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Search of human proteins with 209862845
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 1 [Homo sapiens]
(964 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c... 2006 0.0
gi|27886563 nuclear factor of activated T-cells, cytoplasmic, ca... 1832 0.0
gi|27886561 nuclear factor of activated T-cells, cytoplasmic, ca... 591 e-168
gi|27886559 nuclear factor of activated T-cells, cytoplasmic, ca... 591 e-168
gi|27886555 nuclear factor of activated T-cells, cytoplasmic, ca... 591 e-168
gi|4758804 nuclear factor of activated T-cells, cytoplasmic, cal... 591 e-168
gi|27502386 nuclear factor of activated T-cells, cytosolic compo... 436 e-122
gi|27886539 nuclear factor of activated T-cells, cytoplasmic, ca... 430 e-120
gi|27886541 nuclear factor of activated T-cells, cytoplasmic, ca... 430 e-120
gi|27502391 nuclear factor of activated T-cells, cytosolic compo... 429 e-120
gi|19923350 nuclear factor of activated T-cells, cytosolic compo... 427 e-119
gi|209862843 nuclear factor of activated T-cells, cytoplasmic, c... 426 e-119
gi|27502393 nuclear factor of activated T-cells, cytosolic compo... 414 e-115
gi|27502388 nuclear factor of activated T-cells, cytosolic compo... 304 3e-82
gi|27886520 nuclear factor of activated T-cells 5 isoform a [Hom... 196 7e-50
gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo... 196 7e-50
gi|164419746 nuclear factor of activated T-cells 5 isoform d [Ho... 196 7e-50
gi|164419744 nuclear factor of activated T-cells 5 isoform b [Ho... 196 7e-50
gi|27886524 nuclear factor of activated T-cells 5 isoform a [Hom... 196 7e-50
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 70 9e-12
gi|110832843 TBP-associated factor 4 [Homo sapiens] 69 3e-11
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 68 5e-11
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 65 2e-10
gi|163965366 nascent polypeptide-associated complex alpha subuni... 65 4e-10
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 64 7e-10
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 64 9e-10
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 63 1e-09
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 63 1e-09
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 63 1e-09
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 62 2e-09
>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 1 [Homo sapiens]
Length = 964
Score = 2006 bits (5196), Expect = 0.0
Identities = 964/964 (100%), Positives = 964/964 (100%)
Query: 1 MITTLPSLLPASLASISHRVTNLPSNSLSHNPGLSKPDFPGNSSPGLPSSSSPGRDLGAP 60
MITTLPSLLPASLASISHRVTNLPSNSLSHNPGLSKPDFPGNSSPGLPSSSSPGRDLGAP
Sbjct: 1 MITTLPSLLPASLASISHRVTNLPSNSLSHNPGLSKPDFPGNSSPGLPSSSSPGRDLGAP 60
Query: 61 AGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEPPPYGAA 120
AGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEPPPYGAA
Sbjct: 61 AGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEPPPYGAA 120
Query: 121 PIGIPRPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIR 180
PIGIPRPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIR
Sbjct: 121 PIGIPRPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIR 180
Query: 181 ITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLS 240
ITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLS
Sbjct: 181 ITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLS 240
Query: 241 SWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPS 300
SWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPS
Sbjct: 241 SWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPS 300
Query: 301 PGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEP 360
PGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEP
Sbjct: 301 PGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEP 360
Query: 361 PPPPPLPLARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLG 420
PPPPPLPLARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLG
Sbjct: 361 PPPPPLPLARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLG 420
Query: 421 AEESVAPPGGSRKEVAGMDYLAVPSPLAWSKARIGGHSPIFRTSALPPLDWPLPSQYEQL 480
AEESVAPPGGSRKEVAGMDYLAVPSPLAWSKARIGGHSPIFRTSALPPLDWPLPSQYEQL
Sbjct: 421 AEESVAPPGGSRKEVAGMDYLAVPSPLAWSKARIGGHSPIFRTSALPPLDWPLPSQYEQL 480
Query: 481 ELRIEVQPRAHHRAHYETEGSRGAVKAAPGGHPVVKLLGYSEKPLTLQMFIGTADERNLR 540
ELRIEVQPRAHHRAHYETEGSRGAVKAAPGGHPVVKLLGYSEKPLTLQMFIGTADERNLR
Sbjct: 481 ELRIEVQPRAHHRAHYETEGSRGAVKAAPGGHPVVKLLGYSEKPLTLQMFIGTADERNLR 540
Query: 541 PHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANIDCAGILKLRNSDIELR 600
PHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANIDCAGILKLRNSDIELR
Sbjct: 541 PHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANIDCAGILKLRNSDIELR 600
Query: 601 KGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQELPQVEAYSPSACS 660
KGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQELPQVEAYSPSACS
Sbjct: 601 KGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQELPQVEAYSPSACS 660
Query: 661 VRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEYSNKR 720
VRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEYSNKR
Sbjct: 661 VRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEYSNKR 720
Query: 721 VSRPVQVYFYVSNGRRKRSPTQSFRFLPVICKEEPLPDSSLRGFPSASATPFGTDMDFSP 780
VSRPVQVYFYVSNGRRKRSPTQSFRFLPVICKEEPLPDSSLRGFPSASATPFGTDMDFSP
Sbjct: 721 VSRPVQVYFYVSNGRRKRSPTQSFRFLPVICKEEPLPDSSLRGFPSASATPFGTDMDFSP 780
Query: 781 PRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMFPETRGTTGCAQP 840
PRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMFPETRGTTGCAQP
Sbjct: 781 PRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMFPETRGTTGCAQP 840
Query: 841 PAVSFLPRPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSDVHPLPA 900
PAVSFLPRPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSDVHPLPA
Sbjct: 841 PAVSFLPRPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSDVHPLPA 900
Query: 901 EGYNKVGPGYGPGEGAPEQEKSRGGYSSGFRDSVPIQGITLEEGGCGTGGCECECVQEIA 960
EGYNKVGPGYGPGEGAPEQEKSRGGYSSGFRDSVPIQGITLEEGGCGTGGCECECVQEIA
Sbjct: 901 EGYNKVGPGYGPGEGAPEQEKSRGGYSSGFRDSVPIQGITLEEGGCGTGGCECECVQEIA 960
Query: 961 LHVC 964
LHVC
Sbjct: 961 LHVC 964
>gi|27886563 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 2 [Homo sapiens]
Length = 902
Score = 1832 bits (4745), Expect = 0.0
Identities = 880/880 (100%), Positives = 880/880 (100%)
Query: 64 MGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEPPPYGAAPIG 123
MGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEPPPYGAAPIG
Sbjct: 1 MGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEPPPYGAAPIG 60
Query: 124 IPRPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIRITS 183
IPRPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIRITS
Sbjct: 61 IPRPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIRITS 120
Query: 184 ISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWS 243
ISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWS
Sbjct: 121 ISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWS 180
Query: 244 FFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGG 303
FFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGG
Sbjct: 181 FFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGG 240
Query: 304 RGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPP 363
RGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPP
Sbjct: 241 RGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPP 300
Query: 364 PPLPLARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEE 423
PPLPLARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEE
Sbjct: 301 PPLPLARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEE 360
Query: 424 SVAPPGGSRKEVAGMDYLAVPSPLAWSKARIGGHSPIFRTSALPPLDWPLPSQYEQLELR 483
SVAPPGGSRKEVAGMDYLAVPSPLAWSKARIGGHSPIFRTSALPPLDWPLPSQYEQLELR
Sbjct: 361 SVAPPGGSRKEVAGMDYLAVPSPLAWSKARIGGHSPIFRTSALPPLDWPLPSQYEQLELR 420
Query: 484 IEVQPRAHHRAHYETEGSRGAVKAAPGGHPVVKLLGYSEKPLTLQMFIGTADERNLRPHA 543
IEVQPRAHHRAHYETEGSRGAVKAAPGGHPVVKLLGYSEKPLTLQMFIGTADERNLRPHA
Sbjct: 421 IEVQPRAHHRAHYETEGSRGAVKAAPGGHPVVKLLGYSEKPLTLQMFIGTADERNLRPHA 480
Query: 544 FYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANIDCAGILKLRNSDIELRKGE 603
FYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANIDCAGILKLRNSDIELRKGE
Sbjct: 481 FYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANIDCAGILKLRNSDIELRKGE 540
Query: 604 TDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQELPQVEAYSPSACSVRG 663
TDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQELPQVEAYSPSACSVRG
Sbjct: 541 TDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQELPQVEAYSPSACSVRG 600
Query: 664 GEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEYSNKRVSR 723
GEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEYSNKRVSR
Sbjct: 601 GEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEYSNKRVSR 660
Query: 724 PVQVYFYVSNGRRKRSPTQSFRFLPVICKEEPLPDSSLRGFPSASATPFGTDMDFSPPRP 783
PVQVYFYVSNGRRKRSPTQSFRFLPVICKEEPLPDSSLRGFPSASATPFGTDMDFSPPRP
Sbjct: 661 PVQVYFYVSNGRRKRSPTQSFRFLPVICKEEPLPDSSLRGFPSASATPFGTDMDFSPPRP 720
Query: 784 PYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMFPETRGTTGCAQPPAV 843
PYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMFPETRGTTGCAQPPAV
Sbjct: 721 PYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMFPETRGTTGCAQPPAV 780
Query: 844 SFLPRPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSDVHPLPAEGY 903
SFLPRPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSDVHPLPAEGY
Sbjct: 781 SFLPRPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSDVHPLPAEGY 840
Query: 904 NKVGPGYGPGEGAPEQEKSRGGYSSGFRDSVPIQGITLEE 943
NKVGPGYGPGEGAPEQEKSRGGYSSGFRDSVPIQGITLEE
Sbjct: 841 NKVGPGYGPGEGAPEQEKSRGGYSSGFRDSVPIQGITLEE 880
>gi|27886561 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 1 [Homo sapiens]
Length = 1075
Score = 591 bits (1523), Expect = e-168
Identities = 368/783 (46%), Positives = 454/783 (57%), Gaps = 99/783 (12%)
Query: 64 MGAASC-EDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEPPPYGAAPI 122
M A+C +EL+FKLVFGE+ P G +L+ +D + PP P+
Sbjct: 1 MTTANCGAHDELDFKLVFGEDGAPAPPPPGSRPADLEPDDCASIYIFNVDPPPSTLTTPL 60
Query: 123 GIPRPPPPRPGMHSPPPRPAPS----PGTWESQPARSVRLGGPGGGAGGAGGGRVLECPS 178
+P P P S GT E ++ LGGP + ECPS
Sbjct: 61 CLPHHGLPSHSSVLSPSFQLQSHKNYEGTCEIPESKYSPLGGP----------KPFECPS 110
Query: 179 IRITSISPT-------PEPPAALEDNPDAWGDGSPRD--YPPPEGFGGYREAGGQGGGAF 229
I+ITSISP E + D + + RD Y P E YRE+
Sbjct: 111 IQITSISPNCHQELDAHEDDLQINDPEREFLERPSRDHLYLPLEP--SYRESS------- 161
Query: 230 FSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWT 289
SPSP +SS+SS S+FSDAS +L D+V+SELNEAA+RF LGSPL SP SP
Sbjct: 162 LSPSP-ASSISSRSWFSDASSCESLSHIYDDVDSELNEAAARFTLGSPLTSPGGSPGGCP 220
Query: 290 PEDPW-SLYG------------PSPGGRGPEDSWLLLSAPGPTPAS---PRPASPCGKRR 333
E+ W YG SP +++WL P PAS RP SPCGKRR
Sbjct: 221 GEETWHQQYGLGHSLSPRQSPCHSPRSSVTDENWL-----SPRPASGPSSRPTSPCGKRR 275
Query: 334 YSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPL----------ARDPGSPG------P 377
+SS+ + GSL S P P P A G G P
Sbjct: 276 HSSA--------EVCYAGSLSPHHSPVPSPGHSPRGSVTEDTWLNASVHGGSGLGPAVFP 327
Query: 378 FDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCN-GKLPLGAEESVAPPGGS----R 432
F Y IP KTR+TS +QA LP E S + G L E S+ GS +
Sbjct: 328 FQYC---VETDIPLKTRKTSEDQAAILPGKLELCSDDQGSLSPARETSIDDGLGSQYPLK 384
Query: 433 KEVAGMDYLAVPSPLAWSKARIGGHSPIFRTSALPPLDWPLPSQYEQLELRIEVQPRAHH 492
K+ G +L+VPSP WSK + GH+PIFRTS+LPPLDWPLP+ + Q EL+IEVQP+ HH
Sbjct: 385 KDSCGDQFLSVPSPFTWSKPK-PGHTPIFRTSSLPPLDWPLPAHFGQCELKIEVQPKTHH 443
Query: 493 RAHYETEGSRGAVKAAPGGHPVVKLLGYSEKPLTLQMFIGTADERNLRPHAFYQVHRITG 552
RAHYETEGSRGAVKA+ GGHPVVKLLGY+EKP+ LQMFIGTAD+R LRPHAFYQVHRITG
Sbjct: 444 RAHYETEGSRGAVKASTGGHPVVKLLGYNEKPINLQMFIGTADDRYLRPHAFYQVHRITG 503
Query: 553 KMVATASYEAVVSGTKVLEMTLLPENNMAANIDCAGILKLRNSDIELRKGETDIGRKNTR 612
K VATAS E +++ TKVLE+ LLPENNM+A+IDCAGILKLRNSDIELRKGETDIGRKNTR
Sbjct: 504 KTVATASQEIIIASTKVLEIPLLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTR 563
Query: 613 VRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQELPQVEAYSPSACSVRGGEELVLTGS 672
VRLVFRVH+PQ GKV+S+Q AS+P+ECSQRSAQELP +E YS ++CSV GG E+V+TGS
Sbjct: 564 VRLVFRVHIPQPSGKVLSLQIASIPVECSQRSAQELPHIEKYSINSCSVNGGHEMVVTGS 623
Query: 673 NFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEYSNKRVSRPVQVYFYVS 732
NFLP+SK++F+E+G DG+ QWE E + R + + L VP Y N V+ VQV+FY+
Sbjct: 624 NFLPESKIIFLEKGQDGRPQWEVEGKIIREKCQGAHIVLEVPPYHNPAVTAAVQVHFYLC 683
Query: 733 NGRRKRSPTQSFRFLPVICKEEPLPDSSLRGFPSASATPFGTDMDFSPPRPPYPSYPHED 792
NG+RK+S +Q F + PV+ K+E + L PS P P P D
Sbjct: 684 NGKRKKSQSQRFTYTPVLMKQEHREEIDLSSVPSLPV-----------PHPAQTQRPSSD 732
Query: 793 PAC 795
C
Sbjct: 733 SGC 735
>gi|27886559 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 4 [Homo sapiens]
Length = 1045
Score = 591 bits (1523), Expect = e-168
Identities = 368/783 (46%), Positives = 454/783 (57%), Gaps = 99/783 (12%)
Query: 64 MGAASC-EDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEPPPYGAAPI 122
M A+C +EL+FKLVFGE+ P G +L+ +D + PP P+
Sbjct: 1 MTTANCGAHDELDFKLVFGEDGAPAPPPPGSRPADLEPDDCASIYIFNVDPPPSTLTTPL 60
Query: 123 GIPRPPPPRPGMHSPPPRPAPS----PGTWESQPARSVRLGGPGGGAGGAGGGRVLECPS 178
+P P P S GT E ++ LGGP + ECPS
Sbjct: 61 CLPHHGLPSHSSVLSPSFQLQSHKNYEGTCEIPESKYSPLGGP----------KPFECPS 110
Query: 179 IRITSISPT-------PEPPAALEDNPDAWGDGSPRD--YPPPEGFGGYREAGGQGGGAF 229
I+ITSISP E + D + + RD Y P E YRE+
Sbjct: 111 IQITSISPNCHQELDAHEDDLQINDPEREFLERPSRDHLYLPLEP--SYRESS------- 161
Query: 230 FSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWT 289
SPSP +SS+SS S+FSDAS +L D+V+SELNEAA+RF LGSPL SP SP
Sbjct: 162 LSPSP-ASSISSRSWFSDASSCESLSHIYDDVDSELNEAAARFTLGSPLTSPGGSPGGCP 220
Query: 290 PEDPW-SLYG------------PSPGGRGPEDSWLLLSAPGPTPAS---PRPASPCGKRR 333
E+ W YG SP +++WL P PAS RP SPCGKRR
Sbjct: 221 GEETWHQQYGLGHSLSPRQSPCHSPRSSVTDENWL-----SPRPASGPSSRPTSPCGKRR 275
Query: 334 YSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPL----------ARDPGSPG------P 377
+SS+ + GSL S P P P A G G P
Sbjct: 276 HSSA--------EVCYAGSLSPHHSPVPSPGHSPRGSVTEDTWLNASVHGGSGLGPAVFP 327
Query: 378 FDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCN-GKLPLGAEESVAPPGGS----R 432
F Y IP KTR+TS +QA LP E S + G L E S+ GS +
Sbjct: 328 FQYC---VETDIPLKTRKTSEDQAAILPGKLELCSDDQGSLSPARETSIDDGLGSQYPLK 384
Query: 433 KEVAGMDYLAVPSPLAWSKARIGGHSPIFRTSALPPLDWPLPSQYEQLELRIEVQPRAHH 492
K+ G +L+VPSP WSK + GH+PIFRTS+LPPLDWPLP+ + Q EL+IEVQP+ HH
Sbjct: 385 KDSCGDQFLSVPSPFTWSKPK-PGHTPIFRTSSLPPLDWPLPAHFGQCELKIEVQPKTHH 443
Query: 493 RAHYETEGSRGAVKAAPGGHPVVKLLGYSEKPLTLQMFIGTADERNLRPHAFYQVHRITG 552
RAHYETEGSRGAVKA+ GGHPVVKLLGY+EKP+ LQMFIGTAD+R LRPHAFYQVHRITG
Sbjct: 444 RAHYETEGSRGAVKASTGGHPVVKLLGYNEKPINLQMFIGTADDRYLRPHAFYQVHRITG 503
Query: 553 KMVATASYEAVVSGTKVLEMTLLPENNMAANIDCAGILKLRNSDIELRKGETDIGRKNTR 612
K VATAS E +++ TKVLE+ LLPENNM+A+IDCAGILKLRNSDIELRKGETDIGRKNTR
Sbjct: 504 KTVATASQEIIIASTKVLEIPLLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTR 563
Query: 613 VRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQELPQVEAYSPSACSVRGGEELVLTGS 672
VRLVFRVH+PQ GKV+S+Q AS+P+ECSQRSAQELP +E YS ++CSV GG E+V+TGS
Sbjct: 564 VRLVFRVHIPQPSGKVLSLQIASIPVECSQRSAQELPHIEKYSINSCSVNGGHEMVVTGS 623
Query: 673 NFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEYSNKRVSRPVQVYFYVS 732
NFLP+SK++F+E+G DG+ QWE E + R + + L VP Y N V+ VQV+FY+
Sbjct: 624 NFLPESKIIFLEKGQDGRPQWEVEGKIIREKCQGAHIVLEVPPYHNPAVTAAVQVHFYLC 683
Query: 733 NGRRKRSPTQSFRFLPVICKEEPLPDSSLRGFPSASATPFGTDMDFSPPRPPYPSYPHED 792
NG+RK+S +Q F + PV+ K+E + L PS P P P D
Sbjct: 684 NGKRKKSQSQRFTYTPVLMKQEHREEIDLSSVPSLPV-----------PHPAQTQRPSSD 732
Query: 793 PAC 795
C
Sbjct: 733 SGC 735
>gi|27886555 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 3 [Homo sapiens]
Length = 1065
Score = 591 bits (1523), Expect = e-168
Identities = 368/783 (46%), Positives = 454/783 (57%), Gaps = 99/783 (12%)
Query: 64 MGAASC-EDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEPPPYGAAPI 122
M A+C +EL+FKLVFGE+ P G +L+ +D + PP P+
Sbjct: 1 MTTANCGAHDELDFKLVFGEDGAPAPPPPGSRPADLEPDDCASIYIFNVDPPPSTLTTPL 60
Query: 123 GIPRPPPPRPGMHSPPPRPAPS----PGTWESQPARSVRLGGPGGGAGGAGGGRVLECPS 178
+P P P S GT E ++ LGGP + ECPS
Sbjct: 61 CLPHHGLPSHSSVLSPSFQLQSHKNYEGTCEIPESKYSPLGGP----------KPFECPS 110
Query: 179 IRITSISPT-------PEPPAALEDNPDAWGDGSPRD--YPPPEGFGGYREAGGQGGGAF 229
I+ITSISP E + D + + RD Y P E YRE+
Sbjct: 111 IQITSISPNCHQELDAHEDDLQINDPEREFLERPSRDHLYLPLEP--SYRESS------- 161
Query: 230 FSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWT 289
SPSP +SS+SS S+FSDAS +L D+V+SELNEAA+RF LGSPL SP SP
Sbjct: 162 LSPSP-ASSISSRSWFSDASSCESLSHIYDDVDSELNEAAARFTLGSPLTSPGGSPGGCP 220
Query: 290 PEDPW-SLYG------------PSPGGRGPEDSWLLLSAPGPTPAS---PRPASPCGKRR 333
E+ W YG SP +++WL P PAS RP SPCGKRR
Sbjct: 221 GEETWHQQYGLGHSLSPRQSPCHSPRSSVTDENWL-----SPRPASGPSSRPTSPCGKRR 275
Query: 334 YSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPL----------ARDPGSPG------P 377
+SS+ + GSL S P P P A G G P
Sbjct: 276 HSSA--------EVCYAGSLSPHHSPVPSPGHSPRGSVTEDTWLNASVHGGSGLGPAVFP 327
Query: 378 FDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCN-GKLPLGAEESVAPPGGS----R 432
F Y IP KTR+TS +QA LP E S + G L E S+ GS +
Sbjct: 328 FQYC---VETDIPLKTRKTSEDQAAILPGKLELCSDDQGSLSPARETSIDDGLGSQYPLK 384
Query: 433 KEVAGMDYLAVPSPLAWSKARIGGHSPIFRTSALPPLDWPLPSQYEQLELRIEVQPRAHH 492
K+ G +L+VPSP WSK + GH+PIFRTS+LPPLDWPLP+ + Q EL+IEVQP+ HH
Sbjct: 385 KDSCGDQFLSVPSPFTWSKPK-PGHTPIFRTSSLPPLDWPLPAHFGQCELKIEVQPKTHH 443
Query: 493 RAHYETEGSRGAVKAAPGGHPVVKLLGYSEKPLTLQMFIGTADERNLRPHAFYQVHRITG 552
RAHYETEGSRGAVKA+ GGHPVVKLLGY+EKP+ LQMFIGTAD+R LRPHAFYQVHRITG
Sbjct: 444 RAHYETEGSRGAVKASTGGHPVVKLLGYNEKPINLQMFIGTADDRYLRPHAFYQVHRITG 503
Query: 553 KMVATASYEAVVSGTKVLEMTLLPENNMAANIDCAGILKLRNSDIELRKGETDIGRKNTR 612
K VATAS E +++ TKVLE+ LLPENNM+A+IDCAGILKLRNSDIELRKGETDIGRKNTR
Sbjct: 504 KTVATASQEIIIASTKVLEIPLLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTR 563
Query: 613 VRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQELPQVEAYSPSACSVRGGEELVLTGS 672
VRLVFRVH+PQ GKV+S+Q AS+P+ECSQRSAQELP +E YS ++CSV GG E+V+TGS
Sbjct: 564 VRLVFRVHIPQPSGKVLSLQIASIPVECSQRSAQELPHIEKYSINSCSVNGGHEMVVTGS 623
Query: 673 NFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEYSNKRVSRPVQVYFYVS 732
NFLP+SK++F+E+G DG+ QWE E + R + + L VP Y N V+ VQV+FY+
Sbjct: 624 NFLPESKIIFLEKGQDGRPQWEVEGKIIREKCQGAHIVLEVPPYHNPAVTAAVQVHFYLC 683
Query: 733 NGRRKRSPTQSFRFLPVICKEEPLPDSSLRGFPSASATPFGTDMDFSPPRPPYPSYPHED 792
NG+RK+S +Q F + PV+ K+E + L PS P P P D
Sbjct: 684 NGKRKKSQSQRFTYTPVLMKQEHREEIDLSSVPSLPV-----------PHPAQTQRPSSD 732
Query: 793 PAC 795
C
Sbjct: 733 SGC 735
>gi|4758804 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 2 [Homo sapiens]
Length = 1068
Score = 591 bits (1523), Expect = e-168
Identities = 368/783 (46%), Positives = 454/783 (57%), Gaps = 99/783 (12%)
Query: 64 MGAASC-EDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEPPPYGAAPI 122
M A+C +EL+FKLVFGE+ P G +L+ +D + PP P+
Sbjct: 1 MTTANCGAHDELDFKLVFGEDGAPAPPPPGSRPADLEPDDCASIYIFNVDPPPSTLTTPL 60
Query: 123 GIPRPPPPRPGMHSPPPRPAPS----PGTWESQPARSVRLGGPGGGAGGAGGGRVLECPS 178
+P P P S GT E ++ LGGP + ECPS
Sbjct: 61 CLPHHGLPSHSSVLSPSFQLQSHKNYEGTCEIPESKYSPLGGP----------KPFECPS 110
Query: 179 IRITSISPT-------PEPPAALEDNPDAWGDGSPRD--YPPPEGFGGYREAGGQGGGAF 229
I+ITSISP E + D + + RD Y P E YRE+
Sbjct: 111 IQITSISPNCHQELDAHEDDLQINDPEREFLERPSRDHLYLPLEP--SYRESS------- 161
Query: 230 FSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWT 289
SPSP +SS+SS S+FSDAS +L D+V+SELNEAA+RF LGSPL SP SP
Sbjct: 162 LSPSP-ASSISSRSWFSDASSCESLSHIYDDVDSELNEAAARFTLGSPLTSPGGSPGGCP 220
Query: 290 PEDPW-SLYG------------PSPGGRGPEDSWLLLSAPGPTPAS---PRPASPCGKRR 333
E+ W YG SP +++WL P PAS RP SPCGKRR
Sbjct: 221 GEETWHQQYGLGHSLSPRQSPCHSPRSSVTDENWL-----SPRPASGPSSRPTSPCGKRR 275
Query: 334 YSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPL----------ARDPGSPG------P 377
+SS+ + GSL S P P P A G G P
Sbjct: 276 HSSA--------EVCYAGSLSPHHSPVPSPGHSPRGSVTEDTWLNASVHGGSGLGPAVFP 327
Query: 378 FDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCN-GKLPLGAEESVAPPGGS----R 432
F Y IP KTR+TS +QA LP E S + G L E S+ GS +
Sbjct: 328 FQYC---VETDIPLKTRKTSEDQAAILPGKLELCSDDQGSLSPARETSIDDGLGSQYPLK 384
