Guide to the Human Genome
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Name: KIAA0406 Sequence: fasta or formatted (1089aa) NCBI GI: 24307961
Description:

hypothetical protein LOC9675

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         75           2
 C cysteine            2.4         26           1
 D aspartate           5.1         55           2
 E glutamate           6.8         74           4
 F phenylalanine       3.4         37           2
 G glycine             4.1         45           1
 H histidine           2.9         32           1
 I isoleucine          4.2         46           2
 K lysine              5.4         59           2
 L leucine            16.2        176           3
 M methionine          1.8         20           2
 N asparagine          3.1         34           1
 P proline             4.6         50           2
 Q glutamine           6.5         71           2
 R arginine            3.9         42           2
 S serine              7.0         76           2
 T threonine           4.6         50           3
 V valine              8.0         87           3
 W tryptophan          0.8          9           1
 Y tyrosine            2.3         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC9675 
CHEK1                 0.004   checkpoint kinase 1 
CHEK1                 0.004   checkpoint kinase 1 
CHEK1                 0.004   checkpoint kinase 1 
SPAG6                 0.004   sperm associated antigen 6 isoform 1 
SPAG6                 0.004   sperm associated antigen 6 isoform 2 
RBM28                 0.004   RNA binding motif protein 28 
PNN                   0.003   pinin, desmosome associated protein 
MAP7D2                0.003   MAP7 domain containing 2 
EHBP1                 0.003   EH domain binding protein 1 isoform 3 
EHBP1                 0.003   EH domain binding protein 1 isoform 3 
EHBP1                 0.003   EH domain binding protein 1 isoform 2 
TNPO1                 0.003   transportin 1 isoform 2 
TNPO1                 0.003   transportin 1 isoform 1 
TP53INP1              0.003   tumor protein p53 inducible nuclear protein 1 isofo...
TP53INP1              0.003   tumor protein p53 inducible nuclear protein 1 isofor...
MYT1L                 0.003   myelin transcription factor 1-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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