Search of human proteins with 209180469

Search of human proteins with 209180469

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|209180469 tumor protein p53 inducible nuclear protein 1
isoform b [Homo sapiens]
         (164 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|209180469 tumor protein p53 inducible nuclear protein 1 isofo...   342   7e-95
gi|15150807 tumor protein p53 inducible nuclear protein 1 isofor...   330   3e-91
gi|39930399 tumor protein p53 inducible nuclear protein 2 [Homo ...    67   7e-12
gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo...    35   0.029
gi|161019170 mucin 5AC [Homo sapiens]                                  34   0.050
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]       34   0.050
gi|121114306 neurogenic differentiation 1 [Homo sapiens]               32   0.32 
gi|24307961 hypothetical protein LOC9675 [Homo sapiens]                32   0.32 
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap...    31   0.42 
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    31   0.55 
gi|51477718 TATA box binding protein-associated factor, RNA poly...    30   0.72 
gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens]         30   0.72 
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]     30   0.72 
gi|38261962 activating transcription factor 7 interacting protei...    30   0.94 
gi|120431745 huntingtin-associated protein 1 isoform 4 [Homo sap...    30   0.94 
gi|120431743 huntingtin-associated protein 1 isoform 3 [Homo sap...    30   0.94 
gi|120431738 huntingtin-associated protein 1 isoform 2 [Homo sap...    30   0.94 
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)...    30   0.94 
gi|57242793 interphotoreceptor matrix proteoglycan 2 [Homo sapiens]    30   0.94 
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]     30   1.2  
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]     30   1.2  
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex...    30   1.2  
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof...    30   1.2  
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof...    30   1.2  
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof...    30   1.2  
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof...    30   1.2  
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof...    30   1.2  
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof...    30   1.2  
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]    29   1.6  
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]    29   1.6  

>gi|209180469 tumor protein p53 inducible nuclear protein 1 isoform
           b [Homo sapiens]
          Length = 164

 Score =  342 bits (878), Expect = 7e-95
 Identities = 164/164 (100%), Positives = 164/164 (100%)

Query: 1   MFQRLNKMFVGEVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPT 60
           MFQRLNKMFVGEVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPT
Sbjct: 1   MFQRLNKMFVGEVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPT 60

Query: 61  EHPSVFSCLPASLECLADTSDSCFLQFESCPMEESWFITPPPCFTAGGLTTIKVETSPME 120
           EHPSVFSCLPASLECLADTSDSCFLQFESCPMEESWFITPPPCFTAGGLTTIKVETSPME
Sbjct: 61  EHPSVFSCLPASLECLADTSDSCFLQFESCPMEESWFITPPPCFTAGGLTTIKVETSPME 120

Query: 121 NLLIEHPSMSVYAVHNSCPGLSEATRGTDELHSPSSPRARKSCL 164
           NLLIEHPSMSVYAVHNSCPGLSEATRGTDELHSPSSPRARKSCL
Sbjct: 121 NLLIEHPSMSVYAVHNSCPGLSEATRGTDELHSPSSPRARKSCL 164


>gi|15150807 tumor protein p53 inducible nuclear protein 1 isoform a
           [Homo sapiens]
          Length = 240

 Score =  330 bits (847), Expect = 3e-91
 Identities = 158/158 (100%), Positives = 158/158 (100%)

Query: 1   MFQRLNKMFVGEVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPT 60
           MFQRLNKMFVGEVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPT
Sbjct: 1   MFQRLNKMFVGEVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPT 60

Query: 61  EHPSVFSCLPASLECLADTSDSCFLQFESCPMEESWFITPPPCFTAGGLTTIKVETSPME 120
           EHPSVFSCLPASLECLADTSDSCFLQFESCPMEESWFITPPPCFTAGGLTTIKVETSPME
Sbjct: 61  EHPSVFSCLPASLECLADTSDSCFLQFESCPMEESWFITPPPCFTAGGLTTIKVETSPME 120

Query: 121 NLLIEHPSMSVYAVHNSCPGLSEATRGTDELHSPSSPR 158
           NLLIEHPSMSVYAVHNSCPGLSEATRGTDELHSPSSPR
Sbjct: 121 NLLIEHPSMSVYAVHNSCPGLSEATRGTDELHSPSSPR 158


>gi|39930399 tumor protein p53 inducible nuclear protein 2 [Homo
           sapiens]
          Length = 220

 Score = 67.0 bits (162), Expect = 7e-12
 Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 35/138 (25%)