Query: 433 KEVAGMDYLAVPSPLAWSKARIGGHSPIFRTSALPPLDWPLPSQYEQLELRIEVQPRAHH 492
K+ G +L+VPSP WSK + GH+PIFRTS+LPPLDWPLP+ + Q EL+IEVQP+ HH
Sbjct: 385 KDSCGDQFLSVPSPFTWSKPK-PGHTPIFRTSSLPPLDWPLPAHFGQCELKIEVQPKTHH 443
Query: 493 RAHYETEGSRGAVKAAPGGHPVVKLLGYSEKPLTLQMFIGTADERNLRPHAFYQVHRITG 552
RAHYETEGSRGAVKA+ GGHPVVKLLGY+EKP+ LQMFIGTAD+R LRPHAFYQVHRITG
Sbjct: 444 RAHYETEGSRGAVKASTGGHPVVKLLGYNEKPINLQMFIGTADDRYLRPHAFYQVHRITG 503
Query: 553 KMVATASYEAVVSGTKVLEMTLLPENNMAANIDCAGILKLRNSDIELRKGETDIGRKNTR 612
K VATAS E +++ TKVLE+ LLPENNM+A+IDCAGILKLRNSDIELRKGETDIGRKNTR
Sbjct: 504 KTVATASQEIIIASTKVLEIPLLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTR 563
Query: 613 VRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQELPQVEAYSPSACSVRGGEELVLTGS 672
VRLVFRVH+PQ GKV+S+Q AS+P+ECSQRSAQELP +E YS ++CSV GG E+V+TGS
Sbjct: 564 VRLVFRVHIPQPSGKVLSLQIASIPVECSQRSAQELPHIEKYSINSCSVNGGHEMVVTGS 623
Query: 673 NFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEYSNKRVSRPVQVYFYVS 732
NFLP+SK++F+E+G DG+ QWE E + R + + L VP Y N V+ VQV+FY+
Sbjct: 624 NFLPESKIIFLEKGQDGRPQWEVEGKIIREKCQGAHIVLEVPPYHNPAVTAAVQVHFYLC 683
Query: 733 NGRRKRSPTQSFRFLPVICKEEPLPDSSLRGFPSASATPFGTDMDFSPPRPPYPSYPHED 792
NG+RK+S +Q F + PV+ K+E + L PS P P P D
Sbjct: 684 NGKRKKSQSQRFTYTPVLMKQEHREEIDLSSVPSLPV-----------PHPAQTQRPSSD 732
Query: 793 PAC 795
C
Sbjct: 733 SGC 735
>gi|27502386 nuclear factor of activated T-cells, cytosolic
component 1 isoform C [Homo sapiens]
Length = 930
Score = 436 bits (1121), Expect = e-122
Identities = 347/903 (38%), Positives = 423/903 (46%), Gaps = 158/903 (17%)
Query: 110 ALGEPPPYGAAPIGIPRPPPPRPGMHSPPPRPAPS---------PGTWESQPARSVRLGG 160
A P YG A + P P P HS P P + P + GG
Sbjct: 25 AAAAPEHYGYASSNVS-PALPLPTAHSTLPAPCHNLQTSTPGIIPPADHPSGYGAALDGG 83
Query: 161 PGGGAGGAG-----GGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGF 215
P G +G G LE P I ITS +N + D D P
Sbjct: 84 PAGYFLSSGHTRPDGAPALESPRIEITSCL------GLYHNNNQFFHDVEVEDVLP---- 133
Query: 216 GGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASD-EAALYAACDEVESELNEAASRFGL 274
+ SPS + SL S + D S A + SE + S +
Sbjct: 134 -----------SSKRSPSTATLSLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESNYSY 182
Query: 275 G------SPLPSPRASPRPWTPEDPW-------SLYGP-------SPGGRGPEDSWLLLS 314
SP SP SP+ PE+ + +L G SP E+SWL
Sbjct: 183 PYASPQTSPWQSPCVSPKTTDPEEGFPRGLGACTLLGSPRHSPSTSPRASVTEESWL--- 239
Query: 315 APGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGS 374
S RPASPC KR+YS +G SP S S P P + + D
Sbjct: 240 ----GARSSRPASPCNKRKYSLNGRQPPYSPHHSPTPS-------PHGSPRVSVTDDSWL 288
Query: 375 PGPFDYVGAPPA---------------ESIPQKTRRTSSEQAVALPRSEEPASCN-GKLP 418
Y + + +P K+R+T+ EQ ++ EP + G P
Sbjct: 289 GNTTQYTSSAIVAAINALTTDSSLDLGDGVPVKSRKTTLEQPPSVALKVEPVGEDLGSPP 348
Query: 419 LGAEESVAPPGGS-----RKEVAGMDYLAVPS-PLAWSKARIGGHSPIFRTS----ALPP 468
A+ AP S RK YLAVP P W+K + P+ TS LP
Sbjct: 349 PPAD--FAPEDYSSFQHIRKGGFCDQYLAVPQHPYQWAKPK-----PLSPTSYMSPTLPA 401
Query: 469 LDWPLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVKAAPGGHPVVKLLGYSE-KPLTL 527
LDW LPS ELRIEVQP++HHRAHYETEGSRGAVKA+ GGHP+V+L GY E +PL L
Sbjct: 402 LDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQLHGYLENEPLML 461
Query: 528 QMFIGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANIDCA 587
Q+FIGTAD+R LRPHAFYQVHRITGK V+T S+EA++S TKVLE+ LLPEN+M A IDCA
Sbjct: 462 QLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPLLPENSMRAVIDCA 521
Query: 588 GILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQE 647
GILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQ G+ +S+Q AS PIECSQRSAQE
Sbjct: 522 GILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQVASNPIECSQRSAQE 581
Query: 648 LPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNEV 707
LP VE S + V GG+++VL+G NFL DSKV+F+E+ PDG WE EA +R
Sbjct: 582 LPLVEKQSTDSYPVVGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLCKPN 641
Query: 708 TLTLTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFRFLPV---ICKEEPLPDSSLRGF 764
+L + +P + N+R++ PV V FYV NG+RKRS Q F +LP I K EP D
Sbjct: 642 SLVVEIPPFRNQRITSPVHVSFYVCNGKRKRSQYQRFTYLPANVPIIKTEPTDDYE---- 697
Query: 765 PSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTG----PPPS 820
P+ + P SP PY S P + L GF P PQ P
Sbjct: 698 PAPTCGP--VSQGLSPLPRPYYSQQLAMPPDPSSCLVAGF-----PPCPQRSTLMPAAPG 750
Query: 821 YRPGLRMFPETRGTTGCAQP--------------PAVSFLPRPFPSDPYGGRGSSFSLGL 866
P L T G A P PAV +PRP + P G
Sbjct: 751 VSPKLHDLSPAAYTKGVASPGHCHLGLPQPAGEAPAVQDVPRPVATHP----------GS 800
Query: 867 PFSPPAPFRP-----PPLPASPP-LEGPFPSQSDVHPLPAEGYNKV-----GPGYGPGEG 915
P PP P PP + PP LE S PLP P P G
Sbjct: 801 PGQPPPALLPQQVSAPPSSSCPPGLEHSLCPSSPSPPLPPATQEPTCLQPCSPACPPATG 860
Query: 916 APE 918
P+
Sbjct: 861 RPQ 863
>gi|27886539 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 2 isoform B [Homo sapiens]
Length = 921
Score = 430 bits (1106), Expect = e-120
Identities = 324/781 (41%), Positives = 397/781 (50%), Gaps = 106/781 (13%)
Query: 53 PGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALG 112
P D G G S +DE L+F ++F E P +E+ P ++A
Sbjct: 8 PQPDGGDAPGHEPGGSPQDE-LDFSILFDYEYLNP------------NEEEPNAHKVA-- 52
Query: 113 EPPPYGAAPIGIP----RPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGA 168
PP A P + +P P + PP P P + + P G +G +
Sbjct: 53 SPPSGPAYPDDVLDYGLKPYSPLASLSGEPPGRFGEPD--RVGPQKFLSAAKPAGASGLS 110
Query: 169 GGGRVLECPSIR-ITSISPTPEPPAAL--EDNPDAWGDGSPRDYPPPEGFGGYREAGGQG 225
R+ PS I ++ P A L E P A SPR P GF GYRE
Sbjct: 111 P--RIEITPSHELIQAVGPLRMRDAGLLVEQPPLAGVAASPRFTLPVPGFEGYREP---- 164
Query: 226 GGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASP 285
SP SS SS SF SD SP SP SP
Sbjct: 165 ----LCLSPASSG-SSASFISDTF--------------------------SPYTSPCVSP 193
Query: 286 RPWTPEDPWSLYGPSPGGRGP-------------EDSWLLLSAPGPTPASPRPASPCGKR 332
P+D + P P EDS L +P P PAS R +SP KR
Sbjct: 194 NNGGPDDLCPQFQNIPAHYSPRTSPIMSPRTSLAEDSCLGRHSPVPRPAS-RSSSPGAKR 252
Query: 333 RYSSS----GTPSSASPALSRRGSLGEEGSEPPPPPPLPLARDP--GSPGPFDYVGAPPA 386
R+S + P ASP SR S P P P GS D + +
Sbjct: 253 RHSCAEALVALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYPPVAGSAVIMDALNSLAT 312
Query: 387 ES---IPQKTRRTSSEQAVALPRSEEPASCNGKLP---LGAEESVAP-PGGSRKEVAGMD 439
+S IP K +TS + + P S P+ LP A E + P G R+ A
Sbjct: 313 DSPCGIPPKMWKTSPDPS---PVSAAPSKAG--LPRHIYPAVEFLGPCEQGERRNSAPES 367
Query: 440 YLAVPSPLAWSKARIGGHSPIFR---TSALPPLDWPLPSQYEQLELRIEVQPRAHHRAHY 496
L VP W K + PI T++LPPL+WPL SQ ELRIEVQP+ HHRAHY
Sbjct: 368 ILLVPP--TWPKPLVPA-IPICSIPVTASLPPLEWPLSSQSGSYELRIEVQPKPHHRAHY 424
Query: 497 ETEGSRGAVKAAPGGHPVVKLLGYSE-KPLTLQMFIGTADERNLRPHAFYQVHRITGKMV 555
ETEGSRGAVKA GGHPVV+L GY E KPL LQ+FIGTADER L+PHAFYQVHRITGK V
Sbjct: 425 ETEGSRGAVKAPTGGHPVVQLHGYMENKPLGLQIFIGTADERILKPHAFYQVHRITGKTV 484
Query: 556 ATASYEAVVSGTKVLEMTLLPENNMAANIDCAGILKLRNSDIELRKGETDIGRKNTRVRL 615
T SYE +V TKVLE+ L P+NNM A IDCAGILKLRN+DIELRKGETDIGRKNTRVRL
Sbjct: 485 TTTSYEKIVGNTKVLEIPLEPKNNMRATIDCAGILKLRNADIELRKGETDIGRKNTRVRL 544
Query: 616 VFRVHVPQGGGKVVSVQAASVPIECSQRSAQELPQVEAYSPSACSVRGGEELVLTGSNFL 675
VFRVH+P+ G++VS+Q AS PIECSQRSA ELP VE +C V GG++++LTG NF
Sbjct: 545 VFRVHIPESSGRIVSLQTASNPIECSQRSAHELPMVERQDTDSCLVYGGQQMILTGQNFT 604
Query: 676 PDSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEYSNKRVSRPVQVYFYVSNGR 735
+SKVVF E+ DG+ WE EATV++ +S L + +PEY NK + PV+V FYV NG+
Sbjct: 605 SESKVVFTEKTTDGQQIWEMEATVDKDKSQPNMLFVEIPEYRNKHIRTPVKVNFYVINGK 664
Query: 736 RKRSPTQSFRFLPV-ICKEEPLPDSSLRGFPSASATPFGTDMDFSPPRPPYPSYPHEDPA 794
RKRS Q F + PV K EP + P+ +P + P P +P E P+
Sbjct: 665 RKRSQPQHFTYHPVPAIKTEPTDEYD----PTLICSPTHGGLGSQPYYPQHPMVA-ESPS 719
Query: 795 C 795
C
Sbjct: 720 C 720
>gi|27886541 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 2 isoform C [Homo sapiens]
Length = 925
Score = 430 bits (1106), Expect = e-120
Identities = 324/781 (41%), Positives = 397/781 (50%), Gaps = 106/781 (13%)
Query: 53 PGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALG 112
P D G G S +DE L+F ++F E P +E+ P ++A
Sbjct: 8 PQPDGGDAPGHEPGGSPQDE-LDFSILFDYEYLNP------------NEEEPNAHKVA-- 52
Query: 113 EPPPYGAAPIGIP----RPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGA 168
PP A P + +P P + PP P P + + P G +G +
Sbjct: 53 SPPSGPAYPDDVLDYGLKPYSPLASLSGEPPGRFGEPD--RVGPQKFLSAAKPAGASGLS 110
Query: 169 GGGRVLECPSIR-ITSISPTPEPPAAL--EDNPDAWGDGSPRDYPPPEGFGGYREAGGQG 225
R+ PS I ++ P A L E P A SPR P GF GYRE
Sbjct: 111 P--RIEITPSHELIQAVGPLRMRDAGLLVEQPPLAGVAASPRFTLPVPGFEGYREP---- 164
Query: 226 GGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASP 285
SP SS SS SF SD SP SP SP
Sbjct: 165 ----LCLSPASSG-SSASFISDTF--------------------------SPYTSPCVSP 193
Query: 286 RPWTPEDPWSLYGPSPGGRGP-------------EDSWLLLSAPGPTPASPRPASPCGKR 332
P+D + P P EDS L +P P PAS R +SP KR
Sbjct: 194 NNGGPDDLCPQFQNIPAHYSPRTSPIMSPRTSLAEDSCLGRHSPVPRPAS-RSSSPGAKR 252
Query: 333 RYSSS----GTPSSASPALSRRGSLGEEGSEPPPPPPLPLARDP--GSPGPFDYVGAPPA 386
R+S + P ASP SR S P P P GS D + +
Sbjct: 253 RHSCAEALVALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYPPVAGSAVIMDALNSLAT 312
Query: 387 ES---IPQKTRRTSSEQAVALPRSEEPASCNGKLP---LGAEESVAP-PGGSRKEVAGMD 439
+S IP K +TS + + P S P+ LP A E + P G R+ A
Sbjct: 313 DSPCGIPPKMWKTSPDPS---PVSAAPSKAG--LPRHIYPAVEFLGPCEQGERRNSAPES 367
Query: 440 YLAVPSPLAWSKARIGGHSPIFR---TSALPPLDWPLPSQYEQLELRIEVQPRAHHRAHY 496
L VP W K + PI T++LPPL+WPL SQ ELRIEVQP+ HHRAHY
Sbjct: 368 ILLVPP--TWPKPLVPA-IPICSIPVTASLPPLEWPLSSQSGSYELRIEVQPKPHHRAHY 424
Query: 497 ETEGSRGAVKAAPGGHPVVKLLGYSE-KPLTLQMFIGTADERNLRPHAFYQVHRITGKMV 555
ETEGSRGAVKA GGHPVV+L GY E KPL LQ+FIGTADER L+PHAFYQVHRITGK V
Sbjct: 425 ETEGSRGAVKAPTGGHPVVQLHGYMENKPLGLQIFIGTADERILKPHAFYQVHRITGKTV 484
Query: 556 ATASYEAVVSGTKVLEMTLLPENNMAANIDCAGILKLRNSDIELRKGETDIGRKNTRVRL 615
T SYE +V TKVLE+ L P+NNM A IDCAGILKLRN+DIELRKGETDIGRKNTRVRL
Sbjct: 485 TTTSYEKIVGNTKVLEIPLEPKNNMRATIDCAGILKLRNADIELRKGETDIGRKNTRVRL 544
Query: 616 VFRVHVPQGGGKVVSVQAASVPIECSQRSAQELPQVEAYSPSACSVRGGEELVLTGSNFL 675
VFRVH+P+ G++VS+Q AS PIECSQRSA ELP VE +C V GG++++LTG NF
Sbjct: 545 VFRVHIPESSGRIVSLQTASNPIECSQRSAHELPMVERQDTDSCLVYGGQQMILTGQNFT 604
Query: 676 PDSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEYSNKRVSRPVQVYFYVSNGR 735
+SKVVF E+ DG+ WE EATV++ +S L + +PEY NK + PV+V FYV NG+
Sbjct: 605 SESKVVFTEKTTDGQQIWEMEATVDKDKSQPNMLFVEIPEYRNKHIRTPVKVNFYVINGK 664
Query: 736 RKRSPTQSFRFLPV-ICKEEPLPDSSLRGFPSASATPFGTDMDFSPPRPPYPSYPHEDPA 794
RKRS Q F + PV K EP + P+ +P + P P +P E P+
Sbjct: 665 RKRSQPQHFTYHPVPAIKTEPTDEYD----PTLICSPTHGGLGSQPYYPQHPMVA-ESPS 719
Query: 795 C 795
C
Sbjct: 720 C 720
>gi|27502391 nuclear factor of activated T-cells, cytosolic
component 1 isoform E [Homo sapiens]
Length = 812
Score = 429 bits (1104), Expect = e-120
Identities = 333/850 (39%), Positives = 407/850 (47%), Gaps = 147/850 (17%)
Query: 110 ALGEPPPYGAAPIGIPRPPPPRPGMHSPPPRPAPS---------PGTWESQPARSVRLGG 160
A P YG A + P P P HS P P + P + GG
Sbjct: 25 AAAAPEHYGYASSNVS-PALPLPTAHSTLPAPCHNLQTSTPGIIPPADHPSGYGAALDGG 83
Query: 161 PGGGAGGAG-----GGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGF 215
P G +G G LE P I ITS +N + D D P
Sbjct: 84 PAGYFLSSGHTRPDGAPALESPRIEITSCL------GLYHNNNQFFHDVEVEDVLP---- 133
Query: 216 GGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASD-EAALYAACDEVESELNEAASRFGL 274
+ SPS + SL S + D S A + SE + S +
Sbjct: 134 -----------SSKRSPSTATLSLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESNYSY 182
Query: 275 G------SPLPSPRASPRPWTPEDPW-------SLYGP-------SPGGRGPEDSWLLLS 314
SP SP SP+ PE+ + +L G SP E+SWL
Sbjct: 183 PYASPQTSPWQSPCVSPKTTDPEEGFPRGLGACTLLGSPRHSPSTSPRASVTEESWL--- 239
Query: 315 APGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGS 374
S RPASPC KR+YS +G SP S S P P + + D
Sbjct: 240 ----GARSSRPASPCNKRKYSLNGRQPPYSPHHSPTPS-------PHGSPRVSVTDDSWL 288
Query: 375 PGPFDYVGAPPA---------------ESIPQKTRRTSSEQAVALPRSEEPASCN-GKLP 418
Y + + +P K+R+T+ EQ ++ EP + G P
Sbjct: 289 GNTTQYTSSAIVAAINALTTDSSLDLGDGVPVKSRKTTLEQPPSVALKVEPVGEDLGSPP 348
Query: 419 LGAEESVAPPGGS-----RKEVAGMDYLAVPS-PLAWSKARIGGHSPIFRTS----ALPP 468
A+ AP S RK YLAVP P W+K + P+ TS LP
Sbjct: 349 PPAD--FAPEDYSSFQHIRKGGFCDQYLAVPQHPYQWAKPK-----PLSPTSYMSPTLPA 401
Query: 469 LDWPLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVKAAPGGHPVVKLLGYSE-KPLTL 527
LDW LPS ELRIEVQP++HHRAHYETEGSRGAVKA+ GGHP+V+L GY E +PL L
Sbjct: 402 LDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQLHGYLENEPLML 461
Query: 528 QMFIGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANIDCA 587
Q+FIGTAD+R LRPHAFYQVHRITGK V+T S+EA++S TKVLE+ LLPEN+M A IDCA
Sbjct: 462 QLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPLLPENSMRAVIDCA 521
Query: 588 GILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQE 647
GILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQ G+ +S+Q AS PIECSQRSAQE
Sbjct: 522 GILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQVASNPIECSQRSAQE 581
Query: 648 LPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNEV 707
LP VE S + V GG+++VL+G NFL DSKV+F+E+ PDG WE EA +R
Sbjct: 582 LPLVEKQSTDSYPVVGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLCKPN 641
Query: 708 TLTLTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFRFLPV---ICKEEPLPDSSLRGF 764
+L + +P + N+R++ PV V FYV NG+RKRS Q F +LP I K EP D
Sbjct: 642 SLVVEIPPFRNQRITSPVHVSFYVCNGKRKRSQYQRFTYLPANVPIIKTEPTDDYE---- 697
Query: 765 PSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTG----PPPS 820
P+ + P SP PY S P + L GF P PQ P
Sbjct: 698 PAPTCGP--VSQGLSPLPRPYYSQQLAMPPDPSSCLVAGF-----PPCPQRSTLMPAAPG 750
Query: 821 YRPGLRMFPETRGTTGCAQP--------------PAVSFLPRPFPSDPYGGRGSSFSLGL 866
P L T G A P PAV +PRP + P G
Sbjct: 751 VSPKLHDLSPAAYTKGVASPGHCHLGLPQPAGEAPAVQDVPRPVATHP----------GS 800
Query: 867 PFSPPAPFRP 876
P PP P
Sbjct: 801 PGQPPPALLP 810
>gi|19923350 nuclear factor of activated T-cells, cytosolic
component 1 isoform B [Homo sapiens]
Length = 825
Score = 427 bits (1099), Expect = e-119
Identities = 332/847 (39%), Positives = 406/847 (47%), Gaps = 147/847 (17%)
Query: 113 EPPPYGAAPIGIPRPPPPRPGMHSPPPRPAPS---------PGTWESQPARSVRLGGPGG 163
E YG A + P P P HS P P + P + GGP G
Sbjct: 41 EEEHYGYASSNVS-PALPLPTAHSTLPAPCHNLQTSTPGIIPPADHPSGYGAALDGGPAG 99
Query: 164 GAGGAG-----GGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGY 218
+G G LE P I ITS +N + D D P
Sbjct: 100 YFLSSGHTRPDGAPALESPRIEITSCL------GLYHNNNQFFHDVEVEDVLP------- 146
Query: 219 REAGGQGGGAFFSPSPGSSSLSSWSFFSDASD-EAALYAACDEVESELNEAASRFGLG-- 275
+ SPS + SL S + D S A + SE + S +
Sbjct: 147 --------SSKRSPSTATLSLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESNYSYPYA 198
Query: 276 ----SPLPSPRASPRPWTPEDPW-------SLYGP-------SPGGRGPEDSWLLLSAPG 317
SP SP SP+ PE+ + +L G SP E+SWL
Sbjct: 199 SPQTSPWQSPCVSPKTTDPEEGFPRGLGACTLLGSPRHSPSTSPRASVTEESWL------ 252
Query: 318 PTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGP 377
S RPASPC KR+YS +G SP S S P P + + D
Sbjct: 253 -GARSSRPASPCNKRKYSLNGRQPPYSPHHSPTPS-------PHGSPRVSVTDDSWLGNT 304
Query: 378 FDYVGAPPA---------------ESIPQKTRRTSSEQAVALPRSEEPASCN-GKLPLGA 421
Y + + +P K+R+T+ EQ ++ EP + G P A
Sbjct: 305 TQYTSSAIVAAINALTTDSSLDLGDGVPVKSRKTTLEQPPSVALKVEPVGEDLGSPPPPA 364
Query: 422 EESVAPPGGS-----RKEVAGMDYLAVPS-PLAWSKARIGGHSPIFRTS----ALPPLDW 471
+ AP S RK YLAVP P W+K + P+ TS LP LDW
Sbjct: 365 D--FAPEDYSSFQHIRKGGFCDQYLAVPQHPYQWAKPK-----PLSPTSYMSPTLPALDW 417
Query: 472 PLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVKAAPGGHPVVKLLGYSE-KPLTLQMF 530
LPS ELRIEVQP++HHRAHYETEGSRGAVKA+ GGHP+V+L GY E +PL LQ+F
Sbjct: 418 QLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQLHGYLENEPLMLQLF 477
Query: 531 IGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANIDCAGIL 590
IGTAD+R LRPHAFYQVHRITGK V+T S+EA++S TKVLE+ LLPEN+M A IDCAGIL
Sbjct: 478 IGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPLLPENSMRAVIDCAGIL 537
Query: 591 KLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQELPQ 650
KLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQ G+ +S+Q AS PIECSQRSAQELP
Sbjct: 538 KLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQVASNPIECSQRSAQELPL 597
Query: 651 VEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLT 710
VE S + V GG+++VL+G NFL DSKV+F+E+ PDG WE EA +R +L
Sbjct: 598 VEKQSTDSYPVVGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLCKPNSLV 657
Query: 711 LTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFRFLPV---ICKEEPLPDSSLRGFPSA 767
+ +P + N+R++ PV V FYV NG+RKRS Q F +LP I K EP D P+
Sbjct: 658 VEIPPFRNQRITSPVHVSFYVCNGKRKRSQYQRFTYLPANVPIIKTEPTDDYE----PAP 713
Query: 768 SATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTG----PPPSYRP 823
+ P SP PY S P + L GF P PQ P P
Sbjct: 714 TCGP--VSQGLSPLPRPYYSQQLAMPPDPSSCLVAGF-----PPCPQRSTLMPAAPGVSP 766
Query: 824 GLRMFPETRGTTGCAQP--------------PAVSFLPRPFPSDPYGGRGSSFSLGLPFS 869
L T G A P PAV +PRP + P G P
Sbjct: 767 KLHDLSPAAYTKGVASPGHCHLGLPQPAGEAPAVQDVPRPVATHP----------GSPGQ 816
Query: 870 PPAPFRP 876
PP P
Sbjct: 817 PPPALLP 823
>gi|209862843 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 2 isoform D [Homo sapiens]
Length = 901
Score = 426 bits (1096), Expect = e-119
Identities = 306/698 (43%), Positives = 366/698 (52%), Gaps = 94/698 (13%)
Query: 132 PGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIR-ITSISPTPEP 190
PG P R P ++PA GA G R+ PS I ++ P
Sbjct: 63 PGRFGEPDRVGPQKFLSAAKPA----------GASGLSP-RIEITPSHELIQAVGPLRMR 111
Query: 191 PAAL--EDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDA 248
A L E P A SPR P GF GYRE SP SS SS SF SD
Sbjct: 112 DAGLLVEQPPLAGVAASPRFTLPVPGFEGYREP--------LCLSPASSG-SSASFISDT 162
Query: 249 SDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGP-- 306
SP SP SP P+D + P P
Sbjct: 163 F--------------------------SPYTSPCVSPNNGGPDDLCPQFQNIPAHYSPRT 196
Query: 307 -----------EDSWLLLSAPGPTPASPRPASPCGKRRYSSS----GTPSSASPALSRRG 351
EDS L +P P PAS R +SP KRR+S + P ASP SR
Sbjct: 197 SPIMSPRTSLAEDSCLGRHSPVPRPAS-RSSSPGAKRRHSCAEALVALPPGASPQRSRSP 255
Query: 352 SLGEEGSEPPPPPPLPLARDP--GSPGPFDYVGAPPAES---IPQKTRRTSSEQAVALPR 406
S P P P GS D + + +S IP K +TS + + P
Sbjct: 256 SPQPSSHVAPQDHGSPAGYPPVAGSAVIMDALNSLATDSPCGIPPKMWKTSPDPS---PV 312
Query: 407 SEEPASCNGKLP---LGAEESVAP-PGGSRKEVAGMDYLAVPSPLAWSKARIGGHSPIFR 462
S P+ LP A E + P G R+ A L VP W K + PI
Sbjct: 313 SAAPSKAG--LPRHIYPAVEFLGPCEQGERRNSAPESILLVPP--TWPKPLVPA-IPICS 367
Query: 463 ---TSALPPLDWPLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVKAAPGGHPVVKLLG 519
T++LPPL+WPL SQ ELRIEVQP+ HHRAHYETEGSRGAVKA GGHPVV+L G
Sbjct: 368 IPVTASLPPLEWPLSSQSGSYELRIEVQPKPHHRAHYETEGSRGAVKAPTGGHPVVQLHG 427
Query: 520 YSE-KPLTLQMFIGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPEN 578
Y E KPL LQ+FIGTADER L+PHAFYQVHRITGK V T SYE +V TKVLE+ L P+N
Sbjct: 428 YMENKPLGLQIFIGTADERILKPHAFYQVHRITGKTVTTTSYEKIVGNTKVLEIPLEPKN 487
Query: 579 NMAANIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPI 638
NM A IDCAGILKLRN+DIELRKGETDIGRKNTRVRLVFRVH+P+ G++VS+Q AS PI
Sbjct: 488 NMRATIDCAGILKLRNADIELRKGETDIGRKNTRVRLVFRVHIPESSGRIVSLQTASNPI 547
Query: 639 ECSQRSAQELPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEAT 698
ECSQRSA ELP VE +C V GG++++LTG NF +SKVVF E+ DG+ WE EAT
Sbjct: 548 ECSQRSAHELPMVERQDTDSCLVYGGQQMILTGQNFTSESKVVFTEKTTDGQQIWEMEAT 607
Query: 699 VNRLQSNEVTLTLTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFRFLPV-ICKEEPLP 757
V++ +S L + +PEY NK + PV+V FYV NG+RKRS Q F + PV K EP
Sbjct: 608 VDKDKSQPNMLFVEIPEYRNKHIRTPVKVNFYVINGKRKRSQPQHFTYHPVPAIKTEPTD 667
Query: 758 DSSLRGFPSASATPFGTDMDFSPPRPPYPSYPHEDPAC 795
+ P+ +P + P P +P E P+C
Sbjct: 668 EYD----PTLICSPTHGGLGSQPYYPQHPMVA-ESPSC 700
>gi|27502393 nuclear factor of activated T-cells, cytosolic
component 1 isoform A [Homo sapiens]
Length = 716
Score = 414 bits (1064), Expect = e-115
Identities = 294/698 (42%), Positives = 363/698 (52%), Gaps = 105/698 (15%)
Query: 113 EPPPYGAAPIGIPRPPPPRPGMHSPPPRPAPS---------PGTWESQPARSVRLGGPGG 163
E YG A + P P P HS P P + P + GGP G
Sbjct: 41 EEEHYGYASSNVS-PALPLPTAHSTLPAPCHNLQTSTPGIIPPADHPSGYGAALDGGPAG 99
Query: 164 GAGGAG-----GGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGY 218
+G G LE P I ITS +N + D D P
Sbjct: 100 YFLSSGHTRPDGAPALESPRIEITSCL------GLYHNNNQFFHDVEVEDVLP------- 146
Query: 219 REAGGQGGGAFFSPSPGSSSLSSWSFFSDASD-EAALYAACDEVESELNEAASRFGLG-- 275
+ SPS + SL S + D S A + SE + S +
