLDGEKGPSS 128
>gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens]
Length = 177
Score = 33.1 bits (74), Expect = 0.24
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 11 PGQRCENEPLLDPVGPEPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKRLVAE 70
P + C EP P GPE P +G G++ E A D E+ + A
Sbjct: 56 PSRPCAPEPAASPAGPEE--PGEPAGLGELGEPAGPGEPEGPGDPAAAPAEAEEQAVEAR 113
Query: 71 EEEDEEEVEEDGPSS 85
+EE+++ E GPSS
Sbjct: 114 QEEEQDLDGEKGPSS 128
>gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens]
Length = 204
Score = 33.1 bits (74), Expect = 0.24
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 11 PGQRCENEPLLDPVGPEPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKRLVAE 70
P + C EP P GPE P +G G++ E A D E+ + A
Sbjct: 56 PSRPCAPEPAASPAGPEE--PGEPAGLGELGEPAGPGEPEGPGDPAAAPAEAEEQAVEAR 113
Query: 71 EEEDEEEVEEDGPSS 85
+EE+++ E GPSS
Sbjct: 114 QEEEQDLDGEKGPSS 128
>gi|224589071 BMS1-like, ribosome assembly protein [Homo sapiens]
Length = 1282
Score = 32.7 bits (73), Expect = 0.31
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 27 EPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKRLVAEE--------EEDEEEV 78
+PLG E +G M+ + Q+DL G+ + K + +E EED+E
Sbjct: 399 KPLGSEDIDNQGLMMPKEEK-----QMDLNTGR--MRRKAIFGDEDESGDSDDEEDDEMS 451
Query: 79 EEDGPSSCSEDDYSELLQ--EITDN-LTKKEIQIEKIHLDTSSFVEELPGEKD 128
E+DG + S D+ +E + E+TD + K I+ K+ L+ S + +LP D
Sbjct: 452 EDDGLENGSSDEEAEEEENAEMTDQYMAVKGIKRRKLELEEDSEM-DLPAFAD 503
>gi|20143946 potassium channel, subfamily K, member 10 isoform 3
[Homo sapiens]
Length = 543
Score = 32.7 bits (73), Expect = 0.31
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 25 GPEPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKRLVAEEEE----------D 74
GPE L Q D + +FGST +L K K+ L+K L + ++ D
Sbjct: 432 GPEQLNKHGQGASEDNI--INKFGSTSRLTKRKNKD--LKKTLPEDVQKIYKTFRNYSLD 487
Query: 75 EEEVEEDGPSSCSEDDYSELLQEITDNLTK-KEIQIEKIHLDT 116
EE+ EE+ C+ D+ S + +TD + + E++ I DT
Sbjct: 488 EEKKEEETEKMCNSDNSSTAM--LTDCIQQHAELENGMIPTDT 528
>gi|20143944 potassium channel, subfamily K, member 10 isoform 2
[Homo sapiens]
Length = 543
Score = 32.7 bits (73), Expect = 0.31
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 25 GPEPLGPESQSGKGDMVEMATRFGSTLQLDLEKGKESLLEKRLVAEEEE----------D 74
GPE L Q D + +FGST +L K K+ L+K L + ++ D
Sbjct: 432 GPEQLNKHGQGASEDNI--INKFGSTSRLTKRKNKD--LKKTLPEDVQKIYKTFRNYSLD 487
Query: 75 EEEVEEDGPSSCSEDDYSELLQEITDNLTK-KEIQIEKIHLDT 116
EE+ EE+ C+ D+ S + +TD + + E++ I DT
Sbjct: 488 EEKKEEETEKMCNSDNSSTAM--LTDCIQQHAELENGMIPTDT 528
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.132 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,781,760
Number of Sequences: 37866
Number of extensions: 534370
Number of successful extensions: 6554
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 182
Number of HSP's that attempted gapping in prelim test: 4823
Number of HSP's gapped (non-prelim): 1145
length of query: 253
length of database: 18,247,518
effective HSP length: 100
effective length of query: 153
effective length of database: 14,460,918
effective search space: 2212520454
effective search space used: 2212520454
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.