Query: 1   MFQRLNKMFVGEVSSSSNQE-PEFNEKEDDE---WILVDFIDTCTGFSAEEEEEEEDISE 56
           MFQRL+ +F    S   + + P     E+DE   W+++D  D+   ++A           
Sbjct: 1   MFQRLSSLFFSTPSPPEDPDCPRAFVSEEDEVDGWLIIDLPDS---YAAPPSPGAAPAPA 57

Query: 57  ESPTEHPSVFSCLPASLECLADTSDSCFLQFESCPMEESWFITPPPCFTAGG--LTTIKV 114
             P   PS+                          M+ESWF+TPP CFTA G  L   ++
Sbjct: 58  GRPPPAPSL--------------------------MDESWFVTPPACFTAEGPGLGPARL 91

Query: 115 ETSPMENLLIEHPSMSVY 132
           ++SP+E+LLIEHPSMSVY
Sbjct: 92  QSSPLEDLLIEHPSMSVY 109


>gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo
           sapiens]
          Length = 1199

 Score = 35.0 bits (79), Expect = 0.029
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)

Query: 12  EVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEE----DISEESPTEHPSVFS 67
           ++SS+++ +P+  E ED E  LVD ++ C      EEEE +     +S  SP+E  ++ S
Sbjct: 494 DISSATDLQPDQAETEDTEEELVDGLEDCCSRDENEEEEGDSECSSLSAVSPSESVAMIS 553


>gi|161019170 mucin 5AC [Homo sapiens]
          Length = 6207

 Score = 34.3 bits (77), Expect = 0.050
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 99   TPPPCFTAGGLTTIKVETS-PMENLLIEHPSMSVYAVHNSCPGLSEA--TRGTDELHSPS 155
            TP P FT G   T+  +T+ PM  +   HPS +    H S    ++A  TR T  + +PS
Sbjct: 3650 TPIPSFTLGTTGTLPEQTTTPMATMSTIHPSSTPETTHTSTVLTTKATTTRATSSMSTPS 3709

Query: 156  S 156
            S
Sbjct: 3710 S 3710


>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
          Length = 5765

 Score = 34.3 bits (77), Expect = 0.050
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 99   TPPPCFTAGGLTTIKVETS-PMENLLIEHPSMSVYAVHNSCPGLSEA--TRGTDELHSPS 155
            TP P FT G   T+  +T+ PM  +   HPS +    H S    ++A  TR T  + +PS
Sbjct: 3070 TPIPSFTLGTTGTLPEQTTTPMATMSTIHPSSTPETTHTSTVLTTKATTTRATSSMSTPS 3129

Query: 156  S 156
            S
Sbjct: 3130 S 3130


>gi|121114306 neurogenic differentiation 1 [Homo sapiens]
          Length = 356

 Score = 31.6 bits (70), Expect = 0.32
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 12 EVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTE 61
          E  SS ++E E ++KEDD   +    D+      EEE+E+ED+ EE   E
Sbjct: 25 ECLSSQDEEHEADKKEDDLEAMNAEEDSLRN-GGEEEDEDEDLEEEEEEE 73


>gi|24307961 hypothetical protein LOC9675 [Homo sapiens]
          Length = 1089

 Score = 31.6 bits (70), Expect = 0.32
 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 12/91 (13%)

Query: 5   LNKMFVGEVSSSSNQEPEFNEK-----EDDEWILVDFI---DTCTG----FSAEEEEEEE 52
           L +  +GE  S  NQ P   EK     ED E  L++++   D   G    F  EEEE+  
Sbjct: 780 LQEQSLGEEGSHLNQRPAALEKSTTTAEDIEQFLLNYLKEKDVADGNVSDFDNEEEEQSV 839

Query: 53  DISEESPTEHPSVFSCLPASLECLADTSDSC 83
               +     P V   LP  ++   D  + C
Sbjct: 840 PPKVDENDTRPDVEPPLPLQIQIAMDVMERC 870


>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
           sapiens]
          Length = 528

 Score = 31.2 bits (69), Expect = 0.42
 Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 14/47 (29%)

Query: 13  VSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESP 59
           V SS  +E E  E+E++E              AEEEEEEED SEE+P
Sbjct: 307 VPSSPTEEEEEEEEEEEE-------------EAEEEEEEED-SEEAP 339


>gi|155030232 proline, glutamic acid and leucine rich protein 1
           [Homo sapiens]
          Length = 1130

 Score = 30.8 bits (68), Expect = 0.55
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 14/49 (28%)

Query: 13  VSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTE 61
           ++SS  +E E  E+E++E               EEEEEEED  EE   E
Sbjct: 883 INSSDEEEEEEEEEEEEE--------------EEEEEEEEDFEEEEEDE 917