Sbjct: 147 --------SSKRSPSTATLSLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESNYSYPYA 198
Query: 276 ----SPLPSPRASPRPWTPEDPW-------SLYGP-------SPGGRGPEDSWLLLSAPG 317
SP SP SP+ PE+ + +L G SP E+SWL
Sbjct: 199 SPQTSPWQSPCVSPKTTDPEEGFPRGLGACTLLGSPRHSPSTSPRASVTEESWL------ 252
Query: 318 PTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGP 377
S RPASPC KR+YS +G SP S S P P + + D
Sbjct: 253 -GARSSRPASPCNKRKYSLNGRQPPYSPHHSPTPS-------PHGSPRVSVTDDSWLGNT 304
Query: 378 FDYVGAPPA---------------ESIPQKTRRTSSEQAVALPRSEEPASCN-GKLPLGA 421
Y + + +P K+R+T+ EQ ++ EP + G P A
Sbjct: 305 TQYTSSAIVAAINALTTDSSLDLGDGVPVKSRKTTLEQPPSVALKVEPVGEDLGSPPPPA 364
Query: 422 EESVAPPGGS-----RKEVAGMDYLAVPS-PLAWSKARIGGHSPIFRTS----ALPPLDW 471
+ AP S RK YLAVP P W+K + P+ TS LP LDW
Sbjct: 365 D--FAPEDYSSFQHIRKGGFCDQYLAVPQHPYQWAKPK-----PLSPTSYMSPTLPALDW 417
Query: 472 PLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVKAAPGGHPVVKLLGYSE-KPLTLQMF 530
LPS ELRIEVQP++HHRAHYETEGSRGAVKA+ GGHP+V+L GY E +PL LQ+F
Sbjct: 418 QLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQLHGYLENEPLMLQLF 477
Query: 531 IGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANIDCAGIL 590
IGTAD+R LRPHAFYQVHRITGK V+T S+EA++S TKVLE+ LLPEN+M A IDCAGIL
Sbjct: 478 IGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPLLPENSMRAVIDCAGIL 537
Query: 591 KLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQELPQ 650
KLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQ G+ +S+Q AS PIECSQRSAQELP
Sbjct: 538 KLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQVASNPIECSQRSAQELPL 597
Query: 651 VEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLT 710
VE S + V GG+++VL+G NFL DSKV+F+E+ PDG WE EA +R +L
Sbjct: 598 VEKQSTDSYPVVGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLCKPNSLV 657
Query: 711 LTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFRFLP 748
+ +P + N+R++ PV V FYV NG+RKRS Q F +LP
Sbjct: 658 VEIPPFRNQRITSPVHVSFYVCNGKRKRSQYQRFTYLP 695
>gi|27502388 nuclear factor of activated T-cells, cytosolic
component 1 isoform D [Homo sapiens]
Length = 353
Score = 304 bits (778), Expect = 3e-82
Identities = 184/371 (49%), Positives = 218/371 (58%), Gaps = 42/371 (11%)
Query: 527 LQMFIGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANIDC 586
LQ+FIGTAD+R LRPHAFYQVHRITGK V+T S+EA++S TKVLE+ LLPEN+M A IDC
Sbjct: 2 LQLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPLLPENSMRAVIDC 61
Query: 587 AGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSAQ 646
AGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQ G+ +S+Q AS PIECSQRSAQ
Sbjct: 62 AGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQVASNPIECSQRSAQ 121
Query: 647 ELPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSNE 706
ELP VE S + V GG+++VL+G NFL DSKV+F+E+ PDG WE EA +R
Sbjct: 122 ELPLVEKQSTDSYPVVGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLCKP 181
Query: 707 VTLTLTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFRFLPV---ICKEEPLPDSSLRG 763
+L + +P + N+R++ PV V FYV NG+RKRS Q F +LP I K EP D
Sbjct: 182 NSLVVEIPPFRNQRITSPVHVSFYVCNGKRKRSQYQRFTYLPANVPIIKTEPTDDYE--- 238
Query: 764 FPSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTG----PPP 819
P+ + P SP PY S P + L GF P PQ P
Sbjct: 239 -PAPTCGP--VSQGLSPLPRPYYSQQLAMPPDPSSCLVAGF-----PPCPQRSTLMPAAP 290
Query: 820 SYRPGLRMFPETRGTTGCAQP--------------PAVSFLPRPFPSDPYGGRGSSFSLG 865
P L T G A P PAV +PRP + P G
Sbjct: 291 GVSPKLHDLSPAAYTKGVASPGHCHLGLPQPAGEAPAVQDVPRPVATHP----------G 340
Query: 866 LPFSPPAPFRP 876
P PP P
Sbjct: 341 SPGQPPPALLP 351
Score = 37.0 bits (84), Expect = 0.089
Identities = 40/120 (33%), Positives = 51/120 (42%), Gaps = 20/120 (16%)
Query: 276 SPLPSPRASPRPWTPEDPWS--LYGPSPGGRGPEDSWLLLSAPGPTPASPRPASPCGKRR 333
SPLP P S + P DP S + G P P+ S L+ +APG +P SP
Sbjct: 251 SPLPRPYYSQQLAMPPDPSSCLVAGFPPC---PQRSTLMPAAPGVSPKL-HDLSP----- 301
Query: 334 YSSSGTPSSASPALSRRGSLGEEGSEPPPPP-PLPLARDPGSPGPFDYVGAPPAESIPQK 392
++ T ASP G G P P P+A PGSP G PP +PQ+
Sbjct: 302 --AAYTKGVASPGHCHLGLPQPAGEAPAVQDVPRPVATHPGSP------GQPPPALLPQQ 353
>gi|27886520 nuclear factor of activated T-cells 5 isoform a [Homo
sapiens]
Length = 1455
Score = 196 bits (499), Expect = 7e-50
Identities = 116/283 (40%), Positives = 165/283 (58%), Gaps = 7/283 (2%)
Query: 467 PPLDWPLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVK-AAPGGHPVVKLLGYSEKPL 525
P L P + E EL+I VQP HRA Y TEGSRG+VK G P VKL G++E P+
Sbjct: 191 PMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNE-PV 249
Query: 526 TLQMFIGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANID 585
LQ+F+G D ++PH FYQ R+TG+ T E + GT V+E+ L P NNM +D
Sbjct: 250 VLQVFVGN-DSGRVKPHGFYQACRVTGRNT-TPCKEVDIEGTTVIEVGLDPSNNMTLAVD 307
Query: 586 CAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSA 645
C GILKLRN+D+E R G +K+TR RLVFRV++ + G +++Q S PI C+Q +
Sbjct: 308 CVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG 367
Query: 646 QELPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSN 705
+P++ S +CSV+G EE+ L G NFL +KV+F E D + W+ EA ++ +
Sbjct: 368 --VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFH 424
Query: 706 EVTLTLTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFRFLP 748
+ L + VP Y ++ ++ PV V YV + Q F + P
Sbjct: 425 QNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTP 467
>gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo
sapiens]
Length = 1531
Score = 196 bits (499), Expect = 7e-50
Identities = 116/283 (40%), Positives = 165/283 (58%), Gaps = 7/283 (2%)
Query: 467 PPLDWPLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVK-AAPGGHPVVKLLGYSEKPL 525
P L P + E EL+I VQP HRA Y TEGSRG+VK G P VKL G++E P+
Sbjct: 267 PMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNE-PV 325
Query: 526 TLQMFIGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANID 585
LQ+F+G D ++PH FYQ R+TG+ T E + GT V+E+ L P NNM +D
Sbjct: 326 VLQVFVGN-DSGRVKPHGFYQACRVTGRNT-TPCKEVDIEGTTVIEVGLDPSNNMTLAVD 383
Query: 586 CAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSA 645
C GILKLRN+D+E R G +K+TR RLVFRV++ + G +++Q S PI C+Q +
Sbjct: 384 CVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG 443
Query: 646 QELPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSN 705
+P++ S +CSV+G EE+ L G NFL +KV+F E D + W+ EA ++ +
Sbjct: 444 --VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFH 500
Query: 706 EVTLTLTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFRFLP 748
+ L + VP Y ++ ++ PV V YV + Q F + P
Sbjct: 501 QNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTP 543
>gi|164419746 nuclear factor of activated T-cells 5 isoform d [Homo
sapiens]
Length = 1548
Score = 196 bits (499), Expect = 7e-50
Identities = 116/283 (40%), Positives = 165/283 (58%), Gaps = 7/283 (2%)
Query: 467 PPLDWPLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVK-AAPGGHPVVKLLGYSEKPL 525
P L P + E EL+I VQP HRA Y TEGSRG+VK G P VKL G++E P+
Sbjct: 285 PMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNE-PV 343
Query: 526 TLQMFIGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANID 585
LQ+F+G D ++PH FYQ R+TG+ T E + GT V+E+ L P NNM +D
Sbjct: 344 VLQVFVGN-DSGRVKPHGFYQACRVTGRNT-TPCKEVDIEGTTVIEVGLDPSNNMTLAVD 401
Query: 586 CAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSA 645
C GILKLRN+D+E R G +K+TR RLVFRV++ + G +++Q S PI C+Q +
Sbjct: 402 CVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG 461
Query: 646 QELPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSN 705
+P++ S +CSV+G EE+ L G NFL +KV+F E D + W+ EA ++ +
Sbjct: 462 --VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFH 518
Query: 706 EVTLTLTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFRFLP 748
+ L + VP Y ++ ++ PV V YV + Q F + P
Sbjct: 519 QNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTP 561
>gi|164419744 nuclear factor of activated T-cells 5 isoform b [Homo
sapiens]
Length = 1549
Score = 196 bits (499), Expect = 7e-50
Identities = 116/283 (40%), Positives = 165/283 (58%), Gaps = 7/283 (2%)
Query: 467 PPLDWPLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVK-AAPGGHPVVKLLGYSEKPL 525
P L P + E EL+I VQP HRA Y TEGSRG+VK G P VKL G++E P+
Sbjct: 285 PMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNE-PV 343
Query: 526 TLQMFIGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANID 585
LQ+F+G D ++PH FYQ R+TG+ T E + GT V+E+ L P NNM +D
Sbjct: 344 VLQVFVGN-DSGRVKPHGFYQACRVTGRNT-TPCKEVDIEGTTVIEVGLDPSNNMTLAVD 401
Query: 586 CAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSA 645
C GILKLRN+D+E R G +K+TR RLVFRV++ + G +++Q S PI C+Q +
Sbjct: 402 CVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG 461
Query: 646 QELPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSN 705
+P++ S +CSV+G EE+ L G NFL +KV+F E D + W+ EA ++ +
Sbjct: 462 --VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFH 518
Query: 706 EVTLTLTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFRFLP 748
+ L + VP Y ++ ++ PV V YV + Q F + P
Sbjct: 519 QNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTP 561
>gi|27886524 nuclear factor of activated T-cells 5 isoform a [Homo
sapiens]
Length = 1455
Score = 196 bits (499), Expect = 7e-50
Identities = 116/283 (40%), Positives = 165/283 (58%), Gaps = 7/283 (2%)
Query: 467 PPLDWPLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVK-AAPGGHPVVKLLGYSEKPL 525
P L P + E EL+I VQP HRA Y TEGSRG+VK G P VKL G++E P+
Sbjct: 191 PMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNE-PV 249
Query: 526 TLQMFIGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANID 585
LQ+F+G D ++PH FYQ R+TG+ T E + GT V+E+ L P NNM +D
Sbjct: 250 VLQVFVGN-DSGRVKPHGFYQACRVTGRNT-TPCKEVDIEGTTVIEVGLDPSNNMTLAVD 307
Query: 586 CAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSA 645
C GILKLRN+D+E R G +K+TR RLVFRV++ + G +++Q S PI C+Q +
Sbjct: 308 CVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG 367
Query: 646 QELPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSN 705
+P++ S +CSV+G EE+ L G NFL +KV+F E D + W+ EA ++ +
Sbjct: 368 --VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFH 424
Query: 706 EVTLTLTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFRFLP 748
+ L + VP Y ++ ++ PV V YV + Q F + P
Sbjct: 425 QNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTP 467
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 70.1 bits (170), Expect = 9e-12
Identities = 139/495 (28%), Positives = 171/495 (34%), Gaps = 102/495 (20%)
Query: 42 NSSPGLPSSSSPGRDLGA----PAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEE 97
N+SPG SSPGR G P G G +E + G+ EAP A G
Sbjct: 99 NTSPG--PVSSPGRASGTTRPGPLGQKGLRISAEETV----ARGKATEAPKRSALSAGAR 152
Query: 98 LDSEDAPPCCRLALGEPPPYGA-------APIGIPRPPP---PRPGMHSPPPR--PAPSP 145
D+ P G P P A +G+PRP P PRP P A
Sbjct: 153 RDTSGPTP------GTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEH 206
Query: 146 GTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGS 205
T E PA R AGGG L+ P+ R S S TP A P A G+
Sbjct: 207 STTEPSPAARRR--------PSAGGG--LQRPASRSLSSSATPLSSPA-RSGPSA--RGT 253
Query: 206 PR-----DYPPPEGFGGYREAGGQGGGAFFSPSPG---SSSLSSWSFFSDASDEA--ALY 255
PR P P+G R +P+ G SS L++ S + S A +L
Sbjct: 254 PRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQ 313
Query: 256 AACDEVESELNEAASRFG----------LGSPLPSPRASPRPWTPED---PWSLYGPSPG 302
+ ++A + G L SP SP A+P P P P PSP
Sbjct: 314 TLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPP 373
Query: 303 GRGPEDSWL-------------LLSAPGPTPASP---RPASPCGKRRYSSSGTPSSASPA 346
P LL AP P SP P SP S S TP S +P
Sbjct: 374 ASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPP 433
Query: 347 LSRRGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVGAPP---AESIPQKTRRTSSEQAVA 403
L S P PP P A P P + APP A+ PQ ++ A
Sbjct: 434 SLAAPPLQVPPSPPASPPMSPSATPPPQAPP--PLAAPPLQLAKPPPQAPPALATPPLQA 491
Query: 404 LPRSEEPASCNGKLPLGAEESV------APPGGSRKEVAGMDYLAVPSPLAWSKARIGGH 457
LP PAS G+ P S+ PP + +A PSP A
Sbjct: 492 LP--SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPA--------- 540
Query: 458 SPIFRTSALPPLDWP 472
SP + PP P
Sbjct: 541 SPTLQAPRRPPTPGP 555
Score = 57.0 bits (136), Expect = 8e-08
Identities = 117/461 (25%), Positives = 146/461 (31%), Gaps = 70/461 (15%)
Query: 32 PGLSKPDFPGNSSPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGA 91
PGL P PG+ P P + + R LGA AG++G + A
Sbjct: 22 PGLLTPRPPGSPRPPPPVTPAALRVLGA-AGAVGRKPLAER------------------A 62
Query: 92 GGLGEELDSEDAPPCCRLALGEPPPYG----AAPIGIPRP-PPPRPGMHSPPPRPAPSPG 146
GG+G E AP PP G A P P P PG S RP P
Sbjct: 63 GGIGGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQ 122
Query: 147 -----TWESQPARSVRLGGPGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAW 201
+ E AR P A AG R P+ TP P A
Sbjct: 123 KGLRISAEETVARGKATEAPKRSALSAGARRDTSGPT------PGTPSPAMARRSRAAGT 176
Query: 202 GDGSPRDYPP----PEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAA 257
G PR P P G + + PSP + S +L ++
Sbjct: 177 EVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSS 236
Query: 258 CDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAPG 317
+ S PS R +PR P P P P G L P
Sbjct: 237 ATPLSSPARSG----------PSARGTPR--APAHPSQ---PKPKG------LQALRPPQ 275
Query: 318 PTPASPRPASPCGKRRYSSSGTPS-SASPALSRRGSLGEEGSEPPPPPPLPLARDPGSP- 375
TP A G S TPS SA P+ S SL + PP PP GSP
Sbjct: 276 VTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSL-QTLPSPPATPPSQATTSLGSPT 334
Query: 376 --GPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLG--AEESVAPPGGS 431
++ +PP P T + A+ALP + P S PL A S P
Sbjct: 335 LQATHSFLPSPPLS--PLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNAL 392
Query: 432 RKEVAGMDYLAVPSPLAWSKARIGGHSPIFRTSALPPLDWP 472
+ + PSP + P+ SA PP P
Sbjct: 393 AVHLLQAPFSPPPSPPVQAPFSPPASPPV-SPSATPPSQAP 432
Score = 55.1 bits (131), Expect = 3e-07
Identities = 97/359 (27%), Positives = 123/359 (34%), Gaps = 76/359 (21%)
Query: 4 TLPSLLPASLASISHRVTNLPSNSLSHNPGLSKPDFPGNSSPGLPSSSSPGRDLGAPAGS 63
T PS P SLA+ +V P S P +S P +P P ++P L P
Sbjct: 426 TPPSQAPPSLAAPPLQVPPSPPAS----PPMSPSATPPPQAP--PPLAAPPLQLAKPPPQ 479
Query: 64 MGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEP--PPYGAAP 121
A + +PP G S P LA P PP AAP
Sbjct: 480 APPALATPPL--------QALPSPPASFPGQAPFSPSASLP-MSPLATPPPQAPPVLAAP 530
Query: 122 I-GIPRPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIR 180
+ +P PP P + +P P P P T S P ++ L PG
Sbjct: 531 LLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLAL-APG------------------ 571
Query: 181 ITSISPTPEP---PAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSS 237
P P P P++ PD G S PE GY G GGA SP P
Sbjct: 572 -----PPPPPSRSPSSTLSGPDLAGHSSSAT-STPEELRGY--DSGPEGGAAASPPPD-- 621
Query: 238 SLSSWSFFSDASDEAALYAACDEVESELNEA---ASRFGLGSPLPSPRASPRPWTPEDPW 294
A AAC A A R G+PLP P A+ P + +
Sbjct: 622 ---------------AELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPAT-GPGSADGLC 665
Query: 295 SLYGPSPGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSL 353
++Y GPE + APG P P + GK + SS SP +R G L
Sbjct: 666 TIYET----EGPESA---TPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGEL 717
Score = 51.6 bits (122), Expect = 3e-06
Identities = 117/422 (27%), Positives = 149/422 (35%), Gaps = 98/422 (23%)
Query: 103 APPCCRLALGEPPPYGAAPIGIP--RPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGG 160
+PP LA PPP + +P + PP P SPP P L
Sbjct: 344 SPPLSPLAT--PPPQAPPALALPPLQAPPSPPA--SPPLSP----------------LAT 383
Query: 161 PGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYRE 220
P A A +L+ P SP P PP +P A SP PP +
Sbjct: 384 PSPQAPNALAVHLLQAP------FSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAA 437
Query: 221 AGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSP--- 277
Q PSP +S S S L A ++ +A L +P
Sbjct: 438 PPLQ-----VPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPP--ALATPPLQ 490
Query: 278 -LPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAP-GPTPASPRPASPC--GKRR 333
LPSP AS P P + SP P + +L+AP P SP PASP RR
Sbjct: 491 ALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSP-PASPTLQAPRR 549
Query: 334 YSSSGTPSSAS-PALSRRGSLGEEGSEPPPPPPLPLARDPGS--PGPFDYVG-APPAESI 389
+ G +S S P L+ + G PPPPP +R P S GP D G + A S
Sbjct: 550 PPTPGPDTSVSGPRLTLALAPG-----PPPPP----SRSPSSTLSGP-DLAGHSSSATST 599
Query: 390 PQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEESVAPPGGSRKEVAGMDYLAVPSPLAW 449
P++ R S P G + PP LA P AW
Sbjct: 600 PEELRGYDSG------------------PEGGAAASPPPDAE---------LAACHPAAW 632
Query: 450 SKARIGGHSPI-FRTSALPPLDWPLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVKAA 508
S+ G P+ FR + PL WP + + + YETEG A A
Sbjct: 633 SR---GPAPPLAFRGAPGAPLPWPPATGPGSADGLCTI---------YETEGPESAT-PA 679
Query: 509 PG 510
PG
Sbjct: 680 PG 681
Score = 50.8 bits (120), Expect = 6e-06
Identities = 107/460 (23%), Positives = 150/460 (32%), Gaps = 46/460 (10%)
Query: 12 SLASISHRVTNLPSNSLSHNPGLSKPDFPGNSSPGLPSSSSPGRDLGAPAGSMGAASCED 71
+L +S PS S +P + P SP S LG+P +
Sbjct: 286 ALGPLSSSPLATPSPSAPPSPS-APPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPS 344
Query: 72 EELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEPPPYGAAPIGI---PRPP 128
L L + P L L +PP LA P A + + P P
Sbjct: 345 PPLS-PLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSP 403
Query: 129 PPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIRITSISPTP 188
PP P + +P PA P + + P PS+ + P
Sbjct: 404 PPSPPVQAPFSPPASPPVSPSATPPSQAP-------------------PSLAAPPLQVPP 444
Query: 189 EPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGG--QGGGAFFSPSPGSSSLSSWSFFS 246
PPA+ +P A P PPP + A Q A +P + SF
Sbjct: 445 SPPASPPMSPSAT---PPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPG 501
Query: 247 DASDEAALYAACDEVESELNEAASRFGLGSPL----PSPRASPRPWTPEDPWSLYGPSPG 302
A + + + +A L +PL PSP ASP P P GP
Sbjct: 502 QAPFSPSASLPMSPLATPPPQAPPV--LAAPLLQVPPSPPASPTLQAPRRP-PTPGPDTS 558
Query: 303 GRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPP 362
GP + L P P P+ ++ G S + +S L S E G+ P
Sbjct: 559 VSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASP 618
Query: 363 PPPL------PLARDPGSPGPFDYVGAPPAE-SIPQKTRRTSSEQAVALPRSEEPASCNG 415
PP P A G P + GAP A P T S++ + +E P S
Sbjct: 619 PPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESAT- 677
Query: 416 KLPLGAEESVAPPGGSRKEVAGMDYLAVPSPLAWSKARIG 455
P + +P K AG A S + +AR+G
Sbjct: 678 PAPGALDPGPSPGTSGGKAAAGAG--AGASSRSPKQARLG 715
Score = 50.4 bits (119), Expect = 8e-06
Identities = 62/186 (33%), Positives = 71/186 (38%), Gaps = 34/186 (18%)
Query: 755 PLPDSSLRGFPSASATPFGTDMDFSPPRPP----YPSYPHEDPACET-----PYLSEGFG 805
PL S L PS SA P SP PP PS P P+ T P L
Sbjct: 289 PLSSSPL-ATPSPSAPP-------SPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHS 340
Query: 806 Y-GMPPLYPQTGPPPSYRPGLRMFPETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSSFSL 864
+ PPL P PPP P L + P + A PP +S L P P P + L
Sbjct: 341 FLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPP-LSPLATPSPQAP--NALAVHLL 397
Query: 865 GLPFSPP------APFRPPPLP-----ASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPG 913
PFSPP APF PP P A+PP + P PS + PL P P
Sbjct: 398 QAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAP-PSLA-APPLQVPPSPPASPPMSPS 455
Query: 914 EGAPEQ 919
P Q
Sbjct: 456 ATPPPQ 461
Score = 41.6 bits (96), Expect = 0.004
Identities = 37/118 (31%), Positives = 44/118 (37%), Gaps = 12/118 (10%)
Query: 778 FSPPRPPYPSYPHEDPACETPYLSEG------FGYGMPPLYPQTGPPPSYRPGLRMFPET 831
FSPP P S P+ P L+ PP+ P PPP P L P
Sbjct: 413 FSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 472
Query: 832 RGTTGCAQPPAVSFLP-RPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLEGP 888
PPA++ P + PS P +SF PFSP A PL PP P
Sbjct: 473 LAKPPPQAPPALATPPLQALPSPP-----ASFPGQAPFSPSASLPMSPLATPPPQAPP 525
Score = 41.2 bits (95), Expect = 0.005
Identities = 36/121 (29%), Positives = 42/121 (34%), Gaps = 15/121 (12%)
Query: 778 FSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMFPETRGTTGC 837
FSPP P P PA PP+ P PP P L P +
Sbjct: 401 FSPPPSPPVQAPFSPPAS-------------PPVSPSATPPSQAPPSLAAPPLQVPPSPP 447
Query: 838 AQPP-AVSFLPRPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSDVH 896
A PP + S P P P + P +PPA PPL A P FP Q+
Sbjct: 448 ASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPA-LATPPLQALPSPPASFPGQAPFS 506
Query: 897 P 897
P
Sbjct: 507 P 507
Score = 34.7 bits (78), Expect = 0.44
Identities = 48/180 (26%), Positives = 58/180 (32%), Gaps = 21/180 (11%)
Query: 755 PLPDSSLRGFPSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSE------GFGYGM 808
P P +S PSA+ P +PP P PA TP L F
Sbjct: 444 PSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQA 503
Query: 809 P-------PLYPQTGPPPSYRPGLR----MFPETRGTTGCAQPPAVSFLPRPFPSDPYGG 857
P P+ P PPP P L P + + Q P P P P G
Sbjct: 504 PFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRP--PTPGPDTSVSG 561
Query: 858 RGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAP 917
+ +L P PP P R P S P S + P GY+ GP G P
Sbjct: 562 PRLTLALA-PGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS-GPEGGAAASPP 619
Score = 33.5 bits (75), Expect = 0.98
Identities = 53/231 (22%), Positives = 68/231 (29%), Gaps = 53/231 (22%)
Query: 739 SPTQSFRFLPVICKEEPLPDSSLRGFPSASATPFGTDMDFSPPRPPY---------PSYP 789
SP SF LP S L P + + PP PP P P
Sbjct: 494 SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTP 553
Query: 790 HEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMF-PETRGTTGCAQPPAVSFLPR 848
D + P L+ G PP PPS P + P+ G + A R
Sbjct: 554 GPDTSVSGPRLTLALAPGPPP-------PPSRSPSSTLSGPDLAGHSSSATSTPEEL--R 604
Query: 849 PFPSDPYGG--------------------RGSSFSLGLPFSPPAPFRPPPLPASPPLEG- 887
+ S P GG RG + L +P AP PP +G
Sbjct: 605 GYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGL 664
Query: 888 -------------PFPSQSDVHPLPAEGYNKVGPGYGPGEGAPEQEKSRGG 925
P P D P P K G G G + +++R G
Sbjct: 665 CTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLG 715
Score = 32.7 bits (73), Expect = 1.7
Identities = 34/120 (28%), Positives = 45/120 (37%), Gaps = 16/120 (13%)
Query: 779 SPPRPPY--PSYPHEDPACETP-----YLSEGFGYGMPPLYPQTGP--PPSYRPGLRMFP 829
+PP PP P P P+ + P +L + + PP P P PP+ P
Sbjct: 368 APPSPPASPPLSPLATPSPQAPNALAVHLLQA-PFSPPPSPPVQAPFSPPASPP-----V 421
Query: 830 ETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLP-ASPPLEGP 888
T PP+++ P P P S S P P P PPL A PP + P
Sbjct: 422 SPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAP 481
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 68.6 bits (166), Expect = 3e-11
Identities = 96/352 (27%), Positives = 120/352 (34%), Gaps = 53/352 (15%)
Query: 88 PLGAGGLGEELDSEDAPPCCRLALGEPPPYGAAPIG---IPRPPPPRPGMHSPPPRPAPS 144
P GA G G +E AP A EPPP G A G RP PP P P PAP
Sbjct: 67 PAGAAGAGPAAPAEGAPG----AAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAP- 121
Query: 145 PGTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDG 204
PA +R P G AG P +++ PEP A P
Sbjct: 122 -------PAAKLR-PPPEGSAGSCA-------PVPAAAAVAAGPEPAPAGPAKPAGPAAL 166
Query: 205 SPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAAL----YAACDE 260
+ R P P G G G P PG + + AAL +AA
Sbjct: 167 AARAGPGP----------GPGPGP--GPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPA 214
Query: 261 VESELNEAASRFGLGSPLPSPRASPRP-WTPEDPWSLYGPSPGGRGPEDSWLLLSAPGPT 319
V N A+ PLP P A TP + P+P P + +AP
Sbjct: 215 VSLVNNGPAALL----PLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAA-PAPAAPAAA 269
Query: 320 PASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLARDP----GSP 375
P P PA R P +A+PA+ + GS P P P A P G P
Sbjct: 270 PPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQP 329
Query: 376 GPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEESVAP 427
GP GA A P + A P + + + +G A + P
Sbjct: 330 GP----GAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGP 377
Score = 57.8 bits (138), Expect = 5e-08
Identities = 99/414 (23%), Positives = 136/414 (32%), Gaps = 80/414 (19%)
Query: 40 PGNSSPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELD 99
PG P P SP R L PAG A+ + PP G+ G
Sbjct: 97 PGGGGPQRPGPPSPRRPL-VPAGPAPPAA--------------KLRPPPEGSAG-----S 136
Query: 100 SEDAPPCCRLALG-EPPPYGAAPIGIPRPPPPRPGMHSPPPRPAPSPGTWESQPARSVRL 158
P +A G EP P G A P R G P P P P PG +PA
Sbjct: 137 CAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGP-GPGPGPGPGPGPGPGKPA----- 190
Query: 159 GGPGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGY 218
GPG G +L ++S PAAL P G+ PP G
Sbjct: 191 -GPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVG---- 245
Query: 219 REAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPL 278
A P+P + S A+ A AA +R G P
Sbjct: 246 ---------AAAPPAPAAPS-------PPAAPAPAAPAAAPPPPPPAPATLAR-PPGHPA 288
Query: 279 PSPRASPRPWTPE------DPWSLYGPSPGGRGPEDSWLLLSAPGPTPASPRPA------ 326
P A+P P + P+P GP + PGP A+ PA
Sbjct: 289 GPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAG---VSGQPGPGAAAAAPAPGVKAE 345
Query: 327 --------SPCGKRRYSSSGTPSSASPAL---SRRGSLGEEGSEPPPPPPLPLARDPGSP 375
+P + ++SG S+A+ + + +G+L + PPP P P G+
Sbjct: 346 SPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAA 405
Query: 376 GPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEESVAPPG 429
G + + R T + +A PR +P + P + PPG
Sbjct: 406 GAVTQSLSRTPTATTSGIRATLTPTVLA-PRLPQPP----QNPTNIQNFQLPPG 454
Score = 35.0 bits (79), Expect = 0.34
Identities = 35/120 (29%), Positives = 43/120 (35%), Gaps = 20/120 (16%)
Query: 830 ETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSSFSLGLPFSPPAPF---RPPPLPASPPLE 886
+T G A PPA + PS P ++ + P PPAP RPP PA PP
Sbjct: 239 QTPPFVGAAAPPAPAA-----PSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTA 293
Query: 887 GPFPSQSDVHPLPAEGYN----KVGPGYGPGEGAPEQEKSRGGYSSGFRDSVPIQGITLE 942
P P PA N P P G P + G G + P G+ E
Sbjct: 294 AP------AVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPG--PGAAAAAPAPGVKAE 345
Score = 34.7 bits (78), Expect = 0.44
Identities = 41/136 (30%), Positives = 46/136 (33%), Gaps = 22/136 (16%)
Query: 783 PPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMFPETRGTTGCAQPPA 842
P P+ A E P G P P GPP RP + P PPA
Sbjct: 75 PAAPAEGAPGAAPEPPPAGRARPGGGGPQRP--GPPSPRRPLVPAGPA---------PPA 123
Query: 843 VSFLPRPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLE-GPFPSQSDVHPLPAE 901
P P G GS + P + P P PA P GP + P P
Sbjct: 124 AKLRP-----PPEGSAGSCAPV--PAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGP 176
Query: 902 GYNKVGPGYGPGEGAP 917
G GPG GPG G P
Sbjct: 177 G---PGPGPGPGPGKP 189
Score = 30.4 bits (67), Expect = 8.3
Identities = 37/134 (27%), Positives = 49/134 (36%), Gaps = 9/134 (6%)
Query: 318 PTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGP 377
P R A+ + SG+P+ A+ A + G G+ P PPP AR PG GP
Sbjct: 45 PRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAA-PEPPPAGRAR-PGGGGP 102
Query: 378 FDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEESVAP---PGGSRKE 434
PP+ P + A P E A +P A + P P G K
Sbjct: 103 --QRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKP 160
Query: 435 V--AGMDYLAVPSP 446
A + A P P
Sbjct: 161 AGPAALAARAGPGP 174
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 67.8 bits (164), Expect = 5e-11
Identities = 126/485 (25%), Positives = 154/485 (31%), Gaps = 96/485 (19%)
Query: 33 GLSKPDFPGN--SSPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLG 90
GL+ P P +PG S P G P G+ GA G+ E P G
Sbjct: 764 GLTGPIGPPGPAGAPGDKGESGPSGPAG-PTGARGAP-------------GDRGEPGPPG 809
Query: 91 AGGLGEELDSEDAPPCCRLALGEPPPYGA-------APIGIPRPPPPRPGMHSPPPRPA- 142
G ++ P A GEP GA P G PP P + +P + A
Sbjct: 810 PAGFAGPPGADGQPG----AKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGAR 865
Query: 143 --PSPGTWESQPARSVRLG--GPGGGAG-----------GAGGGRVLECPSIRITSISPT 187
P P + R+G GP G AG G G R P+ R + P
Sbjct: 866 GSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPP 925
Query: 188 PEP-PAALEDNPDAWGDGSPRDYPPPEGFGGYREA---GGQGGGAFFSPSPGSSSLSSWS 243
P PA + +P A G P P+G G R GQ G F PG S
Sbjct: 926 GPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQ 985
Query: 244 FFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSL-YGPSPG 302
S AS E GL P P S R P S SPG
Sbjct: 986 GPSGASGERGPPGPMGPP-----------GLAGP---PGESGREGAPGAEGSPGRDGSPG 1031
Query: 303 GRGPEDSWLLLSAPGP--TPASPRPASPCGKR----RYSSSGTPSSASPALSR------- 349
+G PG P +P P P GK +G P +R
Sbjct: 1032 AKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQG 1091
Query: 350 -RGSLGEEGSE----------------PPPPPPLPLARDP-GSPGPFDYVGAPPAESIPQ 391
RG GE G + PP PP P + P G+ GP G P + P
Sbjct: 1092 PRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPG 1151
Query: 392 KTRRTSSEQAVALPRSEEPASCNGKLPLGAEESVAPPGGSRKEVAGMDYLAVPSPLAWSK 451
K + P G P+G PPG AG D+ +P P K
Sbjct: 1152 KDGLNGLPGPIGPPGPRGRTGDAG--PVGPPGPPGPPGPPGPPSAGFDFSFLPQP-PQEK 1208
Query: 452 ARIGG 456
A GG
Sbjct: 1209 AHDGG 1213
Score = 58.5 bits (140), Expect = 3e-08
Identities = 90/324 (27%), Positives = 107/324 (33%), Gaps = 59/324 (18%)
Query: 122 IGIPRPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPG-GGAGGAGGGRVLECPSIR 180
I +P P P P P AP P ++ P G PG GA G G R
Sbjct: 175 ISVPGPMGPSGPRGLPGPPGAPGPQGFQGPP------GEPGEPGASGPMGPR-------- 220
Query: 181 ITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLS 240
P PP D+ +A G P + PP G G R G G PG
Sbjct: 221 -----GPPGPPGKNGDDGEAGKPGRPGERGPP-GPQGARGLPGTAG------LPGMKGHR 268
Query: 241 SWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPS 300
+S A +A E S A G P P RP P GP+
Sbjct: 269 GFSGLDGAKGDAGPAGPKGEPGSPGENGAP--GQMGPRGLPGERGRPGAP-------GPA 319
Query: 301 PGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEG--S 358
G RG + + PGPT + P P + G A P RGS G +G
Sbjct: 320 -GARGNDGATGAAGPPGPTGPAGPPGFP------GAVGAKGEAGPQ-GPRGSEGPQGVRG 371
Query: 359 EPPPPPPLPLARDPGSPGPFDYVGAPPAESIP--------QKTRRTSSEQAVALP----- 405
EP PP P A G+PG GA A P R S Q P
Sbjct: 372 EPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKG 431
Query: 406 RSEEPASCNGKLPLGAEESVAPPG 429
S EP + K GA+ P G
Sbjct: 432 NSGEPGAPGSKGDTGAKGEPGPVG 455
Score = 53.1 bits (126), Expect = 1e-06
Identities = 107/415 (25%), Positives = 134/415 (32%), Gaps = 73/415 (17%)
Query: 32 PGLS-KPDFPGNSSPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLG 90
PG++ P FPG P P PG G P G+ G + + G + E P+G
Sbjct: 403 PGIAGAPGFPGARGPSGPQG--PGGPPG-PKGNSGEPGAPGSKGDT----GAKGEPGPVG 455
Query: 91 AGGLGEELDSEDAPPCCRLALGEPPPYGAAPIGIPRPPPPR--PGMHSPPPRPAPSPGTW 148
G E R A GEP P G+P PP R PG P +
Sbjct: 456 VQGPPGPAGEEGK----RGARGEP-----GPTGLPGPPGERGGPGSRGFPGADGVAGPKG 506
Query: 149 ESQPARSVRLGGPGGGAGGAGGGRVLECPSIRITSISP-TPEPPAALEDNPDAWGDGSPR 207
+ S GP G G AG P + + SP +P P A DG P
Sbjct: 507 PAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPG 566
Query: 208 DYPPPE--------GFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACD 259
PP GF G + A G+ G A PG A A D
Sbjct: 567 PPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPG-------------AVGPAGKD 613
Query: 260 EVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAPGPT 319
EA ++ G P P+ A R G +GP S PGP
Sbjct: 614 ------GEAGAQ---GPPGPAGPAGER---------------GEQGPAGSPGFQGLPGPA 649
Query: 320 PASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLAR-----DPGS 374
P + G P S A RG GE G + PP P P + G+
Sbjct: 650 GPPGEAGKPGEQGVPGDLGAPGP-SGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGA 708
Query: 375 PGPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEESVAPPG 429
G GAP ++ P A LP + G P GA+ S G
Sbjct: 709 KGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAG--PKGADGSPGKDG 761
Score = 52.8 bits (125), Expect = 2e-06
Identities = 110/425 (25%), Positives = 138/425 (32%), Gaps = 51/425 (12%)
Query: 32 PGLSKPD-FPGN-SSPGLPSSSSPGRDLGAPA--GSMGAASCEDEELEFKLVFGEEKEAP 87
PG P F G PG P +S P G P G G +D E GE
Sbjct: 193 PGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNG----DDGEAGKPGRPGERGPPG 248
Query: 88 PLGAGGLGEELDSEDAPPCCRLALGEPPPYGAAPIGIPRPPPPRPGMHSPPPRPAPSPGT 147
P GA GL + + A P G P+ P PG + P + P
Sbjct: 249 PQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAG-PKGEPGSPGENGAPGQMGP---- 303
Query: 148 WESQPARSVRLGGPG-GGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSP 206
P R G PG GA G G P P P P A+ +A G P
Sbjct: 304 -RGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGP-PGFPGAVGAKGEA-GPQGP 360
Query: 207 RDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELN 266
R P+G G G G A + +PG+ + A A
Sbjct: 361 RGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIA-------------- 406
Query: 267 EAASRFGLGSP-LPSPRASPRPWTPEDPWSLYGPS--PGGRGPEDSWLLLSAPGPTPAS- 322
G+P P R P P P G S PG G + PGP
Sbjct: 407 --------GAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQG 458
Query: 323 -PRPASPCGKRRYSSSGTPSSASPALSRRG---SLGEEGSEPPPPPPLPLARDPGSPGPF 378
P PA GKR P+ RG S G G++ P P A + GSPGP
Sbjct: 459 PPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGP-AGERGSPGPA 517
Query: 379 DYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKL-PLGAEESVAPPG--GSRKEV 435
G+P P + ++ P S P G P G + PPG G+R +
Sbjct: 518 GPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQA 577
Query: 436 AGMDY 440
M +
Sbjct: 578 GVMGF 582
Score = 52.4 bits (124), Expect = 2e-06
Identities = 98/407 (24%), Positives = 122/407 (29%), Gaps = 64/407 (15%)
Query: 41 GNSSPGLPSSS--SPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEEL 98
G++ P P SPG + GAP G MG E G P GA G
Sbjct: 278 GDAGPAGPKGEPGSPGEN-GAP-GQMGPRGLPGER-------GRPGAPGPAGARG----- 323
Query: 99 DSEDAPPCCRLALGEPPPYG-AAPIGIPRPPPPRPGMHSPPPRPAPSPGTWESQPARSVR 157
++ A A G P P G A P G P + PR + P +P
Sbjct: 324 -NDGATG----AAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPP-- 376
Query: 158 LGGPGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGG 217
GP G AG AG P + + +P G P P P+G G
Sbjct: 377 --GPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSG 434
Query: 218 YREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSP 277
A G G PG + E R G P
Sbjct: 435 EPGAPGSKGDTGAKGEPGPVGVQG-------------------PPGPAGEEGKRGARGEP 475
Query: 278 LPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSS 337
P+ P P GP G D P SP PA P G +
Sbjct: 476 GPTGLPGP-------PGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSP--GEA 526
Query: 338 GTPSSAS--PALSRRGSLGEEGSEPPPPPPLPLARD--PGSPGP------FDYVGAPPAE 387
G P A A GS G G + PP P +D PG PGP +G P +
Sbjct: 527 GRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPK 586
Query: 388 SIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEESVAPPGGSRKE 434
+ + P + PA +G+ A P G R E
Sbjct: 587 GAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGE 633
Score = 50.4 bits (119), Expect = 8e-06
Identities = 112/462 (24%), Positives = 139/462 (30%), Gaps = 99/462 (21%)
Query: 38 DFPGNSSPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEE 97
D G P + P G P G++GA + G A P GA G
Sbjct: 831 DAGAKGDAGPPGPAGPAGPPG-PIGNVGAPGAK----------GARGSAGPPGATGF--- 876
Query: 98 LDSEDAPPCCRLALGEPPPYG-AAPIGIPRP--------------PPPRPGMHSPPPRPA 142
P +G P P G A P G P P P RPG PP P
Sbjct: 877 -------PGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPG 929
Query: 143 P-----SPGTWESQPARSVRLGGPGGGAGGAG--------GGRVLECPSIRITSISPTPE 189
P SPG PA + GP G AG G G R P + S P +
Sbjct: 930 PAGEKGSPGA--DGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGF--PGLPGPSGEPGKQ 985
Query: 190 PPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDAS 249
P+ G P P G G A G G SPG+ + +
Sbjct: 986 GPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPP 1045
Query: 250 DEAALYAACDEVESELNEAASRFGLGSPLPSPRASP----RPWTPEDPWS---------- 295
A V ++ R G P+ P P P+ P
Sbjct: 1046 GAPGAPGAPGPV-GPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGD 1104
Query: 296 -----------LYGP-----SPGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGT 339
L GP SPG +GP A GP P S + +G
Sbjct: 1105 RGIKGHRGFSGLQGPPGPPGSPGEQGPS------GASGPAGPRGPPGSAGAPGKDGLNGL 1158
Query: 340 PSSASPA--LSRRGSLGEEGSEPPPPPPLPLARDPGSPG---PFDYVGAPPAESIPQKTR 394
P P R G G G PP PP P PG P F ++ PP E R
Sbjct: 1159 PGPIGPPGPRGRTGDAGPVGPPGPPGPPGP----PGPPSAGFDFSFLPQPPQEKAHDGGR 1214
Query: 395 RTSSEQAVALPRSEEPASCNGKLPLGAEESVAPPGGSRKEVA 436
++ A + + K E++ P GSRK A
Sbjct: 1215 YYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPA 1256
Score = 38.5 bits (88), Expect = 0.031
Identities = 48/176 (27%), Positives = 67/176 (38%), Gaps = 30/176 (17%)
Query: 765 PSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMP-PLYP--QTGPP--- 818
P + P G D + PP P+ P + + P S GF G+P P P + G P
Sbjct: 603 PPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGF-QGLPGPAGPPGEAGKPGEQ 661
Query: 819 ----------PSYRPGLRMFPETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSSFSLGLPF 868
PS G R FP RG G PP P+ P G G+ + G
Sbjct: 662 GVPGDLGAPGPSGARGERGFPGERGVQG---PPG--------PAGPRGANGAPGNDGAKG 710
Query: 869 SPPAPFRPPPLPASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAPEQEKSRG 924
AP P +P L+G P + LP ++ G +G+P ++ RG
Sbjct: 711 DAGAP-GAPGSQGAPGLQG-MPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRG 764
Score = 38.1 bits (87), Expect = 0.040
Identities = 68/269 (25%), Positives = 86/269 (31%), Gaps = 40/269 (14%)
Query: 176 CPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPG 235
CP S SPT + +E G PR P G G G G PG
Sbjct: 92 CPVCPDGSESPTDQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPG 151
Query: 236 SSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSP--LPSPRASPRPWTPEDP 293
L + L DE + G P LP P +P P + P
Sbjct: 152 PPGLG-------GNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGP 204
Query: 294 WSLYGPSPGGRGPEDSWLLLSAPGP-----------TPASPRPASPCGKRRYSSSGTPSS 342
G PG GP PGP P P P G + + G P +
Sbjct: 205 PGEPG-EPGASGPMGP---RGPPGPPGKNGDDGEAGKPGRPGERGPPGPQ--GARGLPGT 258
Query: 343 AS-PAL-SRRGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQ 400
A P + RG G +G++ P P +PGSPG G +P + R
Sbjct: 259 AGLPGMKGHRGFSGLDGAKGDAGPAGPKG-EPGSPGENGAPGQMGPRGLPGERGR----- 312
Query: 401 AVALPRSEEPASCNGKLPLGAEESVAPPG 429
P + PA G GA + PPG
Sbjct: 313 ----PGAPGPAGARGN--DGATGAAGPPG 335
Score = 37.4 bits (85), Expect = 0.068
Identities = 58/228 (25%), Positives = 74/228 (32%), Gaps = 42/228 (18%)
Query: 765 PSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGF-------------------- 804
P P G + PP PP P+ P + P + G
Sbjct: 909 PRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRG 968
Query: 805 GYGMPPLYPQTGPP----PSYRPGLRMFPETRGTTGCAQPPAVSFLP----------RPF 850
G P L +G P PS G R P G G A PP S R
Sbjct: 969 ERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDG 1028
Query: 851 PSDPYGGRGSSFSLGLPFSPPAPFRPPPL-PASPPLE----GPFPSQSDVHPLPAEG-YN 904
G RG + G P +P AP P P+ PA + GP V P+ A G
Sbjct: 1029 SPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAG 1088
Query: 905 KVGPGYGPGEGAPEQEKSRGGYS--SGFRDSVPIQGITLEEGGCGTGG 950
GP GE + ++ G+ SG + G E+G G G
Sbjct: 1089 PQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASG 1136
Score = 34.7 bits (78), Expect = 0.44
Identities = 34/103 (33%), Positives = 37/103 (35%), Gaps = 17/103 (16%)
Query: 807 GMPPLYPQTGPPPSYRPGLRMFPETRGTTGCAQPPAVSFLPR-------PFPSDPYGGRG 859
G L GPP S PG + G G PP + P P P P G RG
Sbjct: 1112 GFSGLQGPPGPPGS--PGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRG 1169
Query: 860 SSFSLGLPFSPPAPFRPPPLPASPPLEG------PFPSQSDVH 896
+ G P PP P PP P PP G P P Q H
Sbjct: 1170 RTGDAG-PVGPPGP-PGPPGPPGPPSAGFDFSFLPQPPQEKAH 1210
Score = 33.1 bits (74), Expect = 1.3
Identities = 48/193 (24%), Positives = 60/193 (31%), Gaps = 59/193 (30%)
Query: 810 PLYPQTGPPPSYRPGLRMFPETRGTTGCAQPPAVSFLP----------RPFPSDPYGGRG 859
P P+ P + RPG P +G TG P RP P P G RG
Sbjct: 516 PAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARG 575
Query: 860 SSFSLGLPF-----------------SPPAPFRP-----------PPLPASPPLEGPFPS 891
+ +G P PP P PP PA GP
Sbjct: 576 QAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPA-----GPAGE 630
Query: 892 QSDVHPLPAEGYNKV-GPGYGPGE-------------GAPEQEKSRGGYSSGFRDSVPIQ 937
+ + P + G+ + GP PGE GAP +RG GF +Q
Sbjct: 631 RGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARG--ERGFPGERGVQ 688
Query: 938 GITLEEGGCGTGG 950
G G G G
Sbjct: 689 GPPGPAGPRGANG 701
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 65.5 bits (158), Expect = 2e-10
Identities = 112/445 (25%), Positives = 146/445 (32%), Gaps = 108/445 (24%)
Query: 39 FPGNSS----PGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGL 94
FPG++ PG + P LG P G G + V PP G G
Sbjct: 910 FPGSAGRVGPPGPAGAPGPAGPLGEP-GKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 968
Query: 95 GEELDSEDAPPCCRLALGEPPPYGAAP----IGIP-----RPPPPRPGMHSPPPRPAPSP 145
G+ ED P G P P G +G+P R P PG P + P+
Sbjct: 969 GDP--GEDGQPGPD---GPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTG 1023
Query: 146 GTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPD---AWG 202