 Score = 27.7 bits (60), Expect = 4.6
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 18  NQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTE 61
           ++E  F E+E++E    +  +   G   EEEEEE++  EE   E
Sbjct: 916 DEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEE 959


>gi|51477718 TATA box binding protein-associated factor, RNA
           polymerase II, Q [Homo sapiens]
          Length = 462

 Score = 30.4 bits (67), Expect = 0.72
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 8/56 (14%)

Query: 2   FQRLNKMFVGEVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEE 57
           +  L +MF    S++ + E E +E ED+        D       ++EEEEED SEE
Sbjct: 318 YDMLREMFSDSRSNNDDDEDEDDEDEDE--------DEDEDEDEDKEEEEEDCSEE 365


>gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens]
          Length = 2354

 Score = 30.4 bits (67), Expect = 0.72
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 14  SSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTE 61
           SSS+  E   N     E + +D       FS EEEE+E+ + +E  TE
Sbjct: 62  SSSTQDETHVNTGSSSEVVHLD-----DAFSEEEEEDEDKVEDEDATE 104


>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
          Length = 1312

 Score = 30.4 bits (67), Expect = 0.72
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 10/68 (14%)

Query: 7   KMFVGEVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTEHPSVF 66
           K+   E  + S  E    E EDDE               EEEEEEE+  ++        F
Sbjct: 517 KVEAEEEKAKSGDETNKEEDEDDE----------EAEEEEEEEEEEEDEDDDDNNEEEEF 566

Query: 67  SCLPASLE 74
            C P  ++
Sbjct: 567 ECYPPGMK 574



 Score = 26.9 bits (58), Expect = 7.9
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 7/43 (16%)

Query: 15  SSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEE 57
           SSS++  E  E+EDDE    D        S+EEEEE E   EE
Sbjct: 273 SSSSEAEEEEEEEDDEKEKED-------NSSEEEEEIEPFPEE 308


>gi|38261962 activating transcription factor 7 interacting protein
           [Homo sapiens]
          Length = 1270

 Score = 30.0 bits (66), Expect = 0.94
 Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 7/93 (7%)

Query: 5   LNKMFVGEVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTEHPS 64
           + ++ +GE + SS+ E +  EK +DE    D ++T      E+ + E  +      E   
Sbjct: 376 ITELALGEDAISSSMEIDQGEKNEDE-TSADLVETINENVIEDNKSENILENTDSMETDE 434

Query: 65  VFSCLPASLECLADTSD--SCFLQFESCPMEES 95
           +       LE LA + D  +CF +    P++E+
Sbjct: 435 IIPI----LEKLAPSEDELTCFSKTSLLPIDET 463


>gi|120431745 huntingtin-associated protein 1 isoform 4 [Homo
           sapiens]
          Length = 594

 Score = 30.0 bits (66), Expect = 0.94
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 12/52 (23%)

Query: 12  EVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTEHP 63
           ++ S S++E E  E+E++E              AEEE+EEE+  E+    HP
Sbjct: 254 QLYSDSDEEDEDEEEEEEEK------------EAEEEQEEEEAEEDLQCAHP 293


>gi|120431743 huntingtin-associated protein 1 isoform 3 [Homo
           sapiens]
          Length = 602

 Score = 30.0 bits (66), Expect = 0.94
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 12/52 (23%)

Query: 12  EVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTEHP 63
           ++ S S++E E  E+E++E              AEEE+EEE+  E+    HP
Sbjct: 262 QLYSDSDEEDEDEEEEEEEK------------EAEEEQEEEEAEEDLQCAHP 301


>gi|120431738 huntingtin-associated protein 1 isoform 2 [Homo
           sapiens]
          Length = 619

 Score = 30.0 bits (66), Expect = 0.94
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 12/52 (23%)

Query: 12  EVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTEHP 63
           ++ S S++E E  E+E++E              AEEE+EEE+  E+    HP
Sbjct: 254 QLYSDSDEEDEDEEEEEEEK------------EAEEEQEEEEAEEDLQCAHP 293


>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
            [Homo sapiens]
          Length = 2073

 Score = 30.0 bits (66), Expect = 0.94
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 14/50 (28%)

Query: 12   EVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTE 61
            E+S  S++E E  E E++E               EEEEEEED  EE   E
Sbjct: 1063 ELSKESSEEEEEEEDEEEE--------------EEEEEEEEDEEEEEEEE 1098


>gi|57242793 interphotoreceptor matrix proteoglycan 2 [Homo sapiens]
          Length = 1241

 Score = 30.0 bits (66), Expect = 0.94
 Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 5/94 (5%)