T + P V GP G G G P PE PA + P A G
Sbjct: 1024 ATGDKGPPGPV---GPPGSNGPVG---------------EPGPEGPAGNDGTPGRDGAVG 1065
Query: 203 DGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVE 262
+ R P P G G + A G G +PG +
Sbjct: 1066 ERGDRGDPGPAGLPGSQGAPGTPGPV---GAPGDAG------------------------ 1098
Query: 263 SELNEAASRFGLGSP-LPSPRASPRPWTPEDPWSLYGPS-----------------PGGR 304
+ + SR +G P R P P P +G PG
Sbjct: 1099 -QRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPP 1157
Query: 305 GPEDSWLLLSAPGP--TPASPRPASPCGKRRYSSSGTPSSASPA--LSRRGSLGEEGSEP 360
GP PGP P P P GK G P P RGS+GE G E
Sbjct: 1158 GPNGEQGSAGIPGPFGPRGPPGPVGPSGKE-----GNPGPLGPIGPPGVRGSVGEAGPEG 1212
Query: 361 PPPPPLPLARDPGSPGPFDYVGAPPA-------ESIPQKTRRTSSEQAVALPRSEEPASC 413
PP P P PG PGP ++ A ES+P + +QA +++
Sbjct: 1213 PPGEPGP----PGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTDPGV 1268
Query: 414 NGKL-PLGAE-ESVAPPGGSRKEVA 436
+ L L ++ E++ P GS+K A
Sbjct: 1269 HATLKSLSSQIETMRSPDGSKKHPA 1293
Score = 57.8 bits (138), Expect = 5e-08
Identities = 91/320 (28%), Positives = 108/320 (33%), Gaps = 52/320 (16%)
Query: 87 PPLGAGGLGEELDSED----APPCCRL---ALGEPPPYGAAPIGIPRPPPPRPGMHSPPP 139
PP AG GE+ + PP R + GE P GA P+ P +PG+ P
Sbjct: 805 PPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPG 864
Query: 140 RPAPSPGTWESQPARSVRLGGPGG--GAGGAGGGRVLECP---------SIRITSISPTP 188
P P GP G G G GGR + P + R+ P
Sbjct: 865 EPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAG 924
Query: 189 EP-PAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSD 247
P PA P G R P G G R G GG PG
Sbjct: 925 APGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDG-------QP 977
Query: 248 ASDEAALYAACDEVESELNEAASRFGLGSP-LPSPRASPRPWTPEDPWSLYGPSPGGRGP 306
D A + R G P LP P +P P GP PG GP
Sbjct: 978 GPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGP-PGPVGP 1036
Query: 307 EDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSE-PPPPPP 365
S GP P P P G + GTP R G++GE G P P
Sbjct: 1037 PGS------NGPV-GEPGPEGPAG-----NDGTP-------GRDGAVGERGDRGDPGPAG 1077
Query: 366 LPLARD-PGSPGPFDYVGAP 384
LP ++ PG+PGP VGAP
Sbjct: 1078 LPGSQGAPGTPGP---VGAP 1094
Score = 53.5 bits (127), Expect = 9e-07
Identities = 119/452 (26%), Positives = 148/452 (32%), Gaps = 89/452 (19%)
Query: 36 KPDFPGN-SSPGLPSSSS-PGRD-LGAPAGSMGAASCEDEEL--EFKLVFGEEKEAPPLG 90
+P PG +PG P S PG D L P + A E L + L+ G P G
Sbjct: 163 EPGVPGQPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRG 222
Query: 91 AGGL-GEELDSEDAPPCCRLALGEPPPYGAAPIGI--PRPPPPRPGMHSPPPRPA-PSPG 146
GL G++ + P G+P P G PIG P PP +PG P R P
Sbjct: 223 PQGLQGQQGGAGPTGPPGEP--GDPGPMG--PIGSRGPEGPPGKPGEDGEPGRNGNPGEV 278
Query: 147 TWESQPARSVRLGGPG-GGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGS 205
+ P G PG G G G + LE P + +P + A A G
Sbjct: 279 GFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVG--APGSKGEAGPTGPMGAMGPLG 336
Query: 206 PRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESEL 265
PR P G G + A GQ G PG
Sbjct: 337 PRGMPGERGRLGPQGAPGQRGAHGMPGKPGPM---------------------------- 368
Query: 266 NEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAPGPTPASPRP 325
PL P +S P P GP+ G RGPE GP P
Sbjct: 369 ----------GPLGIPGSSGFPGNPGMKGEA-GPT-GARGPEGPQGQRGETGPPGPVGSP 416
Query: 326 ASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVGAPP 385
P + GTP + P S G+ G GS PP P P GS GP G P
Sbjct: 417 GLP---GAIGTDGTPGAKGPTGS-PGTSGPPGSAGPPGSPGP----QGSTGPQGIRGQPG 468
Query: 386 AESIPQKTRRTSSEQAVALPRSEE-PASCNGKL----------PLGAEESVAPPG--GSR 432
+P + A P+ E P G + P G +V PPG G R
Sbjct: 469 DPGVP-------GFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGER 521
Query: 433 -----KEVAGMDYLAVPSPLAWSKARIGGHSP 459
+ G D L P + +G P
Sbjct: 522 GAPGNRGFPGSDGLPGPKGAQGERGPVGSSGP 553
Score = 53.5 bits (127), Expect = 9e-07
Identities = 112/432 (25%), Positives = 140/432 (32%), Gaps = 77/432 (17%)
Query: 39 FPGNSSPGLPSSSSPG--RDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGE 96
FPG +PGLP + L P G +GA G + EA P G G
Sbjct: 289 FPG--APGLPGLKGHRGHKGLEGPKGEVGAP-------------GSKGEAGPTGPMGAMG 333
Query: 97 ELDSEDAPPCCRLALGEPPPYGAAPIGIPRPPPPRPGMHSPPPRPAPSPGTWESQPARSV 156
L P GE G P+ P + G H P +P P P S
Sbjct: 334 PLGPRGMP-------GERGRLG------PQGAPGQRGAHGMPGKPGPMGPL--GIPGSSG 378
Query: 157 RLGGPG-GGAGGAGGGRVLECPSIRITSISP-----TPEPPAAL--EDNPDAWGD-GSPR 207
G PG G G G R E P + P +P P A+ + P A G GSP
Sbjct: 379 FPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPG 438
Query: 208 DYPPPEGFGGYREAGGQG--GGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEV---- 261
PP G G QG G PG + + + E + +
Sbjct: 439 TSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPG 498
Query: 262 -ESELNEAASRFGLGSPLP-SPRASP--RPWTPEDPWSLYGP--SPGGRGPEDSWLLLSA 315
E + +G P P R +P R + D L GP + G RGP S S
Sbjct: 499 EEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSD--GLPGPKGAQGERGPVGS----SG 552
Query: 316 PGPTPASP-RPASPCGKRRYSSSGTPSSASPA--LSRRGSLGEEGSEPPP---------- 362
P + P RP P +G P P L G+ GE+G PP
Sbjct: 553 PKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPG 612
Query: 363 ----PPPLPLARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALP-RSEEPASCNGKL 417
P P + DPG PG G P P K V P + E
Sbjct: 613 SMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPG 672
Query: 418 PLGAEESVAPPG 429
P G + PPG
Sbjct: 673 PTGFQGLPGPPG 684
Score = 42.4 bits (98), Expect = 0.002
Identities = 89/345 (25%), Positives = 111/345 (32%), Gaps = 50/345 (14%)
Query: 112 GEPPPYGAAPIGIPRPP--PPRPGMHSPPPRPA-PSPG----TWESQPARSVRLGGPGG- 163
G P P G P GI P P +PG PP P+ P P + +Q A G G
Sbjct: 150 GRPGPRG--PQGIDGEPGVPGQPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQ 207
Query: 164 -----GAGGAGGGRVLECPSIRITSISPTPEPPAALEDNP-DAWGDGSPRDYPPPEGFGG 217
G+ G G R + + PT P + P G P P G G
Sbjct: 208 VGLMPGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDG 267
Query: 218 YREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAAL--YAACDEVESELNEAASRFGLG 275
G G F+ SPG+ F A L + +E E +
Sbjct: 268 EPGRNGNPGEVGFAGSPGARG------FPGAPGLPGLKGHRGHKGLEGPKGEVGA----- 316
Query: 276 SPLPSPRASPRPWTPEDPWSLYGP--SPGGR---GPEDSWLLLSAPGPTPASPRPASPCG 330
P + P P GP PG R GP+ + A G P P P P G
Sbjct: 317 ---PGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHG-MPGKPGPMGPLG 372
Query: 331 KRRYSSSGTPSS------ASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVGAP 384
SSG P + A P RG G +G PP P+ PG PG G P
Sbjct: 373 IP--GSSGFPGNPGMKGEAGPT-GARGPEGPQGQRGETGPPGPVG-SPGLPGAIGTDGTP 428
Query: 385 PAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEESVAPPG 429
A+ + + P S P G P G PG
Sbjct: 429 GAKGPTGSPGTSGPPGSAGPPGSPGPQGSTG--PQGIRGQPGDPG 471
Score = 38.5 bits (88), Expect = 0.031
Identities = 86/353 (24%), Positives = 112/353 (31%), Gaps = 62/353 (17%)
Query: 81 GEEKEAPPLGAGG-LGEELD----SEDAPPCCRLALGEPPPYGA----APIGIP----RP 127
G + E P+G+ G G + D E P R G P G P+G P RP
Sbjct: 540 GAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRP 599
Query: 128 PPPRP-GMHSPP-----PRPAPSPGTWESQPARSVRLGGPGG-GAGGAGGGRVLECPSIR 180
PP G+ P P P S G +P + G PG GA G G
Sbjct: 600 GPPGSIGIRGQPGSMGLPGPKGSSGD-PGKPGEAGNAGVPGQRGAPGKDG---------- 648
Query: 181 ITSISPT-PEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSL 239
+ P+ P P L G P + +G G G+GG PG +
Sbjct: 649 --EVGPSGPVGPPGLAGERGEQGPPGPTGF---QGLPGPPGPPGEGG------KPGDQGV 697
Query: 240 SSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGP 299
D A+ E G+ + LP + P+ P GP
Sbjct: 698 PG--------DPGAVGPLGPRGERGNPGERGEPGI-TGLPGEKGMAGGHGPDGPKGSPGP 748
Query: 300 S--PGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEG 357
S PG GP L PG + P + G +A G+ G G
Sbjct: 749 SGTPGDTGPPG---LQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAG----NDGARGLPG 801
Query: 358 SEPPPPPPLPLARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEP 410
PP P P + G PGP VG P + P AV + P
Sbjct: 802 PLGPPGPAGPTG-EKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGP 853
Score = 37.0 bits (84), Expect = 0.089
Identities = 38/122 (31%), Positives = 47/122 (38%), Gaps = 17/122 (13%)
Query: 281 PRASPRPWTPE--DPWSLYGPSPGGRGPEDSWLLLSAPGPTPAS-PRPASPCGKRRYSSS 337
P+ P P P+ D PG GP S PGP S P A G S
Sbjct: 148 PKGRPGPRGPQGIDGEPGVPGQPGAPGPPGH---PSHPGPDGLSRPFSAQMAGLDEKSGL 204
Query: 338 GT-----PSSASPALSR--RGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVGAPPAESIP 390
G+ P S P R +G G++G P PP +PG PGP +G+ E P
Sbjct: 205 GSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTGPP----GEPGDPGPMGPIGSRGPEGPP 260
Query: 391 QK 392
K
Sbjct: 261 GK 262
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 64.7 bits (156), Expect = 4e-10
Identities = 89/377 (23%), Positives = 130/377 (34%), Gaps = 41/377 (10%)
Query: 87 PPLGAGGL------GEELDSEDAPPCCRLALGEPPPYGAAPIGIPRPPPPRPGMHSPPPR 140
PP GGL G PP + L PPP GA PP P+ G+ +PPP+
Sbjct: 1110 PPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPK 1169
Query: 141 PAP-SPGTWESQPARSVRLGGPGGG-------AGGAGGGRVLECPSIRITSISPTPEPPA 192
AP +P P + P G GG P T+ + TP P
Sbjct: 1170 GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK 1229
Query: 193 ALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSW-SFFSDASDE 251
P G + PP GG +G +P+P +++ S + +
Sbjct: 1230 GGLATPSPKGAPTTPAATPPSPKGGPATPPPKG-----APTPPAATPPSLKGGLATPPHK 1284
Query: 252 AALYAACDEVESELNEAASRFGLGSPL------PSPRASPRPWTPE---DPWSLYGPSPG 302
A A S A+ G+P PSP+ SP P+ P ++ PSP
Sbjct: 1285 GAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPK 1344
Query: 303 GRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPP 362
G + S GPT S + S G P+ P+ R ++ +P
Sbjct: 1345 GTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTS 1404
Query: 363 PPPLPLARDPGSPGPFDYVGA---------PPA---ESIPQKTRRTSSEQAVALPRSEEP 410
P +PL+ P GA PPA S+ + ++ + A P S+
Sbjct: 1405 PAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGD 1464
Query: 411 ASCNGKLPLGAEESVAP 427
+ P +E AP
Sbjct: 1465 PTLPAVTPPSPKEPPAP 1481
Score = 61.2 bits (147), Expect = 4e-09
Identities = 102/455 (22%), Positives = 149/455 (32%), Gaps = 61/455 (13%)
Query: 4 TLPSLLPASLASISHRVTNLPSNSLSHNPGLSKPDFPGNSSPGLP----SSSSPGRDLGA 59
T P++ P S S T P + + P + P P S P + ++P L +
Sbjct: 1010 TPPAVTPPSPKG-SPAATPFPKGAST--PPAATPPSPKGSPAATPLPKGAPTTPAATLPS 1066
Query: 60 PAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGG------LGEELDSEDAPPCCRLALGE 113
P G S + PP GG G + PP + L
Sbjct: 1067 PKGGPATPSLKGAPTP-------PAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLAT 1119
Query: 114 PPPYGAAPIGIPRPPPPRPGMHSPPPRPAP-SPGTWESQPARSVRLGGPGGG-------A 165
PP GA PP P+ G+ +PPP+ AP +P P + P G
Sbjct: 1120 PPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATP 1179
Query: 166 GGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQG 225
GG P T+ + TP P P G + PP GG +G
Sbjct: 1180 PSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKG 1239
Query: 226 G---GAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPR 282
A PSP + + A + + + ++ A + +P PSP+
Sbjct: 1240 APTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTP-PSPK 1298
Query: 283 ASPRPWTPE---DPWSLYGPSPGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGT 339
P P+ P + PSP G +PG P P P S GT
Sbjct: 1299 GGPATSPPKGAPTPPAATPPSPKG-----------SPGTPPPKGAPTPP-AVTPPSPKGT 1346
Query: 340 PSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVGAPPA----ESIPQKTRR 395
P+ + S +G S+ P PP G P PP+ +IP
Sbjct: 1347 PTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAM-----TPPSPKRGPAIPSPKGD 1401
Query: 396 TSSEQAVALPRSEEPASCNGKLPLGAEESVAPPGG 430
+S + L + PA+ P+ E + P G
Sbjct: 1402 PTSPAVIPLSPKKAPAT-----PVTREGAATPSKG 1431
Score = 51.2 bits (121), Expect = 5e-06
Identities = 111/446 (24%), Positives = 153/446 (34%), Gaps = 66/446 (14%)
Query: 23 LPSNSLSHNPGLSKPDFPGNSSPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLV--- 79
LP NSLS P + +P P + P P G E +V
Sbjct: 836 LPENSLSFQGSKDSPATTHSPTPPSPKGA-PTPSAVTPLSPKGVTLPPKETPTPSVVNLP 894
Query: 80 FGEEKEAPPLGAGGLGEELDSED-----APPCCRLALGEPPPYGAAPIGIPRPPPPRPGM 134
F +E A P + S A P + P P GA PP P+ G
Sbjct: 895 FPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGP 954
Query: 135 HSPPPRPAPSPGTWESQPARSVRLGGPG-GGAGGAGGGRVLECPSIRITSISPTPE---- 189
+P P+ AP+P + GGP GA PS + +P+P+
Sbjct: 955 ATPSPKWAPTPPAATPPSPK----GGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPT 1010
Query: 190 PPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSP-GSSSLSSWSFFSDA 248
PPA +P GSP P P+ G A PSP GS + + +
Sbjct: 1011 PPAVTPPSP----KGSPAATPFPK--------GASTPPAATPPSPKGSPAATPLPKGAPT 1058
Query: 249 SDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPED---PWSLYGPSP-GGR 304
+ A L + + + A +P PSP+ P +P+ P + PSP GG
Sbjct: 1059 TPAATLPSPKGGPATPSLKGAPTPPAATP-PSPKGGPATPSPKGAPMPPAATPPSPKGGL 1117
Query: 305 GPEDSWLLLSAPGPTPASPRP--ASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPP 362
+ P TP SP+ A+P K + TP++ P S +G L PP
Sbjct: 1118 ATPPHKGAPTTPAATPPSPKGGLATPPPK---GAPTTPAATPP--SPKGGLA-----TPP 1167
Query: 363 PPPLPLARDPGSPGPFDYVGAPPAESIPQKTRRT--SSEQAVALPRSEEPASCNGKLPLG 420
P P P P + P + P T S + +A P S G
Sbjct: 1168 PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATP------SPKGAPTTP 1221
Query: 421 AEESVAPPGGSRKEVAGMDYLAVPSP 446
A +P GG LA PSP
Sbjct: 1222 AATPPSPKGG----------LATPSP 1237
Score = 48.5 bits (114), Expect = 3e-05
Identities = 49/188 (26%), Positives = 65/188 (34%), Gaps = 18/188 (9%)
Query: 748 PVICKEEPLPDSSLRGFPSASATPFGTDMDF---SPPRPPYPSYPHEDPACETPYLSEGF 804
P + P + FP ++TP SP P P PA P S
Sbjct: 1012 PAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLP--SPKG 1069
Query: 805 GYGMPPLYPQTGPPPSYRPGLRMFPETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSSFSL 864
G P L PP + P + P T G PPA + P P GG +
Sbjct: 1070 GPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAAT------PPSPKGGLATPPHK 1123
Query: 865 GLPFSPPAPFRPPPLP----ASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAPEQE 920
G P +P A PP P A+PP +G + + P P G P P A
Sbjct: 1124 GAPTTPAA---TPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPP 1180
Query: 921 KSRGGYSS 928
+GG ++
Sbjct: 1181 SPKGGLAT 1188
Score = 45.8 bits (107), Expect = 2e-04
Identities = 54/188 (28%), Positives = 66/188 (35%), Gaps = 20/188 (10%)
Query: 737 KRSPTQSFRFLPVICKEEPLPDSSLRGFPSASATPFGTDMDFSPPRP------PYPSYPH 790
K +PT S LP KE P + + P+ S T + P P P P
Sbjct: 883 KETPTPSVVNLP-FPKEGPATPAPKQA-PALSMTSSSPKKARATPAPKGIPASPSPKGAP 940
Query: 791 EDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMFPETRGTTGCAQPPAVSFLPRPF 850
PA P G P P PP + P + P T G PPA +
Sbjct: 941 TPPAATPPSPKGGPATPSPKWAPT--PPAATPPSPKGGPATPSPKGAPTPPAAT------ 992
Query: 851 PSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSDVHPLPAEGYNKVGPGY 910
P P GG + G P +PPA PP P P PFP + P K P
Sbjct: 993 PPSPKGGPATPSPKGAP-TPPAV--TPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAA 1049
Query: 911 GP-GEGAP 917
P +GAP
Sbjct: 1050 TPLPKGAP 1057
Score = 42.7 bits (99), Expect = 0.002
Identities = 48/165 (29%), Positives = 59/165 (35%), Gaps = 21/165 (12%)
Query: 762 RGFPSASATPFG--TDMDFSPPRP------PYPSYPHEDPACETPYLSEGFGYGMPPLYP 813
+G P AS +P G T +PP P P P + PA P G P P
Sbjct: 928 KGIP-ASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAP 986
Query: 814 QTGPPPSYRPGLRMFPETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSS-FSLGLPFSPPA 872
PP + P + P T G PPAV+ P P G ++ F G P A
Sbjct: 987 T--PPAATPPSPKGGPATPSPKGAPTPPAVT------PPSPKGSPAATPFPKGASTPPAA 1038
Query: 873 PFRPPPLPASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAP 917
PP P P P P + P K GP +GAP
Sbjct: 1039 T---PPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAP 1080
Score = 42.4 bits (98), Expect = 0.002
Identities = 104/447 (23%), Positives = 144/447 (32%), Gaps = 86/447 (19%)
Query: 33 GLSKPDFPGNSSPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAG 92
GL+ P G +P + + SP G PA S PP GA
Sbjct: 1277 GLATPPHKGAPNPAVVTPPSPK---GGPATS-----------------------PPKGA- 1309
Query: 93 GLGEELDSEDAPPCCRLALGEPPPYGA---------APIGIPRPPPPRPGMHSPPPRPAP 143
PP + + G PPP GA +P G P P P P P+
Sbjct: 1310 ----PTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSS 1365
Query: 144 SPGTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNP----- 198
G S + GGP G + P TS + P P P
Sbjct: 1366 KEGPTPPAATPSHK-GGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREG 1424
Query: 199 ---DAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALY 255
+ GD +P P + +GG A S S G +L + + S A
Sbjct: 1425 AATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPS-SKGDPTLPAVTPPSPKEPPAPKQ 1483
Query: 256 AACDEVESELNEAASRFGLGSP-LPSPRASPRPWTPEDPWSLYGP-----------SPGG 303
A S A+ +G+P LP+ S P P S P +P
Sbjct: 1484 VATSS--SPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPAT 1541
Query: 304 RGPEDSWL--LLSAPGP--TPASPRP----ASPCGKRRYSSSG-TPSSASPALSRRGSL- 353
P+++ + ++ P P TPA P P A+P K S TPS+ A S + L
Sbjct: 1542 LAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLI 1601
Query: 354 --------GEEGSEPPPPPPLPLARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALP 405
+E PP P + P +P P +PP K TS
Sbjct: 1602 PPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKM 1661
Query: 406 RSEEPASCNG----KLPLGAEESVAPP 428
+ P + G K P +E + P
Sbjct: 1662 GATVPQASKGLPAKKGPTALKEVLVAP 1688
Score = 40.8 bits (94), Expect = 0.006
Identities = 55/193 (28%), Positives = 69/193 (35%), Gaps = 32/193 (16%)
Query: 752 KEEPLPDSSLRGFPS---ASATPFGTDMD--FSPPRPP--YPSYPHED----PACETPYL 800
K P P ++ P A+ +P G M +PP P + PH+ PA P
Sbjct: 1077 KGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSP 1136
Query: 801 SEGFGYGMPPLYPQT--GPPPSYRPGLRMFPETRG--TTGCAQPPA------------VS 844
G P P T PPS + GL P +G TT A PP+
Sbjct: 1137 KGGLATPPPKGAPTTPAATPPSPKGGLAT-PPPKGAPTTPAATPPSPKGGLATPSPKGAP 1195
Query: 845 FLPRPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSDVHPLPAEGYN 904
P P P GG + G P +P A PP P L P P + P
Sbjct: 1196 TTPAATPPSPKGGLATPSPKGAPTTPAA---TPPSPKG-GLATPSPKGAPTTPAATPPSP 1251
Query: 905 KVGPGYGPGEGAP 917
K GP P +GAP
Sbjct: 1252 KGGPATPPPKGAP 1264
Score = 40.8 bits (94), Expect = 0.006
Identities = 49/177 (27%), Positives = 63/177 (35%), Gaps = 18/177 (10%)
Query: 757 PDSSLRGFPSASATPFGTDMDFSPPRP------PYPSYPHEDPACETPYLSEGFGYGMPP 810
P S G + S T +PP P P P PA P S G PP
Sbjct: 1202 PPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP--SPKGGPATPP 1259
Query: 811 LYPQTGPPPSYRPGLRMFPETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSSFSLGLPFSP 870
PP + P L+ T G P V+ P P GG +S G P +P
Sbjct: 1260 PKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVT------PPSPKGGPATSPPKGAP-TP 1312
Query: 871 PAPFRPPP--LPASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAPEQEKSRGG 925
PA P P P +PP +G P+ V P +G + +G P S+ G
Sbjct: 1313 PAATPPSPKGSPGTPPPKGA-PTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEG 1368
Score = 37.7 bits (86), Expect = 0.052
Identities = 94/425 (22%), Positives = 138/425 (32%), Gaps = 70/425 (16%)
Query: 4 TLPSLLPASLASISHRVTNLPSNSLSHNPGLSKPDFPGNSSPG---------LPSSSSPG 54
T P++ P SL T+ P + P P + P + +SSSP
Sbjct: 1434 TPPAVTPVSLKKAP--ATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPK 1491
Query: 55 RDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEP 114
+ PA MGA + ++ KE P + + P L L +
Sbjct: 1492 KAPATPA-PMGAPTLP------AVIPSSPKEVPATPSSR------RDPIAPTATL-LSKK 1537
Query: 115 PPYGAAPIGIPRPPP---PRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGAGGG 171
P AP PP P P P P +P T S+ A S P G
Sbjct: 1538 TPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPK 1597
Query: 172 RVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFS 231
+L P++ S P PPA +P+ G +P P S
Sbjct: 1598 ELLIPPAVTSPSPKEAPTPPAVTPPSPEK-GPATPAPKGTPT-----------------S 1639
Query: 232 PSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPE 291
P SSL S S AS + A + L L L +P P
Sbjct: 1640 PPVTPSSLKD-SPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPII-- 1696
Query: 292 DPWSLYGPSPGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPAL--SR 349
+P +GP+ ++P P P P++ G + S+ P+ P S
Sbjct: 1697 -------TAPTRKGPQTKKSSATSP---PICPDPSAKNGSKGPLSTVAPAPLLPVQKDSS 1746
Query: 350 RGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQA----VALP 405
+ + G++ S P P P +P + A E + K S A V+LP
Sbjct: 1747 KTAKGKDASHSPKGPLAPPESKASTP-----LTAAAFEKVLPKPESASVSAAPSPPVSLP 1801
Query: 406 RSEEP 410
+ P
Sbjct: 1802 LAPSP 1806
Score = 33.9 bits (76), Expect = 0.75
Identities = 44/156 (28%), Positives = 53/156 (33%), Gaps = 20/156 (12%)
Query: 755 PLPDSSLRGFPSASATPFGTDMDFSPPRPPYPSYPHED-PACETPYLSEGFGYGMP---P 810
P S +G P+ ++ G P PP + H+ PA P G P P
Sbjct: 1350 PATTPSSKGGPTTPSSKEG-------PTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDP 1402
Query: 811 LYPQTGP-PPSYRPGLRMFPETRGTT--GCAQPPAV---SFLPRPFPSDPYGGRGSSFSL 864
P P P P + E T G PPAV S P S P GG + S
Sbjct: 1403 TSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSK 1462
Query: 865 GLPFSPPAPFRPPPLPASPPLEGPFPSQSDVHPLPA 900
G P P PP P PP + S PA
Sbjct: 1463 G---DPTLPAVTPPSPKEPPAPKQVATSSSPKKAPA 1495
Score = 33.5 bits (75), Expect = 0.98
Identities = 36/137 (26%), Positives = 41/137 (29%), Gaps = 10/137 (7%)
Query: 765 PSASATPFGTDMDFSPPRPPY--PSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYR 822
PS P T P PP P P PA +P G P T P P
Sbjct: 971 PSPKGGP-ATPSPKGAPTPPAATPPSPKGGPATPSPK-------GAPTPPAVTPPSPKGS 1022
Query: 823 PGLRMFPETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPAS 882
P FP+ T A PP+ P P + +L P PA P
Sbjct: 1023 PAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTP 1082
Query: 883 PPLEGPFPSQSDVHPLP 899
P P P P P
Sbjct: 1083 PAATPPSPKGGPATPSP 1099
Score = 30.4 bits (67), Expect = 8.3
Identities = 47/171 (27%), Positives = 58/171 (33%), Gaps = 25/171 (14%)
Query: 779 SPPRP---PYPSYPH--EDPACETPYLSEGFGYGMPPLYPQTGP---PPSYR-------- 822
+PP P P S P P TP +G PP T P PPS +
Sbjct: 1293 TPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPAT 1352
Query: 823 -PGLRMFPET----RGTTGCAQPPAVSFLPRPFPSDPYGGRGSSFSLGLPFSPPA-PFRP 876
P + P T G T A P+ P P P G G P SP P P
Sbjct: 1353 TPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSP 1412
Query: 877 PPLPASPPLE--GPFPSQSDVHPLPAEGYN-KVGPGYGPGEGAPEQEKSRG 924
PA+P PS+ D+ P + K P +G P S+G
Sbjct: 1413 KKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKG 1463
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 63.9 bits (154), Expect = 7e-10
Identities = 114/442 (25%), Positives = 156/442 (35%), Gaps = 67/442 (15%)
Query: 104 PPCCRLALGEPPPYGAAPIGIPR----PPPPRPGMHSPPPR--------PAPSPGTWESQ 151
PP ++ PPP + P P PP + +PPP+ P +P + +
Sbjct: 580 PPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPAS 639
Query: 152 PARSVRLGGPGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPP 211
P S L P A A +L+ P SP P PP +P A SP PP
Sbjct: 640 PPLS-PLATPSPQAPNALAVHLLQAP------FSPPPSPPVQAPFSPPASPPVSPSATPP 692
Query: 212 PEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASR 271
+ Q PSP +S S S + +A A ++ + AS
Sbjct: 693 SQAPPSLAAPPLQ-----VPPSPPASPPMSPS--ATPPPQAPPPLAAPPLQVPPSPPASP 745
Query: 272 FGLGSPLPSPR-----ASPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAPGPTPASPR-P 325
S P PR A+P P P + SP + P + L+ P P A P P
Sbjct: 746 PMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATP-PLQALPSPP 804
Query: 326 ASPCGKRRYSSSGT---------PSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPG 376
AS G+ +S S + P A P L+ L + PP P L R P +PG
Sbjct: 805 ASFPGQAPFSPSASLPMSPLATPPPQAPPVLA--APLLQVPPSPPASPTLQAPRRPPTPG 862
Query: 377 PFDYVGAP-------PAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEESVAPPG 429
P V P P P +S+ L A+ + G + P G
Sbjct: 863 PDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS--GPEG 920
Query: 430 GSRKEVAGMDYLAVPSPLAWSKARIGGHSPI-FRTSALPPLDWPLPSQYEQLELRIEVQP 488
G+ LA P AWS+ G P+ FR + PL WP + + +
Sbjct: 921 GAAASPPPDAELAACHPAAWSR---GPAPPLAFRGAPGAPLPWPPATGPGSADGLCTI-- 975
Query: 489 RAHHRAHYETEGSRGAVKAAPG 510
YETEG A APG
Sbjct: 976 -------YETEGPESAT-PAPG 989
Score = 57.0 bits (136), Expect = 8e-08
Identities = 105/390 (26%), Positives = 132/390 (33%), Gaps = 94/390 (24%)
Query: 4 TLPSLLPASLASISHRVTNLPSNSLSHNPG---------------LSKPDFPGNSSPGLP 48
T PS P SLA+ +V P S +P L P P S P P
Sbjct: 690 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSP 749
Query: 49 SSSSPGRD---LGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAP- 104
S++ P R L AP + L + +APP A + L S A
Sbjct: 750 SATPPPRVPPLLAAPP--LQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASF 807
Query: 105 ------------PCCRLALGEP--PPYGAAPI-GIPRPPPPRPGMHSPPPRPAPSPGTWE 149
P LA P PP AAP+ +P PP P + +P P P P T
Sbjct: 808 PGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSV 867
Query: 150 SQPARSVRLGGPGGGAGGAGGGRVLECPSIRITSISPTPEP---PAALEDNPDAWGDGSP 206
S P ++ L PG P P P P++ PD G S
Sbjct: 868 SGPRLTLAL-APG-----------------------PPPPPSRSPSSTLSGPDLAGHSSS 903
Query: 207 RDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELN 266
PE GY G GGA SP P A AAC
Sbjct: 904 AT-STPEELRGY--DSGPEGGAAASPPPD-----------------AELAACHPAAWSRG 943
Query: 267 EA---ASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAPGPTPASP 323
A A R G+PLP P A+ P + + ++Y GPE + APG P
Sbjct: 944 PAPPLAFRGAPGAPLPWPPAT-GPGSADGLCTIYET----EGPESA---TPAPGALDPGP 995
Query: 324 RPASPCGKRRYSSSGTPSSASPALSRRGSL 353
P + GK + SS SP +R G L
Sbjct: 996 SPGTSGGKAAAGAGAGASSRSPKQARLGEL 1025
Score = 55.5 bits (132), Expect = 2e-07
Identities = 93/361 (25%), Positives = 122/361 (33%), Gaps = 52/361 (14%)
Query: 114 PPPYGAAPIGIPRPPPPRPGM--------HSPPPRPAPSPGTWESQPARSVRLGGPGGGA 165
PP A P+ +P PP P M +PPP AP S PA P
Sbjct: 696 PPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPA------SPPMSP 749
Query: 166 GGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQG 225
RV P + + P PPA+L +P A PPP+ Q
Sbjct: 750 SATPPPRVP--PLLAAPPLQVPPSPPASLPMSPLA--------KPPPQAPPALATPPLQA 799
Query: 226 GGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPL----PSP 281
PSP +S F AS + A + L +PL PSP
Sbjct: 800 -----LPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPV--------LAAPLLQVPPSP 846
Query: 282 RASPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPS 341
ASP P P GP GP + L P P P+ ++ G S + +
Sbjct: 847 PASPTLQAPRRP-PTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSAT 905
Query: 342 SASPALSRRGSLGEEGSEPPPPPPL------PLARDPGSPGPFDYVGAPPAE-SIPQKTR 394
S L S E G+ PPP P A G P + GAP A P T
Sbjct: 906 STPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATG 965
Query: 395 RTSSEQAVALPRSEEPASCNGKLPLGAEESVAPPGGSRKEVAGMDYLAVPSPLAWSKARI 454
S++ + +E P S P + +P K AG A S + +AR+
Sbjct: 966 PGSADGLCTIYETEGPESAT-PAPGALDPGPSPGTSGGKAAAGAG--AGASSRSPKQARL 1022
Query: 455 G 455
G
Sbjct: 1023 G 1023
Score = 51.2 bits (121), Expect = 5e-06
Identities = 115/449 (25%), Positives = 144/449 (32%), Gaps = 90/449 (20%)
Query: 32 PGLSKPDFPGNSSPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGA 91
PGL P PG+ P P + + R LGA AG++G + A
Sbjct: 22 PGLLTPRPPGSPRPPPPVTPAALRVLGA-AGAVGRKPLAER------------------A 62
Query: 92 GGLGEELDSEDAPPCCRLALGEPPPYGAAPIG-IPRPPPPRPGMHSPP-----PRPAPSP 145
GG+G E AP G G + RPP G +PP P P SP
Sbjct: 63 GGIGGATIPESAP-----RAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSP 117
Query: 146 GTWESQPARSVRLGGPG---GGAGGAGGGRVLECP-------SIRITSISPTPEPPA-AL 194
G S R LG G G+ E P R + PTP P+ A+
Sbjct: 118 GR-ASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAM 176
Query: 195 EDNPDAWGD--GSPRDYPP----PEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDA 248
A G G PR P P G + + PSP + S
Sbjct: 177 ARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQR 236
Query: 249 SDEAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGPED 308
+L ++ + S PS R +PR P P P P G
Sbjct: 237 PASRSLSSSATPLSSPARSG----------PSARGTPR--APAHPSQ---PKPKG----- 276
Query: 309 SWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPP---- 364
L P TP A G S TPS + + P PPP
Sbjct: 277 -LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTK-----------ARPVPPPDNAA 324
Query: 365 -PLPLARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEE 423
PLP P P APP+ S P + S A P S+ P S P+ A
Sbjct: 325 TPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPAT--PPSQAPPSMTTP-PMQAPP 381
Query: 424 SV--APPGGSRKEVAGMDYLAVPSPLAWS 450
S+ PP + A PSPLA S
Sbjct: 382 SLQTIPPIQVPHSLTSPSLQAPPSPLALS 410
Score = 50.8 bits (120), Expect = 6e-06
Identities = 55/166 (33%), Positives = 65/166 (39%), Gaps = 35/166 (21%)
Query: 765 PSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPG 824
PS+ ATP PP+ P PA +P L G PPL P PPP P
Sbjct: 584 PSSIATP--------PPQAP--------PALASPPLQ---GLPSPPLSPLATPPPQAPPX 624
Query: 825 LRMFPETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSSFSLGLPFSPP------APFRPPP 878
L + P + A PP +S L P P P + L PFSPP APF PP
Sbjct: 625 LALPPLQAPPSPPASPP-LSPLATPSPQAP--NALAVHLLQAPFSPPPSPPVQAPFSPPA 681
Query: 879 LP-----ASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAPEQ 919
P A+PP + P PS + PL P P P Q
Sbjct: 682 SPPVSPSATPPSQAP-PSLA-APPLQVPPSPPASPPMSPSATPPPQ 725
Score = 42.0 bits (97), Expect = 0.003
Identities = 77/287 (26%), Positives = 97/287 (33%), Gaps = 52/287 (18%)
Query: 168 AGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPE-------GFGGY-- 218
A G P+ R + TP PP GSPR PP G G
Sbjct: 8 AKAGAAARTPAARAPGLL-TPRPP------------GSPRPPPPVTPAALRVLGAAGAVG 54
Query: 219 -----REAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFG 273
AGG GG +P + S A AS G
Sbjct: 55 RKPLAERAGGIGGATIPESAPRAGPTRS--------------AGTSSRNPASRPPASGRG 100
Query: 274 LGSPLPSPRASPRPWT-PEDPWSLYGPSP-GGRGPEDSWLLLSAPGPTPASP-RPASPCG 330
+P P+ SP P + P P P G +G S A G +P R A G
Sbjct: 101 ERAP-PAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAG 159
Query: 331 KRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLARD-PGSPGPFDYVGA----PP 385
RR +S TP + SPA++RR G+E P P P AR P + GP V +
Sbjct: 160 ARRDTSGPTPGTPSPAMARRSRAA--GTEVGLPRPAPSARPRPPTEGPRKSVSSASEHST 217
Query: 386 AESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEESVAPPGGSR 432
E P RR S+ + P S +S L A + G R
Sbjct: 218 TEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPR 264
Score = 40.0 bits (92), Expect = 0.011
Identities = 48/173 (27%), Positives = 58/173 (33%), Gaps = 20/173 (11%)
Query: 756 LPDSSLRGFPSASATPFGTDMDFSPPR---PPY---PSYPHEDPACE--TPYLSEGFGYG 807
L L+G PS +P T +PP PP PS P P TP
Sbjct: 598 LASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALA 657
Query: 808 MPPLYPQTGPPPS------YRPGLRMFPETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSS 861
+ L PPPS + P T PP+++ P P P S
Sbjct: 658 VHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMS 717
Query: 862 FSLGLPFSPPAPFRPPPL------PASPPLEGPFPSQSDVHPLPAEGYNKVGP 908
S P P P PPL PASPP+ V PL A +V P
Sbjct: 718 PSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPP 770
Score = 39.7 bits (91), Expect = 0.014
Identities = 40/140 (28%), Positives = 53/140 (37%), Gaps = 30/140 (21%)
Query: 766 SASATPF------GTDMDFSPPRPPYPSYPHED--PACETPYLSEGFGYGMPPLYPQTGP 817
S+SATP G +P P +PS P A P ++ P L P +
Sbjct: 243 SSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSS 302
Query: 818 PPSYRPGLRMFPETRGTTGCAQPP---AVSFLPRPFPSDPYGGRGSSFSLGLPFSPPAPF 874
P + P GT PP A + LP P P + LP +PP+P
Sbjct: 303 PLAT-------PSPSGTKARPVPPPDNAATPLPATLPPSP------PLATPLPLAPPSPS 349
Query: 875 RPPPL------PASPPLEGP 888
PP L PA+PP + P
Sbjct: 350 APPSLQTLPSPPATPPSQAP 369
Score = 38.5 bits (88), Expect = 0.031
Identities = 131/540 (24%), Positives = 174/540 (32%), Gaps = 95/540 (17%)
Query: 12 SLASISHRVTNLPSNSLSHNP----GLSKPDFPGNSSPGLPSSSSPGRDLGAPAGSMGAA 67
S++S S T PS + P GL +P SS P SS P R + G+ A
Sbjct: 208 SVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSS-PARSGPSARGTPRAP 266
Query: 68 SCEDEE-------LEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEPPPYGAA 120
+ + L V K+A P G L + +P + PP A
Sbjct: 267 AHPSQPKPKGLQALRPPQVTPPRKDAAP-ALGPLSSSPLATPSPSGTKARPVPPPDNAAT 325
Query: 121 PIGIPRPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIR 180
P+ P PP P + +P P PSP S P A + ++ P
Sbjct: 326 PL--PATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPP-S 382
Query: 181 ITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLS 240
+ +I P P + +P SP + Q +F + SP + S
Sbjct: 383 LQTIPPIQVPHSL--TSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQAS 440
Query: 241 SWSFFSDAS---DEAALYA-----ACDEVESELNEAASRFGLGSPLP-------SPRASP 285
S AS D L A A +++ L+ A S L SPL S AS
Sbjct: 441 LTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVS--PLSSPLTIHPLQALSSLASH 498
Query: 286 RPWTPED--------------PWSLYGPSPGGRGPEDSWLLLSAPGP------------- 318
P P P SL P P L AP P
Sbjct: 499 SPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHL 558
Query: 319 -TPASPRPA---SPCGKRRYSSSGTPSS-ASPALSRRGSLGEEGSEPPPPPPL-PLARDP 372
TP P P +P TPSS A+P +L + P PPL PLA P
Sbjct: 559 ETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPP 618
Query: 373 GSPGP---FDYVGAPPAESI-----PQKTRRTSSEQAVALPRSEEPASCNGKLPLGA--- 421
P + APP+ P T + A+A+ + P S P+ A
Sbjct: 619 PQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFS 678
Query: 422 -------EESVAPPGGSRKEVAGMDYLAVPSPLAWSKARIGGHSPIFRTSALPPLDWPLP 474
S PP + +A PSP A SP SA PP P P
Sbjct: 679 PPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPA---------SPPMSPSATPPPQAPPP 729
Score = 38.1 bits (87), Expect = 0.040
Identities = 46/165 (27%), Positives = 57/165 (34%), Gaps = 9/165 (5%)
Query: 755 PLPDSSLRGFPSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLY-- 812
P P +SL P A P +PP PS P P + P+ S M PL
Sbjct: 770 PSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPG-QAPF-SPSASLPMSPLATP 827
Query: 813 PQTGPPPSYRPGLRMFPETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSSFSLGLPFSPPA 872
P PP P L++ P + P P P P G + +L P PP
Sbjct: 828 PPQAPPVLAAPLLQVPPSPPASPTLQAPRRP---PTPGPDTSVSGPRLTLALA-PGPPPP 883
Query: 873 PFRPPPLPASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAP 917
P R P S P S + P GY+ GP G P
Sbjct: 884 PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS-GPEGGAAASPP 927
Score = 37.4 bits (85), Expect = 0.068
Identities = 43/140 (30%), Positives = 54/140 (38%), Gaps = 20/140 (14%)
Query: 755 PLPDSSLRGFPSASATPFGTDMDFSPPR---PPYPSYPHEDPACETPYLSEGFGYGMPPL 811
P P +S PSA+ P +PP P P+ P P+ P +PPL
Sbjct: 708 PSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPR-------VPPL 760
Query: 812 Y--PQTGPPPSYRPGLRMFPETRGTTGCAQPPAVSFLP-RPFPSDPYGGRGSSFSLGLPF 868
P PPS L M P + PPA++ P + PS P +SF PF
Sbjct: 761 LAAPPLQVPPSPPASLPMSPLAKPPPQA--PPALATPPLQALPSPP-----ASFPGQAPF 813
Query: 869 SPPAPFRPPPLPASPPLEGP 888
SP A PL PP P
Sbjct: 814 SPSASLPMSPLATPPPQAPP 833
Score = 36.6 bits (83), Expect = 0.12
Identities = 41/140 (29%), Positives = 49/140 (35%), Gaps = 21/140 (15%)
Query: 778 FSPPRPPYPSYPHEDPACETPYLSEG------FGYGMPPLYPQTGPPPSYRPGLRMFPET 831
FSPP P S P+ P L+ PP+ P PPP P L P
Sbjct: 677 FSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 736
Query: 832 RGTTGCAQPP-AVSFLPRPF-------------PSDPYGGRGSSFSLGLPFSPPAPFRPP 877
+ A PP + S P P PS P S + P +PPA P
Sbjct: 737 VPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPA-LATP 795
Query: 878 PLPASPPLEGPFPSQSDVHP 897
PL A P FP Q+ P
Sbjct: 796 PLQALPSPPASFPGQAPFSP 815
Score = 34.3 bits (77), Expect = 0.58
Identities = 51/181 (28%), Positives = 65/181 (35%), Gaps = 42/181 (23%)
Query: 755 PLPDSSLRGFPSA--SATPFGTDMDFSPPRPP-------YPSYPHEDPACETPYLSEGFG 805
P PD++ P+ + P T + +PP P PS P P+ P ++
Sbjct: 318 PPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPM 377
Query: 806 YGMPPLYPQTGPP---------PSYR--PGLRMFPETRGTTGCAQPPAV---SFLPRPFP 851
P L QT PP PS + P + TT P SFL
Sbjct: 378 QAPPSL--QTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTM--- 432
Query: 852 SDPYGGRGSSFSLGLPFSPPAPFRPP-----PLPASPPLE-------GPFPSQSDVHPLP 899
P + S S P S P P PP LPASPPL+ P S +HPL
Sbjct: 433 -SPRQTQASLTSPSRPASTP-PDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQ 490
Query: 900 A 900
A
Sbjct: 491 A 491
Score = 33.5 bits (75), Expect = 0.98
Identities = 53/231 (22%), Positives = 68/231 (29%), Gaps = 53/231 (22%)
Query: 739 SPTQSFRFLPVICKEEPLPDSSLRGFPSASATPFGTDMDFSPPRPPY---------PSYP 789
SP SF LP S L P + + PP PP P P
Sbjct: 802 SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTP 861
Query: 790 HEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMF-PETRGTTGCAQPPAVSFLPR 848
D + P L+ G PP PPS P + P+ G + A R
Sbjct: 862 GPDTSVSGPRLTLALAPGPPP-------PPSRSPSSTLSGPDLAGHSSSATSTPEEL--R 912
Query: 849 PFPSDPYGG--------------------RGSSFSLGLPFSPPAPFRPPPLPASPPLEG- 887
+ S P GG RG + L +P AP PP +G
Sbjct: 913 GYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGL 972
Query: 888 -------------PFPSQSDVHPLPAEGYNKVGPGYGPGEGAPEQEKSRGG 925
P P D P P K G G G + +++R G
Sbjct: 973 CTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLG 1023
Score = 31.2 bits (69), Expect = 4.9
Identities = 38/137 (27%), Positives = 48/137 (35%), Gaps = 23/137 (16%)
Query: 761 LRGFPSASATPFGTDMDFSPP----RPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTG 816
L P A+ +P GT PP P P+ P TP PL P
Sbjct: 299 LSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPL----------PLAP--- 345
Query: 817 PPPSYRPGLRMFPETRGTTGCAQPPAVSFLPRPFPSD-----PYGGRGSSFSLGLPFSPP 871
P PS P L+ P T PP+++ P P P S S L +PP
Sbjct: 346 PSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQ-APP 404
Query: 872 APFRPPPLPASPPLEGP 888
+P L A+ L P
Sbjct: 405 SPLALSSLQATTSLGSP 421
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 63.5 bits (153), Expect = 9e-10
Identities = 112/425 (26%), Positives = 134/425 (31%), Gaps = 75/425 (17%)
Query: 37 PDFPGNSSP-GLPSSSSPGRDLGAP--AGSMGAASCEDEELEFKLVFGEEKEAPPLGAGG 93
P F G + P G+P P + GAP AG GAA E + G P GG
Sbjct: 488 PGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAG---EPGRDGVPGGPGMRGMPGSPGG 544
Query: 94 LGEELDSEDAPPCCRLALGEP-PPYGAAPIGIPRPPPPRPGMHSPPPRPAPSPGTWESQP 152
G + G+P PP G P PP P P P P + P
Sbjct: 545 PGSD--------------GKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAP 590
Query: 153 ARSVRLGGPGG-------GAGGAGGGRVLECPSIRITSISPT-PEPPAALEDNPDAWG-- 202
++ GGPGG G G G + P+ T P P L+ P G
Sbjct: 591 GKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPP 650
Query: 203 --DGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDAS----DEAALYA 256
+G P + P P+G G A G G A G L+ + E A
Sbjct: 651 GENGKPGE-PGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGA 709
Query: 257 A-------CDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPS----PGGRG 305
A R GLGSP P D GP PG G
Sbjct: 710 AGPPGPPGAAGTPGLQGMPGERGGLGSPGPK----------GDKGEPGGPGADGVPGKDG 759
Query: 306 PEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPP 365
P + PGP P K + G P A P RGS GE G PP P
Sbjct: 760 PRGPTGPIGPPGPA------GQPGDKGEGGAPGLPGIAGP----RGSPGERGETGPPGP- 808
Query: 366 LPLARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEESV 425
A PG+PG G P + P PA G P G +
Sbjct: 809 ---AGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPG--PQGVKGER 863
Query: 426 APPGG 430
PGG
Sbjct: 864 GSPGG 868
Score = 61.6 bits (148), Expect = 3e-09
Identities = 106/371 (28%), Positives = 127/371 (34%), Gaps = 86/371 (23%)
Query: 37 PDFPG-NSSPGLPS-SSSPGRD-LGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGG 93
P PG N +PG P S SPG+D PAG+ GA G + P G G
Sbjct: 881 PGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAP-------------GSPGVSGPKGDAG 927
Query: 94 LGEELDSEDA--PPCCRLALGEPPPYGAAPIGIPRPPPPRPGMHSPPPRPAPSPGTWESQ 151
E S A PP G P P G A I R PGM P P P ES
Sbjct: 928 QPGEKGSPGAQGPP------GAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESG 981
Query: 152 PARSVRLGGPGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPP 211
+ L G G G G P + T+ P + NP + DG P
Sbjct: 982 KPGANGLSGERGPPGPQG------LPGLAGTAGEP------GRDGNPGS--DGLPGRDGS 1027
Query: 212 PEGFGGYREAGGQGG-GAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAAS 270
P G G E G G GA P P + + E+
Sbjct: 1028 PGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGK------------------SGDRGESGP 1069
Query: 271 RFGLGSPLPS-PRASPRPWTPEDPWSLYGP-----------------SPGGRGPEDSWLL 312
G+P P+ R +P P P G +PG GP
Sbjct: 1070 AGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGA 1129
Query: 313 LSAPGPTPASPR----PASPCGKRRYSSSGTPSSASPALSR--RGSLGEEGSEPPPPPPL 366
+ +PGP A PR P+ P GK +SG P P R RG G EGS P P
Sbjct: 1130 IGSPGP--AGPRGPVGPSGPPGKD--GTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPG 1185
Query: 367 PLARDPGSPGP 377
P PG+PGP
Sbjct: 1186 P-PGPPGAPGP 1195
Score = 54.7 bits (130), Expect = 4e-07
Identities = 106/396 (26%), Positives = 131/396 (33%), Gaps = 84/396 (21%)
Query: 32 PGLSKPDFPGNSSP-GLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLG 90
PG++ P PG S P G P + G+P G GAA PP
Sbjct: 839 PGVAGP--PGGSGPAGPPGPQGVKGERGSPGGP-GAAGFPGARGLPGPPGSNGNPGPPGP 895