Query: 25  EKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTEHPSVFSCLPASLECLADTSDSCF 84
           E ED + +LVD +D+    S   + E +D S   P E P     +P   +  A+++    
Sbjct: 643 EIEDKKLVLVDKMDSTDQISKHSKYEHDDRSTHFPEEEPLSGPAVPIFADTAAESASLTL 702

Query: 85  -LQFESCPMEESWFITPPPCFTAGGLTTIKVETS 117
                  P  + + +T  P      LT++ +  S
Sbjct: 703 PKHISEVPGVDDYSVTKAPLI----LTSVAISAS 732


>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
          Length = 770

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)

Query: 12  EVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTE 61
           E  S S +E E  E+E++E           G ++EE EEEE+  EE   E
Sbjct: 273 ESGSGSEEEEEEEEEEEEE-----------GSTSEESEEEEEEEEEEEEE 311


>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
          Length = 780

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)

Query: 12  EVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTE 61
           E  S S +E E  E+E++E           G ++EE EEEE+  EE   E
Sbjct: 283 ESGSGSEEEEEEEEEEEEE-----------GSTSEESEEEEEEEEEEEEE 321


>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
           exchanger), member 1 [Homo sapiens]
          Length = 1099

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 19/51 (37%), Positives = 24/51 (47%)

Query: 11  GEVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTE 61
           GE  S         E ++DE  + D   +  G S EEEEEEE+  EE   E
Sbjct: 826 GETESQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEE 876



 Score = 28.9 bits (63), Expect = 2.1
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 13/53 (24%)

Query: 11  GEVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTEHP 63
           G+      +E E  E+E++E               EEEEEEE+  EE   E P
Sbjct: 857 GDSEEEEEEEEEQEEEEEEE-------------EQEEEEEEEEEEEEKGNEEP 896


>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           9 [Homo sapiens]
          Length = 771

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)

Query: 12  EVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTE 61
           E  S S +E E  E+E++E           G ++EE EEEE+  EE   E
Sbjct: 274 ESGSGSEEEEEEEEEEEEE-----------GSTSEESEEEEEEEEEEEEE 312


>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           8 [Homo sapiens]
          Length = 780

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)

Query: 12  EVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTE 61
           E  S S +E E  E+E++E           G ++EE EEEE+  EE   E
Sbjct: 283 ESGSGSEEEEEEEEEEEEE-----------GSTSEESEEEEEEEEEEEEE 321


>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           5 [Homo sapiens]
          Length = 748

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)

Query: 12  EVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTE 61
           E  S S +E E  E+E++E           G ++EE EEEE+  EE   E
Sbjct: 251 ESGSGSEEEEEEEEEEEEE-----------GSTSEESEEEEEEEEEEEEE 289


>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           4 [Homo sapiens]
          Length = 737

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)

Query: 12  EVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTE 61
           E  S S +E E  E+E++E           G ++EE EEEE+  EE   E
Sbjct: 240 ESGSGSEEEEEEEEEEEEE-----------GSTSEESEEEEEEEEEEEEE 278


>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins)
          isoform 3 [Homo sapiens]
          Length = 526

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)

Query: 12 EVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTE 61
          E  S S +E E  E+E++E           G ++EE EEEE+  EE   E
Sbjct: 29 ESGSGSEEEEEEEEEEEEE-----------GSTSEESEEEEEEEEEEEEE 67


>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           2 [Homo sapiens]
          Length = 782

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)

Query: 12  EVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPTE 61
           E  S S +E E  E+E++E           G ++EE EEEE+  EE   E
Sbjct: 285 ESGSGSEEEEEEEEEEEEE-----------GSTSEESEEEEEEEEEEEEE 323


>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
          Length = 2454

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 16/64 (25%)

Query: 3    QRLNKMFVGEVSSS---SNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESP 59
            ++  ++ V E SSS   SN E E  EKE++E               EEEEEEE+  E   
Sbjct: 1385 KKRRRIKVQEDSSSENKSNSEEEEEEKEEEE-------------EEEEEEEEEEEDENDD 1431

Query: 60   TEHP 63
            ++ P
Sbjct: 1432 SKSP 1435


>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
          Length = 2492

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 16/64 (25%)

Query: 3    QRLNKMFVGEVSSS---SNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESP 59
            ++  ++ V E SSS   SN E E  EKE++E               EEEEEEE+  E   
Sbjct: 1423 KKRRRIKVQEDSSSENKSNSEEEEEEKEEEE-------------EEEEEEEEEEEDENDD 1469

Query: 60   TEHP 63
            ++ P
Sbjct: 1470 SKSP 1473


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.128    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,839,016
Number of Sequences: 37866
Number of extensions: 394148
Number of successful extensions: 2988
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 2496
Number of HSP's gapped (non-prelim): 358
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.