Query: 91 AGGLGEELDSEDAPPCCRLALGEPPPYGAA-PIGIPRPPPPR--PGMHSPPPRPAPSPGT 147
+G G+ D PP G P G + P G P + PG PP P P G
Sbjct: 896 SGSPGK-----DGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPL-GI 949
Query: 148 WESQPARSVRLGGPGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPR 207
AR L GP G G G SP P+ P A G R
Sbjct: 950 AGITGARG--LAGPPGMPGPRG---------------SPGPQGVKGESGKPGANGLSGER 992
Query: 208 DYPPPEGFGGYREAGGQGGGAFFSPSPGSSSL----SSWSFFSDASDEAALYA------- 256
P P+G G G+ G +PGS L S D + + A
Sbjct: 993 GPPGPQGLPGLAGTAGEPGR---DGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHP 1049
Query: 257 ------ACDEVESELNEAASRFGLGSPLPS-PRASPRPWTPEDPWSLYGP---------- 299
+ E+ G+P P+ R +P P P G
Sbjct: 1050 GPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHR 1109
Query: 300 -------SPGGRGPEDSWLLLSAPGPTPASPR----PASPCGKRRYSSSGTPSSASPALS 348
+PG GP + +PG PA PR P+ P GK +SG P P
Sbjct: 1110 GFPGNPGAPGSPGPAGQQGAIGSPG--PAGPRGPVGPSGPPGKD--GTSGHPGPIGPP-G 1164
Query: 349 RRGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVGAP 384
RG+ GE GSE P PG PGP GAP
Sbjct: 1165 PRGNRGERGSEGSP-------GHPGQPGPPGPPGAP 1193
Score = 52.8 bits (125), Expect = 2e-06
Identities = 88/365 (24%), Positives = 114/365 (31%), Gaps = 81/365 (22%)
Query: 37 PDFPG-NSSPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLG 95
P PG N PG+P PG G+P SC + + + GGL
Sbjct: 114 PGIPGRNGDPGIPGQ--PGSP-GSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLA 170
Query: 96 EELDSEDAPPCCRLALGEPPPYGAAPIGIPRPP--------PPRPGMHSPPPRPAPSPGT 147
G P P G P G P PP P PG PP P + +
Sbjct: 171 ----------------GYPGPAG--PPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPS 212
Query: 148 WESQPARSVRLGGPGGGAGGAGG-GRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSP 206
P ++ GP G G +G GR E P PP G P
Sbjct: 213 GPPGPPGAIGPSGPAGKDGESGRPGRPGE---------RGLPGPP----------GIKGP 253
Query: 207 RDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELN 266
P G G+R G+ G + +PG E+ L
Sbjct: 254 AGIPGFPGMKGHRGFDGRNGEKGETGAPGLKG-----------------------ENGLP 290
Query: 267 EAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAPGPTPASPRPA 326
G P +P RP P + + G RG + PGP + P
Sbjct: 291 GENGAPGPMGPRGAPGERGRPGLPGAAGAR--GNDGARGSDGQ---PGPPGPPGTAGFPG 345
Query: 327 SPCGKRRYSSSGTPSS--ASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVGAP 384
SP K +G+P S A G G G++ PP PP + PG G G P
Sbjct: 346 SPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPP-GINGSPGGKGEMGPAGIP 404
Query: 385 PAESI 389
A +
Sbjct: 405 GAPGL 409
Score = 47.4 bits (111), Expect = 7e-05
Identities = 103/433 (23%), Positives = 132/433 (30%), Gaps = 72/433 (16%)
Query: 44 SPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEE----LD 99
+PGL + + GAP G MG E + P AG G + D
Sbjct: 280 APGLKGENGLPGENGAP-GPMGPRGAPGER---------GRPGLPGAAGARGNDGARGSD 329
Query: 100 SEDAPPCCRLALGEPPPYGAAPIGIPRPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLG 159
+ PP G P GA P P G P P P +
Sbjct: 330 GQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGIN 389
Query: 160 GPGGGAGGAGGGRVLECPSIRITSISPTP---------EPPAALEDNPDAWGDGSPRDYP 210
G GG G G + P + P P A A G+ PR
Sbjct: 390 GSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGER 449
Query: 211 PPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAAS 270
G G A G+ G PG++ L + A A + + E A
Sbjct: 450 GEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRG-PAGPNGIPGEKGPAGE 508
Query: 271 RFGLGSPLPS-PRASP----RPWTPEDPWSLYGP-SPGGRGPEDSWLLLSAPGP------ 318
R G+P P+ PR + R P P P SPGG G + PGP
Sbjct: 509 R---GAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSD------GKPGPPGSQGE 559
Query: 319 --TPASPRPASPCGK----------------RRYSSSGTPSSASPALSRRGSLGEEGSEP 360
P P P+ P G+ + G P P G GE G +
Sbjct: 560 SGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQ-GPPGKNGETGPQG 618
Query: 361 PPPPPLPLA--RDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALPRSE--EPASCNGK 416
PP P P D G PGP G P P + + P+ + P + GK
Sbjct: 619 PPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPG----PKGDAGAPGAPGGK 674
Query: 417 LPLGAEESVAPPG 429
GA PPG
Sbjct: 675 GDAGAPGERGPPG 687
Score = 43.9 bits (102), Expect = 7e-04
Identities = 43/142 (30%), Positives = 54/142 (38%), Gaps = 15/142 (10%)
Query: 258 CDEVESELNEAASRFG-----LGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSWLL 312
CD+ E + FG P +P P P+ P GP PG G +
Sbjct: 67 CDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGP-PGIPGRNGDPGI 125
Query: 313 LSAPGPTPASPRP-----ASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLP 367
PG +P SP P + P G + YS ++ G G G PP PP P
Sbjct: 126 PGQPG-SPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGP 184
Query: 368 --LARDPGSPGPFDYVGAPPAE 387
+ PGSPG Y G PP E
Sbjct: 185 PGTSGHPGSPGSPGYQG-PPGE 205
Score = 43.1 bits (100), Expect = 0.001
Identities = 59/212 (27%), Positives = 75/212 (35%), Gaps = 31/212 (14%)
Query: 174 LECPSIRIT---SISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFF 230
L+CP+ I + P+PP A P+ G P+ P P G G G G
Sbjct: 72 LDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPGS 131
Query: 231 SPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRF----GLGSPLPSPRASPR 286
SPG + S + + + Y + D + + G P P S
Sbjct: 132 PGSPGPPGICE-SCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSGH 190
Query: 287 PWTPEDPWSLYGP--SPGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSAS 344
P +P P GP PG GP PGP P + P+ P GK SG P
Sbjct: 191 PGSPGSP-GYQGPPGEPGQAGPS------GPPGP-PGAIGPSGPAGKD--GESGRP---- 236
Query: 345 PALSRRGSLGEEGSEPPPPPPLPLARDPGSPG 376
G GE G PP P A PG PG
Sbjct: 237 ------GRPGERGLPGPPGIKGP-AGIPGFPG 261
Score = 35.4 bits (80), Expect = 0.26
Identities = 46/147 (31%), Positives = 55/147 (37%), Gaps = 14/147 (9%)
Query: 807 GMPPLYPQTGPP-PSYRPGLRMFPETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSSFSLG 865
G L + GPP P PGL T G G P LP S GG+G G
Sbjct: 984 GANGLSGERGPPGPQGLPGLA---GTAGEPGRDGNPGSDGLPGRDGSP--GGKGDRGENG 1038
Query: 866 LPFSPPAPFRP-PPLPASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAPEQEKSRG 924
P +P AP P PP P P G + + P G PG GAP + RG
Sbjct: 1039 SPGAPGAPGHPGPPGPVGP--AGKSGDRGESGPAGPAG----APGPAGSRGAPGPQGPRG 1092
Query: 925 GY-SSGFRDSVPIQGITLEEGGCGTGG 950
+G R + I+G G G G
Sbjct: 1093 DKGETGERGAAGIKGHRGFPGNPGAPG 1119
Score = 31.6 bits (70), Expect = 3.7
Identities = 59/230 (25%), Positives = 71/230 (30%), Gaps = 39/230 (16%)
Query: 755 PLPDSSLRGFPSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYP- 813
P D G P A P G D P P P P P + EG G+P +
Sbjct: 739 PKGDKGEPGGPGADGVP-GKDGPRGPTGPIGPPGPAGQPGDK----GEGGAPGLPGIAGP 793
Query: 814 --------QTGPPPSY----RPGLRMFPETRGTTGC------AQPPAVSFLPR------- 848
+TGPP PG P +G G PP V+ P
Sbjct: 794 RGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGP 853
Query: 849 PFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSDVHPLPAEGYNKVGP 908
P P G RGS G P A P P ++ P PS S P G
Sbjct: 854 PGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGA 913
Query: 909 GYGPGEGAPEQEKSRGGYSS--------GFRDSVPIQGITLEEGGCGTGG 950
PG P+ + + G G + I GIT G G G
Sbjct: 914 PGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPG 963
Score = 30.8 bits (68), Expect = 6.4
Identities = 47/179 (26%), Positives = 57/179 (31%), Gaps = 40/179 (22%)
Query: 771 PFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMFPE 830
PFG P P P+ P G P P+ P P PG P
Sbjct: 80 PFGECCAVCPQPPTAPTRPPN---------------GQGPQGPKGDPGPPGIPGRNGDPG 124
Query: 831 TRGTTGCAQPPAVSFLPRPFPSDP--YGGRGSSFSL-------GL-----PFSPPAPFRP 876
G G P + P+ P Y + S+ + GL P PP P P
Sbjct: 125 IPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGP 184
Query: 877 PPL------PASPPLEGP--FPSQSDVH--PLPAEGYNKVGPGYGPGE-GAPEQEKSRG 924
P P SP +GP P Q+ P P GP GE G P + RG
Sbjct: 185 PGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERG 243
Score = 30.4 bits (67), Expect = 8.3
Identities = 27/85 (31%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Query: 832 RGTTGCAQPPAVSFLP-RPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFP 890
RG G + PP P P P G RG+ G SP P +P P P P GP
Sbjct: 1139 RGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGP-PGPPGAPGPCC 1197
Query: 891 SQSDVHPLPAEGYNKVGPGYGPGEG 915
+ G K G G+ P G
Sbjct: 1198 GGVGAAAIAGIGGEKAG-GFAPYYG 1221
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
sapiens]
Length = 1650
Score = 63.2 bits (152), Expect = 1e-09
Identities = 116/423 (27%), Positives = 136/423 (32%), Gaps = 92/423 (21%)
Query: 45 PGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAP 104
PG P + PG+D PAG G F E+ P AGG G L + P
Sbjct: 883 PGPPGA--PGKD--GPAGLRG--------------FPGERGLPGT-AGGPG--LKGNEGP 921
Query: 105 PCCRLALGEPPPYGAAPIGIPRPPPPRPGMHSP---------PPRPAPSPGTWESQPARS 155
G P GAA G P PP RPG P P P T
Sbjct: 922 SGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGP 981
Query: 156 VRLGGPGGGAGGAG----GGRVLECPSIRITSIS------PTPEPPAALEDNPDAWG-DG 204
V L GP G G AG G V + P + T + P P P P A G DG
Sbjct: 982 VGLPGPAGPPGVAGEDGDKGEVGD-PGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADG 1040
Query: 205 SPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESE 264
P P FG + G +G F+ PG L E
Sbjct: 1041 EPGARGPQGHFGAKGDEGTRG----FNGPPGPIGLQ----------------GLPGPSGE 1080
Query: 265 LNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPS--PGGRGPEDSWLLLSAPGPTPAS 322
E +G P P P P P P GP PGG G L PG
Sbjct: 1081 KGETGDVGPMGPPGP-----PGPRGPAGPNGADGPQGPPGGVGN------LGPPGEKGEP 1129
Query: 323 PRPASPCGKRRYSSSGTPSSASPALSR--RGSLGEEGSEPPPPPPLPLARD--PGSPGPF 378
SP G P P R +G G+ G PP P P D G+PGP
Sbjct: 1130 GESGSP------GIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPV 1183
Query: 379 DYVG--APPAESIPQKTRRTSSEQA----VALPRSEEPASCNGKL-PLGAEESVAPPGGS 431
+ G PP E P+ ++ P S P NG PLG PG
Sbjct: 1184 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSE 1243
Query: 432 RKE 434
++
Sbjct: 1244 GRQ 1246
Score = 58.2 bits (139), Expect = 4e-08
Identities = 109/433 (25%), Positives = 140/433 (32%), Gaps = 79/433 (18%)
Query: 34 LSKPDFPGNSSPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKL--VFGEEKEAPPLGA 91
+ P PG P P+ + + G++G + E E + GE P G
Sbjct: 1090 MGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGE 1149
Query: 92 GGLGEELDS--EDAPPCCRLALGEPPPYG-AAPIGIPRPPPPRPGMHSP----------- 137
G E E PP + G+ P G P+G P P P PG P
Sbjct: 1150 RGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP-PGEGGPRGQDGAKGDRG 1208
Query: 138 ----PPRPAPSPGTWESQPARSVRLGGPGGGAGGAG--GGRVLECPSIRITSISPT-PEP 190
P +P T E+ P + GP G G G GG+ + I + T P
Sbjct: 1209 EDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVG 1268
Query: 191 PAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASD 250
PA P G R P G G A GQ G PG L +
Sbjct: 1269 PAGPAGKP---GPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKG 1325
Query: 251 EAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSW 310
L E E R LP P+ SP PG GP
Sbjct: 1326 HPGLIGLIGP-PGEQGEKGDR-----GLPGPQGSPGQKGEMG-------IPGASGP---- 1368
Query: 311 LLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLAR 370
PG P P PA P G + + G P GE+G + P
Sbjct: 1369 ---IGPGGPPGLPGPAGPKGAKGATGPGGPK------------GEKGVQGP--------- 1404
Query: 371 DPGSPGPFDYVGAPPAESIPQKTRRTSS-----EQAVALPRSEEPASCNGKLPLGAEESV 425
PG PGP V P +P+KTRR+ ++ A+P P S P G EE
Sbjct: 1405 -PGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLMQEDEAIPTGGAPGS-----PGGLEEIF 1458
Query: 426 APPGGSRKEVAGM 438
R+E+ M
Sbjct: 1459 GSLDSLREEIEQM 1471
Score = 54.3 bits (129), Expect = 5e-07
Identities = 101/390 (25%), Positives = 127/390 (32%), Gaps = 86/390 (22%)
Query: 116 PYGAAPIGIPRPPPPRPG-MHSP----PPRPAPSPGTWES------QPARSVRLGGPGGG 164
P P R P +P +H P P P+PG E P GP G
Sbjct: 236 PQNQQPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGL 295
Query: 165 AGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQ 224
G G VLE P + + P PE PA L P G+ P P G G R G+
Sbjct: 296 KGEKGEPAVLE-PGMLVEG-PPGPEGPAGLIGPPGIQGN------PGPVGDPGERGPPGR 347
Query: 225 GG--GAFFSPS-PGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSP---- 277
G G+ +P PG+S + + F S D+ + AA E +++ +R L P
Sbjct: 348 AGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAA-QEAQAQAILQQARLALRGPPGPM 406
Query: 278 ----LPSPRASP------------RPWTPEDPWSLYGP--------------------SP 301
P P P P P P L GP P
Sbjct: 407 GYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDP 466
Query: 302 GGRGPEDSWLLLSAPGP--------TPASPRPASPCGKR----RYSSSGTPSSASPALSR 349
G +G L PG P P G+R G P + P
Sbjct: 467 GVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGP---- 522
Query: 350 RGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVG-----APPAESIPQKTRRTSSEQAVAL 404
RG LG +G P PP D G GP +G PP + T+ Q
Sbjct: 523 RGLLGPKGPPGIPGPPGVRGMD-GPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIG 581
Query: 405 PRSEEPASCNGKLPLGAEESVAPPGGSRKE 434
P E+ LP G S PPG KE
Sbjct: 582 PHGEKGPQGKPGLP-GMPGSDGPPGHPGKE 610
Score = 40.0 bits (92), Expect = 0.011
Identities = 119/496 (23%), Positives = 149/496 (30%), Gaps = 115/496 (23%)
Query: 31 NPGLSKPDFPGNSSPGLPSSSSPGRDLGA-----PAGSMGAASCEDEELEFKLVFGEE-- 83
+PG+ K D + PGLP D GA P G G +D E+ + + GE
Sbjct: 465 DPGV-KGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERG-DDGEIGPRGLPGESGP 522
Query: 84 -----KEAPPLGAGGLGEE-LDSEDAPPCCRLALGEPPPYGAAPI----GIPRPP----- 128
+ PP G G +D P GEP P G G+P P
Sbjct: 523 RGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGP 582
Query: 129 ------------PPRPGMHSPPPRPAPS--PGTWESQPARSVR--LGGPGG-GAGGAGGG 171
P PG PP P PGT +Q + LG PG G G G
Sbjct: 583 HGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGI 642
Query: 172 RVLE----------CPSIRIT-----SISPTPEPPAALEDNPDA-WGDGSPRDYPPPEGF 215
R L+ P + P + ED P+ G P P P G
Sbjct: 643 RGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGL 702
Query: 216 GGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLG 275
G + G G + G + F AS E ++ R G
Sbjct: 703 MGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLS-------GKSGPRGERG 755
Query: 276 SPLPSPRASPR----------------PWTPEDPWSLYGPS-----PGGRGPEDSWLLLS 314
P + PR P P L GP PG +GP
Sbjct: 756 PTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGP-------- 807
Query: 315 APGPTPASPRPASPCGKR-------RYSSSGTPSSASP--ALSRRGSLGEEGSEPPPPPP 365
PGP P P G+R + G P P A G +GE G PP PP
Sbjct: 808 -PGPPGKDGLPGHP-GQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPP 865
Query: 366 ----LP-------LARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCN 414
LP DPG PG G P + + L +E P+
Sbjct: 866 GEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPP 925
Query: 415 GKLPLGAEESVAPPGG 430
G E A GG
Sbjct: 926 GPAGSPGERGAAGSGG 941
Score = 33.9 bits (76), Expect = 0.75
Identities = 45/157 (28%), Positives = 56/157 (35%), Gaps = 13/157 (8%)
Query: 765 PSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPG 824
P +A G + P PP P P E T G PP P P G
Sbjct: 843 PQGAAGETGPMGERGHPGPPGP--PGEQGLPGTAGKEGTKGDPGPPGAPGKDGPA----G 896
Query: 825 LRMFPETRGTTGCAQPPAVSFLPRPF----PSDPYGGRGSSFSLGLPFSPPAPFRPPPLP 880
LR FP RG G A P + P P+ G RG++ S G P PP P P
Sbjct: 897 LRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGS-GGPIGPPGRPGPQGPP 955
Query: 881 ASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAP 917
+ +G + + P +G GP PG P
Sbjct: 956 GAAGEKGVPGEKGPIGPTGRDGVQ--GPVGLPGPAGP 990
Score = 33.1 bits (74), Expect = 1.3
Identities = 51/208 (24%), Positives = 65/208 (31%), Gaps = 32/208 (15%)
Query: 765 PSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPG 824
PS G PP PP P P + P G + P + P S PG
Sbjct: 1077 PSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPG 1136
Query: 825 LRMFPETRGTTGCAQPPAVSFLP-RPFPSDPY------GGRGSSFSLGLPFSPPAPFRPP 877
++ P +G G S P P P P G +G+ +G P P P
Sbjct: 1137 IQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGG 1196
Query: 878 PL--------------PASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAPEQEKSR 923
P P P GP PL K GP G+P E +
Sbjct: 1197 PRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPL-----GKRGPA-----GSPGSEGRQ 1246
Query: 924 GGY-SSGFRDSVPIQGITLEEGGCGTGG 950
GG + G ++ G T G G G
Sbjct: 1247 GGKGAKGDPGAIGAPGKTGPVGPAGPAG 1274
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo
sapiens]
Length = 1629
Score = 63.2 bits (152), Expect = 1e-09
Identities = 116/423 (27%), Positives = 136/423 (32%), Gaps = 92/423 (21%)
Query: 45 PGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAP 104
PG P + PG+D PAG G F E+ P AGG G L + P
Sbjct: 862 PGPPGA--PGKD--GPAGLRG--------------FPGERGLPGT-AGGPG--LKGNEGP 900
Query: 105 PCCRLALGEPPPYGAAPIGIPRPPPPRPGMHSP---------PPRPAPSPGTWESQPARS 155
G P GAA G P PP RPG P P P T
Sbjct: 901 SGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGP 960
Query: 156 VRLGGPGGGAGGAG----GGRVLECPSIRITSIS------PTPEPPAALEDNPDAWG-DG 204
V L GP G G AG G V + P + T + P P P P A G DG
Sbjct: 961 VGLPGPAGPPGVAGEDGDKGEVGD-PGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADG 1019
Query: 205 SPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESE 264
P P FG + G +G F+ PG L E
Sbjct: 1020 EPGARGPQGHFGAKGDEGTRG----FNGPPGPIGLQ----------------GLPGPSGE 1059
Query: 265 LNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPS--PGGRGPEDSWLLLSAPGPTPAS 322
E +G P P P P P P GP PGG G L PG
Sbjct: 1060 KGETGDVGPMGPPGP-----PGPRGPAGPNGADGPQGPPGGVGN------LGPPGEKGEP 1108
Query: 323 PRPASPCGKRRYSSSGTPSSASPALSR--RGSLGEEGSEPPPPPPLPLARD--PGSPGPF 378
SP G P P R +G G+ G PP P P D G+PGP
Sbjct: 1109 GESGSP------GIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPV 1162
Query: 379 DYVG--APPAESIPQKTRRTSSEQA----VALPRSEEPASCNGKL-PLGAEESVAPPGGS 431
+ G PP E P+ ++ P S P NG PLG PG
Sbjct: 1163 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSE 1222
Query: 432 RKE 434
++
Sbjct: 1223 GRQ 1225
Score = 58.2 bits (139), Expect = 4e-08
Identities = 109/433 (25%), Positives = 140/433 (32%), Gaps = 79/433 (18%)
Query: 34 LSKPDFPGNSSPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKL--VFGEEKEAPPLGA 91
+ P PG P P+ + + G++G + E E + GE P G
Sbjct: 1069 MGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGE 1128
Query: 92 GGLGEELDS--EDAPPCCRLALGEPPPYG-AAPIGIPRPPPPRPGMHSP----------- 137
G E E PP + G+ P G P+G P P P PG P
Sbjct: 1129 RGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP-PGEGGPRGQDGAKGDRG 1187
Query: 138 ----PPRPAPSPGTWESQPARSVRLGGPGGGAGGAG--GGRVLECPSIRITSISPT-PEP 190
P +P T E+ P + GP G G G GG+ + I + T P
Sbjct: 1188 EDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVG 1247
Query: 191 PAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASD 250
PA P G R P G G A GQ G PG L +
Sbjct: 1248 PAGPAGKP---GPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKG 1304
Query: 251 EAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSW 310
L E E R LP P+ SP PG GP
Sbjct: 1305 HPGLIGLIGP-PGEQGEKGDR-----GLPGPQGSPGQKGEMG-------IPGASGP---- 1347
Query: 311 LLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLAR 370
PG P P PA P G + + G P GE+G + P
Sbjct: 1348 ---IGPGGPPGLPGPAGPKGAKGATGPGGPK------------GEKGVQGP--------- 1383
Query: 371 DPGSPGPFDYVGAPPAESIPQKTRRTSS-----EQAVALPRSEEPASCNGKLPLGAEESV 425
PG PGP V P +P+KTRR+ ++ A+P P S P G EE
Sbjct: 1384 -PGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLMQEDEAIPTGGAPGS-----PGGLEEIF 1437
Query: 426 APPGGSRKEVAGM 438
R+E+ M
Sbjct: 1438 GSLDSLREEIEQM 1450
Score = 53.9 bits (128), Expect = 7e-07
Identities = 95/370 (25%), Positives = 123/370 (33%), Gaps = 76/370 (20%)
Query: 125 PRPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIRITSI 184
P+ P SP +P+ +P +S GP G G G VLE P + +
Sbjct: 236 PQNQQPHRAQRSPQQQPSRLHRPQNQEP-QSQAAHGPRGLKGEKGEPAVLE-PGMLVEG- 292
Query: 185 SPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGG--GAFFSPS-PGSSSLSS 241
P PE PA L P G+ P P G G R G+ G G+ +P PG+S +
Sbjct: 293 PPGPEGPAGLIGPPGIQGN------PGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLP 346
Query: 242 WSFFSDASDEAALYAACDEVESELNEAASRFGLGSP--------LPSPRASP-------- 285
+ F S D+ + AA E +++ +R L P P P P
Sbjct: 347 FRFGSGGGDKGPVVAA-QEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGE 405
Query: 286 ----RPWTPEDPWSLYGP--------------------SPGGRGPEDSWLLLSAPGP--- 318
P P P L GP PG +G L PG
Sbjct: 406 SGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGH 465
Query: 319 -----TPASPRPASPCGKR----RYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLA 369
P P G+R G P + P RG LG +G P PP
Sbjct: 466 RGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGP----RGLLGPKGPPGIPGPPGVRG 521
Query: 370 RDPGSPGPFDYVG-----APPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEES 424
D G GP +G PP + T+ Q P E+ LP G S
Sbjct: 522 MD-GPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLP-GMPGS 579
Query: 425 VAPPGGSRKE 434
PPG KE
Sbjct: 580 DGPPGHPGKE 589
Score = 40.0 bits (92), Expect = 0.011
Identities = 119/496 (23%), Positives = 149/496 (30%), Gaps = 115/496 (23%)
Query: 31 NPGLSKPDFPGNSSPGLPSSSSPGRDLGA-----PAGSMGAASCEDEELEFKLVFGEE-- 83
+PG+ K D + PGLP D GA P G G +D E+ + + GE
Sbjct: 444 DPGV-KGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERG-DDGEIGPRGLPGESGP 501
Query: 84 -----KEAPPLGAGGLGEE-LDSEDAPPCCRLALGEPPPYGAAPI----GIPRPP----- 128
+ PP G G +D P GEP P G G+P P
Sbjct: 502 RGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGP 561
Query: 129 ------------PPRPGMHSPPPRPAPS--PGTWESQPARSVR--LGGPGG-GAGGAGGG 171
P PG PP P PGT +Q + LG PG G G G
Sbjct: 562 HGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGI 621
Query: 172 RVLE----------CPSIRIT-----SISPTPEPPAALEDNPDA-WGDGSPRDYPPPEGF 215
R L+ P + P + ED P+ G P P P G
Sbjct: 622 RGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGL 681
Query: 216 GGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLG 275
G + G G + G + F AS E ++ R G
Sbjct: 682 MGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLS-------GKSGPRGERG 734
Query: 276 SPLPSPRASPR----------------PWTPEDPWSLYGPS-----PGGRGPEDSWLLLS 314
P + PR P P L GP PG +GP
Sbjct: 735 PTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGP-------- 786
Query: 315 APGPTPASPRPASPCGKR-------RYSSSGTPSSASP--ALSRRGSLGEEGSEPPPPPP 365
PGP P P G+R + G P P A G +GE G PP PP
Sbjct: 787 -PGPPGKDGLPGHP-GQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPP 844
Query: 366 ----LP-------LARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCN 414
LP DPG PG G P + + L +E P+
Sbjct: 845 GEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPP 904
Query: 415 GKLPLGAEESVAPPGG 430
G E A GG
Sbjct: 905 GPAGSPGERGAAGSGG 920
Score = 33.9 bits (76), Expect = 0.75
Identities = 45/157 (28%), Positives = 56/157 (35%), Gaps = 13/157 (8%)
Query: 765 PSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPG 824
P +A G + P PP P P E T G PP P P G
Sbjct: 822 PQGAAGETGPMGERGHPGPPGP--PGEQGLPGTAGKEGTKGDPGPPGAPGKDGPA----G 875
Query: 825 LRMFPETRGTTGCAQPPAVSFLPRPF----PSDPYGGRGSSFSLGLPFSPPAPFRPPPLP 880
LR FP RG G A P + P P+ G RG++ S G P PP P P
Sbjct: 876 LRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGS-GGPIGPPGRPGPQGPP 934
Query: 881 ASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAP 917
+ +G + + P +G GP PG P
Sbjct: 935 GAAGEKGVPGEKGPIGPTGRDGVQ--GPVGLPGPAGP 969
Score = 33.1 bits (74), Expect = 1.3
Identities = 51/208 (24%), Positives = 65/208 (31%), Gaps = 32/208 (15%)
Query: 765 PSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPG 824
PS G PP PP P P + P G + P + P S PG
Sbjct: 1056 PSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPG 1115
Query: 825 LRMFPETRGTTGCAQPPAVSFLP-RPFPSDPY------GGRGSSFSLGLPFSPPAPFRPP 877
++ P +G G S P P P P G +G+ +G P P P
Sbjct: 1116 IQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGG 1175
Query: 878 PL--------------PASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAPEQEKSR 923
P P P GP PL K GP G+P E +
Sbjct: 1176 PRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPL-----GKRGPA-----GSPGSEGRQ 1225
Query: 924 GGY-SSGFRDSVPIQGITLEEGGCGTGG 950
GG + G ++ G T G G G
Sbjct: 1226 GGKGAKGDPGAIGAPGKTGPVGPAGPAG 1253
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
sapiens]
Length = 1736
Score = 63.2 bits (152), Expect = 1e-09
Identities = 116/423 (27%), Positives = 136/423 (32%), Gaps = 92/423 (21%)
Query: 45 PGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAP 104
PG P + PG+D PAG G F E+ P AGG G L + P
Sbjct: 969 PGPPGA--PGKD--GPAGLRG--------------FPGERGLPGT-AGGPG--LKGNEGP 1007
Query: 105 PCCRLALGEPPPYGAAPIGIPRPPPPRPGMHSP---------PPRPAPSPGTWESQPARS 155
G P GAA G P PP RPG P P P T
Sbjct: 1008 SGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGP 1067
Query: 156 VRLGGPGGGAGGAG----GGRVLECPSIRITSIS------PTPEPPAALEDNPDAWG-DG 204
V L GP G G AG G V + P + T + P P P P A G DG
Sbjct: 1068 VGLPGPAGPPGVAGEDGDKGEVGD-PGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADG 1126
Query: 205 SPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESE 264
P P FG + G +G F+ PG L E
Sbjct: 1127 EPGARGPQGHFGAKGDEGTRG----FNGPPGPIGLQ----------------GLPGPSGE 1166
Query: 265 LNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPS--PGGRGPEDSWLLLSAPGPTPAS 322
E +G P P P P P P GP PGG G L PG
Sbjct: 1167 KGETGDVGPMGPPGP-----PGPRGPAGPNGADGPQGPPGGVGN------LGPPGEKGEP 1215
Query: 323 PRPASPCGKRRYSSSGTPSSASPALSR--RGSLGEEGSEPPPPPPLPLARD--PGSPGPF 378
SP G P P R +G G+ G PP P P D G+PGP
Sbjct: 1216 GESGSP------GIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPV 1269
Query: 379 DYVG--APPAESIPQKTRRTSSEQA----VALPRSEEPASCNGKL-PLGAEESVAPPGGS 431
+ G PP E P+ ++ P S P NG PLG PG
Sbjct: 1270 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSE 1329
Query: 432 RKE 434
++
Sbjct: 1330 GRQ 1332
Score = 58.2 bits (139), Expect = 4e-08
Identities = 109/433 (25%), Positives = 140/433 (32%), Gaps = 79/433 (18%)
Query: 34 LSKPDFPGNSSPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKL--VFGEEKEAPPLGA 91
+ P PG P P+ + + G++G + E E + GE P G
Sbjct: 1176 MGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGE 1235
Query: 92 GGLGEELDS--EDAPPCCRLALGEPPPYG-AAPIGIPRPPPPRPGMHSP----------- 137
G E E PP + G+ P G P+G P P P PG P
Sbjct: 1236 RGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP-PGEGGPRGQDGAKGDRG 1294
Query: 138 ----PPRPAPSPGTWESQPARSVRLGGPGGGAGGAG--GGRVLECPSIRITSISPT-PEP 190
P +P T E+ P + GP G G G GG+ + I + T P
Sbjct: 1295 EDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVG 1354
Query: 191 PAALEDNPDAWGDGSPRDYPPPEGFGGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASD 250
PA P G R P G G A GQ G PG L +
Sbjct: 1355 PAGPAGKP---GPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKG 1411
Query: 251 EAALYAACDEVESELNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSW 310
L E E R LP P+ SP PG GP
Sbjct: 1412 HPGLIGLIGP-PGEQGEKGDR-----GLPGPQGSPGQKGEMG-------IPGASGP---- 1454
Query: 311 LLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLAR 370
PG P P PA P G + + G P GE+G + P
Sbjct: 1455 ---IGPGGPPGLPGPAGPKGAKGATGPGGPK------------GEKGVQGP--------- 1490
Query: 371 DPGSPGPFDYVGAPPAESIPQKTRRTSS-----EQAVALPRSEEPASCNGKLPLGAEESV 425
PG PGP V P +P+KTRR+ ++ A+P P S P G EE
Sbjct: 1491 -PGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLMQEDEAIPTGGAPGS-----PGGLEEIF 1544
Query: 426 APPGGSRKEVAGM 438
R+E+ M
Sbjct: 1545 GSLDSLREEIEQM 1557
Score = 49.3 bits (116), Expect = 2e-05
Identities = 88/335 (26%), Positives = 111/335 (33%), Gaps = 75/335 (22%)
Query: 160 GPGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYR 219
GP G G G VLE P + + P PE PA L P G+ P P G G R
Sbjct: 377 GPRGLKGEKGEPAVLE-PGMLVEG-PPGPEGPAGLIGPPGIQGN------PGPVGDPGER 428
Query: 220 EAGGQGG--GAFFSPS-PGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGS 276
G+ G G+ +P PG+S + + F S D+ + AA E +++ +R L
Sbjct: 429 GPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAA-QEAQAQAILQQARLALRG 487
Query: 277 P--------LPSPRASP------------RPWTPEDPWSLYGP----------------- 299
P P P P P P P L GP
Sbjct: 488 PPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARG 547
Query: 300 ---SPGGRGPEDSWLLLSAPGP--------TPASPRPASPCGKR----RYSSSGTPSSAS 344
PG +G L PG P P G+R G P +
Sbjct: 548 MPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESG 607
Query: 345 PALSRRGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVG-----APPAESIPQKTRRTSSE 399
P RG LG +G P PP D G GP +G PP + T+
Sbjct: 608 P----RGLLGPKGPPGIPGPPGVRGMD-GPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGP 662
Query: 400 QAVALPRSEEPASCNGKLPLGAEESVAPPGGSRKE 434
Q P E+ LP G S PPG KE
Sbjct: 663 QGAIGPHGEKGPQGKPGLP-GMPGSDGPPGHPGKE 696
Score = 40.0 bits (92), Expect = 0.011
Identities = 119/496 (23%), Positives = 149/496 (30%), Gaps = 115/496 (23%)
Query: 31 NPGLSKPDFPGNSSPGLPSSSSPGRDLGA-----PAGSMGAASCEDEELEFKLVFGEE-- 83
+PG+ K D + PGLP D GA P G G +D E+ + + GE
Sbjct: 551 DPGV-KGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERG-DDGEIGPRGLPGESGP 608
Query: 84 -----KEAPPLGAGGLGEE-LDSEDAPPCCRLALGEPPPYGAAPI----GIPRPP----- 128
+ PP G G +D P GEP P G G+P P
Sbjct: 609 RGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGP 668
Query: 129 ------------PPRPGMHSPPPRPAPS--PGTWESQPARSVR--LGGPGG-GAGGAGGG 171
P PG PP P PGT +Q + LG PG G G G
Sbjct: 669 HGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGI 728
Query: 172 RVLE----------CPSIRIT-----SISPTPEPPAALEDNPDA-WGDGSPRDYPPPEGF 215
R L+ P + P + ED P+ G P P P G
Sbjct: 729 RGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGL 788
Query: 216 GGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLG 275
G + G G + G + F AS E ++ R G
Sbjct: 789 MGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLS-------GKSGPRGERG 841
Query: 276 SPLPSPRASPR----------------PWTPEDPWSLYGPS-----PGGRGPEDSWLLLS 314
P + PR P P L GP PG +GP
Sbjct: 842 PTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGP-------- 893
Query: 315 APGPTPASPRPASPCGKR-------RYSSSGTPSSASP--ALSRRGSLGEEGSEPPPPPP 365
PGP P P G+R + G P P A G +GE G PP PP
Sbjct: 894 -PGPPGKDGLPGHP-GQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPP 951
Query: 366 ----LP-------LARDPGSPGPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEEPASCN 414
LP DPG PG G P + + L +E P+
Sbjct: 952 GEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPP 1011
Query: 415 GKLPLGAEESVAPPGG 430
G E A GG
Sbjct: 1012 GPAGSPGERGAAGSGG 1027
Score = 33.9 bits (76), Expect = 0.75
Identities = 45/157 (28%), Positives = 56/157 (35%), Gaps = 13/157 (8%)
Query: 765 PSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPG 824
P +A G + P PP P P E T G PP P P G
Sbjct: 929 PQGAAGETGPMGERGHPGPPGP--PGEQGLPGTAGKEGTKGDPGPPGAPGKDGPA----G 982
Query: 825 LRMFPETRGTTGCAQPPAVSFLPRPF----PSDPYGGRGSSFSLGLPFSPPAPFRPPPLP 880
LR FP RG G A P + P P+ G RG++ S G P PP P P
Sbjct: 983 LRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGS-GGPIGPPGRPGPQGPP 1041
Query: 881 ASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAP 917
+ +G + + P +G GP PG P
Sbjct: 1042 GAAGEKGVPGEKGPIGPTGRDGVQ--GPVGLPGPAGP 1076
Score = 33.1 bits (74), Expect = 1.3
Identities = 51/208 (24%), Positives = 65/208 (31%), Gaps = 32/208 (15%)
Query: 765 PSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPG 824
PS G PP PP P P + P G + P + P S PG
Sbjct: 1163 PSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPG 1222
Query: 825 LRMFPETRGTTGCAQPPAVSFLP-RPFPSDPY------GGRGSSFSLGLPFSPPAPFRPP 877
++ P +G G S P P P P G +G+ +G P P P
Sbjct: 1223 IQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGG 1282
Query: 878 PL--------------PASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAPEQEKSR 923
P P P GP PL K GP G+P E +
Sbjct: 1283 PRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPL-----GKRGPA-----GSPGSEGRQ 1332
Query: 924 GGY-SSGFRDSVPIQGITLEEGGCGTGG 950
GG + G ++ G T G G G
Sbjct: 1333 GGKGAKGDPGAIGAPGKTGPVGPAGPAG 1360
Score = 30.4 bits (67), Expect = 8.3
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 11/96 (11%)
Query: 336 SSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVGAPPAESIPQKTRR 395
S+ T S + A RG GE+G P + + PG GP +G P + P
Sbjct: 365 SAETAHSGAAAHGPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIGPPGIQGNP----- 419
Query: 396 TSSEQAVALPRSEEPASCNGKLPLGAEESVAPPGGS 431
V P P G LP G++ + PPG S
Sbjct: 420 ----GPVGDPGERGPPGRAG-LP-GSDGAPGPPGTS 449
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 62.4 bits (150), Expect = 2e-09
Identities = 93/361 (25%), Positives = 121/361 (33%), Gaps = 80/361 (22%)
Query: 91 AGGLGEELDSEDAPPCCRLALGEP---PPYGA-------APIGIPRPPPPRPGMHSPPPR 140
A L E++ E++P L G P PP G +P G P+ PPP+ G + P
Sbjct: 16 AQNLNEDVSQEESPS---LIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGG--NQPQG 70
Query: 141 PAPSPGTWESQPARSVRLGGPGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDA 200
P P PG + P + G G G+ P S SP P P
Sbjct: 71 PPPPPGKPQGPPPQ-----GGNKPQGPPPPGKPQGPPPQGDKSRSP--RSPPGKPQGPPP 123
Query: 201 WGDGSPRDYPPPEGF-------GGYREAGGQGGGAFFSPSPGSSSLSSWSFFSDASDEAA 253
G P+ PPP G GG + G G P P + S
Sbjct: 124 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSR------------ 171
Query: 254 LYAACDEVESELNEAASRFGLGSPL-PSPRASPRPW-TPEDPWSLYGPSP-GGRGPEDSW 310
+SR G P P P+ +P P P GP P GG P+
Sbjct: 172 ---------------SSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ--- 213
Query: 311 LLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLAR 370
GP P P P G + + S+ SP +G + G++P PPP
Sbjct: 214 ------GPPP----PGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPP----- 258
Query: 371 DPGSP-GPFDYVGAPPAESIPQKTRRTSSEQAVALPRSEE--PASCNGKLPLGAEESVAP 427
PG P GP G P P + Q + RS P G P G + P
Sbjct: 259 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGP 318
Query: 428 P 428
P
Sbjct: 319 P 319
Score = 61.2 bits (147), Expect = 4e-09
Identities = 106/464 (22%), Positives = 148/464 (31%), Gaps = 104/464 (22%)
Query: 1 MITTLPSLLPASLASISHRVTNLPSNSLSHNPGLSKPDFPGNSSPGLPSSSSPGRDLGAP 60
++ ++ L +S +++ V+ S SL P GN G PS PG+ G P
Sbjct: 4 ILLSVALLALSSAQNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSP--PGKPQGPP 61
Query: 61 AGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCCRLALGEPPPYGAA 120
G + + PP G PP G P G
Sbjct: 62 PQG-----------------GNQPQGPPPPPG-------KPQGPP----PQGGNKPQGPP 93
Query: 121 PIGIPRPPPPRPGM----HSPPPRPAPSPGTWESQPARSVRLGGPGGGAGGAGGGRVL-- 174
P G P+ PPP+ SPP +P P +QP G G GG +
Sbjct: 94 PPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 153
Query: 175 ------ECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGF-------GGYREA 221
+ P + + S + P P G P+ PPP G GG +
Sbjct: 154 PPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 213
Query: 222 GGQGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPL-PS 280
G G P P + S ++R G P P
Sbjct: 214 GPPPPGKPQGPPPQGDNKSQ---------------------------SARSPPGKPQGPP 246
Query: 281 PRASPRPW-TPEDPWSLYGPSP-GGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSG 338
P+ +P P P GP P GG P+ GP P P P G S
Sbjct: 247 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQ---------GPPP----PGKPQGPPPQGGSK 293
Query: 339 TPSSASPALSRRGSLGEEGSEPPPPPPLPLA----------RDPGSPGPFDYVGAPPAES 388
+ SS SP +G + G++P PPP P + G P P G PP
Sbjct: 294 SRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGG 353
Query: 389 IPQKTRRTSSEQAVALPRSEEPASCNGKLPLGA--EESVAPPGG 430
++ R+ + P+ E P G ++ APP G
Sbjct: 354 SKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAG 397
Score = 46.6 bits (109), Expect = 1e-04
Identities = 54/171 (31%), Positives = 64/171 (37%), Gaps = 19/171 (11%)
Query: 780 PPRPPYPSYPHEDPACETPYLSEGFGYGMPPL---YPQTGPPPSYRPGLRMFPETRGTTG 836
PP P P D ++ G G PP PQ PPP PG P +G
Sbjct: 217 PPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPP---PGKPQGPPPQGGNK 273
Query: 837 CAQPPAVSFLPRPFPSDPYGGRGSSFSLGLPFSPPA-PFRPPPLPASPPLEGPFPSQSDV 895
PP +P P GG S S SPP P PPP + P +GP P
Sbjct: 274 PQGPPPPG---KPQGPPPQGGSKSRSSR----SPPGKPQGPPPQGGNQP-QGPPPPPGKP 325
Query: 896 HPLPAEGYNKVGPGYGPGEGAPEQEKSRGGYSSGFRDSVP--IQGITLEEG 944
P +G NK P P G P+ +GG S S P QG +EG
Sbjct: 326 QGPPPQGGNK--PQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEG 374
Score = 43.5 bits (101), Expect = 0.001
Identities = 55/190 (28%), Positives = 64/190 (33%), Gaps = 31/190 (16%)
Query: 755 PLPDSSLRGFPSASATPFGTDMDFSPPRPPYPSYPH-EDPACETPYLSEGFGYGMPPL-- 811
P P +G P P G + PP P P P + +P G G PP
Sbjct: 72 PPPPGKPQGPP-----PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGG 126
Query: 812 -YPQTGPPPSYRPGLRMFPETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSSFSLGLPFSP 870
PQ PPP PG P +G PP P P R S G P P
Sbjct: 127 NQPQGPPPP---PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGP 183
Query: 871 P-----APFRPPPLPASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAPEQEKSRGG 925
P P PPP P P +GP P +G NK P P G P+ +G
Sbjct: 184 PPQGGNQPQGPPPPPGKP--QGP----------PPQGGNK--PQGPPPPGKPQGPPPQGD 229
Query: 926 YSSGFRDSVP 935
S S P
Sbjct: 230 NKSQSARSPP 239
Score = 42.7 bits (99), Expect = 0.002
Identities = 47/161 (29%), Positives = 56/161 (34%), Gaps = 19/161 (11%)
Query: 780 PPRPPYPSYPHEDPACETPYLSEGFGYGMPPL---YPQTGPPPSYRPGLRMFPETRGTTG 836
PP P P D + G G PP PQ PPP PG P +G
Sbjct: 155 PPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPP---PGKPQGPPPQGGNK 211
Query: 837 CAQPPAVSFLPRPFPSDPYG--GRGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSD 894
PP P P G +G + S P P PPP + P +GP P
Sbjct: 212 PQGPPP--------PGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQP-QGPPPPPGK 262
Query: 895 VHPLPAEGYNKVGPGYGPGEGAPEQEKSRGGYSSGFRDSVP 935
P +G NK P P G P+ +GG S S P
Sbjct: 263 PQGPPPQGGNK--PQGPPPPGKPQGPPPQGGSKSRSSRSPP 301
Score = 38.5 bits (88), Expect = 0.031
Identities = 49/168 (29%), Positives = 57/168 (33%), Gaps = 20/168 (11%)
Query: 796 ETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMFPETRGTTGCAQPPAVSFLPR------- 848
E+P L G G PP P PG P +G PP P+
Sbjct: 27 ESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG 86
Query: 849 ------PFPSDPYGGRGSSFSLGLPFSPPA-PFRPPPLPASPPLEGPFPSQSDVHPLPAE 901
P P P G P SPP P PPP + P +GP P P +
Sbjct: 87 NKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP-QGPPPPPGKPQGPPPQ 145
Query: 902 GYNKV--GPGYGPGEGAPEQ--EKSRGGYS-SGFRDSVPIQGITLEEG 944
G NK P G +G P Q KSR S G P QG +G
Sbjct: 146 GGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQG 193
Score = 34.7 bits (78), Expect = 0.44
Identities = 48/160 (30%), Positives = 57/160 (35%), Gaps = 19/160 (11%)
Query: 779 SPPRPPYPSYPHEDPACETPYLSEGFGYGMPPL---YPQTGPPPSYRP------GLRMFP 829
SPP P P + P G G PP PQ GPPP +P G
Sbjct: 237 SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ-GPPPPGKPQGPPPQGGSKSR 295
Query: 830 ETRGTTGCAQ--PPAVSFLPR---PFPSDPYGG--RGSSFSLGLPFSPPAPFRPPPLPAS 882
+R G Q PP P+ P P P G +G + G P P P PPP S
Sbjct: 296 SSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP-PPGKPQGPPPQGGS 354
Query: 883 PPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAPEQEKS 922
P P EG N GP P G P+Q ++
Sbjct: 355 KSRSARSPPGKPQGPPQQEGNNPQGPP-PPAGGNPQQPQA 393
Score = 31.6 bits (70), Expect = 3.7
Identities = 36/133 (27%), Positives = 41/133 (30%), Gaps = 13/133 (9%)
Query: 780 PPRPPYPSYPHEDPACETPYLSEGFGYGMPPL---YPQTGPPPSYRPGLRMFPETRGTTG 836
PP P P + G G PP PQ PPP PG P +G
Sbjct: 279 PPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPP---PGKPQGPPPQGGNK 335
Query: 837 CAQPPAVSFLPRPFPSDPYGGRGSSFSLGLPFSPPA-----PFRPPPLPASPPL--EGPF 889
PP P P R + G P PP P PPP P + P
Sbjct: 336 PQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPP 395
Query: 890 PSQSDVHPLPAEG 902
Q P P +G
Sbjct: 396 AGQPQGPPRPPQG 408
Score = 31.2 bits (69), Expect = 4.9
Identities = 38/149 (25%), Positives = 51/149 (34%), Gaps = 26/149 (17%)
Query: 32 PGLSKPDFPGNSSPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGA 91
PG + P S S S PG+ G P G+ + PP G
Sbjct: 280 PGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPP------GKPQGPPPQGG 333
Query: 92 GGLGEELDSEDAPPCCRLALGEPPPYGA------APIGIPRPPPPRPGMH--SPPPRPAP 143
+ PP G PP G+ +P G P+ PP + G + PPP
Sbjct: 334 -------NKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGG 386
Query: 144 SPGTWESQPARSVRLGGPGGGAGGAGGGR 172
+P ++ PA G P G GGR
Sbjct: 387 NPQQPQAPPA-----GQPQGPPRPPQGGR 410
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.135 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,924,847
Number of Sequences: 37866
Number of extensions: 4511754
Number of successful extensions: 49733
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 1974
Number of HSP's that attempted gapping in prelim test: 21871
Number of HSP's gapped (non-prelim): 19020
length of query: 964
length of database: 18,247,518
effective HSP length: 112
effective length of query: 852
effective length of database: 14,006,526
effective search space: 11933560152
effective search space used: 11933560152
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.